Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054730 | XP_039684288.1 | 88.344 | 163 | 13 | 1 | 1 | 157 | 1 | 163 | 5.89e-97 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054730 | A0A396GV32 | 88.344 | 163 | 13 | 1 | 1 | 157 | 1 | 163 | 2.81e-97 | 291 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0429210 | Msa1054730 | 0.805794 | 1.123988e-49 | -8.615850e-47 |
| Msa1054730 | Msa1150500 | 0.813524 | 2.450496e-51 | -8.615850e-47 |
| Msa0508870 | Msa1054730 | 0.809335 | 1.990985e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054730 | MtrunA17_Chr7g0225391 | 88.344 | 163 | 13 | 1 | 1 | 157 | 1 | 163 | 5.42e-101 | 291 |
| Msa1054730 | MtrunA17_Chr7g0225271 | 87.730 | 163 | 14 | 1 | 1 | 157 | 1 | 163 | 2.89e-100 | 290 |
| Msa1054730 | MtrunA17_Chr2g0291271 | 88.462 | 52 | 5 | 1 | 145 | 196 | 237 | 287 | 1.02e-20 | 90.9 |
| Msa1054730 | MtrunA17_Chr1g0171231 | 82.051 | 39 | 7 | 0 | 10 | 48 | 1 | 39 | 7.00e-15 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054730 | AT3G27050.1 | 72.414 | 145 | 40 | 0 | 1 | 145 | 1 | 145 | 5.03e-66 | 203 |
Find 49 sgRNAs with CRISPR-Local
Find 585 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCAGTGGAATGTTAATT+AGG | 0.186406 | 7_2:-27056264 | Msa1054730:CDS |
| AAGGATTGTTGATGCTGTTT+TGG | 0.308938 | 7_2:-27056069 | Msa1054730:CDS |
| GCTGTTTGGACCTCACAGTT+GGG | 0.321392 | 7_2:-27048979 | Msa1054730:CDS |
| TTGGTTGCTGCCTGCAGGGT+GGG | 0.341091 | 7_2:-27049027 | Msa1054730:CDS |
| CTGGGTGTGCCTCTGCTGTT+TGG | 0.342823 | 7_2:-27048993 | Msa1054730:CDS |
| AGGATTTGGTATTTCATGTC+TGG | 0.352762 | 7_2:-27053817 | Msa1054730:CDS |
| AGTGCATAGTGTTGCTGTTC+TGG | 0.354254 | 7_2:-27049131 | Msa1054730:CDS |
| TATACAACAGACCCAGGATT+TGG | 0.357173 | 7_2:-27053831 | Msa1054730:intron |
| CTAGTAAGTGCAACAACATT+AGG | 0.362257 | 7_2:+27049202 | None:intergenic |
| TGTTGCACTTACTAGTGTTT+TGG | 0.362954 | 7_2:-27049194 | Msa1054730:CDS |
| TGCTGTTTGGACCTCACAGT+TGG | 0.370928 | 7_2:-27048980 | Msa1054730:CDS |
| AGTGTTGCTGTTCTGGTAGA+AGG | 0.373712 | 7_2:-27049124 | Msa1054730:CDS |
| TCTGCTTGGTTGCTGCCTGC+AGG | 0.374903 | 7_2:-27049032 | Msa1054730:CDS |
| GCGCCATCAACAAAACTTAC+AGG | 0.388338 | 7_2:-27052993 | Msa1054730:CDS |
| AAGATTCGTTAAGCTTTGTT+TGG | 0.392087 | 7_2:-27056336 | Msa1054730:five_prime_UTR |
| AGAATTGAATCACCAAATCT+TGG | 0.402380 | 7_2:+27053766 | None:intergenic |
| CTGCTTGGTTGCTGCCTGCA+GGG | 0.411575 | 7_2:-27049031 | Msa1054730:CDS |
| AAGCAGTGGAATGTTAATTA+GGG | 0.417701 | 7_2:-27056263 | Msa1054730:CDS |
| CTGTTTGGACCTCACAGTTG+GGG | 0.428965 | 7_2:-27048978 | Msa1054730:CDS |
| GAGGAGTCGGATTTGTTGAC+TGG | 0.433055 | 7_2:-27049160 | Msa1054730:CDS |
| TGCTGTGACCACTGCAATAC+AGG | 0.441123 | 7_2:-27055273 | Msa1054730:CDS |
| TGGTTGCTGCCTGCAGGGTG+GGG | 0.446489 | 7_2:-27049026 | Msa1054730:CDS |
| GCACATGCGCAACTTTAACT+TGG | 0.460504 | 7_2:-27052842 | Msa1054730:CDS |
| GGATTTGGTATTTCATGTCT+GGG | 0.480524 | 7_2:-27053816 | Msa1054730:CDS |
| AGACATGAAATACCAAATCC+TGG | 0.485880 | 7_2:+27053819 | None:intergenic |
| GGCGTTTAAAGTTATGAGCT+TGG | 0.486562 | 7_2:-27049230 | Msa1054730:CDS |
| GTATCAGCAGCTGTTCTGCT+TGG | 0.489707 | 7_2:-27049046 | Msa1054730:CDS |
| GCCTGCGATGAAGCAGAGCT+TGG | 0.490910 | 7_2:-27053040 | Msa1054730:CDS |
| GGTTTGTTGCTCTGAGGAGT+CGG | 0.498102 | 7_2:-27049173 | Msa1054730:CDS |
| TCCAAGCTCTGCTTCATCGC+AGG | 0.506298 | 7_2:+27053039 | None:intergenic |
| ATATGAGAATGACCAAGATT+TGG | 0.510384 | 7_2:-27053778 | Msa1054730:CDS |
| CTTGGTTGCTGCCTGCAGGG+TGG | 0.513027 | 7_2:-27049028 | Msa1054730:CDS |
| TATTTGAAGATGTGAAGAAA+AGG | 0.529621 | 7_2:-27056088 | Msa1054730:intron |
| GTGAAATGTCAGAGAAGAGA+TGG | 0.547425 | 7_2:-27053062 | Msa1054730:intron |
| TAGAGAGAACTTACTGGGCA+AGG | 0.551886 | 7_2:+27053736 | None:intergenic |
| GACATGAAATACCAAATCCT+GGG | 0.577812 | 7_2:+27053820 | None:intergenic |
| GTAGAAAACTCCACTACAGC+AGG | 0.583904 | 7_2:+27049093 | None:intergenic |
| GTTGTTGCACAGCCTCACTC+AGG | 0.585995 | 7_2:+27048926 | None:intergenic |
| AGTGTGCTTATTTCACAACC+TGG | 0.587246 | 7_2:-27056211 | Msa1054730:intron |
| TATTTCTTCCTGTATTGCAG+TGG | 0.588165 | 7_2:+27055265 | None:intergenic |
| GACTAGTGTTCACCTTCTCA+AGG | 0.590938 | 7_2:+27052803 | None:intergenic |
| TCTGCTGTCACACCTGAGTG+AGG | 0.594971 | 7_2:-27048938 | None:intergenic |
| GCTTCTGAAACTCAAAGCAG+TGG | 0.597265 | 7_2:-27056277 | Msa1054730:CDS |
| TGTTTGGACCTCACAGTTGG+GGG | 0.602892 | 7_2:-27048977 | Msa1054730:CDS |
| AGTGTTCACCTTCTCAAGGA+TGG | 0.604929 | 7_2:+27052807 | None:intergenic |
| AGGAGTCGGATTTGTTGACT+GGG | 0.612855 | 7_2:-27049159 | Msa1054730:CDS |
| TCAATCTGCCATCCTTGAGA+AGG | 0.618555 | 7_2:-27052815 | Msa1054730:intron |
| TAAGAATGGGAGATATCGTG+AGG | 0.680798 | 7_2:-27049251 | Msa1054730:intron |
| CTGTGAGGTCCAAACAGCAG+AGG | 0.683025 | 7_2:+27048984 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAGATTATTCAAAA+CGG | + | chr7_2:27049134-27049153 | None:intergenic | 10.0% |
| !!! | AAACATTTTAAGTTTTTAAT+TGG | - | chr7_2:27049543-27049562 | Msa1054730:intron | 10.0% |
| !! | TATTGAAATATATAAGTTAT+TGG | - | chr7_2:27050079-27050098 | Msa1054730:intron | 10.0% |
| !! | TTTATAAAAAATTGAAATAC+TGG | - | chr7_2:27051092-27051111 | Msa1054730:intron | 10.0% |
| !!! | TTTTATTTATTTTAGTATTC+TGG | - | chr7_2:27052011-27052030 | Msa1054730:intron | 10.0% |
| !!! | TAGATTGATTTTTTTTTTTT+TGG | + | chr7_2:27052076-27052095 | None:intergenic | 10.0% |
| !! | AAGAAACTGAAATAAAATTA+GGG | + | chr7_2:27049107-27049126 | None:intergenic | 15.0% |
| !! | AAAGAAACTGAAATAAAATT+AGG | + | chr7_2:27049108-27049127 | None:intergenic | 15.0% |
| !! | AAAAATAGATTATTCAAAAC+GGG | + | chr7_2:27049133-27049152 | None:intergenic | 15.0% |
| !! | TGCAAAAAAAAAATCAAAAA+GGG | + | chr7_2:27049162-27049181 | None:intergenic | 15.0% |
| !! | TTGCAAAAAAAAAATCAAAA+AGG | + | chr7_2:27049163-27049182 | None:intergenic | 15.0% |
| !!! | TTGATTTTTTTTTTGCAATA+TGG | - | chr7_2:27049165-27049184 | Msa1054730:CDS | 15.0% |
| !!! | TTTAAGTTTTTAATTGGTAA+TGG | - | chr7_2:27049549-27049568 | Msa1054730:intron | 15.0% |
| !! | AAATATACGAAGAAATATTT+GGG | + | chr7_2:27050514-27050533 | None:intergenic | 15.0% |
| !!! | TTTTATATCATATTATTGCA+TGG | - | chr7_2:27052609-27052628 | Msa1054730:intron | 15.0% |
| !!! | TTGCTTTAAAAATTGATATA+AGG | - | chr7_2:27053821-27053840 | Msa1054730:CDS | 15.0% |
| !! | TTTAAAAATTGATATAAGGA+AGG | - | chr7_2:27053825-27053844 | Msa1054730:intron | 15.0% |
| !!! | NNNNNTTTGAATGTGTTTTT+TGG | - | chr7_2:27055962-27055981 | Msa1054730:intron | 15.0% |
| !!! | TTCTTTTTGTGAATTGTTAA+TGG | - | chr7_2:27048991-27049010 | Msa1054730:CDS | 20.0% |
| !! | TGTTAGGTAAAATTTCTATT+TGG | - | chr7_2:27049311-27049330 | Msa1054730:intron | 20.0% |
| !! | GTTAGGTAAAATTTCTATTT+GGG | - | chr7_2:27049312-27049331 | Msa1054730:intron | 20.0% |
| !! | AGTCTGTATTTGAAAATAAT+TGG | - | chr7_2:27049469-27049488 | Msa1054730:intron | 20.0% |
| !!! | TTTTTAATTGGTAATGGTAA+TGG | - | chr7_2:27049555-27049574 | Msa1054730:intron | 20.0% |
| !! | TAATGGTAATAAATCAAACA+GGG | - | chr7_2:27049572-27049591 | Msa1054730:intron | 20.0% |
| !!! | CTGAAATGTGTTTTTTTTAA+TGG | - | chr7_2:27049643-27049662 | Msa1054730:intron | 20.0% |
| !! | GAAAATGAAAATACAAAACA+TGG | - | chr7_2:27049785-27049804 | Msa1054730:intron | 20.0% |
| !!! | AATACAGGAAGAAATATTTT+TGG | - | chr7_2:27050032-27050051 | Msa1054730:intron | 20.0% |
| !! | TTTCATATAATTTATCTGTG+TGG | - | chr7_2:27050136-27050155 | Msa1054730:intron | 20.0% |
| !! | AATATACGAAGAAATATTTG+GGG | + | chr7_2:27050513-27050532 | None:intergenic | 20.0% |
| !! | GAAATATACGAAGAAATATT+TGG | + | chr7_2:27050515-27050534 | None:intergenic | 20.0% |
| !!! | TCTTACATGAATTTTAGTTT+TGG | - | chr7_2:27050643-27050662 | Msa1054730:intron | 20.0% |
| !!! | CTTACATGAATTTTAGTTTT+GGG | - | chr7_2:27050644-27050663 | Msa1054730:intron | 20.0% |
| !!! | TTACATGAATTTTAGTTTTG+GGG | - | chr7_2:27050645-27050664 | Msa1054730:intron | 20.0% |
| !!! | TGTTTTTTTTTTCATGTTTG+AGG | - | chr7_2:27051953-27051972 | Msa1054730:intron | 20.0% |
| !!! | GTTTTTTTTTTCATGTTTGA+GGG | - | chr7_2:27051954-27051973 | Msa1054730:intron | 20.0% |
| !!! | AACAGTTTTTTAATGCAAAA+AGG | - | chr7_2:27052188-27052207 | Msa1054730:intron | 20.0% |
| !!! | ACAGTTTTTTAATGCAAAAA+GGG | - | chr7_2:27052189-27052208 | Msa1054730:intron | 20.0% |
| !! | ATTTCACAATTCTTAGTATA+AGG | + | chr7_2:27052215-27052234 | None:intergenic | 20.0% |
| !! | TAGTTATAAATAGTCTACTA+GGG | - | chr7_2:27052753-27052772 | Msa1054730:intron | 20.0% |
| !! | TTAGCATTTCTATGAAAAAA+AGG | + | chr7_2:27053175-27053194 | None:intergenic | 20.0% |
| !! | CAAAATTATTACCAAGATAA+TGG | - | chr7_2:27053657-27053676 | Msa1054730:intron | 20.0% |
| !! | AATTATCTCTATCTATCAAA+GGG | - | chr7_2:27053708-27053727 | Msa1054730:intron | 20.0% |
| !!! | TTTTTTGAGCATTTACAATT+TGG | + | chr7_2:27054245-27054264 | None:intergenic | 20.0% |
| !! | AGATAAAATGGAATTAAACA+TGG | + | chr7_2:27055576-27055595 | None:intergenic | 20.0% |
| !!! | ATATTCCAATGCAAATTTTT+TGG | - | chr7_2:27055814-27055833 | Msa1054730:intron | 20.0% |
| !!! | TATTCCAATGCAAATTTTTT+GGG | - | chr7_2:27055815-27055834 | Msa1054730:intron | 20.0% |
| ! | TATTTGAAGATGTGAAGAAA+AGG | - | chr7_2:27049202-27049221 | Msa1054730:CDS | 25.0% |
| ! | TAATAGTCATAAACCAAACA+GGG | - | chr7_2:27049492-27049511 | Msa1054730:intron | 25.0% |
| ! | GTAATGGTAATAAATCAAAC+AGG | - | chr7_2:27049571-27049590 | Msa1054730:intron | 25.0% |
| !!! | TTTTTTAATGGCTAATGAGA+TGG | - | chr7_2:27049655-27049674 | Msa1054730:intron | 25.0% |
| !! | AAACATGGAAAGAATAGTTT+TGG | - | chr7_2:27049800-27049819 | Msa1054730:intron | 25.0% |
| ! | ACATAAGTATAATGTGAAAC+AGG | + | chr7_2:27049930-27049949 | None:intergenic | 25.0% |
| !!! | GAAGAAATATTTTTGGAGAT+GGG | - | chr7_2:27050039-27050058 | Msa1054730:intron | 25.0% |
| !! | ATAAGTTATTGGTTGTACTT+TGG | - | chr7_2:27050090-27050109 | Msa1054730:intron | 25.0% |
| !! | TAAGTTATTGGTTGTACTTT+GGG | - | chr7_2:27050091-27050110 | Msa1054730:intron | 25.0% |
| !! | AATTTTGAACTAGTCATTGA+TGG | - | chr7_2:27050304-27050323 | Msa1054730:intron | 25.0% |
| !! | ATGGATTATGATGTAGTATT+AGG | - | chr7_2:27050323-27050342 | Msa1054730:intron | 25.0% |
| ! | AGAAAATAAAACCTCATACA+GGG | + | chr7_2:27050439-27050458 | None:intergenic | 25.0% |
| ! | ATATACGAAGAAATATTTGG+GGG | + | chr7_2:27050512-27050531 | None:intergenic | 25.0% |
| !!! | ATTTTAGTTTTGGGGATTTT+TGG | - | chr7_2:27050653-27050672 | Msa1054730:intron | 25.0% |
| !! | TTTATTTCAAGTGTTGTCAA+GGG | + | chr7_2:27050693-27050712 | None:intergenic | 25.0% |
| ! | TTGACAACACTTGAAATAAA+GGG | - | chr7_2:27050693-27050712 | Msa1054730:intron | 25.0% |
| ! | TAAATCACATAATTAGTGAC+TGG | + | chr7_2:27050905-27050924 | None:intergenic | 25.0% |
| ! | GTCACTAATTATGTGATTTA+TGG | - | chr7_2:27050905-27050924 | Msa1054730:intron | 25.0% |
| ! | AGTTAATTGAATTCTTTCAC+TGG | - | chr7_2:27051166-27051185 | Msa1054730:intron | 25.0% |
| ! | CAAGTCAATAAAAGTAAACT+GGG | + | chr7_2:27051244-27051263 | None:intergenic | 25.0% |
| ! | ACAAGTCAATAAAAGTAAAC+TGG | + | chr7_2:27051245-27051264 | None:intergenic | 25.0% |
| ! | AACAATCTGTGTATCAAAAT+AGG | + | chr7_2:27051373-27051392 | None:intergenic | 25.0% |
| ! | AATGAAGAGAAAATGTTAAC+AGG | + | chr7_2:27051610-27051629 | None:intergenic | 25.0% |
| ! | AGAAGTTAAATAAAAAACGC+AGG | - | chr7_2:27051726-27051745 | Msa1054730:intron | 25.0% |
| ! | GAAGTTAAATAAAAAACGCA+GGG | - | chr7_2:27051727-27051746 | Msa1054730:intron | 25.0% |
| ! | ACTTTAGTCATATTTGCTTA+GGG | + | chr7_2:27051768-27051787 | None:intergenic | 25.0% |
| ! | AACTTTAGTCATATTTGCTT+AGG | + | chr7_2:27051769-27051788 | None:intergenic | 25.0% |
| !!! | GCACTGTTTTTATTGAATTA+TGG | - | chr7_2:27052522-27052541 | Msa1054730:intron | 25.0% |
| !! | TTGAATTATGGATTATCCAA+CGG | - | chr7_2:27052534-27052553 | Msa1054730:intron | 25.0% |
| !!! | TATTGCATGGTATTTGATTT+TGG | - | chr7_2:27052622-27052641 | Msa1054730:intron | 25.0% |
| ! | TCAGATGCATTTGATATTTA+TGG | + | chr7_2:27052649-27052668 | None:intergenic | 25.0% |
| ! | TAAATATCAAATGCATCTGA+TGG | - | chr7_2:27052649-27052668 | Msa1054730:intron | 25.0% |
| !! | ATTACAAGTATTTCTGTGAA+TGG | - | chr7_2:27052679-27052698 | Msa1054730:intron | 25.0% |
| !! | TTACAAGTATTTCTGTGAAT+GGG | - | chr7_2:27052680-27052699 | Msa1054730:intron | 25.0% |
| ! | TAAATAAATGTAAGAGCGAT+TGG | - | chr7_2:27052718-27052737 | Msa1054730:intron | 25.0% |
| ! | GTAGTTATAAATAGTCTACT+AGG | - | chr7_2:27052752-27052771 | Msa1054730:intron | 25.0% |
| !! | AAGAGATTGGAATTTAAGTT+TGG | + | chr7_2:27053562-27053581 | None:intergenic | 25.0% |
| ! | GAATTATCTCTATCTATCAA+AGG | - | chr7_2:27053707-27053726 | Msa1054730:intron | 25.0% |
| ! | ATTATCTCTATCTATCAAAG+GGG | - | chr7_2:27053709-27053728 | Msa1054730:intron | 25.0% |
| ! | TTGTTACATAAGAAAGCTTA+TGG | - | chr7_2:27053790-27053809 | Msa1054730:CDS | 25.0% |
| ! | AAAAAAGCAAATTCTACACT+GGG | - | chr7_2:27054259-27054278 | Msa1054730:intron | 25.0% |
| ! | ACTCTTTCCATGTTTATAAA+TGG | - | chr7_2:27054514-27054533 | Msa1054730:intron | 25.0% |
| ! | GTTCAAAAATGAAACTAATG+TGG | + | chr7_2:27054836-27054855 | None:intergenic | 25.0% |
| !!! | TTTCTAAGATTTTCATCAGT+AGG | + | chr7_2:27055263-27055282 | None:intergenic | 25.0% |
| ! | GATGAAAATCTTAGAAAAAG+AGG | - | chr7_2:27055266-27055285 | Msa1054730:CDS | 25.0% |
| ! | ACATTCAAAGAAAATATGCT+GGG | + | chr7_2:27055342-27055361 | None:intergenic | 25.0% |
| ! | TACATTCAAAGAAAATATGC+TGG | + | chr7_2:27055343-27055362 | None:intergenic | 25.0% |
| !! | AGCATATTTTCTTTGAATGT+AGG | - | chr7_2:27055342-27055361 | Msa1054730:intron | 25.0% |
| !! | GCATATTTTCTTTGAATGTA+GGG | - | chr7_2:27055343-27055362 | Msa1054730:intron | 25.0% |
| ! | AGCAATTATTCACACTATTT+GGG | - | chr7_2:27055493-27055512 | Msa1054730:intron | 25.0% |
| ! | TAAAATGGAATTAAACATGG+TGG | + | chr7_2:27055573-27055592 | None:intergenic | 25.0% |
| ! | GTGTTATATCTAGTAACATT+GGG | - | chr7_2:27055837-27055856 | Msa1054730:intron | 25.0% |
| !!! | AATGTGTTTTTTGGTTTGAA+AGG | - | chr7_2:27055971-27055990 | Msa1054730:intron | 25.0% |
| ! | TTTATGGGTGTATTAAGAAT+GGG | - | chr7_2:27056026-27056045 | Msa1054730:intron | 25.0% |
| !! | AAGATTCGTTAAGCTTTGTT+TGG | - | chr7_2:27048954-27048973 | Msa1054730:CDS | 30.0% |
| AAAGCAGTGGAATGTTAATT+AGG | - | chr7_2:27049026-27049045 | Msa1054730:CDS | 30.0% | |
| AAGCAGTGGAATGTTAATTA+GGG | - | chr7_2:27049027-27049046 | Msa1054730:CDS | 30.0% | |
| ! | TGAAATAAAATTAGGGTACC+AGG | + | chr7_2:27049100-27049119 | None:intergenic | 30.0% |
| ATAAGCAGGTAAATTTCTTC+TGG | - | chr7_2:27049244-27049263 | Msa1054730:CDS | 30.0% | |
| TAAGCAGGTAAATTTCTTCT+GGG | - | chr7_2:27049245-27049264 | Msa1054730:CDS | 30.0% | |
| ! | TGAAGAATCTTTCTAGAAAC+TGG | + | chr7_2:27049350-27049369 | None:intergenic | 30.0% |
| ! | AGATGCACTTTTGATATAAC+TGG | - | chr7_2:27049378-27049397 | Msa1054730:intron | 30.0% |
| GTAATAGTCATAAACCAAAC+AGG | - | chr7_2:27049491-27049510 | Msa1054730:intron | 30.0% | |
| TACAAGTCTATTTGAATGTC+AGG | - | chr7_2:27049885-27049904 | Msa1054730:intron | 30.0% | |
| GAAAGTCAATTTGTAATGTG+TGG | - | chr7_2:27049953-27049972 | Msa1054730:intron | 30.0% | |
| !!! | GGAAGAAATATTTTTGGAGA+TGG | - | chr7_2:27050038-27050057 | Msa1054730:intron | 30.0% |
| ! | GATGTAGTATTAGGTTTTTG+AGG | - | chr7_2:27050332-27050351 | Msa1054730:intron | 30.0% |
| GATGTAGATACAACAAAAAG+GGG | + | chr7_2:27050401-27050420 | None:intergenic | 30.0% | |
| CGATGTAGATACAACAAAAA+GGG | + | chr7_2:27050402-27050421 | None:intergenic | 30.0% | |
| TCGATGTAGATACAACAAAA+AGG | + | chr7_2:27050403-27050422 | None:intergenic | 30.0% | |
| GAGAAAATAAAACCTCATAC+AGG | + | chr7_2:27050440-27050459 | None:intergenic | 30.0% | |
| TATACGAAGAAATATTTGGG+GGG | + | chr7_2:27050511-27050530 | None:intergenic | 30.0% | |
| ! | CTTTATTTCAAGTGTTGTCA+AGG | + | chr7_2:27050694-27050713 | None:intergenic | 30.0% |
| CTTGACAACACTTGAAATAA+AGG | - | chr7_2:27050692-27050711 | Msa1054730:intron | 30.0% | |
| ! | TGAGTTTCAGTGGATTTAAA+TGG | - | chr7_2:27050751-27050770 | Msa1054730:intron | 30.0% |
| TATGTACTACTACTGGTATA+AGG | - | chr7_2:27051117-27051136 | Msa1054730:intron | 30.0% | |
| ATTCTTTCACTGGAAAGATA+AGG | - | chr7_2:27051176-27051195 | Msa1054730:intron | 30.0% | |
| TTCTTTCACTGGAAAGATAA+GGG | - | chr7_2:27051177-27051196 | Msa1054730:intron | 30.0% | |
| TCAATAAAAGTAAACTGGGA+GGG | + | chr7_2:27051240-27051259 | None:intergenic | 30.0% | |
| ATATGAGAATGACCAAGATT+TGG | - | chr7_2:27051512-27051531 | Msa1054730:intron | 30.0% | |
| AGAATTGAATCACCAAATCT+TGG | + | chr7_2:27051527-27051546 | None:intergenic | 30.0% | |
| AAAGATAGAGAGAACTTACT+GGG | + | chr7_2:27051562-27051581 | None:intergenic | 30.0% | |
| AAAAGATAGAGAGAACTTAC+TGG | + | chr7_2:27051563-27051582 | None:intergenic | 30.0% | |
| AGCTAGAAAATATATTGGCA+TGG | + | chr7_2:27051660-27051679 | None:intergenic | 30.0% | |
| CACTCAGCTAGAAAATATAT+TGG | + | chr7_2:27051665-27051684 | None:intergenic | 30.0% | |
| !!! | CAATATATTTTCTAGCTGAG+TGG | - | chr7_2:27051663-27051682 | Msa1054730:intron | 30.0% |
| ! | TACTCACAAAGGTTTTTGTT+TGG | - | chr7_2:27051702-27051721 | Msa1054730:intron | 30.0% |
| ATGACTAAAGTTATGTTGAG+TGG | - | chr7_2:27051777-27051796 | Msa1054730:intron | 30.0% | |
| !!! | TGTCTTTTTTCAACATACAG+TGG | - | chr7_2:27051843-27051862 | Msa1054730:intron | 30.0% |
| !!! | GTCTTTTTTCAACATACAGT+GGG | - | chr7_2:27051844-27051863 | Msa1054730:intron | 30.0% |
| TTATGCTTAGGTTACATATC+AGG | - | chr7_2:27051873-27051892 | Msa1054730:intron | 30.0% | |
| AACTTATTCCAACCAATATG+AGG | + | chr7_2:27051930-27051949 | None:intergenic | 30.0% | |
| !! | CTGTTTCTAAACAACTAATC+TGG | - | chr7_2:27052040-27052059 | Msa1054730:intron | 30.0% |
| TAGATAGCTTCGAAAAGTTT+AGG | + | chr7_2:27052110-27052129 | None:intergenic | 30.0% | |
| CTCTTATCTCTACACAAAAA+AGG | - | chr7_2:27052158-27052177 | Msa1054730:intron | 30.0% | |
| ! | TACTAGGGATTTGTTCATTT+GGG | - | chr7_2:27052768-27052787 | Msa1054730:intron | 30.0% |
| TTGAAGTGAAGAATATGCAT+AGG | + | chr7_2:27052898-27052917 | None:intergenic | 30.0% | |
| GAAACTATTCAGTAAAGTCA+GGG | + | chr7_2:27053100-27053119 | None:intergenic | 30.0% | |
| AGAAACTATTCAGTAAAGTC+AGG | + | chr7_2:27053101-27053120 | None:intergenic | 30.0% | |
| TGACTTTACTGAATAGTTTC+TGG | - | chr7_2:27053100-27053119 | Msa1054730:intron | 30.0% | |
| ! | TTTACTGAATAGTTTCTGGA+AGG | - | chr7_2:27053104-27053123 | Msa1054730:intron | 30.0% |
| AAAAACACTAGATTCCTTGA+GGG | - | chr7_2:27053135-27053154 | Msa1054730:intron | 30.0% | |
| TCTGTGGAATGTATCTATTA+GGG | + | chr7_2:27053339-27053358 | None:intergenic | 30.0% | |
| ATCTGTGGAATGTATCTATT+AGG | + | chr7_2:27053340-27053359 | None:intergenic | 30.0% | |
| TTCTTGATTTCTTCATACTG+AGG | + | chr7_2:27053400-27053419 | None:intergenic | 30.0% | |
| TCAGTATGAAGAAATCAAGA+AGG | - | chr7_2:27053399-27053418 | Msa1054730:intron | 30.0% | |
| CAATTATATGCCAAAACTGA+TGG | + | chr7_2:27053486-27053505 | None:intergenic | 30.0% | |
| !! | CATCAGTTTTGGCATATAAT+TGG | - | chr7_2:27053484-27053503 | Msa1054730:intron | 30.0% |
| !! | GTTGTGCATAAAGAAGTATT+GGG | + | chr7_2:27053530-27053549 | None:intergenic | 30.0% |
| ! | AGTTGTGCATAAAGAAGTAT+TGG | + | chr7_2:27053531-27053550 | None:intergenic | 30.0% |
| TTTGAACTGAAAGTTTGCAA+GGG | + | chr7_2:27053641-27053660 | None:intergenic | 30.0% | |
| ! | TTTTGAACTGAAAGTTTGCA+AGG | + | chr7_2:27053642-27053661 | None:intergenic | 30.0% |
| TTACATAAGAAAGCTTATGG+AGG | - | chr7_2:27053793-27053812 | Msa1054730:CDS | 30.0% | |
| ATTCATGATGTTCCTTATGT+TGG | + | chr7_2:27054193-27054212 | None:intergenic | 30.0% | |
| CAAAAAAGCAAATTCTACAC+TGG | - | chr7_2:27054258-27054277 | Msa1054730:intron | 30.0% | |
| AAAAAGCAAATTCTACACTG+GGG | - | chr7_2:27054260-27054279 | Msa1054730:intron | 30.0% | |
| AGTTTGCCTTTCAATTATCT+AGG | - | chr7_2:27054339-27054358 | Msa1054730:intron | 30.0% | |
| AGAATGCCTAGATAATTGAA+AGG | + | chr7_2:27054348-27054367 | None:intergenic | 30.0% | |
| ATTTCAGATAACAAACTTGC+AGG | + | chr7_2:27054540-27054559 | None:intergenic | 30.0% | |
| !! | GTTTGTTATCTGAAATAGCA+AGG | - | chr7_2:27054544-27054563 | Msa1054730:intron | 30.0% |
| ATGAGAAATTTCATTTGGAG+TGG | - | chr7_2:27054570-27054589 | Msa1054730:intron | 30.0% | |
| AAAAAATATGCACTGTTGCT+TGG | - | chr7_2:27054607-27054626 | Msa1054730:intron | 30.0% | |
| !!! | GAAGTTATATGATGGGTTTT+AGG | + | chr7_2:27054789-27054808 | None:intergenic | 30.0% |
| CACAGATGAAGTTATATGAT+GGG | + | chr7_2:27054796-27054815 | None:intergenic | 30.0% | |
| ACACAGATGAAGTTATATGA+TGG | + | chr7_2:27054797-27054816 | None:intergenic | 30.0% | |
| ATCATATAACTTCATCTGTG+TGG | - | chr7_2:27054796-27054815 | Msa1054730:intron | 30.0% | |
| !! | TCATTTTTGAACATGCTACT+TGG | - | chr7_2:27054844-27054863 | Msa1054730:intron | 30.0% |
| !! | ATCAGCAACTTTTAACTCTA+TGG | + | chr7_2:27054967-27054986 | None:intergenic | 30.0% |
| ! | TCCTTTTGCACAATATAATC+AGG | + | chr7_2:27055017-27055036 | None:intergenic | 30.0% |
| !!! | TGTCAATTTTCTGTTTCTGT+TGG | - | chr7_2:27055300-27055319 | Msa1054730:intron | 30.0% |
| !!! | GTCAATTTTCTGTTTCTGTT+GGG | - | chr7_2:27055301-27055320 | Msa1054730:intron | 30.0% |
| ATACAGTCTGTATGATCTAT+AGG | + | chr7_2:27055413-27055432 | None:intergenic | 30.0% | |
| CAGCAATTATTCACACTATT+TGG | - | chr7_2:27055492-27055511 | Msa1054730:intron | 30.0% | |
| ! | GAGTTTGACTTCAGATAAAA+TGG | + | chr7_2:27055588-27055607 | None:intergenic | 30.0% |
| AACACCCAAAAAATTTGCAT+TGG | + | chr7_2:27055822-27055841 | None:intergenic | 30.0% | |
| ! | GGTGTTATATCTAGTAACAT+TGG | - | chr7_2:27055836-27055855 | Msa1054730:intron | 30.0% |
| !!! | TGTTTTTTGGTTTGAAAGGA+TGG | - | chr7_2:27055975-27055994 | Msa1054730:intron | 30.0% |
| TGATATGATGCATAATTCGT+TGG | - | chr7_2:27056003-27056022 | Msa1054730:intron | 30.0% | |
| !! | ATGCATAATTCGTTGGTTTA+TGG | - | chr7_2:27056010-27056029 | Msa1054730:intron | 30.0% |
| !! | TGCATAATTCGTTGGTTTAT+GGG | - | chr7_2:27056011-27056030 | Msa1054730:intron | 30.0% |
| GTTTATGGGTGTATTAAGAA+TGG | - | chr7_2:27056025-27056044 | Msa1054730:intron | 30.0% | |
| GCAATATGGTTGTGTATGTA+TGG | - | chr7_2:27049179-27049198 | Msa1054730:CDS | 35.0% | |
| !! | AAGGATTGTTGATGCTGTTT+TGG | - | chr7_2:27049221-27049240 | Msa1054730:CDS | 35.0% |
| CTGTGTTCTTCTTCAATGTT+AGG | - | chr7_2:27049295-27049314 | Msa1054730:intron | 35.0% | |
| TTCAAATACAGACTCAGATC+TGG | + | chr7_2:27049463-27049482 | None:intergenic | 35.0% | |
| CATAGTGTTAAGTGGTAACA+GGG | - | chr7_2:27049595-27049614 | Msa1054730:intron | 35.0% | |
| !! | TAGTGTGAAGTGGTTGTTTT+TGG | - | chr7_2:27049620-27049639 | Msa1054730:intron | 35.0% |
| !! | TTTGGTTGGCTGTAGTTTTA+TGG | - | chr7_2:27049837-27049856 | Msa1054730:intron | 35.0% |
| TATTTCTTCCTGTATTGCAG+TGG | + | chr7_2:27050028-27050047 | None:intergenic | 35.0% | |
| !!! | ATATTTTTGGAGATGGGTGT+TGG | - | chr7_2:27050045-27050064 | Msa1054730:intron | 35.0% |
| ! | TATTGGTTGTACTTTGGGTT+TGG | - | chr7_2:27050096-27050115 | Msa1054730:intron | 35.0% |
| ATACGAAGAAATATTTGGGG+GGG | + | chr7_2:27050510-27050529 | None:intergenic | 35.0% | |
| !! | AAGCTTGAGCTTGTTGTATT+GGG | - | chr7_2:27050547-27050566 | Msa1054730:intron | 35.0% |
| ACAACACTTGAAATAAAGGG+TGG | - | chr7_2:27050696-27050715 | Msa1054730:intron | 35.0% | |
| TTAAATCCACTGAAACTCAC+AGG | + | chr7_2:27050750-27050769 | None:intergenic | 35.0% | |
| ! | GATGGTGTTTGATGGTAAAT+AGG | + | chr7_2:27050962-27050981 | None:intergenic | 35.0% |
| ATTTACCATCAAACACCATC+AGG | - | chr7_2:27050962-27050981 | Msa1054730:intron | 35.0% | |
| AATTCCTTGCTCCTGTTATT+AGG | - | chr7_2:27051012-27051031 | Msa1054730:intron | 35.0% | |
| ACTGGATTATGTACTACTAC+TGG | - | chr7_2:27051110-27051129 | Msa1054730:intron | 35.0% | |
| AGGGAATTGTAACAGATCTA+GGG | + | chr7_2:27051211-27051230 | None:intergenic | 35.0% | |
| GTCAATAAAAGTAAACTGGG+AGG | + | chr7_2:27051241-27051260 | None:intergenic | 35.0% | |
| GGTGTTAGTTACATAGATGA+AGG | + | chr7_2:27051270-27051289 | None:intergenic | 35.0% | |
| TTTGTTTATACAACAGACCC+AGG | - | chr7_2:27051453-27051472 | Msa1054730:intron | 35.0% | |
| GACATGAAATACCAAATCCT+GGG | + | chr7_2:27051473-27051492 | None:intergenic | 35.0% | |
| AGACATGAAATACCAAATCC+TGG | + | chr7_2:27051474-27051493 | None:intergenic | 35.0% | |
| ! | AGGATTTGGTATTTCATGTC+TGG | - | chr7_2:27051473-27051492 | Msa1054730:intron | 35.0% |
| ! | GGATTTGGTATTTCATGTCT+GGG | - | chr7_2:27051474-27051493 | Msa1054730:intron | 35.0% |
| TAGCTGAGTGGAAAAATGAA+AGG | - | chr7_2:27051675-27051694 | Msa1054730:intron | 35.0% | |
| !! | TGAAAGGTACTTACTCACAA+AGG | - | chr7_2:27051691-27051710 | Msa1054730:intron | 35.0% |
| TCATATTTGCTTAGGGACTA+GGG | + | chr7_2:27051761-27051780 | None:intergenic | 35.0% | |
| AAAGTTATGTTGAGTGGAAG+TGG | - | chr7_2:27051783-27051802 | Msa1054730:intron | 35.0% | |
| AAGTTATGTTGAGTGGAAGT+GGG | - | chr7_2:27051784-27051803 | Msa1054730:intron | 35.0% | |
| !!! | GTTCCTGTAAGTTTTGTTGA+TGG | + | chr7_2:27052303-27052322 | None:intergenic | 35.0% |
| ACTATGAAGATTTACTCCGT+TGG | + | chr7_2:27052553-27052572 | None:intergenic | 35.0% | |
| ! | TAACGCAGAAATCTGTCTTT+TGG | - | chr7_2:27052577-27052596 | Msa1054730:intron | 35.0% |
| ! | CTACTAGGGATTTGTTCATT+TGG | - | chr7_2:27052767-27052786 | Msa1054730:intron | 35.0% |
| TTGTTCCATAATCTCAGCTT+TGG | + | chr7_2:27052937-27052956 | None:intergenic | 35.0% | |
| AGCTGAGATTATGGAACAAA+AGG | - | chr7_2:27052938-27052957 | Msa1054730:intron | 35.0% | |
| GCTGAGATTATGGAACAAAA+GGG | - | chr7_2:27052939-27052958 | Msa1054730:intron | 35.0% | |
| ATTTAGTGAGGAGAGATCTT+TGG | - | chr7_2:27053041-27053060 | Msa1054730:CDS | 35.0% | |
| TTGTTTAACCAGTTACAGTC+AGG | - | chr7_2:27053074-27053093 | Msa1054730:intron | 35.0% | |
| CAAAAACACTAGATTCCTTG+AGG | - | chr7_2:27053134-27053153 | Msa1054730:intron | 35.0% | |
| AAAACACTAGATTCCTTGAG+GGG | - | chr7_2:27053136-27053155 | Msa1054730:intron | 35.0% | |
| ! | CAGAAGGCTGATAAAGTTTT+TGG | + | chr7_2:27053209-27053228 | None:intergenic | 35.0% |
| AGGAATGAGGATTAAGAGAT+TGG | + | chr7_2:27053575-27053594 | None:intergenic | 35.0% | |
| TCTCTTAATCCTCATTCCTA+AGG | - | chr7_2:27053576-27053595 | Msa1054730:intron | 35.0% | |
| ! | TTACCAAGATAATGGCTGAT+AGG | - | chr7_2:27053665-27053684 | Msa1054730:intron | 35.0% |
| TAGTTGCTTCAGATGCTATA+AGG | + | chr7_2:27053768-27053787 | None:intergenic | 35.0% | |
| ! | AGGCTTTTGACACTTTGAAT+TGG | - | chr7_2:27053845-27053864 | Msa1054730:intron | 35.0% |
| ! | TTCATAAGGTCTTTTGTGAC+TGG | - | chr7_2:27053902-27053921 | Msa1054730:intron | 35.0% |
| AAGCTCTCTATAAGTGTCAA+TGG | - | chr7_2:27053949-27053968 | Msa1054730:intron | 35.0% | |
| TTCAGCCAGACAAAATAGAA+GGG | + | chr7_2:27054034-27054053 | None:intergenic | 35.0% | |
| GAACATCATGAATCTCTTTG+AGG | - | chr7_2:27054200-27054219 | Msa1054730:intron | 35.0% | |
| GAAACCAGTTATAGATGTGA+TGG | + | chr7_2:27054310-27054329 | None:intergenic | 35.0% | |
| AATTGAAAGGCAAACTACCA+TGG | + | chr7_2:27054335-27054354 | None:intergenic | 35.0% | |
| TCTAGGCATTCTTCTGTTTA+AGG | - | chr7_2:27054356-27054375 | Msa1054730:intron | 35.0% | |
| CTAGGCATTCTTCTGTTTAA+GGG | - | chr7_2:27054357-27054376 | Msa1054730:intron | 35.0% | |
| TAGGCATTCTTCTGTTTAAG+GGG | - | chr7_2:27054358-27054377 | Msa1054730:intron | 35.0% | |
| TTGCAGGCCATTTATAAACA+TGG | + | chr7_2:27054524-27054543 | None:intergenic | 35.0% | |
| GGTGCATGAGAAATTTCATT+TGG | - | chr7_2:27054565-27054584 | Msa1054730:intron | 35.0% | |
| ! | AATTTCATTTGGAGTGGTGT+TGG | - | chr7_2:27054576-27054595 | Msa1054730:intron | 35.0% |
| TTTGTCAACCCAAAGATTGT+GGG | - | chr7_2:27054637-27054656 | Msa1054730:intron | 35.0% | |
| ! | CTAATGTGGTTTTTCATTCC+AGG | + | chr7_2:27054822-27054841 | None:intergenic | 35.0% |
| ! | ATGGTCAGAACATTAGTTTC+TGG | - | chr7_2:27054877-27054896 | Msa1054730:intron | 35.0% |
| !! | ACATTAGTTTCTGGTCTGAT+AGG | - | chr7_2:27054886-27054905 | Msa1054730:intron | 35.0% |
| GCCTGATTATATTGTGCAAA+AGG | - | chr7_2:27055013-27055032 | Msa1054730:intron | 35.0% | |
| AACTGGATTATGTCAACTGA+TGG | - | chr7_2:27055101-27055120 | Msa1054730:intron | 35.0% | |
| ! | GCAAGAATAAGCAATTTTGC+TGG | + | chr7_2:27055135-27055154 | None:intergenic | 35.0% |
| ATTGCTTATTCTTGCTTCTC+TGG | - | chr7_2:27055140-27055159 | Msa1054730:intron | 35.0% | |
| GAATATATGAGTTCCATAGC+AGG | + | chr7_2:27055193-27055212 | None:intergenic | 35.0% | |
| ! | CATCAGTAGGTATTTTGTTG+TGG | + | chr7_2:27055250-27055269 | None:intergenic | 35.0% |
| TTCAAAGAAAATATGCTGGG+AGG | + | chr7_2:27055339-27055358 | None:intergenic | 35.0% | |
| TTCACACTATTTGGGCTATA+TGG | - | chr7_2:27055501-27055520 | Msa1054730:intron | 35.0% | |
| ! | TTTGGGCTATATGGATTGAA+AGG | - | chr7_2:27055510-27055529 | Msa1054730:intron | 35.0% |
| AGTCAAACTCAGCTATAGTT+TGG | - | chr7_2:27055598-27055617 | Msa1054730:intron | 35.0% | |
| !! | TATAGTTTGGTCTTGGCAAA+AGG | - | chr7_2:27055611-27055630 | Msa1054730:intron | 35.0% |
| GCGGTCAAAATTAACTTTGA+TGG | - | chr7_2:27055743-27055762 | Msa1054730:intron | 35.0% | |
| ! | AACTTTGATGGTTCTGCTAT+AGG | - | chr7_2:27055755-27055774 | Msa1054730:intron | 35.0% |
| CTAGTAAGTGCAACAACATT+AGG | + | chr7_2:27056091-27056110 | None:intergenic | 35.0% | |
| ! | TGTTGCACTTACTAGTGTTT+TGG | - | chr7_2:27056096-27056115 | Msa1054730:intron | 35.0% |
| !!! | TGGAGTTTTCTACTGGTTTT+TGG | - | chr7_2:27056207-27056226 | Msa1054730:intron | 35.0% |
| !!! | GGAGTTTTCTACTGGTTTTT+GGG | - | chr7_2:27056208-27056227 | Msa1054730:intron | 35.0% |
| AGTGTGCTTATTTCACAACC+TGG | - | chr7_2:27049079-27049098 | Msa1054730:CDS | 40.0% | |
| !!! | TGATGCTGTTTTGGATAAGC+AGG | - | chr7_2:27049230-27049249 | Msa1054730:CDS | 40.0% |
| TCATAAACCAAACAGGGCAA+TGG | - | chr7_2:27049498-27049517 | Msa1054730:intron | 40.0% | |
| AAACAGGGCATAGTGTTAAG+TGG | - | chr7_2:27049587-27049606 | Msa1054730:intron | 40.0% | |
| GCATAGTGTTAAGTGGTAAC+AGG | - | chr7_2:27049594-27049613 | Msa1054730:intron | 40.0% | |
| !! | TTGGCTAGCTTCTATGTGTT+TGG | - | chr7_2:27049819-27049838 | Msa1054730:intron | 40.0% |
| CTAGCTTCTATGTGTTTGGT+TGG | - | chr7_2:27049823-27049842 | Msa1054730:intron | 40.0% | |
| ! | GTACTTTGGGTTTGGAGTAT+TGG | - | chr7_2:27050104-27050123 | Msa1054730:intron | 40.0% |
| CACTGTAGAGATGAACTTTC+AGG | + | chr7_2:27050231-27050250 | None:intergenic | 40.0% | |
| TCTCTACAGTGTGTGTAGAT+AGG | - | chr7_2:27050240-27050259 | Msa1054730:intron | 40.0% | |
| !!! | GTATTAGGTTTTTGAGGCCA+CGG | - | chr7_2:27050338-27050357 | Msa1054730:intron | 40.0% |
| !!! | TATTAGGTTTTTGAGGCCAC+GGG | - | chr7_2:27050339-27050358 | Msa1054730:intron | 40.0% |
| GAGTTATAGCAGCCTCTTAA+AGG | - | chr7_2:27050364-27050383 | Msa1054730:intron | 40.0% | |
| GTAGATACAACAAAAAGGGG+AGG | + | chr7_2:27050398-27050417 | None:intergenic | 40.0% | |
| GAAAGTTCAAACCCTGTATG+AGG | - | chr7_2:27050425-27050444 | Msa1054730:intron | 40.0% | |
| TACGAAGAAATATTTGGGGG+GGG | + | chr7_2:27050509-27050528 | None:intergenic | 40.0% | |
| !! | GAAGCTTGAGCTTGTTGTAT+TGG | - | chr7_2:27050546-27050565 | Msa1054730:intron | 40.0% |
| !! | AGCTTGAGCTTGTTGTATTG+GGG | - | chr7_2:27050548-27050567 | Msa1054730:intron | 40.0% |
| ! | TCTAACCTGATGGTGTTTGA+TGG | + | chr7_2:27050970-27050989 | None:intergenic | 40.0% |
| ACACCATCAGGTTAGAAGTT+CGG | - | chr7_2:27050974-27050993 | Msa1054730:intron | 40.0% | |
| TTACCGAACTTCTAACCTGA+TGG | + | chr7_2:27050980-27050999 | None:intergenic | 40.0% | |
| ACATCCTAATAACAGGAGCA+AGG | + | chr7_2:27051019-27051038 | None:intergenic | 40.0% | |
| TGCTCCTGTTATTAGGATGT+CGG | - | chr7_2:27051019-27051038 | Msa1054730:intron | 40.0% | |
| GAGGGAATTGTAACAGATCT+AGG | + | chr7_2:27051212-27051231 | None:intergenic | 40.0% | |
| TATACAACAGACCCAGGATT+TGG | - | chr7_2:27051459-27051478 | Msa1054730:intron | 40.0% | |
| GTCATATTTGCTTAGGGACT+AGG | + | chr7_2:27051762-27051781 | None:intergenic | 40.0% | |
| AGTTATGTTGAGTGGAAGTG+GGG | - | chr7_2:27051785-27051804 | Msa1054730:intron | 40.0% | |
| AGTGGGAGTTTCTTATGCTT+AGG | - | chr7_2:27051861-27051880 | Msa1054730:intron | 40.0% | |
| ACACCACAGATTCCTCATAT+TGG | - | chr7_2:27051915-27051934 | Msa1054730:intron | 40.0% | |
| CAACCAATATGAGGAATCTG+TGG | + | chr7_2:27051921-27051940 | None:intergenic | 40.0% | |
| CACAGATTCCTCATATTGGT+TGG | - | chr7_2:27051919-27051938 | Msa1054730:intron | 40.0% | |
| GTGAAATGTCAGAGAAGAGA+TGG | - | chr7_2:27052228-27052247 | Msa1054730:intron | 40.0% | |
| AATGTAAGAGCGATTGGTGA+TGG | - | chr7_2:27052724-27052743 | Msa1054730:intron | 40.0% | |
| ! | ATGTAAGAGCGATTGGTGAT+GGG | - | chr7_2:27052725-27052744 | Msa1054730:intron | 40.0% |
| TGGGCTTTCATAGTTCAGTT+AGG | - | chr7_2:27052787-27052806 | Msa1054730:intron | 40.0% | |
| GGGCTTTCATAGTTCAGTTA+GGG | - | chr7_2:27052788-27052807 | Msa1054730:intron | 40.0% | |
| TAGTTCAGTTAGGGTCTGTT+TGG | - | chr7_2:27052797-27052816 | Msa1054730:intron | 40.0% | |
| AAGAGTCCCACAAGTTCTTA+CGG | + | chr7_2:27052848-27052867 | None:intergenic | 40.0% | |
| TAAGAACTTGTGGGACTCTT+TGG | - | chr7_2:27052848-27052867 | Msa1054730:CDS | 40.0% | |
| AAGAACTTGTGGGACTCTTT+GGG | - | chr7_2:27052849-27052868 | Msa1054730:CDS | 40.0% | |
| TGAAGCCAAAGCTGAGATTA+TGG | - | chr7_2:27052929-27052948 | Msa1054730:intron | 40.0% | |
| GAGATTATGGAACAAAAGGG+TGG | - | chr7_2:27052942-27052961 | Msa1054730:intron | 40.0% | |
| ATTATGGAACAAAAGGGTGG+TGG | - | chr7_2:27052945-27052964 | Msa1054730:intron | 40.0% | |
| TTATGGAACAAAAGGGTGGT+GGG | - | chr7_2:27052946-27052965 | Msa1054730:intron | 40.0% | |
| ! | AGCTTCAGCAAGTTGTTGTT+GGG | + | chr7_2:27052998-27053017 | None:intergenic | 40.0% |
| TCAACTGGCAATTGACCAAT+TGG | - | chr7_2:27053017-27053036 | Msa1054730:CDS | 40.0% | |
| CAACTGGCAATTGACCAATT+GGG | - | chr7_2:27053018-27053037 | Msa1054730:CDS | 40.0% | |
| TGACCAATTGGGATTTAGTG+AGG | - | chr7_2:27053029-27053048 | Msa1054730:CDS | 40.0% | |
| TCTCCTCACTAAATCCCAAT+TGG | + | chr7_2:27053035-27053054 | None:intergenic | 40.0% | |
| AAACACTAGATTCCTTGAGG+GGG | - | chr7_2:27053137-27053156 | Msa1054730:intron | 40.0% | |
| !! | TTTATCAGCCTTCTGAAGCA+TGG | - | chr7_2:27053214-27053233 | Msa1054730:intron | 40.0% |
| !! | TTATCAGCCTTCTGAAGCAT+GGG | - | chr7_2:27053215-27053234 | Msa1054730:intron | 40.0% |
| AACATGTGCTTCAATGTCAG+TGG | + | chr7_2:27053260-27053279 | None:intergenic | 40.0% | |
| ! | ATTTTCCTCATACTGGACAG+GGG | + | chr7_2:27053311-27053330 | None:intergenic | 40.0% |
| ! | CATTTTCCTCATACTGGACA+GGG | + | chr7_2:27053312-27053331 | None:intergenic | 40.0% |
| ! | TCATTTTCCTCATACTGGAC+AGG | + | chr7_2:27053313-27053332 | None:intergenic | 40.0% |
| GTGGAATGTATCTATTAGGG+AGG | + | chr7_2:27053336-27053355 | None:intergenic | 40.0% | |
| TCTGTAGCAGTTACAATCTG+TGG | + | chr7_2:27053355-27053374 | None:intergenic | 40.0% | |
| !! | AAGGCAGTCTTTGATTTGAG+TGG | - | chr7_2:27053418-27053437 | Msa1054730:intron | 40.0% |
| ! | GACACTTCTACCATCAGTTT+TGG | - | chr7_2:27053473-27053492 | Msa1054730:intron | 40.0% |
| !! | GTGCATAAAGAAGTATTGGG+TGG | + | chr7_2:27053527-27053546 | None:intergenic | 40.0% |
| CCTGAAGTTATCCAGTTTGT+TGG | + | chr7_2:27053611-27053630 | None:intergenic | 40.0% | |
| CCAACAAACTGGATAACTTC+AGG | - | chr7_2:27053608-27053627 | Msa1054730:intron | 40.0% | |
| TGAAAGTTTGCAAGGGCAAT+TGG | + | chr7_2:27053634-27053653 | None:intergenic | 40.0% | |
| ! | AAGATAATGGCTGATAGGCT+GGG | - | chr7_2:27053670-27053689 | Msa1054730:intron | 40.0% |
| TATCAAAGGGGATTCATACC+TGG | - | chr7_2:27053721-27053740 | Msa1054730:intron | 40.0% | |
| GTTCATGTGTTACAGTGCTT+TGG | - | chr7_2:27053877-27053896 | Msa1054730:intron | 40.0% | |
| !! | ACAGTGCTTTGGCTTTCATA+AGG | - | chr7_2:27053888-27053907 | Msa1054730:intron | 40.0% |
| AGTGTCAATGGAAAAGCAGT+TGG | - | chr7_2:27053961-27053980 | Msa1054730:intron | 40.0% | |
| GTGTCAATGGAAAAGCAGTT+GGG | - | chr7_2:27053962-27053981 | Msa1054730:intron | 40.0% | |
| ACAAAATAGAAGGGGTGAGA+GGG | + | chr7_2:27054025-27054044 | None:intergenic | 40.0% | |
| TCAGCCAGACAAAATAGAAG+GGG | + | chr7_2:27054033-27054052 | None:intergenic | 40.0% | |
| CTTCAGCCAGACAAAATAGA+AGG | + | chr7_2:27054035-27054054 | None:intergenic | 40.0% | |
| TCTTGAAGCTATGGTGATAG+AGG | - | chr7_2:27054071-27054090 | Msa1054730:intron | 40.0% | |
| CTTGAAGCTATGGTGATAGA+GGG | - | chr7_2:27054072-27054091 | Msa1054730:intron | 40.0% | |
| AGGGACAATTGTCTCAGATA+AGG | - | chr7_2:27054091-27054110 | Msa1054730:intron | 40.0% | |
| GGGACAATTGTCTCAGATAA+GGG | - | chr7_2:27054092-27054111 | Msa1054730:intron | 40.0% | |
| AGCAGTGACTAGGAATGTAA+AGG | + | chr7_2:27054128-27054147 | None:intergenic | 40.0% | |
| ! | GACATCCTCATTTTCTGCAA+AGG | - | chr7_2:27054159-27054178 | Msa1054730:intron | 40.0% |
| !! | ATGAATCTCTTTGAGGCCTA+TGG | - | chr7_2:27054207-27054226 | Msa1054730:intron | 40.0% |
| AGATGTGATGGCATGAATTC+TGG | + | chr7_2:27054298-27054317 | None:intergenic | 40.0% | |
| CATGCCATCACATCTATAAC+TGG | - | chr7_2:27054303-27054322 | Msa1054730:intron | 40.0% | |
| ! | TCTATAACTGGTTTCAGCCA+TGG | - | chr7_2:27054315-27054334 | Msa1054730:intron | 40.0% |
| ! | GGTCTAAGATGCAAAGCTTT+GGG | + | chr7_2:27054387-27054406 | None:intergenic | 40.0% |
| ! | AGGTCTAAGATGCAAAGCTT+TGG | + | chr7_2:27054388-27054407 | None:intergenic | 40.0% |
| TTTGCATCTTAGACCTGTTG+TGG | - | chr7_2:27054392-27054411 | Msa1054730:intron | 40.0% | |
| ACTTGAATTCTGTCCACAAC+AGG | + | chr7_2:27054408-27054427 | None:intergenic | 40.0% | |
| TTCAAGTGAAACTCAATGCC+TGG | - | chr7_2:27054421-27054440 | Msa1054730:intron | 40.0% | |
| AGGAAGACTGCTCACAATAA+TGG | - | chr7_2:27054446-27054465 | Msa1054730:intron | 40.0% | |
| GGAAGACTGCTCACAATAAT+GGG | - | chr7_2:27054447-27054466 | Msa1054730:intron | 40.0% | |
| GTTTGTCAACCCAAAGATTG+TGG | - | chr7_2:27054636-27054655 | Msa1054730:intron | 40.0% | |
| TTGTCAACCCAAAGATTGTG+GGG | - | chr7_2:27054638-27054657 | Msa1054730:intron | 40.0% | |
| !! | CAGCTTTGTTAACAGTAGCA+GGG | + | chr7_2:27054680-27054699 | None:intergenic | 40.0% |
| !! | ACAGCTTTGTTAACAGTAGC+AGG | + | chr7_2:27054681-27054700 | None:intergenic | 40.0% |
| TCATTACTTCAGAGGAGCAA+TGG | - | chr7_2:27054724-27054743 | Msa1054730:intron | 40.0% | |
| CATTACTTCAGAGGAGCAAT+GGG | - | chr7_2:27054725-27054744 | Msa1054730:intron | 40.0% | |
| ! | GAACATGCTACTTGGTCTAT+TGG | - | chr7_2:27054852-27054871 | Msa1054730:intron | 40.0% |
| GCTACTTGGTCTATTGGAAA+TGG | - | chr7_2:27054858-27054877 | Msa1054730:intron | 40.0% | |
| !! | TTAGTTTCTGGTCTGATAGG+TGG | - | chr7_2:27054889-27054908 | Msa1054730:intron | 40.0% |
| ACACCTCTATAGCTGATCAA+TGG | - | chr7_2:27054916-27054935 | Msa1054730:intron | 40.0% | |
| ACTCCATTGATCAGCTATAG+AGG | + | chr7_2:27054922-27054941 | None:intergenic | 40.0% | |
| !! | GCAACTTTTAACTCTATGGC+AGG | + | chr7_2:27054963-27054982 | None:intergenic | 40.0% |
| ! | GTTGCTGATTGCTTGAACAA+TGG | - | chr7_2:27054978-27054997 | Msa1054730:intron | 40.0% |
| ATTGCTTGAACAATGGAACC+TGG | - | chr7_2:27054985-27055004 | Msa1054730:intron | 40.0% | |
| AATATAATCAGGCAGACACC+AGG | + | chr7_2:27055006-27055025 | None:intergenic | 40.0% | |
| TGTGCAAAAGGATCCTGATT+TGG | - | chr7_2:27055025-27055044 | Msa1054730:intron | 40.0% | |
| TGAATTCTAGCAGCCAAATC+AGG | + | chr7_2:27055041-27055060 | None:intergenic | 40.0% | |
| ATAATCCAGTTGAGCTGATC+AGG | + | chr7_2:27055092-27055111 | None:intergenic | 40.0% | |
| ACTCATATATTCCACCCTCT+AGG | - | chr7_2:27055201-27055220 | Msa1054730:intron | 40.0% | |
| CTCATATATTCCACCCTCTA+GGG | - | chr7_2:27055202-27055221 | Msa1054730:intron | 40.0% | |
| GATAAGCCTCCAGGTAATAA+AGG | + | chr7_2:27055228-27055247 | None:intergenic | 40.0% | |
| !! | AGACTGTATTAGCCTGCTTT+TGG | - | chr7_2:27055424-27055443 | Msa1054730:intron | 40.0% |
| !! | GACTGTATTAGCCTGCTTTT+GGG | - | chr7_2:27055425-27055444 | Msa1054730:intron | 40.0% |
| ! | GGAATTAAACATGGTGGTGA+GGG | + | chr7_2:27055567-27055586 | None:intergenic | 40.0% |
| ! | TGGAATTAAACATGGTGGTG+AGG | + | chr7_2:27055568-27055587 | None:intergenic | 40.0% |
| ACTCAGCTATAGTTTGGTCT+TGG | - | chr7_2:27055604-27055623 | Msa1054730:intron | 40.0% | |
| CTCTAACATGCTTGACTACA+AGG | - | chr7_2:27055637-27055656 | Msa1054730:intron | 40.0% | |
| GTGACTCTCTTAGTGTGAAT+AGG | + | chr7_2:27055683-27055702 | None:intergenic | 40.0% | |
| TAAGAGAGTCACTATCAGAC+AGG | - | chr7_2:27055691-27055710 | Msa1054730:intron | 40.0% | |
| CTATCAGACAGGAAGTCAAA+TGG | - | chr7_2:27055702-27055721 | Msa1054730:intron | 40.0% | |
| !! | GTTAATTTTGACCGCAGTAG+AGG | + | chr7_2:27055738-27055757 | None:intergenic | 40.0% |
| CAATTCCAACAGAACCACAA+GGG | + | chr7_2:27055787-27055806 | None:intergenic | 40.0% | |
| ACAATTCCAACAGAACCACA+AGG | + | chr7_2:27055788-27055807 | None:intergenic | 40.0% | |
| TAAGAATGGGAGATATCGTG+AGG | - | chr7_2:27056039-27056058 | Msa1054730:intron | 40.0% | |
| ! | GGCGTTTAAAGTTATGAGCT+TGG | - | chr7_2:27056060-27056079 | Msa1054730:intron | 40.0% |
| !!! | TGTTTTGGTTTGTTGCTCTG+AGG | - | chr7_2:27056111-27056130 | Msa1054730:intron | 40.0% |
| ! | TGTTCTGGTAGAAGGTTTTG+TGG | - | chr7_2:27056174-27056193 | Msa1054730:intron | 40.0% |
| !! | GCTTCTGAAACTCAAAGCAG+TGG | - | chr7_2:27049013-27049032 | Msa1054730:CDS | 45.0% |
| CTTAACACCATTGCCCTGTT+TGG | + | chr7_2:27049508-27049527 | None:intergenic | 45.0% | |
| TAACAGGGCATAGTGTGAAG+TGG | - | chr7_2:27049610-27049629 | Msa1054730:intron | 45.0% | |
| !! | GTGTGGTGTTGACATTTCTC+TGG | - | chr7_2:27049970-27049989 | Msa1054730:intron | 45.0% |
| CATTGTGAGACAAGCATAGC+AGG | + | chr7_2:27050200-27050219 | None:intergenic | 45.0% | |
| GAGGTTTGTACGCCTTTAAG+AGG | + | chr7_2:27050379-27050398 | None:intergenic | 45.0% | |
| ACGAAGAAATATTTGGGGGG+GGG | + | chr7_2:27050508-27050527 | None:intergenic | 45.0% | |
| TCTGAACCTGTGAGTTTCAG+TGG | - | chr7_2:27050741-27050760 | Msa1054730:intron | 45.0% | |
| GCTCCTGTTATTAGGATGTC+GGG | - | chr7_2:27051020-27051039 | Msa1054730:intron | 45.0% | |
| TGTCCCGACATCCTAATAAC+AGG | + | chr7_2:27051026-27051045 | None:intergenic | 45.0% | |
| CTGTTGCTATCACTGCAACA+TGG | + | chr7_2:27051066-27051085 | None:intergenic | 45.0% | |
| TAAACTGGGAGGGAACTTGA+GGG | + | chr7_2:27051230-27051249 | None:intergenic | 45.0% | |
| !! | GGAGGTTGTTGGTGATAGTT+AGG | + | chr7_2:27051291-27051310 | None:intergenic | 45.0% |
| ACCAACAACCTCCCAACTAT+GGG | - | chr7_2:27051298-27051317 | Msa1054730:intron | 45.0% | |
| ! | AACCTCCCAACTATGGGTTA+TGG | - | chr7_2:27051304-27051323 | Msa1054730:intron | 45.0% |
| ! | ACCTCCCAACTATGGGTTAT+GGG | - | chr7_2:27051305-27051324 | Msa1054730:intron | 45.0% |
| TATGGGAGCGACTAACACTT+CGG | - | chr7_2:27051322-27051341 | Msa1054730:intron | 45.0% | |
| ! | AGAGCACCACTAATGGAAAC+GGG | + | chr7_2:27051349-27051368 | None:intergenic | 45.0% |
| ! | CAGAGCACCACTAATGGAAA+CGG | + | chr7_2:27051350-27051369 | None:intergenic | 45.0% |
| ! | AATAGGCAGAGCACCACTAA+TGG | + | chr7_2:27051356-27051375 | None:intergenic | 45.0% |
| TAGAGAGAACTTACTGGGCA+AGG | + | chr7_2:27051557-27051576 | None:intergenic | 45.0% | |
| TGTTTGAGGGCTTTCGAAGA+TGG | - | chr7_2:27051967-27051986 | Msa1054730:intron | 45.0% | |
| GCGCCATCAACAAAACTTAC+AGG | - | chr7_2:27052297-27052316 | Msa1054730:intron | 45.0% | |
| GCACATGCGCAACTTTAACT+TGG | - | chr7_2:27052448-27052467 | Msa1054730:intron | 45.0% | |
| TCAATCTGCCATCCTTGAGA+AGG | - | chr7_2:27052475-27052494 | Msa1054730:intron | 45.0% | |
| AGTGTTCACCTTCTCAAGGA+TGG | + | chr7_2:27052486-27052505 | None:intergenic | 45.0% | |
| GACTAGTGTTCACCTTCTCA+AGG | + | chr7_2:27052490-27052509 | None:intergenic | 45.0% | |
| TCTAGTGCCGTAAGAACTTG+TGG | - | chr7_2:27052838-27052857 | Msa1054730:CDS | 45.0% | |
| CTAGTGCCGTAAGAACTTGT+GGG | - | chr7_2:27052839-27052858 | Msa1054730:CDS | 45.0% | |
| TATGGAACAAAAGGGTGGTG+GGG | - | chr7_2:27052947-27052966 | Msa1054730:intron | 45.0% | |
| GAGCTTCAGCAAGTTGTTGT+TGG | + | chr7_2:27052999-27053018 | None:intergenic | 45.0% | |
| !! | ACAACTTGCTGAAGCTCAAC+TGG | - | chr7_2:27053002-27053021 | Msa1054730:CDS | 45.0% |
| TAGTGAGGAGAGATCTTTGG+AGG | - | chr7_2:27053044-27053063 | Msa1054730:CDS | 45.0% | |
| !! | TATCAGCCTTCTGAAGCATG+GGG | - | chr7_2:27053216-27053235 | Msa1054730:intron | 45.0% |
| TGCTTCAATGTCAGTGGTAC+TGG | + | chr7_2:27053254-27053273 | None:intergenic | 45.0% | |
| !! | GGAGGTCATTTTCCTCATAC+TGG | + | chr7_2:27053318-27053337 | None:intergenic | 45.0% |
| AAGTGTCCTGGATAACCATC+AGG | + | chr7_2:27053460-27053479 | None:intergenic | 45.0% | |
| !! | AACTGATGGTAGAAGTGTCC+TGG | + | chr7_2:27053472-27053491 | None:intergenic | 45.0% |
| !! | TTATCCAGTTTGTTGGCACC+AGG | + | chr7_2:27053604-27053623 | None:intergenic | 45.0% |
| CAGCCTATCAGCCATTATCT+TGG | + | chr7_2:27053671-27053690 | None:intergenic | 45.0% | |
| ! | CAAGATAATGGCTGATAGGC+TGG | - | chr7_2:27053669-27053688 | Msa1054730:intron | 45.0% |
| AAAATAGAAGGGGTGAGAGG+GGG | + | chr7_2:27054023-27054042 | None:intergenic | 45.0% | |
| CAAAATAGAAGGGGTGAGAG+GGG | + | chr7_2:27054024-27054043 | None:intergenic | 45.0% | |
| GACAAAATAGAAGGGGTGAG+AGG | + | chr7_2:27054026-27054045 | None:intergenic | 45.0% | |
| ! | CTCACCCCTTCTATTTTGTC+TGG | - | chr7_2:27054026-27054045 | Msa1054730:intron | 45.0% |
| TCTGCATACAAGCAGTGACT+AGG | + | chr7_2:27054138-27054157 | None:intergenic | 45.0% | |
| GAGTGCCTTTGCAGAAAATG+AGG | + | chr7_2:27054167-27054186 | None:intergenic | 45.0% | |
| ! | AAGGCACTCTTGCCAACATA+AGG | - | chr7_2:27054178-27054197 | Msa1054730:intron | 45.0% |
| GTGAAACTCAATGCCTGGAA+AGG | - | chr7_2:27054426-27054445 | Msa1054730:intron | 45.0% | |
| !! | ACTGCTCACAATAATGGGCA+GGG | - | chr7_2:27054452-27054471 | Msa1054730:intron | 45.0% |
| !! | AATAATGGGCAGGGTTCAGT+TGG | - | chr7_2:27054461-27054480 | Msa1054730:intron | 45.0% |
| ! | ATGCACTGTTGCTTGGTTGA+AGG | - | chr7_2:27054614-27054633 | Msa1054730:intron | 45.0% |
| TGTCAACCCAAAGATTGTGG+GGG | - | chr7_2:27054639-27054658 | Msa1054730:intron | 45.0% | |
| GTGGAAGCTCATTACTTCAG+AGG | - | chr7_2:27054716-27054735 | Msa1054730:intron | 45.0% | |
| ! | GGGCTTTAATCTGCAGAGAT+AGG | - | chr7_2:27054745-27054764 | Msa1054730:intron | 45.0% |
| ATAACTTCATCTGTGTGGCC+TGG | - | chr7_2:27054801-27054820 | Msa1054730:intron | 45.0% | |
| ! | TTTCTGGTCTGATAGGTGGA+TGG | - | chr7_2:27054893-27054912 | Msa1054730:intron | 45.0% |
| TGGCAGGAAGAAAGTCAGAA+GGG | + | chr7_2:27054947-27054966 | None:intergenic | 45.0% | |
| ATGGCAGGAAGAAAGTCAGA+AGG | + | chr7_2:27054948-27054967 | None:intergenic | 45.0% | |
| AGATTCCTGATCAGCTCAAC+TGG | - | chr7_2:27055084-27055103 | Msa1054730:intron | 45.0% | |
| CAGGTAATAAAGGCCCTAGA+GGG | + | chr7_2:27055218-27055237 | None:intergenic | 45.0% | |
| ! | TTTGTTGTGGATAAGCCTCC+AGG | + | chr7_2:27055237-27055256 | None:intergenic | 45.0% |
| TACCAGTAACTCCCAAAAGC+AGG | + | chr7_2:27055439-27055458 | None:intergenic | 45.0% | |
| !! | CTTTTGGGAGTTACTGGTAG+AGG | - | chr7_2:27055440-27055459 | Msa1054730:intron | 45.0% |
| TACTGGTAGAGGCAGCAAAA+TGG | - | chr7_2:27055451-27055470 | Msa1054730:intron | 45.0% | |
| ! | AAACATGGTGGTGAGGGTAT+TGG | + | chr7_2:27055561-27055580 | None:intergenic | 45.0% |
| TGCTTGACTACAAGGTCTCA+AGG | - | chr7_2:27055645-27055664 | Msa1054730:intron | 45.0% | |
| !! | ATTTTGACCGCAGTAGAGGA+AGG | + | chr7_2:27055734-27055753 | None:intergenic | 45.0% |
| !! | AGGAGTCGGATTTGTTGACT+GGG | - | chr7_2:27056131-27056150 | Msa1054730:intron | 45.0% |
| ! | AGTGCATAGTGTTGCTGTTC+TGG | - | chr7_2:27056159-27056178 | Msa1054730:intron | 45.0% |
| ! | AGTGTTGCTGTTCTGGTAGA+AGG | - | chr7_2:27056166-27056185 | Msa1054730:intron | 45.0% |
| GTAGAAAACTCCACTACAGC+AGG | + | chr7_2:27056200-27056219 | None:intergenic | 45.0% | |
| !! | GCTGTAGTGGAGTTTTCTAC+TGG | - | chr7_2:27056200-27056219 | Msa1054730:intron | 45.0% |
| !!! | TCTACTGGTTTTTGGGCTTC+TGG | - | chr7_2:27056215-27056234 | Msa1054730:CDS | 45.0% |
| !! | CTCTGGAACTACTGATGAGC+AGG | - | chr7_2:27049987-27050006 | Msa1054730:intron | 50.0% |
| TGCTGTGACCACTGCAATAC+AGG | - | chr7_2:27050017-27050036 | Msa1054730:intron | 50.0% | |
| AAGAAATATTTGGGGGGGGG+GGG | + | chr7_2:27050505-27050524 | None:intergenic | 50.0% | |
| GAAGAAATATTTGGGGGGGG+GGG | + | chr7_2:27050506-27050525 | None:intergenic | 50.0% | |
| CGAAGAAATATTTGGGGGGG+GGG | + | chr7_2:27050507-27050526 | None:intergenic | 50.0% | |
| TGTATTGAGATGAGCTGCGC+TGG | - | chr7_2:27050793-27050812 | Msa1054730:intron | 50.0% | |
| GTAAACTGGGAGGGAACTTG+AGG | + | chr7_2:27051231-27051250 | None:intergenic | 50.0% | |
| CACCAACAACCTCCCAACTA+TGG | - | chr7_2:27051297-27051316 | Msa1054730:intron | 50.0% | |
| ACCCATAGTTGGGAGGTTGT+TGG | + | chr7_2:27051302-27051321 | None:intergenic | 50.0% | |
| TCCCATAACCCATAGTTGGG+AGG | + | chr7_2:27051309-27051328 | None:intergenic | 50.0% | |
| CGCTCCCATAACCCATAGTT+GGG | + | chr7_2:27051312-27051331 | None:intergenic | 50.0% | |
| TCGCTCCCATAACCCATAGT+TGG | + | chr7_2:27051313-27051332 | None:intergenic | 50.0% | |
| GAGCACCACTAATGGAAACG+GGG | + | chr7_2:27051348-27051367 | None:intergenic | 50.0% | |
| ! | ATGGAACAAAAGGGTGGTGG+GGG | - | chr7_2:27052948-27052967 | Msa1054730:intron | 50.0% |
| ! | TGGTGGGGGATTTTCATCAG+AGG | - | chr7_2:27052962-27052981 | Msa1054730:intron | 50.0% |
| ! | GGTGGGGGATTTTCATCAGA+GGG | - | chr7_2:27052963-27052982 | Msa1054730:intron | 50.0% |
| !! | TTTTCATCAGAGGGTGCACC+TGG | - | chr7_2:27052972-27052991 | Msa1054730:intron | 50.0% |
| ! | CAGTGTTTCTATCCCCCTCA+AGG | + | chr7_2:27053152-27053171 | None:intergenic | 50.0% |
| TTTCCTCCCCATGCTTCAGA+AGG | + | chr7_2:27053225-27053244 | None:intergenic | 50.0% | |
| GACAGGGGCAGCAAAAATGT+TGG | + | chr7_2:27053296-27053315 | None:intergenic | 50.0% | |
| ! | ATCCTCATTCCTAAGGTGCC+TGG | - | chr7_2:27053583-27053602 | Msa1054730:intron | 50.0% |
| ! | CAGTCTTGTATGTGTCTGCC+AGG | + | chr7_2:27053742-27053761 | None:intergenic | 50.0% |
| GCTGAAGAAGTCATCAGCAG+AGG | - | chr7_2:27054048-27054067 | Msa1054730:intron | 50.0% | |
| CAGCAGAGGTCTTGAAGCTA+TGG | - | chr7_2:27054062-27054081 | Msa1054730:intron | 50.0% | |
| TTGGCCAGAGTAACTGCCAT+AGG | + | chr7_2:27054226-27054245 | None:intergenic | 50.0% | |
| TGTGAGCAGTCTTCCTTTCC+AGG | + | chr7_2:27054442-27054461 | None:intergenic | 50.0% | |
| !! | GACTGCTCACAATAATGGGC+AGG | - | chr7_2:27054451-27054470 | Msa1054730:intron | 50.0% |
| GTCAACCCAAAGATTGTGGG+GGG | - | chr7_2:27054640-27054659 | Msa1054730:intron | 50.0% | |
| CTGTTCTTCTTCTGCTCACG+TGG | - | chr7_2:27054697-27054716 | Msa1054730:intron | 50.0% | |
| TGATCAGGAATCTCCTCAGC+TGG | + | chr7_2:27055077-27055096 | None:intergenic | 50.0% | |
| CCATCACCAGAGAGTTCCTT+GGG | - | chr7_2:27055163-27055182 | Msa1054730:intron | 50.0% | |
| GTAATAAAGGCCCTAGAGGG+TGG | + | chr7_2:27055215-27055234 | None:intergenic | 50.0% | |
| CCAGGTAATAAAGGCCCTAG+AGG | + | chr7_2:27055219-27055238 | None:intergenic | 50.0% | |
| !! | CCTCTAGGGCCTTTATTACC+TGG | - | chr7_2:27055216-27055235 | Msa1054730:intron | 50.0% |
| CTAGGGCCTTTATTACCTGG+AGG | - | chr7_2:27055219-27055238 | Msa1054730:intron | 50.0% | |
| TAGGGTCACCACCAGATTGT+GGG | - | chr7_2:27055361-27055380 | Msa1054730:intron | 50.0% | |
| TCACCACCAGATTGTGGGAA+TGG | - | chr7_2:27055366-27055385 | Msa1054730:intron | 50.0% | |
| AAGCCATTCCCACAATCTGG+TGG | + | chr7_2:27055372-27055391 | None:intergenic | 50.0% | |
| ACCAGATTGTGGGAATGGCT+TGG | - | chr7_2:27055371-27055390 | Msa1054730:intron | 50.0% | |
| ! | TTGTGGGAATGGCTTGGCAA+AGG | - | chr7_2:27055377-27055396 | Msa1054730:intron | 50.0% |
| !! | AGCCTGCTTTTGGGAGTTAC+TGG | - | chr7_2:27055434-27055453 | Msa1054730:intron | 50.0% |
| AGGCAGCAAAATGGTGCAAC+AGG | - | chr7_2:27055460-27055479 | Msa1054730:intron | 50.0% | |
| GCTATAGGAACTCACCCTTG+TGG | - | chr7_2:27055770-27055789 | Msa1054730:intron | 50.0% | |
| ! | ACTCACCCTTGTGGTTCTGT+TGG | - | chr7_2:27055779-27055798 | Msa1054730:intron | 50.0% |
| !! | GGTTTGTTGCTCTGAGGAGT+CGG | - | chr7_2:27056117-27056136 | Msa1054730:intron | 50.0% |
| !! | GAGGAGTCGGATTTGTTGAC+TGG | - | chr7_2:27056130-27056149 | Msa1054730:intron | 50.0% |
| GTATCAGCAGCTGTTCTGCT+TGG | - | chr7_2:27056244-27056263 | Msa1054730:CDS | 50.0% | |
| !! | AGGGTGGGGTTTTTGTTGTC+TGG | - | chr7_2:27056278-27056297 | Msa1054730:CDS | 50.0% |
| !! | GGGTGGGGTTTTTGTTGTCT+GGG | - | chr7_2:27056279-27056298 | Msa1054730:CDS | 50.0% |
| ! | TGCTGTTTGGACCTCACAGT+TGG | - | chr7_2:27056310-27056329 | Msa1054730:five_prime_UTR | 50.0% |
| GCTGTTTGGACCTCACAGTT+GGG | - | chr7_2:27056311-27056330 | Msa1054730:five_prime_UTR | 50.0% | |
| CTGTTTGGACCTCACAGTTG+GGG | - | chr7_2:27056312-27056331 | Msa1054730:five_prime_UTR | 50.0% | |
| TGTTTGGACCTCACAGTTGG+GGG | - | chr7_2:27056313-27056332 | Msa1054730:five_prime_UTR | 50.0% | |
| AACCAAAACCCCCAACTGTG+AGG | + | chr7_2:27056324-27056343 | None:intergenic | 50.0% | |
| !!! | AGTTGGGGGTTTTGGTTTGC+TGG | - | chr7_2:27056327-27056346 | Msa1054730:five_prime_UTR | 50.0% |
| AGAAATATTTGGGGGGGGGG+GGG | + | chr7_2:27050504-27050523 | None:intergenic | 55.0% | |
| !!! | AGCTGCGCTGGCTTGAGTTT+TGG | - | chr7_2:27050805-27050824 | Msa1054730:intron | 55.0% |
| TTCGGCCCCGTTTCCATTAG+TGG | - | chr7_2:27051340-27051359 | Msa1054730:intron | 55.0% | |
| TCCAAGCTCTGCTTCATCGC+AGG | + | chr7_2:27052254-27052273 | None:intergenic | 55.0% | |
| ! | CAGCAAGTTGTTGTTGGGCC+AGG | + | chr7_2:27052993-27053012 | None:intergenic | 55.0% |
| AGTCAGGGCCTGACTGTAAC+TGG | + | chr7_2:27053085-27053104 | None:intergenic | 55.0% | |
| ! | TTGAGTGGTGATGCTGCTCC+TGG | - | chr7_2:27053433-27053452 | Msa1054730:intron | 55.0% |
| CCTGGATAACCATCAGGACC+AGG | + | chr7_2:27053454-27053473 | None:intergenic | 55.0% | |
| CCTGGTCCTGATGGTTATCC+AGG | - | chr7_2:27053451-27053470 | Msa1054730:intron | 55.0% | |
| CACCAGGCACCTTAGGAATG+AGG | + | chr7_2:27053588-27053607 | None:intergenic | 55.0% | |
| TTGTTGGCACCAGGCACCTT+AGG | + | chr7_2:27053595-27053614 | None:intergenic | 55.0% | |
| GAGGCCTATGGCAGTTACTC+TGG | - | chr7_2:27054219-27054238 | Msa1054730:intron | 55.0% | |
| GCTAGCCCCCCACAATCTTT+GGG | + | chr7_2:27054648-27054667 | None:intergenic | 55.0% | |
| AGCTAGCCCCCCACAATCTT+TGG | + | chr7_2:27054649-27054668 | None:intergenic | 55.0% | |
| AGGAATCTCCTCAGCTGGCA+GGG | + | chr7_2:27055072-27055091 | None:intergenic | 55.0% | |
| GCCATCACCAGAGAGTTCCT+TGG | - | chr7_2:27055162-27055181 | Msa1054730:intron | 55.0% | |
| CCCAAGGAACTCTCTGGTGA+TGG | + | chr7_2:27055166-27055185 | None:intergenic | 55.0% | |
| TTCCTTGGGCTGACCTGCTA+TGG | - | chr7_2:27055177-27055196 | Msa1054730:intron | 55.0% | |
| TTCCATAGCAGGTCAGCCCA+AGG | + | chr7_2:27055182-27055201 | None:intergenic | 55.0% | |
| GTAGGGTCACCACCAGATTG+TGG | - | chr7_2:27055360-27055379 | Msa1054730:intron | 55.0% | |
| GCCAAGCCATTCCCACAATC+TGG | + | chr7_2:27055375-27055394 | None:intergenic | 55.0% | |
| TGACCGCAGTAGAGGAAGGT+GGG | + | chr7_2:27055730-27055749 | None:intergenic | 55.0% | |
| TTGACCGCAGTAGAGGAAGG+TGG | + | chr7_2:27055731-27055750 | None:intergenic | 55.0% | |
| !! | GGTTTTGTGGCCTGCTGTAG+TGG | - | chr7_2:27056187-27056206 | Msa1054730:intron | 55.0% |
| CAACAAAAACCCCACCCTGC+AGG | + | chr7_2:27056276-27056295 | None:intergenic | 55.0% | |
| CTGTGAGGTCCAAACAGCAG+AGG | + | chr7_2:27056309-27056328 | None:intergenic | 55.0% | |
| ! | GACCTCACAGTTGGGGGTTT+TGG | - | chr7_2:27056319-27056338 | Msa1054730:five_prime_UTR | 55.0% |
| GGCTGCTATAACTCAGCCCG+TGG | + | chr7_2:27050358-27050377 | None:intergenic | 60.0% | |
| AAATATTTGGGGGGGGGGGG+GGG | + | chr7_2:27050502-27050521 | None:intergenic | 60.0% | |
| GAAATATTTGGGGGGGGGGG+GGG | + | chr7_2:27050503-27050522 | None:intergenic | 60.0% | |
| GCCTGCGATGAAGCAGAGCT+TGG | - | chr7_2:27052250-27052269 | Msa1054730:intron | 60.0% | |
| !! | CAGCCTTCTGAAGCATGGGG+AGG | - | chr7_2:27053219-27053238 | Msa1054730:intron | 60.0% |
| TGCTGCCCCTGTCCAGTATG+AGG | - | chr7_2:27053303-27053322 | Msa1054730:intron | 60.0% | |
| GATGCTGCTCCTGGTCCTGA+TGG | - | chr7_2:27053442-27053461 | Msa1054730:intron | 60.0% | |
| ! | GGTGCCTGGTGCCAACAAAC+TGG | - | chr7_2:27053597-27053616 | Msa1054730:intron | 60.0% |
| GGGTTCTTCAGCTGCACCAG+AGG | - | chr7_2:27053982-27054001 | Msa1054730:intron | 60.0% | |
| ! | TCAGCTGCACCAGAGGTGTG+AGG | - | chr7_2:27053989-27054008 | Msa1054730:intron | 60.0% |
| ! | TGCACCAGAGGTGTGAGGCA+GGG | - | chr7_2:27053994-27054013 | Msa1054730:intron | 60.0% |
| !! | ATTGTGGGGGGCTAGCTGTG+AGG | - | chr7_2:27054652-27054671 | Msa1054730:intron | 60.0% |
| !! | TTGTGGGGGGCTAGCTGTGA+GGG | - | chr7_2:27054653-27054672 | Msa1054730:intron | 60.0% |
| AAGACTCACCCTGCCAGCTG+AGG | - | chr7_2:27055061-27055080 | Msa1054730:intron | 60.0% | |
| CAGGAATCTCCTCAGCTGGC+AGG | + | chr7_2:27055073-27055092 | None:intergenic | 60.0% | |
| GGTCAGCCCAAGGAACTCTC+TGG | + | chr7_2:27055172-27055191 | None:intergenic | 60.0% | |
| GTGCCCACCTTCCTCTACTG+CGG | - | chr7_2:27055724-27055743 | Msa1054730:intron | 60.0% | |
| TCTGCTTGGTTGCTGCCTGC+AGG | - | chr7_2:27056258-27056277 | Msa1054730:CDS | 60.0% | |
| CTGCTTGGTTGCTGCCTGCA+GGG | - | chr7_2:27056259-27056278 | Msa1054730:CDS | 60.0% | |
| TTGGTTGCTGCCTGCAGGGT+GGG | - | chr7_2:27056263-27056282 | Msa1054730:CDS | 60.0% | |
| CTGGGTGTGCCTCTGCTGTT+TGG | - | chr7_2:27056297-27056316 | Msa1054730:exon | 60.0% | |
| AATATTTGGGGGGGGGGGGG+GGG | + | chr7_2:27050501-27050520 | None:intergenic | 65.0% | |
| ! | CTGCACCAGAGGTGTGAGGC+AGG | - | chr7_2:27053993-27054012 | Msa1054730:intron | 65.0% |
| ! | GCACCAGAGGTGTGAGGCAG+GGG | - | chr7_2:27053995-27054014 | Msa1054730:intron | 65.0% |
| ! | CACCAGAGGTGTGAGGCAGG+GGG | - | chr7_2:27053996-27054015 | Msa1054730:intron | 65.0% |
| CTTGGTTGCTGCCTGCAGGG+TGG | - | chr7_2:27056262-27056281 | Msa1054730:CDS | 65.0% | |
| TGGTTGCTGCCTGCAGGGTG+GGG | - | chr7_2:27056264-27056283 | Msa1054730:CDS | 65.0% | |
| ATATTTGGGGGGGGGGGGGG+GGG | + | chr7_2:27050500-27050519 | None:intergenic | 70.0% | |
| GTCCCCCTGCCTCACACCTC+TGG | + | chr7_2:27054001-27054020 | None:intergenic | 70.0% | |
| TATTTGGGGGGGGGGGGGGG+GGG | + | chr7_2:27050499-27050518 | None:intergenic | 75.0% | |
| ! | ATTTGGGGGGGGGGGGGGGG+GGG | + | chr7_2:27050498-27050517 | None:intergenic | 80.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | + | chr7_2:27050497-27050516 | None:intergenic | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr7_2:27050496-27050515 | None:intergenic | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_2:27050495-27050514 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 27048940 | 27056372 | 27048940 | ID=Msa1054730;Name=Msa1054730 |
| chr7_2 | mRNA | 27048940 | 27056372 | 27048940 | ID=Msa1054730-mRNA-1;Parent=Msa1054730;Name=Msa1054730-mRNA-1;_AED=0.59;_eAED=0.59;_QI=70|0.83|0.71|0.85|1|1|7|0|254 |
| chr7_2 | exon | 27048940 | 27049269 | 27048940 | ID=Msa1054730-mRNA-1:exon:5760;Parent=Msa1054730-mRNA-1 |
| chr7_2 | exon | 27052816 | 27052881 | 27052816 | ID=Msa1054730-mRNA-1:exon:5759;Parent=Msa1054730-mRNA-1 |
| chr7_2 | exon | 27052988 | 27053072 | 27052988 | ID=Msa1054730-mRNA-1:exon:5758;Parent=Msa1054730-mRNA-1 |
| chr7_2 | exon | 27053750 | 27053843 | 27053750 | ID=Msa1054730-mRNA-1:exon:5757;Parent=Msa1054730-mRNA-1 |
| chr7_2 | exon | 27055246 | 27055303 | 27055246 | ID=Msa1054730-mRNA-1:exon:5756;Parent=Msa1054730-mRNA-1 |
| chr7_2 | exon | 27056061 | 27056101 | 27056061 | ID=Msa1054730-mRNA-1:exon:5755;Parent=Msa1054730-mRNA-1 |
| chr7_2 | exon | 27056212 | 27056372 | 27056212 | ID=Msa1054730-mRNA-1:exon:5754;Parent=Msa1054730-mRNA-1 |
| chr7_2 | five_prime_UTR | 27056303 | 27056372 | 27056303 | ID=Msa1054730-mRNA-1:five_prime_utr;Parent=Msa1054730-mRNA-1 |
| chr7_2 | CDS | 27056212 | 27056302 | 27056212 | ID=Msa1054730-mRNA-1:cds;Parent=Msa1054730-mRNA-1 |
| chr7_2 | CDS | 27056061 | 27056101 | 27056061 | ID=Msa1054730-mRNA-1:cds;Parent=Msa1054730-mRNA-1 |
| chr7_2 | CDS | 27055246 | 27055303 | 27055246 | ID=Msa1054730-mRNA-1:cds;Parent=Msa1054730-mRNA-1 |
| chr7_2 | CDS | 27053750 | 27053843 | 27053750 | ID=Msa1054730-mRNA-1:cds;Parent=Msa1054730-mRNA-1 |
| chr7_2 | CDS | 27052988 | 27053072 | 27052988 | ID=Msa1054730-mRNA-1:cds;Parent=Msa1054730-mRNA-1 |
| chr7_2 | CDS | 27052816 | 27052881 | 27052816 | ID=Msa1054730-mRNA-1:cds;Parent=Msa1054730-mRNA-1 |
| chr7_2 | CDS | 27048940 | 27049269 | 27048940 | ID=Msa1054730-mRNA-1:cds;Parent=Msa1054730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
