AlfalfaGEDB | Msa0036610

M. sativa cultivar zhongmu-4 / Msa0036610

KEGG: -
GO: GO:0000156 GO:0000160 GO:0001101 GO:0001763 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009267 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009737 GO:0009755 GO:0009787 GO:0009788 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009933 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010014 GO:0010015 GO:0010016 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010223 GO:0010346 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0016036 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031537 GO:0031667 GO:0031668 GO:0031669 GO:0032101 GO:0032104 GO:0032107 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0035556 GO:0040008 GO:0042221 GO:0042592 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048519 GO:0048523 GO:0048532 GO:0048580 GO:0048583 GO:0048585 GO:0048638 GO:0048646 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051172 GO:0051193 GO:0051239 GO:0051252 GO:0051253 GO:0051716 GO:0055062 GO:0055081 GO:0055083 GO:0060089 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071496 GO:0072505 GO:0072506 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0090506 GO:0090548 GO:0097159 GO:0097305 GO:0098727 GO:0098771 GO:0099402 GO:0140110 GO:1901363 GO:1901401 GO:1901419 GO:1901420 GO:1901463 GO:1901698 GO:1901699 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:1905393 GO:1905957 GO:1905958 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000280 GO:2001141
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0036610	sp\|Q8VZS3\|HHO2_ARATH	47.929	338	126	12	10	326	16	324	1.59e-78	248

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification
Msa0036610	TF	GARP-G2-like

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0036610	Msa0036690	0.955725	1.562080e-113	-8.615850e-47
Msa0036610	Msa0130430	0.956624	1.899079e-114	-8.615850e-47
Msa0036610	Msa0189080	0.801734	7.830435e-49	-8.615850e-47
Msa0036610	Msa0260230	0.818282	2.126529e-52	-8.615850e-47
Msa0036610	Msa0304270	0.823476	1.357215e-53	-8.615850e-47
Msa0036610	Msa0304310	0.809711	1.653039e-50	-8.615850e-47
Msa0036610	Msa0447040	0.801900	7.238512e-49	-8.615850e-47
Msa0036610	Msa0494560	0.823073	1.685360e-53	-8.615850e-47
Msa0036610	Msa1010820	0.833806	4.316300e-56	-8.615850e-47
Msa0036610	Msa1052380	0.816806	4.574326e-52	-8.615850e-47
Msa0036610	Msa1221480	0.809616	1.733131e-50	-8.615850e-47
Msa0036610	Msa1303200	0.801232	9.924559e-49	-8.615850e-47
Msa0036610	Msa1443690	0.956195	5.224111e-114	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0036610	MtrunA17_Chr1g0198601	97.090	378	11	0	1	378	1	378	0.0	764
Msa0036610	MtrunA17_Chr5g0422621	57.368	380	126	14	1	374	10	359	9.88e-126	366
Msa0036610	MtrunA17_Chr4g0062921	35.404	322	144	7	2	294	29	315	1.54e-48	169
Msa0036610	MtrunA17_Chr4g0045361	34.930	355	146	11	10	309	44	368	8.96e-43	154
Msa0036610	MtrunA17_Chr5g0402631	33.636	330	142	12	2	324	56	315	1.81e-33	127
Msa0036610	MtrunA17_Chr2g0291021	56.061	66	29	0	211	276	49	114	1.18e-15	77.4
Msa0036610	MtrunA17_Chr2g0294911	37.008	127	57	4	210	323	210	326	2.42e-15	77.4
Msa0036610	MtrunA17_Chr4g0067981	53.521	71	32	1	210	280	214	283	6.83e-15	76.3
Msa0036610	MtrunA17_Chr2g0304841	38.462	117	63	4	209	323	211	320	7.32e-15	76.3
Msa0036610	MtrunA17_Chr7g0254981	55.385	65	29	0	211	275	50	114	1.18e-14	73.6
Msa0036610	MtrunA17_Chr4g0074411	53.968	63	28	1	209	271	199	260	1.78e-14	75.1
Msa0036610	MtrunA17_Chr1g0161431	48.611	72	36	1	200	271	189	259	3.44e-14	73.9
Msa0036610	MtrunA17_Chr3g0137101	45.679	81	42	2	204	284	191	269	4.23e-14	73.9
Msa0036610	MtrunA17_Chr5g0400241	51.515	66	31	1	204	269	304	368	7.25e-14	72.8
Msa0036610	MtrunA17_Chr5g0417521	61.818	55	21	0	211	265	15	69	9.76e-14	71.6
Msa0036610	MtrunA17_Chr4g0074401	50.000	66	32	1	206	271	198	262	1.04e-13	72.4
Msa0036610	MtrunA17_Chr7g0274471	54.839	62	28	0	211	272	218	279	2.10e-13	71.2
Msa0036610	MtrunA17_Chr4g0054981	41.489	94	51	2	178	268	274	366	2.25e-13	71.6
Msa0036610	MtrunA17_Chr1g0149841	52.381	63	29	1	209	271	189	250	2.44e-13	71.2
Msa0036610	MtrunA17_Chr7g0261911	43.902	82	44	1	211	292	262	341	2.72e-13	70.9
Msa0036610	MtrunA17_Chr2g0290991	60.000	55	22	0	211	265	39	93	6.15e-13	68.9
Msa0036610	MtrunA17_Chr8g0356501	54.545	66	29	1	211	276	37	101	6.47e-13	69.3
Msa0036610	MtrunA17_Chr1g0190301	50.794	63	31	0	211	273	175	237	7.35e-13	69.3
Msa0036610	MtrunA17_Chr4g0031961	43.243	74	41	1	207	280	127	199	8.68e-13	68.6
Msa0036610	MtrunA17_Chr2g0310011	60.000	55	22	0	211	265	35	89	1.14e-12	68.6
Msa0036610	MtrunA17_Chr6g0461641	48.529	68	35	0	211	278	42	109	1.17e-12	68.9
Msa0036610	MtrunA17_Chr4g0042451	58.182	55	23	0	211	265	17	71	1.24e-12	68.2
Msa0036610	MtrunA17_Chr2g0321461	56.364	55	24	0	211	265	45	99	1.32e-12	68.6
Msa0036610	MtrunA17_Chr1g0175091	51.667	60	29	0	211	270	258	317	1.36e-12	68.6
Msa0036610	MtrunA17_Chr7g0255711	40.244	82	45	2	188	269	71	148	1.38e-12	67.8
Msa0036610	MtrunA17_Chr1g0175081	39.744	78	32	1	188	265	14	76	1.44e-12	63.5
Msa0036610	MtrunA17_Chr1g0149831	45.588	68	33	1	209	276	126	189	1.50e-12	66.6
Msa0036610	MtrunA17_Chr7g0275891	42.857	84	36	2	209	280	189	272	1.73e-12	67.8
Msa0036610	MtrunA17_Chr4g0040481	37.895	95	46	2	209	303	156	237	2.83e-12	67.8
Msa0036610	MtrunA17_Chr4g0009901	48.571	70	35	1	200	269	157	225	3.10e-12	66.6
Msa0036610	MtrunA17_Chr1g0197171	58.182	55	23	0	211	265	44	98	3.82e-12	66.2
Msa0036610	MtrunA17_Chr2g0324891	45.070	71	38	1	209	279	159	228	5.67e-12	66.6
Msa0036610	MtrunA17_Chr8g0376881	46.479	71	37	1	210	280	208	277	5.70e-12	67.0
Msa0036610	MtrunA17_Chr5g0409731	50.820	61	28	1	211	269	25	85	1.84e-11	64.3
Msa0036610	MtrunA17_Chr4g0009981	42.857	77	43	1	210	286	115	190	2.23e-11	63.5
Msa0036610	MtrunA17_Chr3g0123131	40.698	86	45	2	200	280	183	267	2.57e-11	65.1
Msa0036610	MtrunA17_Chr6g0473731	43.243	74	41	1	210	283	94	166	3.05e-11	64.7
Msa0036610	MtrunA17_Chr7g0258551	46.269	67	36	0	211	277	212	278	3.87e-11	63.9
Msa0036610	MtrunA17_Chr2g0288601	55.102	49	22	0	213	261	73	121	4.74e-11	60.1
Msa0036610	MtrunA17_Chr4g0009851	40.506	79	46	1	208	286	166	243	7.36e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0036610	AT1G68670.1	47.929	338	126	12	10	326	16	324	1.61e-79	248
Msa0036610	AT1G25550.1	46.386	332	125	11	10	328	20	311	1.69e-77	243
Msa0036610	AT3G25790.1	43.869	367	166	8	10	372	20	350	4.72e-75	237
Msa0036610	AT1G13300.1	43.207	368	148	12	11	368	20	336	5.72e-71	226
Msa0036610	AT1G25550.2	49.231	260	104	8	10	261	20	259	1.16e-66	213
Msa0036610	AT3G25790.2	46.457	254	109	4	9	261	19	246	1.74e-56	186
Msa0036610	AT2G03500.1	35.802	324	126	9	8	294	36	314	1.83e-48	170
Msa0036610	AT4G37180.1	33.935	277	109	8	11	269	48	268	3.05e-33	127
Msa0036610	AT4G37180.2	33.574	277	117	8	11	269	48	275	1.40e-30	120
Msa0036610	AT1G49560.1	32.542	295	132	9	10	293	30	268	4.60e-30	118
Msa0036610	AT4G37180.3	33.086	269	106	8	11	261	48	260	1.39e-28	113
Msa0036610	AT1G49560.2	31.939	263	118	8	10	261	30	242	3.69e-23	97.8
Msa0036610	AT2G01060.1	57.812	64	27	0	211	274	15	78	2.07e-15	76.3
Msa0036610	AT3G16857.3	35.252	139	79	3	199	336	155	283	8.52e-15	76.3
Msa0036610	AT3G16857.2	34.752	141	81	3	199	338	225	355	9.86e-15	76.3
Msa0036610	AT3G16857.1	34.752	141	81	3	199	338	225	355	1.03e-14	76.3
Msa0036610	AT5G58080.1	50.000	66	32	1	204	269	187	251	4.19e-14	74.3
Msa0036610	AT3G04030.1	53.846	65	30	0	211	275	45	109	9.04e-14	72.4
Msa0036610	AT3G04030.3	53.846	65	30	0	211	275	45	109	1.06e-13	72.4
Msa0036610	AT2G25180.1	31.902	163	94	5	209	356	193	353	1.14e-13	72.8
Msa0036610	AT5G05090.1	45.570	79	41	2	192	269	61	138	1.77e-13	70.5
Msa0036610	AT5G06800.3	53.226	62	29	0	211	272	192	253	2.79e-13	70.1
Msa0036610	AT5G18240.2	58.182	55	23	0	211	265	45	99	3.68e-13	70.9
Msa0036610	AT5G18240.3	58.182	55	23	0	211	265	45	99	3.68e-13	70.9
Msa0036610	AT5G18240.5	58.182	55	23	0	211	265	45	99	4.06e-13	70.5
Msa0036610	AT5G18240.1	58.182	55	23	0	211	265	45	99	4.17e-13	70.5
Msa0036610	AT5G18240.4	58.182	55	23	0	211	265	45	99	4.17e-13	70.5
Msa0036610	AT2G01760.3	44.156	77	42	1	210	286	134	209	5.02e-13	69.7
Msa0036610	AT5G44190.2	43.750	80	44	1	200	279	136	214	6.05e-13	69.7
Msa0036610	AT5G44190.1	43.750	80	44	1	200	279	136	214	6.93e-13	69.7
Msa0036610	AT2G01760.2	46.575	73	38	1	210	282	227	298	6.94e-13	70.1
Msa0036610	AT2G01760.1	44.156	77	42	1	210	286	199	274	7.52e-13	69.7
Msa0036610	AT5G06800.1	53.226	62	29	0	211	272	192	253	1.00e-12	69.3
Msa0036610	AT5G06800.2	53.226	62	29	0	211	272	192	253	1.05e-12	69.3
Msa0036610	AT3G10760.1	44.444	81	43	2	190	269	83	162	1.06e-12	68.9
Msa0036610	AT2G40970.1	45.070	71	38	1	199	269	93	162	1.10e-12	67.8
Msa0036610	AT3G46640.3	33.113	151	92	4	134	276	59	208	1.47e-12	68.6
Msa0036610	AT3G46640.2	46.269	67	35	1	210	276	143	208	1.51e-12	68.2
Msa0036610	AT3G46640.1	46.269	67	35	1	210	276	143	208	1.51e-12	68.2
Msa0036610	AT5G45580.2	44.595	74	41	0	211	284	23	96	1.52e-12	67.8
Msa0036610	AT1G79430.2	60.000	55	22	0	211	265	34	88	1.58e-12	68.6
Msa0036610	AT5G45580.1	44.595	74	41	0	211	284	7	80	1.59e-12	67.4
Msa0036610	AT3G04450.3	51.667	60	29	0	211	270	238	297	1.67e-12	68.2
Msa0036610	AT5G59570.2	38.318	107	64	2	163	269	94	198	2.20e-12	67.8
Msa0036610	AT5G59570.1	38.318	107	64	2	163	269	94	198	2.20e-12	67.8
Msa0036610	AT3G24120.1	58.182	55	23	0	211	265	41	95	2.30e-12	67.4
Msa0036610	AT5G29000.4	49.206	63	32	0	211	273	231	293	2.47e-12	67.4
Msa0036610	AT4G13640.2	58.182	55	23	0	211	265	37	91	2.60e-12	67.4
Msa0036610	AT3G24120.2	58.182	55	23	0	211	265	41	95	2.64e-12	67.4
Msa0036610	AT4G13640.1	58.182	55	23	0	211	265	37	91	2.73e-12	67.4
Msa0036610	AT3G13040.3	52.459	61	29	0	210	270	240	300	3.02e-12	68.2
Msa0036610	AT3G13040.1	52.459	61	29	0	210	270	240	300	3.02e-12	68.2
Msa0036610	AT3G13040.2	52.459	61	29	0	210	270	240	300	3.02e-12	68.2
Msa0036610	AT3G04450.1	51.667	60	29	0	211	270	238	297	3.21e-12	68.2
Msa0036610	AT3G04450.4	51.667	60	29	0	211	270	198	257	3.71e-12	67.8
Msa0036610	AT3G04450.2	51.667	60	29	0	211	270	198	257	3.71e-12	67.8
Msa0036610	AT2G20570.1	47.945	73	37	1	207	279	149	220	4.22e-12	67.8
Msa0036610	AT3G04030.2	52.308	65	30	1	211	275	45	108	5.80e-12	67.0
Msa0036610	AT5G29000.2	49.206	63	32	0	211	273	231	293	5.83e-12	67.0
Msa0036610	AT5G29000.1	49.206	63	32	0	211	273	188	250	6.16e-12	67.0
Msa0036610	AT5G29000.3	49.206	63	32	0	211	273	188	250	6.16e-12	67.0
Msa0036610	AT4G28610.1	51.667	60	29	0	211	270	225	284	6.71e-12	67.0
Msa0036610	AT3G12730.1	56.364	55	24	0	211	265	23	77	7.60e-12	65.1
Msa0036610	AT2G42660.1	52.632	57	27	0	216	272	55	111	1.06e-11	65.1
Msa0036610	AT2G38300.1	51.923	52	25	0	213	264	56	107	1.83e-11	65.1
Msa0036610	AT4G31920.1	42.105	76	43	1	204	279	176	250	2.34e-11	65.5
Msa0036610	AT2G06020.1	50.909	55	27	0	211	265	86	140	2.57e-11	64.3
Msa0036610	AT1G49190.1	36.486	74	44	1	196	266	200	273	5.86e-11	63.9
Msa0036610	AT4G04605.1	51.923	52	25	0	213	264	16	67	7.82e-11	62.0

Find 89 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTAACTCTATCTTCTTTA+TGG	0.063110	1_1:-65208454	None:intergenic
CACAATGCAGCGTTTCAAAA+TGG	0.179894	1_1:+65207718	Msa0036610:exon
ACAAAAGTGGTTGCACCTTC+TGG	0.247597	1_1:+65209270	Msa0036610:CDS
CATATCTACAAACCTGTAAA+TGG	0.279375	1_1:-65208863	None:intergenic
TGAAGTCAAAAGCCATTTAC+AGG	0.284068	1_1:+65208851	Msa0036610:CDS
AACGAAAGAGGAAGTTCTTT+AGG	0.297245	1_1:-65207797	None:intergenic
ATATCGATGAAGAAAGAATA+TGG	0.311789	1_1:-65207606	None:intergenic
GATGTCTCCAACATTGTTAC+TGG	0.321828	1_1:-65208558	None:intergenic
ATTACCTCTCTGATTTGCTT+TGG	0.356836	1_1:-65208804	None:intergenic
CTTTCGTTATTTGTTGAACT+TGG	0.382926	1_1:-65209144	None:intergenic
AATAACATTATACAACAAAA+AGG	0.387476	1_1:-65209553	None:intergenic
GGCTTAGATCTGTTCAGTTA+TGG	0.389861	1_1:+65208195	Msa0036610:CDS
CCCCACCATACTCTTGTTGT+TGG	0.395076	1_1:-65209218	None:intergenic
GGAATAAACTCTTCTAAAAC+AGG	0.409660	1_1:-65208053	None:intergenic
TTTGTCCAACAACAAGAGTA+TGG	0.414336	1_1:+65209213	Msa0036610:CDS
ATTATTACCTCTTCAGATGA+AGG	0.417768	1_1:-65208227	None:intergenic
GACGTTCTTGTTCTAATGCT+TGG	0.420567	1_1:-65207757	None:intergenic
ACAATGCAGCGTTTCAAAAT+GGG	0.423030	1_1:+65207719	Msa0036610:exon
GTAGCTTCATCAACAACAAC+AGG	0.429695	1_1:+65209240	Msa0036610:CDS
TGCTCAAACCTCTTGAACTC+TGG	0.432408	1_1:-65209342	None:intergenic
GCAGCGACGGTGCTGGTCGC+AGG	0.434166	1_1:+65208610	Msa0036610:CDS
GTTTATTCCAATTAAGAAAA+GGG	0.437351	1_1:+65208067	Msa0036610:CDS
GTTGCACAAGCGATTCTTGA+AGG	0.440339	1_1:+65208634	Msa0036610:CDS
GAATGAAGGAGAAACAAAGA+AGG	0.444900	1_1:-65207520	None:intergenic
AGTTTATTCCAATTAAGAAA+AGG	0.446516	1_1:+65208066	Msa0036610:CDS
ACTCTATCTTCTTTATGGAA+TGG	0.449526	1_1:-65208449	None:intergenic
GCTTGTCGACAACAATTGTC+TGG	0.459321	1_1:+65207963	Msa0036610:CDS
CATCAAAAGAGACGAGAAAG+AGG	0.461312	1_1:+65208577	Msa0036610:CDS
TTGAAGGCGCTTCAGCAACT+TGG	0.469776	1_1:+65208650	Msa0036610:CDS
GAGACAGTTCGCGAAGAACT+CGG	0.475399	1_1:-65207491	None:intergenic
TATCGATGAAGAAAGAATAT+GGG	0.478424	1_1:-65207605	None:intergenic
AGAGAGGTAATGAATGTTGA+TGG	0.478733	1_1:+65208816	Msa0036610:CDS
GCATTCAATCTCAGATGAAA+GGG	0.480171	1_1:+65209362	Msa0036610:CDS
AGGTGCTGCTGTTTGTGAAT+TGG	0.480961	1_1:-65209169	None:intergenic
CTCTCTGATTTGCTTTGGTG+TGG	0.488332	1_1:-65208799	None:intergenic
GTGTTGGAATTGAAGAGAAA+TGG	0.488831	1_1:+65208404	Msa0036610:CDS
ACAACTGAGTATAATTTGAA+TGG	0.489356	1_1:+65207990	Msa0036610:CDS
TCAATAACCAGGGGAAGTAT+TGG	0.491273	1_1:-65209451	None:intergenic
TTGGTCTTCTAGTATGCAAC+CGG	0.498211	1_1:-65209125	None:intergenic
ACAAGTGAATTGTTAAGTAA+AGG	0.498649	1_1:+65208482	Msa0036610:CDS
AGACAGTTCGCGAAGAACTC+GGG	0.499976	1_1:-65207490	None:intergenic
ATGTTGCCTACAAGGACAAA+AGG	0.503411	1_1:-65209189	None:intergenic
AAGGCGCTTCAGCAACTTGG+TGG	0.504237	1_1:+65208653	Msa0036610:CDS
ACTTGAGGATGTGTGGCTAC+TGG	0.518302	1_1:-65209303	None:intergenic
TTCTTAATTGTAGCAACTTG+AGG	0.518381	1_1:-65209318	None:intergenic
AGCATTCAATCTCAGATGAA+AGG	0.522044	1_1:+65209361	Msa0036610:CDS
AAGAGAAATGGAAGTGGTGG+TGG	0.523432	1_1:+65208416	Msa0036610:CDS
TGTGTAGAGGATGAAGATGT+AGG	0.529070	1_1:-65209420	None:intergenic
AATGAAGGAGAAACAAAGAA+GGG	0.534302	1_1:-65207519	None:intergenic
TTAAGAAACCAGAGTTCAAG+AGG	0.534779	1_1:+65209334	Msa0036610:CDS
TCCAACAACAAGAGTATGGT+GGG	0.538170	1_1:+65209217	Msa0036610:CDS
AGAGAAAGCAGCGACGGTGC+TGG	0.540249	1_1:+65208603	Msa0036610:CDS
AGAACTCACGGCAGCTACAC+CGG	0.545612	1_1:-65208519	None:intergenic
TTTGAAACGCTGCATTGTGA+AGG	0.557389	1_1:-65207714	None:intergenic
GTAACGAGTTCTAACGAAAG+AGG	0.565892	1_1:-65207809	None:intergenic
GGCAGCTACACCGGTCGAAG+AGG	0.574491	1_1:-65208510	None:intergenic
AAAATTAAAACTCAATAACC+AGG	0.575545	1_1:-65209462	None:intergenic
ATAATCGATTCTGAAGAGAA+TGG	0.575641	1_1:-65207665	None:intergenic
ATAATAAGAAGAAATCTGAC+TGG	0.576819	1_1:+65208174	Msa0036610:CDS
AGGAAAAGAGAAAGCAGCGA+CGG	0.577313	1_1:+65208597	Msa0036610:CDS
ACTACTACCAATACTTCCCC+TGG	0.577357	1_1:+65209444	Msa0036610:CDS
TAAGAAAACAGTGCCTGTGT+TGG	0.581215	1_1:+65208388	Msa0036610:CDS
TTCAGATCCTTCATCTGAAG+AGG	0.584122	1_1:+65208220	Msa0036610:CDS
AAAATGGTTTATGTAAGAAG+AGG	0.585452	1_1:-65207689	None:intergenic
AAAGGACAACCCTCTTCGAC+CGG	0.587220	1_1:+65208500	Msa0036610:CDS
AAATTAAAACTCAATAACCA+GGG	0.590216	1_1:-65209461	None:intergenic
GCAGCTACACCGGTCGAAGA+GGG	0.597437	1_1:-65208509	None:intergenic
AATCACATACAACATAAATG+AGG	0.600136	1_1:-65209577	None:intergenic
TTTCTCTTCAATTCCAACAC+AGG	0.600323	1_1:-65208401	None:intergenic
CTTGTTCTAAAGAGATAACA+TGG	0.602698	1_1:-65209677	None:intergenic
AACAGGGGAAATGACAAAAG+TGG	0.604173	1_1:+65209257	Msa0036610:CDS
ATTGGTAGTAGTATGTGTAG+AGG	0.610237	1_1:-65209433	None:intergenic
AATGTCACCAGTAACAATGT+TGG	0.610482	1_1:+65208551	Msa0036610:CDS
GTCCAACAACAAGAGTATGG+TGG	0.618792	1_1:+65209216	Msa0036610:CDS
GAACAGACAACATCAACAGA+TGG	0.623810	1_1:+65208029	Msa0036610:CDS
ATTAGCCGCATTAGAACTCA+CGG	0.629576	1_1:-65208531	None:intergenic
TCGTTAGAACTCGTTACACA+AGG	0.638093	1_1:+65207815	Msa0036610:CDS
GAAAGGGGTAATAACAGTGA+AGG	0.640994	1_1:+65209378	Msa0036610:CDS
TTGAAGAGAAATGGAAGTGG+TGG	0.651388	1_1:+65208413	Msa0036610:CDS
CATTCAATCTCAGATGAAAG+GGG	0.655574	1_1:+65209363	Msa0036610:CDS
ACTGGTGCATAGATTCCAGA+AGG	0.656305	1_1:-65209285	None:intergenic
AGCTGCCGTGAGTTCTAATG+CGG	0.671481	1_1:+65208526	Msa0036610:CDS
TGTAGCAACTTGAGGATGTG+TGG	0.683531	1_1:-65209310	None:intergenic
GAATTGAAGAGAAATGGAAG+TGG	0.689165	1_1:+65208410	Msa0036610:CDS
TAGCTTCATCAACAACAACA+GGG	0.693117	1_1:+65209241	Msa0036610:CDS
AATTAAAACTCAATAACCAG+GGG	0.700665	1_1:-65209460	None:intergenic
CCAACAACAAGAGTATGGTG+GGG	0.702776	1_1:+65209218	Msa0036610:CDS
AGCTTCATCAACAACAACAG+GGG	0.709783	1_1:+65209242	Msa0036610:CDS
CACACCAAAGCAAATCAGAG+AGG	0.720773	1_1:+65208800	Msa0036610:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TCATATAAAAAAAACAAAAA+GGG	-	chr1_1:65207851-65207870	None:intergenic	10.0%
!!	ATCATATAAAAAAAACAAAA+AGG	-	chr1_1:65207852-65207871	None:intergenic	10.0%
!!!	AAAATAATTTTGGATTTTTT+TGG	+	chr1_1:65207921-65207940	Msa0036610:intron	10.0%
!!!	AAAAAAATTGATTTTAATTG+AGG	-	chr1_1:65209081-65209100	None:intergenic	10.0%
!!	TCATATAAAAAAAACAAAAA+GGG	-	chr1_1:65207851-65207870	None:intergenic	10.0%
!!	ATCATATAAAAAAAACAAAA+AGG	-	chr1_1:65207852-65207871	None:intergenic	10.0%
!!!	AAAATAATTTTGGATTTTTT+TGG	+	chr1_1:65207921-65207940	Msa0036610:intron	10.0%
!!!	AAAAAAATTGATTTTAATTG+AGG	-	chr1_1:65209081-65209100	None:intergenic	10.0%
!!!	AAGTTTGTATTTTTATTATC+TGG	+	chr1_1:65207881-65207900	Msa0036610:intron	15.0%
!!!	AGTTTGTATTTTTATTATCT+GGG	+	chr1_1:65207882-65207901	Msa0036610:intron	15.0%
!!!	TTTACTTTTTGTTAAACTAA+AGG	+	chr1_1:65208298-65208317	Msa0036610:intron	15.0%
!!!	TTACTTTTTGTTAAACTAAA+GGG	+	chr1_1:65208299-65208318	Msa0036610:intron	15.0%
!!	AATAACATTATACAACAAAA+AGG	-	chr1_1:65209556-65209575	None:intergenic	15.0%
!!!	AAGTTTGTATTTTTATTATC+TGG	+	chr1_1:65207881-65207900	Msa0036610:intron	15.0%
!!!	AGTTTGTATTTTTATTATCT+GGG	+	chr1_1:65207882-65207901	Msa0036610:intron	15.0%
!!!	TTTACTTTTTGTTAAACTAA+AGG	+	chr1_1:65208298-65208317	Msa0036610:intron	15.0%
!!!	TTACTTTTTGTTAAACTAAA+GGG	+	chr1_1:65208299-65208318	Msa0036610:intron	15.0%
!!	AATAACATTATACAACAAAA+AGG	-	chr1_1:65209556-65209575	None:intergenic	15.0%
!!	AAAAGAAAGAAAAAGAATGA+AGG	-	chr1_1:65207537-65207556	None:intergenic	20.0%
!!	AGTTTATTCCAATTAAGAAA+AGG	+	chr1_1:65208066-65208085	Msa0036610:CDS	20.0%
!!	GTTTATTCCAATTAAGAAAA+GGG	+	chr1_1:65208067-65208086	Msa0036610:CDS	20.0%
!!!	TTTTTCACAAAAACAAAACA+AGG	-	chr1_1:65208352-65208371	None:intergenic	20.0%
!!!	GTTTTTGTGAAAAATTGTTT+AGG	+	chr1_1:65208358-65208377	Msa0036610:intron	20.0%
!!	AAATTAAAACTCAATAACCA+GGG	-	chr1_1:65209464-65209483	None:intergenic	20.0%
!!	AAAATTAAAACTCAATAACC+AGG	-	chr1_1:65209465-65209484	None:intergenic	20.0%
!!	AAAAGAAAGAAAAAGAATGA+AGG	-	chr1_1:65207537-65207556	None:intergenic	20.0%
!!	AGTTTATTCCAATTAAGAAA+AGG	+	chr1_1:65208066-65208085	Msa0036610:CDS	20.0%
!!	GTTTATTCCAATTAAGAAAA+GGG	+	chr1_1:65208067-65208086	Msa0036610:CDS	20.0%
!!!	TTTTTCACAAAAACAAAACA+AGG	-	chr1_1:65208352-65208371	None:intergenic	20.0%
!!!	GTTTTTGTGAAAAATTGTTT+AGG	+	chr1_1:65208358-65208377	Msa0036610:intron	20.0%
!!	AAATTAAAACTCAATAACCA+GGG	-	chr1_1:65209464-65209483	None:intergenic	20.0%
!!	AAAATTAAAACTCAATAACC+AGG	-	chr1_1:65209465-65209484	None:intergenic	20.0%
!	TCTGAAGAAGAATCAAAAAT+TGG	-	chr1_1:65207584-65207603	None:intergenic	25.0%
!	TATCGATGAAGAAAGAATAT+GGG	-	chr1_1:65207608-65207627	None:intergenic	25.0%
!	ATATCGATGAAGAAAGAATA+TGG	-	chr1_1:65207609-65207628	None:intergenic	25.0%
!	AAAATGGTTTATGTAAGAAG+AGG	-	chr1_1:65207692-65207711	None:intergenic	25.0%
!	ACAACTGAGTATAATTTGAA+TGG	+	chr1_1:65207990-65208009	Msa0036610:CDS	25.0%
!	ATAATAAGAAGAAATCTGAC+TGG	+	chr1_1:65208174-65208193	Msa0036610:CDS	25.0%
!	TGTTAACTCTATCTTCTTTA+TGG	-	chr1_1:65208457-65208476	None:intergenic	25.0%
!	ACAAGTGAATTGTTAAGTAA+AGG	+	chr1_1:65208482-65208501	Msa0036610:CDS	25.0%
!	AAATTGACAACAAAAGAGTT+GGG	-	chr1_1:65208897-65208916	None:intergenic	25.0%
!	AAAATTGACAACAAAAGAGT+TGG	-	chr1_1:65208898-65208917	None:intergenic	25.0%
!	AATTAAAACTCAATAACCAG+GGG	-	chr1_1:65209463-65209482	None:intergenic	25.0%
!	AATCACATACAACATAAATG+AGG	-	chr1_1:65209580-65209599	None:intergenic	25.0%
!	TCTGAAGAAGAATCAAAAAT+TGG	-	chr1_1:65207584-65207603	None:intergenic	25.0%
!	TATCGATGAAGAAAGAATAT+GGG	-	chr1_1:65207608-65207627	None:intergenic	25.0%
!	ATATCGATGAAGAAAGAATA+TGG	-	chr1_1:65207609-65207628	None:intergenic	25.0%
!	AAAATGGTTTATGTAAGAAG+AGG	-	chr1_1:65207692-65207711	None:intergenic	25.0%
!	ACAACTGAGTATAATTTGAA+TGG	+	chr1_1:65207990-65208009	Msa0036610:CDS	25.0%
!	ATAATAAGAAGAAATCTGAC+TGG	+	chr1_1:65208174-65208193	Msa0036610:CDS	25.0%
!	TGTTAACTCTATCTTCTTTA+TGG	-	chr1_1:65208457-65208476	None:intergenic	25.0%
!	ACAAGTGAATTGTTAAGTAA+AGG	+	chr1_1:65208482-65208501	Msa0036610:CDS	25.0%
!	AAATTGACAACAAAAGAGTT+GGG	-	chr1_1:65208897-65208916	None:intergenic	25.0%
!	AAAATTGACAACAAAAGAGT+TGG	-	chr1_1:65208898-65208917	None:intergenic	25.0%
!	AATTAAAACTCAATAACCAG+GGG	-	chr1_1:65209463-65209482	None:intergenic	25.0%
!	AATCACATACAACATAAATG+AGG	-	chr1_1:65209580-65209599	None:intergenic	25.0%
	AATGAAGGAGAAACAAAGAA+GGG	-	chr1_1:65207522-65207541	None:intergenic	30.0%
!	ATAATCGATTCTGAAGAGAA+TGG	-	chr1_1:65207668-65207687	None:intergenic	30.0%
!!	GGAATAAACTCTTCTAAAAC+AGG	-	chr1_1:65208056-65208075	None:intergenic	30.0%
	ATTATTACCTCTTCAGATGA+AGG	-	chr1_1:65208230-65208249	None:intergenic	30.0%
	ACTCTATCTTCTTTATGGAA+TGG	-	chr1_1:65208452-65208471	None:intergenic	30.0%
!!!	GTTTTTTGCTTCTGTTCTAT+AGG	+	chr1_1:65208774-65208793	Msa0036610:intron	30.0%
!!!	TTTTGACTTCATCATTTGTG+AGG	-	chr1_1:65208842-65208861	None:intergenic	30.0%
	CATATCTACAAACCTGTAAA+TGG	-	chr1_1:65208866-65208885	None:intergenic	30.0%
	GAAATCCTATGCAATTGAAA+GGG	-	chr1_1:65209002-65209021	None:intergenic	30.0%
	TGAAATCCTATGCAATTGAA+AGG	-	chr1_1:65209003-65209022	None:intergenic	30.0%
!	CTTTCGTTATTTGTTGAACT+TGG	-	chr1_1:65209147-65209166	None:intergenic	30.0%
	TTCTTAATTGTAGCAACTTG+AGG	-	chr1_1:65209321-65209340	None:intergenic	30.0%
!!!	TAAGTCACACCTTTTTTAGA+TGG	+	chr1_1:65209648-65209667	Msa0036610:three_prime_UTR	30.0%
	TGGTAGTATCCATCTAAAAA+AGG	-	chr1_1:65209660-65209679	None:intergenic	30.0%
	AATGAAGGAGAAACAAAGAA+GGG	-	chr1_1:65207522-65207541	None:intergenic	30.0%
!	ATAATCGATTCTGAAGAGAA+TGG	-	chr1_1:65207668-65207687	None:intergenic	30.0%
!!	GGAATAAACTCTTCTAAAAC+AGG	-	chr1_1:65208056-65208075	None:intergenic	30.0%
	ATTATTACCTCTTCAGATGA+AGG	-	chr1_1:65208230-65208249	None:intergenic	30.0%
	ACTCTATCTTCTTTATGGAA+TGG	-	chr1_1:65208452-65208471	None:intergenic	30.0%
!!!	GTTTTTTGCTTCTGTTCTAT+AGG	+	chr1_1:65208774-65208793	Msa0036610:intron	30.0%
!!!	TTTTGACTTCATCATTTGTG+AGG	-	chr1_1:65208842-65208861	None:intergenic	30.0%
	CATATCTACAAACCTGTAAA+TGG	-	chr1_1:65208866-65208885	None:intergenic	30.0%
	GAAATCCTATGCAATTGAAA+GGG	-	chr1_1:65209002-65209021	None:intergenic	30.0%
	TGAAATCCTATGCAATTGAA+AGG	-	chr1_1:65209003-65209022	None:intergenic	30.0%
!	CTTTCGTTATTTGTTGAACT+TGG	-	chr1_1:65209147-65209166	None:intergenic	30.0%
	TTCTTAATTGTAGCAACTTG+AGG	-	chr1_1:65209321-65209340	None:intergenic	30.0%
!!!	TAAGTCACACCTTTTTTAGA+TGG	+	chr1_1:65209648-65209667	Msa0036610:three_prime_UTR	30.0%
	TGGTAGTATCCATCTAAAAA+AGG	-	chr1_1:65209660-65209679	None:intergenic	30.0%
	GAATGAAGGAGAAACAAAGA+AGG	-	chr1_1:65207523-65207542	None:intergenic	35.0%
	ACAATGCAGCGTTTCAAAAT+GGG	+	chr1_1:65207719-65207738	Msa0036610:exon	35.0%
	AACGAAAGAGGAAGTTCTTT+AGG	-	chr1_1:65207800-65207819	None:intergenic	35.0%
!	GAAGAAGCCCTTTTCTTAAT+TGG	-	chr1_1:65208077-65208096	None:intergenic	35.0%
	TTTCTCTTCAATTCCAACAC+AGG	-	chr1_1:65208404-65208423	None:intergenic	35.0%
	GTGTTGGAATTGAAGAGAAA+TGG	+	chr1_1:65208404-65208423	Msa0036610:CDS	35.0%
	GAATTGAAGAGAAATGGAAG+TGG	+	chr1_1:65208410-65208429	Msa0036610:CDS	35.0%
	AATGTCACCAGTAACAATGT+TGG	+	chr1_1:65208551-65208570	Msa0036610:CDS	35.0%
!!	ATTACCTCTCTGATTTGCTT+TGG	-	chr1_1:65208807-65208826	None:intergenic	35.0%
	AGAGAGGTAATGAATGTTGA+TGG	+	chr1_1:65208816-65208835	Msa0036610:CDS	35.0%
	TGAAGTCAAAAGCCATTTAC+AGG	+	chr1_1:65208851-65208870	Msa0036610:CDS	35.0%
	TTAGTCCCTTTCAATTGCAT+AGG	+	chr1_1:65208994-65209013	Msa0036610:intron	35.0%
!	TCTGTTTTGCACAGAAATAC+CGG	+	chr1_1:65209106-65209125	Msa0036610:intron	35.0%
	TTTGTCCAACAACAAGAGTA+TGG	+	chr1_1:65209213-65209232	Msa0036610:CDS	35.0%
	TAGCTTCATCAACAACAACA+GGG	+	chr1_1:65209241-65209260	Msa0036610:CDS	35.0%
	TTAAGAAACCAGAGTTCAAG+AGG	+	chr1_1:65209334-65209353	Msa0036610:CDS	35.0%
	AGCATTCAATCTCAGATGAA+AGG	+	chr1_1:65209361-65209380	Msa0036610:CDS	35.0%
	GCATTCAATCTCAGATGAAA+GGG	+	chr1_1:65209362-65209381	Msa0036610:CDS	35.0%
	CATTCAATCTCAGATGAAAG+GGG	+	chr1_1:65209363-65209382	Msa0036610:CDS	35.0%
!	ATTGGTAGTAGTATGTGTAG+AGG	-	chr1_1:65209436-65209455	None:intergenic	35.0%
	GAATGAAGGAGAAACAAAGA+AGG	-	chr1_1:65207523-65207542	None:intergenic	35.0%
	ACAATGCAGCGTTTCAAAAT+GGG	+	chr1_1:65207719-65207738	Msa0036610:exon	35.0%
	AACGAAAGAGGAAGTTCTTT+AGG	-	chr1_1:65207800-65207819	None:intergenic	35.0%
!	GAAGAAGCCCTTTTCTTAAT+TGG	-	chr1_1:65208077-65208096	None:intergenic	35.0%
	TTTCTCTTCAATTCCAACAC+AGG	-	chr1_1:65208404-65208423	None:intergenic	35.0%
	GTGTTGGAATTGAAGAGAAA+TGG	+	chr1_1:65208404-65208423	Msa0036610:CDS	35.0%
	GAATTGAAGAGAAATGGAAG+TGG	+	chr1_1:65208410-65208429	Msa0036610:CDS	35.0%
	AATGTCACCAGTAACAATGT+TGG	+	chr1_1:65208551-65208570	Msa0036610:CDS	35.0%
!!	ATTACCTCTCTGATTTGCTT+TGG	-	chr1_1:65208807-65208826	None:intergenic	35.0%
	AGAGAGGTAATGAATGTTGA+TGG	+	chr1_1:65208816-65208835	Msa0036610:CDS	35.0%
	TGAAGTCAAAAGCCATTTAC+AGG	+	chr1_1:65208851-65208870	Msa0036610:CDS	35.0%
	TTAGTCCCTTTCAATTGCAT+AGG	+	chr1_1:65208994-65209013	Msa0036610:intron	35.0%
!	TCTGTTTTGCACAGAAATAC+CGG	+	chr1_1:65209106-65209125	Msa0036610:intron	35.0%
	TTTGTCCAACAACAAGAGTA+TGG	+	chr1_1:65209213-65209232	Msa0036610:CDS	35.0%
	TAGCTTCATCAACAACAACA+GGG	+	chr1_1:65209241-65209260	Msa0036610:CDS	35.0%
	TTAAGAAACCAGAGTTCAAG+AGG	+	chr1_1:65209334-65209353	Msa0036610:CDS	35.0%
	AGCATTCAATCTCAGATGAA+AGG	+	chr1_1:65209361-65209380	Msa0036610:CDS	35.0%
	GCATTCAATCTCAGATGAAA+GGG	+	chr1_1:65209362-65209381	Msa0036610:CDS	35.0%
	CATTCAATCTCAGATGAAAG+GGG	+	chr1_1:65209363-65209382	Msa0036610:CDS	35.0%
!	ATTGGTAGTAGTATGTGTAG+AGG	-	chr1_1:65209436-65209455	None:intergenic	35.0%
	CTGCATTGTGAAGGCAAAAA+TGG	-	chr1_1:65207708-65207727	None:intergenic	40.0%
!	TTTGAAACGCTGCATTGTGA+AGG	-	chr1_1:65207717-65207736	None:intergenic	40.0%
	CACAATGCAGCGTTTCAAAA+TGG	+	chr1_1:65207718-65207737	Msa0036610:exon	40.0%
	GACGTTCTTGTTCTAATGCT+TGG	-	chr1_1:65207760-65207779	None:intergenic	40.0%
!	GTAACGAGTTCTAACGAAAG+AGG	-	chr1_1:65207812-65207831	None:intergenic	40.0%
	TCGTTAGAACTCGTTACACA+AGG	+	chr1_1:65207815-65207834	Msa0036610:CDS	40.0%
	GAACAGACAACATCAACAGA+TGG	+	chr1_1:65208029-65208048	Msa0036610:CDS	40.0%
	GGCTTAGATCTGTTCAGTTA+TGG	+	chr1_1:65208195-65208214	Msa0036610:CDS	40.0%
	TTCAGATCCTTCATCTGAAG+AGG	+	chr1_1:65208220-65208239	Msa0036610:CDS	40.0%
	TAAGAAAACAGTGCCTGTGT+TGG	+	chr1_1:65208388-65208407	Msa0036610:CDS	40.0%
	TTGAAGAGAAATGGAAGTGG+TGG	+	chr1_1:65208413-65208432	Msa0036610:CDS	40.0%
	ATTAGCCGCATTAGAACTCA+CGG	-	chr1_1:65208534-65208553	None:intergenic	40.0%
	GATGTCTCCAACATTGTTAC+TGG	-	chr1_1:65208561-65208580	None:intergenic	40.0%
	CATCAAAAGAGACGAGAAAG+AGG	+	chr1_1:65208577-65208596	Msa0036610:CDS	40.0%
!	TTGGTCTTCTAGTATGCAAC+CGG	-	chr1_1:65209128-65209147	None:intergenic	40.0%
	ATGTTGCCTACAAGGACAAA+AGG	-	chr1_1:65209192-65209211	None:intergenic	40.0%
	GGACAAAAATGTTGCCTACA+AGG	-	chr1_1:65209200-65209219	None:intergenic	40.0%
!	TCCAACAACAAGAGTATGGT+GGG	+	chr1_1:65209217-65209236	Msa0036610:CDS	40.0%
	GTAGCTTCATCAACAACAAC+AGG	+	chr1_1:65209240-65209259	Msa0036610:CDS	40.0%
	AGCTTCATCAACAACAACAG+GGG	+	chr1_1:65209242-65209261	Msa0036610:CDS	40.0%
	AACAGGGGAAATGACAAAAG+TGG	+	chr1_1:65209257-65209276	Msa0036610:CDS	40.0%
	GAAAGGGGTAATAACAGTGA+AGG	+	chr1_1:65209378-65209397	Msa0036610:CDS	40.0%
	TGTGTAGAGGATGAAGATGT+AGG	-	chr1_1:65209423-65209442	None:intergenic	40.0%
!	TCAATAACCAGGGGAAGTAT+TGG	-	chr1_1:65209454-65209473	None:intergenic	40.0%
	CTGCATTGTGAAGGCAAAAA+TGG	-	chr1_1:65207708-65207727	None:intergenic	40.0%
!	TTTGAAACGCTGCATTGTGA+AGG	-	chr1_1:65207717-65207736	None:intergenic	40.0%
	CACAATGCAGCGTTTCAAAA+TGG	+	chr1_1:65207718-65207737	Msa0036610:exon	40.0%
	GACGTTCTTGTTCTAATGCT+TGG	-	chr1_1:65207760-65207779	None:intergenic	40.0%
!	GTAACGAGTTCTAACGAAAG+AGG	-	chr1_1:65207812-65207831	None:intergenic	40.0%
	TCGTTAGAACTCGTTACACA+AGG	+	chr1_1:65207815-65207834	Msa0036610:CDS	40.0%
	GAACAGACAACATCAACAGA+TGG	+	chr1_1:65208029-65208048	Msa0036610:CDS	40.0%
	GGCTTAGATCTGTTCAGTTA+TGG	+	chr1_1:65208195-65208214	Msa0036610:CDS	40.0%
	TTCAGATCCTTCATCTGAAG+AGG	+	chr1_1:65208220-65208239	Msa0036610:CDS	40.0%
	TAAGAAAACAGTGCCTGTGT+TGG	+	chr1_1:65208388-65208407	Msa0036610:CDS	40.0%
	TTGAAGAGAAATGGAAGTGG+TGG	+	chr1_1:65208413-65208432	Msa0036610:CDS	40.0%
	ATTAGCCGCATTAGAACTCA+CGG	-	chr1_1:65208534-65208553	None:intergenic	40.0%
	GATGTCTCCAACATTGTTAC+TGG	-	chr1_1:65208561-65208580	None:intergenic	40.0%
	CATCAAAAGAGACGAGAAAG+AGG	+	chr1_1:65208577-65208596	Msa0036610:CDS	40.0%
!	TTGGTCTTCTAGTATGCAAC+CGG	-	chr1_1:65209128-65209147	None:intergenic	40.0%
	ATGTTGCCTACAAGGACAAA+AGG	-	chr1_1:65209192-65209211	None:intergenic	40.0%
	GGACAAAAATGTTGCCTACA+AGG	-	chr1_1:65209200-65209219	None:intergenic	40.0%
!	TCCAACAACAAGAGTATGGT+GGG	+	chr1_1:65209217-65209236	Msa0036610:CDS	40.0%
	GTAGCTTCATCAACAACAAC+AGG	+	chr1_1:65209240-65209259	Msa0036610:CDS	40.0%
	AGCTTCATCAACAACAACAG+GGG	+	chr1_1:65209242-65209261	Msa0036610:CDS	40.0%
	AACAGGGGAAATGACAAAAG+TGG	+	chr1_1:65209257-65209276	Msa0036610:CDS	40.0%
	GAAAGGGGTAATAACAGTGA+AGG	+	chr1_1:65209378-65209397	Msa0036610:CDS	40.0%
	TGTGTAGAGGATGAAGATGT+AGG	-	chr1_1:65209423-65209442	None:intergenic	40.0%
!	TCAATAACCAGGGGAAGTAT+TGG	-	chr1_1:65209454-65209473	None:intergenic	40.0%
!	CTGAAGAGAATGGCGTTTTG+TGG	-	chr1_1:65207658-65207677	None:intergenic	45.0%
	GCTTGTCGACAACAATTGTC+TGG	+	chr1_1:65207963-65207982	Msa0036610:CDS	45.0%
	AAGAGAAATGGAAGTGGTGG+TGG	+	chr1_1:65208416-65208435	Msa0036610:CDS	45.0%
	AGGAAAAGAGAAAGCAGCGA+CGG	+	chr1_1:65208597-65208616	Msa0036610:CDS	45.0%
	GTTGCACAAGCGATTCTTGA+AGG	+	chr1_1:65208634-65208653	Msa0036610:CDS	45.0%
!!	CTCTCTGATTTGCTTTGGTG+TGG	-	chr1_1:65208802-65208821	None:intergenic	45.0%
	CACACCAAAGCAAATCAGAG+AGG	+	chr1_1:65208800-65208819	Msa0036610:CDS	45.0%
!!	AGGTGCTGCTGTTTGTGAAT+TGG	-	chr1_1:65209172-65209191	None:intergenic	45.0%
!	GTCCAACAACAAGAGTATGG+TGG	+	chr1_1:65209216-65209235	Msa0036610:CDS	45.0%
!	CCAACAACAAGAGTATGGTG+GGG	+	chr1_1:65209218-65209237	Msa0036610:CDS	45.0%
	ACAAAAGTGGTTGCACCTTC+TGG	+	chr1_1:65209270-65209289	Msa0036610:CDS	45.0%
	ACTGGTGCATAGATTCCAGA+AGG	-	chr1_1:65209288-65209307	None:intergenic	45.0%
	TGTAGCAACTTGAGGATGTG+TGG	-	chr1_1:65209313-65209332	None:intergenic	45.0%
	TGCTCAAACCTCTTGAACTC+TGG	-	chr1_1:65209345-65209364	None:intergenic	45.0%
	ACTACTACCAATACTTCCCC+TGG	+	chr1_1:65209444-65209463	Msa0036610:CDS	45.0%
!	CTGAAGAGAATGGCGTTTTG+TGG	-	chr1_1:65207658-65207677	None:intergenic	45.0%
	GCTTGTCGACAACAATTGTC+TGG	+	chr1_1:65207963-65207982	Msa0036610:CDS	45.0%
	AAGAGAAATGGAAGTGGTGG+TGG	+	chr1_1:65208416-65208435	Msa0036610:CDS	45.0%
	AGGAAAAGAGAAAGCAGCGA+CGG	+	chr1_1:65208597-65208616	Msa0036610:CDS	45.0%
	GTTGCACAAGCGATTCTTGA+AGG	+	chr1_1:65208634-65208653	Msa0036610:CDS	45.0%
!!	CTCTCTGATTTGCTTTGGTG+TGG	-	chr1_1:65208802-65208821	None:intergenic	45.0%
	CACACCAAAGCAAATCAGAG+AGG	+	chr1_1:65208800-65208819	Msa0036610:CDS	45.0%
!!	AGGTGCTGCTGTTTGTGAAT+TGG	-	chr1_1:65209172-65209191	None:intergenic	45.0%
!	GTCCAACAACAAGAGTATGG+TGG	+	chr1_1:65209216-65209235	Msa0036610:CDS	45.0%
!	CCAACAACAAGAGTATGGTG+GGG	+	chr1_1:65209218-65209237	Msa0036610:CDS	45.0%
	ACAAAAGTGGTTGCACCTTC+TGG	+	chr1_1:65209270-65209289	Msa0036610:CDS	45.0%
	ACTGGTGCATAGATTCCAGA+AGG	-	chr1_1:65209288-65209307	None:intergenic	45.0%
	TGTAGCAACTTGAGGATGTG+TGG	-	chr1_1:65209313-65209332	None:intergenic	45.0%
	TGCTCAAACCTCTTGAACTC+TGG	-	chr1_1:65209345-65209364	None:intergenic	45.0%
	ACTACTACCAATACTTCCCC+TGG	+	chr1_1:65209444-65209463	Msa0036610:CDS	45.0%
!!!	TTATTTTTGAAAAATAATTT+TGG	+	chr1_1:65207911-65207930	Msa0036610:intron	5.0%
!!!	TTATTTTTGAAAAATAATTT+TGG	+	chr1_1:65207911-65207930	Msa0036610:intron	5.0%
	AGACAGTTCGCGAAGAACTC+GGG	-	chr1_1:65207493-65207512	None:intergenic	50.0%
	GAGACAGTTCGCGAAGAACT+CGG	-	chr1_1:65207494-65207513	None:intergenic	50.0%
	CAAGAGAGAGAGAGAGAGTG+GGG	-	chr1_1:65207632-65207651	None:intergenic	50.0%
	GCAAGAGAGAGAGAGAGAGT+GGG	-	chr1_1:65207633-65207652	None:intergenic	50.0%
	AGCAAGAGAGAGAGAGAGAG+TGG	-	chr1_1:65207634-65207653	None:intergenic	50.0%
	AAAGGACAACCCTCTTCGAC+CGG	+	chr1_1:65208500-65208519	Msa0036610:CDS	50.0%
!	AGCTGCCGTGAGTTCTAATG+CGG	+	chr1_1:65208526-65208545	Msa0036610:CDS	50.0%
!!	TTGAAGGCGCTTCAGCAACT+TGG	+	chr1_1:65208650-65208669	Msa0036610:CDS	50.0%
!	GCAGCACCTTTTGTCCTTGT+AGG	+	chr1_1:65209183-65209202	Msa0036610:CDS	50.0%
!	CCCCACCATACTCTTGTTGT+TGG	-	chr1_1:65209221-65209240	None:intergenic	50.0%
	ACTTGAGGATGTGTGGCTAC+TGG	-	chr1_1:65209306-65209325	None:intergenic	50.0%
	AGACAGTTCGCGAAGAACTC+GGG	-	chr1_1:65207493-65207512	None:intergenic	50.0%
	GAGACAGTTCGCGAAGAACT+CGG	-	chr1_1:65207494-65207513	None:intergenic	50.0%
	CAAGAGAGAGAGAGAGAGTG+GGG	-	chr1_1:65207632-65207651	None:intergenic	50.0%
	GCAAGAGAGAGAGAGAGAGT+GGG	-	chr1_1:65207633-65207652	None:intergenic	50.0%
	AGCAAGAGAGAGAGAGAGAG+TGG	-	chr1_1:65207634-65207653	None:intergenic	50.0%
	AAAGGACAACCCTCTTCGAC+CGG	+	chr1_1:65208500-65208519	Msa0036610:CDS	50.0%
!	AGCTGCCGTGAGTTCTAATG+CGG	+	chr1_1:65208526-65208545	Msa0036610:CDS	50.0%
!!	TTGAAGGCGCTTCAGCAACT+TGG	+	chr1_1:65208650-65208669	Msa0036610:CDS	50.0%
!	GCAGCACCTTTTGTCCTTGT+AGG	+	chr1_1:65209183-65209202	Msa0036610:CDS	50.0%
!	CCCCACCATACTCTTGTTGT+TGG	-	chr1_1:65209221-65209240	None:intergenic	50.0%
	ACTTGAGGATGTGTGGCTAC+TGG	-	chr1_1:65209306-65209325	None:intergenic	50.0%
	AGAACTCACGGCAGCTACAC+CGG	-	chr1_1:65208522-65208541	None:intergenic	55.0%
!	AAGGCGCTTCAGCAACTTGG+TGG	+	chr1_1:65208653-65208672	Msa0036610:CDS	55.0%
	GACAGTTCGCGAAGAACTCG+GGG	-	chr1_1:65207492-65207511	None:intergenic	55.0%
	AGAACTCACGGCAGCTACAC+CGG	-	chr1_1:65208522-65208541	None:intergenic	55.0%
!	AAGGCGCTTCAGCAACTTGG+TGG	+	chr1_1:65208653-65208672	Msa0036610:CDS	55.0%
	GCAGCTACACCGGTCGAAGA+GGG	-	chr1_1:65208512-65208531	None:intergenic	60.0%
	AGAGAAAGCAGCGACGGTGC+TGG	+	chr1_1:65208603-65208622	Msa0036610:CDS	60.0%
	GCAGCTACACCGGTCGAAGA+GGG	-	chr1_1:65208512-65208531	None:intergenic	60.0%
	AGAGAAAGCAGCGACGGTGC+TGG	+	chr1_1:65208603-65208622	Msa0036610:CDS	60.0%
	GGCAGCTACACCGGTCGAAG+AGG	-	chr1_1:65208513-65208532	None:intergenic	65.0%
	GGCAGCTACACCGGTCGAAG+AGG	-	chr1_1:65208513-65208532	None:intergenic	65.0%
!!	GCAGCGACGGTGCTGGTCGC+AGG	+	chr1_1:65208610-65208629	Msa0036610:CDS	75.0%
!!	GCAGCGACGGTGCTGGTCGC+AGG	+	chr1_1:65208610-65208629	Msa0036610:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_1	gene	65207490	65209688	65207490	ID=Msa0036610;Name=Msa0036610
chr1_1	mRNA	65207490	65209688	65207490	ID=Msa0036610-mRNA-1;Parent=Msa0036610;Name=Msa0036610-mRNA-1;_AED=0.07;_eAED=0.07;_QI=232\|1\|1\|1\|1\|1\|5\|215\|378
chr1_1	exon	65207490	65207836	65207490	ID=Msa0036610-mRNA-1:exon:20983;Parent=Msa0036610-mRNA-1
chr1_1	exon	65207955	65208241	65207955	ID=Msa0036610-mRNA-1:exon:20984;Parent=Msa0036610-mRNA-1
chr1_1	exon	65208380	65208683	65208380	ID=Msa0036610-mRNA-1:exon:20985;Parent=Msa0036610-mRNA-1
chr1_1	exon	65208796	65208872	65208796	ID=Msa0036610-mRNA-1:exon:20986;Parent=Msa0036610-mRNA-1
chr1_1	exon	65209120	65209688	65209120	ID=Msa0036610-mRNA-1:exon:20987;Parent=Msa0036610-mRNA-1
chr1_1	five_prime_UTR	65207490	65207721	65207490	ID=Msa0036610-mRNA-1:five_prime_utr;Parent=Msa0036610-mRNA-1
chr1_1	CDS	65207722	65207836	65207722	ID=Msa0036610-mRNA-1:cds;Parent=Msa0036610-mRNA-1
chr1_1	CDS	65207955	65208241	65207955	ID=Msa0036610-mRNA-1:cds;Parent=Msa0036610-mRNA-1
chr1_1	CDS	65208380	65208683	65208380	ID=Msa0036610-mRNA-1:cds;Parent=Msa0036610-mRNA-1
chr1_1	CDS	65208796	65208872	65208796	ID=Msa0036610-mRNA-1:cds;Parent=Msa0036610-mRNA-1
chr1_1	CDS	65209120	65209473	65209120	ID=Msa0036610-mRNA-1:cds;Parent=Msa0036610-mRNA-1
chr1_1	three_prime_UTR	65209474	65209688	65209474	ID=Msa0036610-mRNA-1:three_prime_utr;Parent=Msa0036610-mRNA-1

Gene Sequence

>Msa0036610

ATGCAGCGTTTCAAAATGGGTTTCTCTGATTATATCCAAGCATTAGAACAAGAACGTCGTAAGATTCAAGTCTTTCCTAAAGAACTTCCTCTTTCGTTAGAACTCGTTACACAAGCTATTGAAGCTTGTCGACAACAATTGTCTGGAACAACAACTGAGTATAATTTGAATGGACAATCTGAGTGTTCTGAACAGACAACATCAACAGATGGACCTGTTTTAGAAGAGTTTATTCCAATTAAGAAAAGGGCTTCTTCTTATTCTCAAGAAGTGTTTGATGATGTAGAAGATTATGATCAACATTTTCATCATAAGCAACAAAAACTTTCATTAGATAATAAGAAGAAATCTGACTGGCTTAGATCTGTTCAGTTATGGAATTCAGATCCTTCATCTGAAGAGGATGTTACTAAGAAAACAGTGCCTGTGTTGGAATTGAAGAGAAATGGAAGTGGTGGTGGTGCTTTTCATCCATTCCATAAAGAAGATAGAGTTAACAACAAGACAAGTGAATTGTTAAGTAAAGGACAACCCTCTTCGACCGGTGTAGCTGCCGTGAGTTCTAATGCGGCTAATGTCACCAGTAACAATGTTGGAGACATCAAAAGAGACGAGAAAGAGGAAAAGAGAAAGCAGCGACGGTGCTGGTCGCAGGAGTTGCACAAGCGATTCTTGAAGGCGCTTCAGCAACTTGGTGGTGCAGATTGTGCCACACCAAAGCAAATCAGAGAGGTAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTACAGAAATACCGGTTGCATACTAGAAGACCAAGTTCAACAAATAACGAAAGTGCCAATTCACAAACAGCAGCACCTTTTGTCCTTGTAGGCAACATTTTTGTCCAACAACAAGAGTATGGTGGGGTAGCTTCATCAACAACAACAGGGGAAATGACAAAAGTGGTTGCACCTTCTGGAATCTATGCACCAGTAGCCACACATCCTCAAGTTGCTACAATTAAGAAACCAGAGTTCAAGAGGTTTGAGCATTCAATCTCAGATGAAAGGGGTAATAACAGTGAAGGTGCTGTTCATTCAAATTCACCTACATCTTCATCCTCTACACATACTACTACCAATACTTCCCCTGGTTATTGA

Protein sequence

>Msa0036610

MQRFKMGFSDYIQALEQERRKIQVFPKELPLSLELVTQAIEACRQQLSGTTTEYNLNGQSECSEQTTSTDGPVLEEFIPIKKRASSYSQEVFDDVEDYDQHFHHKQQKLSLDNKKKSDWLRSVQLWNSDPSSEEDVTKKTVPVLELKRNGSGGGAFHPFHKEDRVNNKTSELLSKGQPSSTGVAAVSSNAANVTSNNVGDIKRDEKEEKRKQRRCWSQELHKRFLKALQQLGGADCATPKQIREVMNVDGLTNDEVKSHLQKYRLHTRRPSSTNNESANSQTAAPFVLVGNIFVQQQEYGGVASSTTTGEMTKVVAPSGIYAPVATHPQVATIKKPEFKRFEHSISDERGNNSEGAVHSNSPTSSSSTHTTTNTSPGY*