Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508870 | XP_003600890.1 | 95.708 | 233 | 10 | 0 | 1 | 233 | 1 | 233 | 1.22e-161 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508870 | sp|Q8LDP4|CP19D_ARATH | 83.523 | 176 | 29 | 0 | 56 | 231 | 24 | 199 | 8.59e-106 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508870 | G7JB89 | 95.708 | 233 | 10 | 0 | 1 | 233 | 1 | 233 | 5.82e-162 | 456 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0508870 | 0.826613 | 2.464669e-54 | -8.615850e-47 |
| Msa0013050 | Msa0508870 | -0.811288 | 7.546000e-51 | -8.615850e-47 |
| Msa0023000 | Msa0508870 | 0.805969 | 1.032757e-49 | -8.615850e-47 |
| Msa0025730 | Msa0508870 | 0.807845 | 4.141671e-50 | -8.615850e-47 |
| Msa0027260 | Msa0508870 | 0.845541 | 3.807303e-59 | -8.615850e-47 |
| Msa0030380 | Msa0508870 | 0.801038 | 1.086943e-48 | -8.615850e-47 |
| Msa0032260 | Msa0508870 | 0.824416 | 8.168254e-54 | -8.615850e-47 |
| Msa0032580 | Msa0508870 | 0.863823 | 1.889841e-64 | -8.615850e-47 |
| Msa0040690 | Msa0508870 | 0.833000 | 6.856627e-56 | -8.615850e-47 |
| Msa0042280 | Msa0508870 | 0.813262 | 2.798502e-51 | -8.615850e-47 |
| Msa0043660 | Msa0508870 | 0.816834 | 4.508881e-52 | -8.615850e-47 |
| Msa0047160 | Msa0508870 | 0.808713 | 2.705719e-50 | -8.615850e-47 |
| Msa0052610 | Msa0508870 | 0.820447 | 6.827289e-53 | -8.615850e-47 |
| Msa0055180 | Msa0508870 | 0.805720 | 1.164884e-49 | -8.615850e-47 |
| Msa0058300 | Msa0508870 | 0.827429 | 1.572378e-54 | -8.615850e-47 |
| Msa0067870 | Msa0508870 | 0.804466 | 2.131776e-49 | -8.615850e-47 |
| Msa0068760 | Msa0508870 | 0.802863 | 4.584194e-49 | -8.615850e-47 |
| Msa0074320 | Msa0508870 | 0.833792 | 4.351244e-56 | -8.615850e-47 |
| Msa0080200 | Msa0508870 | 0.817428 | 3.314456e-52 | -8.615850e-47 |
| Msa0091570 | Msa0508870 | 0.842761 | 2.123069e-58 | -8.615850e-47 |
| Msa0094470 | Msa0508870 | 0.811994 | 5.297890e-51 | -8.615850e-47 |
| Msa0094950 | Msa0508870 | 0.817595 | 3.039630e-52 | -8.615850e-47 |
| Msa0097850 | Msa0508870 | 0.827929 | 1.192198e-54 | -8.615850e-47 |
| Msa0100740 | Msa0508870 | 0.820980 | 5.150036e-53 | -8.615850e-47 |
| Msa0115270 | Msa0508870 | 0.807161 | 5.786149e-50 | -8.615850e-47 |
| Msa0115390 | Msa0508870 | 0.843985 | 1.000482e-58 | -8.615850e-47 |
| Msa0121820 | Msa0508870 | 0.803681 | 3.104227e-49 | -8.615850e-47 |
| Msa0127310 | Msa0508870 | 0.853533 | 2.244595e-61 | -8.615850e-47 |
| Msa0128860 | Msa0508870 | 0.820623 | 6.218858e-53 | -8.615850e-47 |
| Msa0137040 | Msa0508870 | 0.807813 | 4.208724e-50 | -8.615850e-47 |
| Msa0138630 | Msa0508870 | 0.817456 | 3.266172e-52 | -8.615850e-47 |
| Msa0145730 | Msa0508870 | 0.825120 | 5.573085e-54 | -8.615850e-47 |
| Msa0160550 | Msa0508870 | 0.822911 | 1.838558e-53 | -8.615850e-47 |
| Msa0162770 | Msa0508870 | -0.805513 | 1.287156e-49 | -8.615850e-47 |
| Msa0165660 | Msa0508870 | 0.812820 | 3.496927e-51 | -8.615850e-47 |
| Msa0165950 | Msa0508870 | 0.807944 | 3.946813e-50 | -8.615850e-47 |
| Msa0167480 | Msa0508870 | 0.841084 | 5.887033e-58 | -8.615850e-47 |
| Msa0172970 | Msa0508870 | 0.865627 | 5.148699e-65 | -8.615850e-47 |
| Msa0173740 | Msa0508870 | 0.804472 | 2.125317e-49 | -8.615850e-47 |
| Msa0173820 | Msa0508870 | 0.801474 | 8.853811e-49 | -8.615850e-47 |
| Msa0174730 | Msa0508870 | 0.820090 | 8.240180e-53 | -8.615850e-47 |
| Msa0183460 | Msa0508870 | 0.809384 | 1.943611e-50 | -8.615850e-47 |
| Msa0183900 | Msa0508870 | 0.804424 | 2.175015e-49 | -8.615850e-47 |
| Msa0187690 | Msa0508870 | 0.826392 | 2.781858e-54 | -8.615850e-47 |
| Msa0187930 | Msa0508870 | 0.835486 | 1.631857e-56 | -8.615850e-47 |
| Msa0189300 | Msa0508870 | 0.805016 | 1.635897e-49 | -8.615850e-47 |
| Msa0193120 | Msa0508870 | 0.804229 | 2.387986e-49 | -8.615850e-47 |
| Msa0194480 | Msa0508870 | 0.819226 | 1.297787e-52 | -8.615850e-47 |
| Msa0194540 | Msa0508870 | 0.833450 | 5.294891e-56 | -8.615850e-47 |
| Msa0199690 | Msa0508870 | 0.834018 | 3.820366e-56 | -8.615850e-47 |
| Msa0199880 | Msa0508870 | 0.814992 | 1.161191e-51 | -8.615850e-47 |
| Msa0208350 | Msa0508870 | 0.809923 | 1.488514e-50 | -8.615850e-47 |
| Msa0211190 | Msa0508870 | 0.809825 | 1.562816e-50 | -8.615850e-47 |
| Msa0220720 | Msa0508870 | 0.841180 | 5.556002e-58 | -8.615850e-47 |
| Msa0226460 | Msa0508870 | 0.823459 | 1.369396e-53 | -8.615850e-47 |
| Msa0226470 | Msa0508870 | 0.809517 | 1.819455e-50 | -8.615850e-47 |
| Msa0228070 | Msa0508870 | 0.806630 | 7.493398e-50 | -8.615850e-47 |
| Msa0231100 | Msa0508870 | 0.829238 | 5.757204e-55 | -8.615850e-47 |
| Msa0231660 | Msa0508870 | 0.814219 | 1.722127e-51 | -8.615850e-47 |
| Msa0231880 | Msa0508870 | 0.811031 | 8.578797e-51 | -8.615850e-47 |
| Msa0236270 | Msa0508870 | 0.843087 | 1.738483e-58 | -8.615850e-47 |
| Msa0369050 | Msa0508870 | 0.831102 | 2.019244e-55 | -8.615850e-47 |
| Msa0369220 | Msa0508870 | 0.968094 | 3.430997e-128 | -8.615850e-47 |
| Msa0372340 | Msa0508870 | 0.824073 | 9.831689e-54 | -8.615850e-47 |
| Msa0376690 | Msa0508870 | 0.828706 | 7.743647e-55 | -8.615850e-47 |
| Msa0385580 | Msa0508870 | 0.836439 | 9.352983e-57 | -8.615850e-47 |
| Msa0387750 | Msa0508870 | 0.800328 | 1.517728e-48 | -8.615850e-47 |
| Msa0388050 | Msa0508870 | 0.801672 | 8.060564e-49 | -8.615850e-47 |
| Msa0392940 | Msa0508870 | 0.818893 | 1.545699e-52 | -8.615850e-47 |
| Msa0397540 | Msa0508870 | 0.805712 | 1.169137e-49 | -8.615850e-47 |
| Msa0398950 | Msa0508870 | 0.812941 | 3.289628e-51 | -8.615850e-47 |
| Msa0402330 | Msa0508870 | 0.811629 | 6.361774e-51 | -8.615850e-47 |
| Msa0402790 | Msa0508870 | 0.801994 | 6.922179e-49 | -8.615850e-47 |
| Msa0416400 | Msa0508870 | 0.803110 | 4.075323e-49 | -8.615850e-47 |
| Msa0421780 | Msa0508870 | -0.802196 | 6.292194e-49 | -8.615850e-47 |
| Msa0423040 | Msa0508870 | 0.803547 | 3.308633e-49 | -8.615850e-47 |
| Msa0429290 | Msa0508870 | 0.802411 | 5.681453e-49 | -8.615850e-47 |
| Msa0432770 | Msa0508870 | 0.819054 | 1.420774e-52 | -8.615850e-47 |
| Msa0437690 | Msa0508870 | -0.811831 | 5.750895e-51 | -8.615850e-47 |
| Msa0441130 | Msa0508870 | 0.828642 | 8.025524e-55 | -8.615850e-47 |
| Msa0443390 | Msa0508870 | 0.821912 | 3.137866e-53 | -8.615850e-47 |
| Msa0453230 | Msa0508870 | 0.817680 | 2.909079e-52 | -8.615850e-47 |
| Msa0458060 | Msa0508870 | 0.835948 | 1.246267e-56 | -8.615850e-47 |
| Msa0463260 | Msa0508870 | 0.880455 | 5.413402e-70 | -8.615850e-47 |
| Msa0465550 | Msa0508870 | 0.811032 | 8.573409e-51 | -8.615850e-47 |
| Msa0471590 | Msa0508870 | 0.836434 | 9.377803e-57 | -8.615850e-47 |
| Msa0241800 | Msa0508870 | 0.820845 | 5.530662e-53 | -8.615850e-47 |
| Msa0242230 | Msa0508870 | 0.818045 | 2.405419e-52 | -8.615850e-47 |
| Msa0242680 | Msa0508870 | 0.803560 | 3.288795e-49 | -8.615850e-47 |
| Msa0244780 | Msa0508870 | 0.834529 | 2.844102e-56 | -8.615850e-47 |
| Msa0260240 | Msa0508870 | 0.817605 | 3.023189e-52 | -8.615850e-47 |
| Msa0260280 | Msa0508870 | 0.816949 | 4.247191e-52 | -8.615850e-47 |
| Msa0262050 | Msa0508870 | 0.823167 | 1.602630e-53 | -8.615850e-47 |
| Msa0262310 | Msa0508870 | 0.838889 | 2.198422e-57 | -8.615850e-47 |
| Msa0264570 | Msa0508870 | 0.813986 | 1.938943e-51 | -8.615850e-47 |
| Msa0268130 | Msa0508870 | 0.831492 | 1.619363e-55 | -8.615850e-47 |
| Msa0280430 | Msa0508870 | 0.838083 | 3.549920e-57 | -8.615850e-47 |
| Msa0298700 | Msa0508870 | 0.806835 | 6.783395e-50 | -8.615850e-47 |
| Msa0298990 | Msa0508870 | 0.834885 | 2.313587e-56 | -8.615850e-47 |
| Msa0299870 | Msa0508870 | 0.829838 | 4.113270e-55 | -8.615850e-47 |
| Msa0304260 | Msa0508870 | 0.810357 | 1.199841e-50 | -8.615850e-47 |
| Msa0304590 | Msa0508870 | 0.832283 | 1.032551e-55 | -8.615850e-47 |
| Msa0304660 | Msa0508870 | 0.822132 | 2.789745e-53 | -8.615850e-47 |
| Msa0306710 | Msa0508870 | 0.842868 | 1.987370e-58 | -8.615850e-47 |
| Msa0331700 | Msa0508870 | 0.822663 | 2.099529e-53 | -8.615850e-47 |
| Msa0337240 | Msa0508870 | 0.851110 | 1.098850e-60 | -8.615850e-47 |
| Msa0337650 | Msa0508870 | 0.859927 | 2.946535e-63 | -8.615850e-47 |
| Msa0347680 | Msa0508870 | 0.845125 | 4.935051e-59 | -8.615850e-47 |
| Msa0351990 | Msa0508870 | 0.804056 | 2.594839e-49 | -8.615850e-47 |
| Msa0360990 | Msa0508870 | 0.814494 | 1.497356e-51 | -8.615850e-47 |
| Msa0506400 | Msa0508870 | 0.813127 | 2.994988e-51 | -8.615850e-47 |
| Msa0508590 | Msa0508870 | 0.868629 | 5.666668e-66 | -8.615850e-47 |
| Msa0508630 | Msa0508870 | 0.848188 | 7.188336e-60 | -8.615850e-47 |
| Msa0508870 | Msa0509950 | -0.811891 | 5.579205e-51 | -8.615850e-47 |
| Msa0508870 | Msa0526540 | 0.843971 | 1.009074e-58 | -8.615850e-47 |
| Msa0508870 | Msa0534900 | 0.822177 | 2.722803e-53 | -8.615850e-47 |
| Msa0508870 | Msa0541360 | 0.818689 | 1.719063e-52 | -8.615850e-47 |
| Msa0508870 | Msa0545080 | 0.814629 | 1.397874e-51 | -8.615850e-47 |
| Msa0508870 | Msa0546360 | 0.802041 | 6.772730e-49 | -8.615850e-47 |
| Msa0508870 | Msa0555450 | 0.808777 | 2.621945e-50 | -8.615850e-47 |
| Msa0508870 | Msa0571920 | 0.822471 | 2.327688e-53 | -8.615850e-47 |
| Msa0508870 | Msa0576940 | 0.852198 | 5.403848e-61 | -8.615850e-47 |
| Msa0508870 | Msa0589190 | 0.805073 | 1.592017e-49 | -8.615850e-47 |
| Msa0508870 | Msa0607510 | 0.802962 | 4.374113e-49 | -8.615850e-47 |
| Msa0508870 | Msa0608320 | 0.812609 | 3.889515e-51 | -8.615850e-47 |
| Msa0508870 | Msa0610390 | 0.821652 | 3.602840e-53 | -8.615850e-47 |
| Msa0508870 | Msa0615440 | 0.821633 | 3.639383e-53 | -8.615850e-47 |
| Msa0508870 | Msa0615580 | 0.807850 | 4.132917e-50 | -8.615850e-47 |
| Msa0508870 | Msa0616240 | 0.863705 | 2.056554e-64 | -8.615850e-47 |
| Msa0508870 | Msa0620890 | 0.814405 | 1.566591e-51 | -8.615850e-47 |
| Msa0508870 | Msa0621950 | 0.805301 | 1.426419e-49 | -8.615850e-47 |
| Msa0508870 | Msa0623700 | 0.803468 | 3.436361e-49 | -8.615850e-47 |
| Msa0508870 | Msa0631350 | 0.815452 | 9.180639e-52 | -8.615850e-47 |
| Msa0508870 | Msa0632870 | 0.804386 | 2.214378e-49 | -8.615850e-47 |
| Msa0508870 | Msa0650920 | 0.829228 | 5.787368e-55 | -8.615850e-47 |
| Msa0508870 | Msa0669760 | 0.805579 | 1.246904e-49 | -8.615850e-47 |
| Msa0508870 | Msa0671740 | 0.804955 | 1.684776e-49 | -8.615850e-47 |
| Msa0508870 | Msa0675410 | 0.805920 | 1.057387e-49 | -8.615850e-47 |
| Msa0508870 | Msa0677290 | 0.823674 | 1.220061e-53 | -8.615850e-47 |
| Msa0508870 | Msa0687630 | 0.810716 | 1.003649e-50 | -8.615850e-47 |
| Msa0508870 | Msa0688960 | 0.810945 | 8.956990e-51 | -8.615850e-47 |
| Msa0508870 | Msa0690250 | 0.809470 | 1.862777e-50 | -8.615850e-47 |
| Msa0508870 | Msa0691900 | 0.809726 | 1.640718e-50 | -8.615850e-47 |
| Msa0508870 | Msa0692940 | 0.812539 | 4.030122e-51 | -8.615850e-47 |
| Msa0508870 | Msa0698490 | 0.823078 | 1.681113e-53 | -8.615850e-47 |
| Msa0508870 | Msa0698660 | 0.824675 | 7.099186e-54 | -8.615850e-47 |
| Msa0508870 | Msa0699570 | 0.860068 | 2.672191e-63 | -8.615850e-47 |
| Msa0508870 | Msa0709500 | 0.802526 | 5.380689e-49 | -8.615850e-47 |
| Msa0508870 | Msa0719420 | 0.825092 | 5.659617e-54 | -8.615850e-47 |
| Msa0508870 | Msa0722020 | 0.831026 | 2.107823e-55 | -8.615850e-47 |
| Msa0508870 | Msa0733890 | 0.820694 | 5.989796e-53 | -8.615850e-47 |
| Msa0508870 | Msa0763020 | 0.826482 | 2.648452e-54 | -8.615850e-47 |
| Msa0508870 | Msa0763070 | 0.829474 | 5.044374e-55 | -8.615850e-47 |
| Msa0508870 | Msa0784860 | 0.851761 | 7.188215e-61 | -8.615850e-47 |
| Msa0508870 | Msa0789680 | 0.826952 | 2.044988e-54 | -8.615850e-47 |
| Msa0508870 | Msa0790850 | 0.815095 | 1.101616e-51 | -8.615850e-47 |
| Msa0508870 | Msa0798440 | 0.804589 | 2.008958e-49 | -8.615850e-47 |
| Msa0508870 | Msa0802410 | 0.819055 | 1.419837e-52 | -8.615850e-47 |
| Msa0508870 | Msa0805500 | 0.836215 | 1.066399e-56 | -8.615850e-47 |
| Msa0508870 | Msa0806920 | 0.801109 | 1.051376e-48 | -8.615850e-47 |
| Msa0508870 | Msa0812570 | 0.838527 | 2.728201e-57 | -8.615850e-47 |
| Msa0508870 | Msa0813720 | 0.847722 | 9.658623e-60 | -8.615850e-47 |
| Msa0508870 | Msa0831870 | 0.804738 | 1.870636e-49 | -8.615850e-47 |
| Msa0508870 | Msa0836660 | -0.800673 | 1.290505e-48 | -8.615850e-47 |
| Msa0508870 | Msa0847080 | 0.811775 | 5.915271e-51 | -8.615850e-47 |
| Msa0508870 | Msa0852860 | 0.827749 | 1.317150e-54 | -8.615850e-47 |
| Msa0508870 | Msa0854120 | 0.807051 | 6.104048e-50 | -8.615850e-47 |
| Msa0508870 | Msa0900630 | 0.824521 | 7.717908e-54 | -8.615850e-47 |
| Msa0508870 | Msa0926460 | 0.837823 | 4.140291e-57 | -8.615850e-47 |
| Msa0508870 | Msa0926850 | 0.806341 | 8.623851e-50 | -8.615850e-47 |
| Msa0508870 | Msa0933290 | 0.809806 | 1.577423e-50 | -8.615850e-47 |
| Msa0508870 | Msa0944190 | 0.802301 | 5.987226e-49 | -8.615850e-47 |
| Msa0508870 | Msa0965860 | 0.821803 | 3.324009e-53 | -8.615850e-47 |
| Msa0508870 | Msa0970030 | 0.804352 | 2.251408e-49 | -8.615850e-47 |
| Msa0508870 | Msa0970420 | 0.806299 | 8.801425e-50 | -8.615850e-47 |
| Msa0508870 | Msa0974810 | 0.823584 | 1.280030e-53 | -8.615850e-47 |
| Msa0508870 | Msa0999970 | 0.816086 | 6.627439e-52 | -8.615850e-47 |
| Msa0508870 | Msa1000690 | 0.814106 | 1.824155e-51 | -8.615850e-47 |
| Msa0508870 | Msa1006840 | 0.808615 | 2.838390e-50 | -8.615850e-47 |
| Msa0508870 | Msa1011680 | 0.827568 | 1.455954e-54 | -8.615850e-47 |
| Msa0508870 | Msa1012830 | 0.800921 | 1.148586e-48 | -8.615850e-47 |
| Msa0508870 | Msa1014500 | 0.811060 | 8.454655e-51 | -8.615850e-47 |
| Msa0508870 | Msa1019240 | 0.840980 | 6.271147e-58 | -8.615850e-47 |
| Msa0508870 | Msa1019260 | 0.841550 | 4.438996e-58 | -8.615850e-47 |
| Msa0508870 | Msa1030620 | 0.814090 | 1.839282e-51 | -8.615850e-47 |
| Msa0508870 | Msa1037420 | 0.823481 | 1.353538e-53 | -8.615850e-47 |
| Msa0508870 | Msa1046020 | 0.810740 | 9.917599e-51 | -8.615850e-47 |
| Msa0508870 | Msa1046060 | 0.806806 | 6.879841e-50 | -8.615850e-47 |
| Msa0508870 | Msa1054730 | 0.809335 | 1.990985e-50 | -8.615850e-47 |
| Msa0508870 | Msa1077030 | 0.810805 | 9.604085e-51 | -8.615850e-47 |
| Msa0508870 | Msa1080290 | 0.801726 | 7.858446e-49 | -8.615850e-47 |
| Msa0508870 | Msa1081150 | 0.816586 | 5.122835e-52 | -8.615850e-47 |
| Msa0508870 | Msa1084470 | 0.847927 | 8.485365e-60 | -8.615850e-47 |
| Msa0508870 | Msa1087710 | 0.815759 | 7.839948e-52 | -8.615850e-47 |
| Msa0508870 | Msa1091100 | 0.805881 | 1.077490e-49 | -8.615850e-47 |
| Msa0508870 | Msa1094420 | 0.809129 | 2.204253e-50 | -8.615850e-47 |
| Msa0508870 | Msa1104140 | 0.832472 | 9.270887e-56 | -8.615850e-47 |
| Msa0508870 | Msa1104210 | 0.851734 | 7.316380e-61 | -8.615850e-47 |
| Msa0508870 | Msa1108820 | 0.806338 | 8.636959e-50 | -8.615850e-47 |
| Msa0508870 | Msa1122820 | 0.801794 | 7.609870e-49 | -8.615850e-47 |
| Msa0508870 | Msa1123810 | 0.807433 | 5.067428e-50 | -8.615850e-47 |
| Msa0508870 | Msa1126120 | -0.813967 | 1.957633e-51 | -8.615850e-47 |
| Msa0508870 | Msa1126510 | 0.813621 | 2.333543e-51 | -8.615850e-47 |
| Msa0508870 | Msa1131560 | 0.827389 | 1.607430e-54 | -8.615850e-47 |
| Msa0508870 | Msa1134090 | 0.810195 | 1.300670e-50 | -8.615850e-47 |
| Msa0508870 | Msa1136540 | 0.802007 | 6.881308e-49 | -8.615850e-47 |
| Msa0508870 | Msa1137700 | 0.812974 | 3.236162e-51 | -8.615850e-47 |
| Msa0508870 | Msa1138870 | 0.847756 | 9.457104e-60 | -8.615850e-47 |
| Msa0508870 | Msa1143840 | 0.821938 | 3.094634e-53 | -8.615850e-47 |
| Msa0508870 | Msa1150500 | 0.819004 | 1.458422e-52 | -8.615850e-47 |
| Msa0508870 | Msa1165780 | 0.804993 | 1.654115e-49 | -8.615850e-47 |
| Msa0508870 | Msa1166010 | 0.840913 | 6.529278e-58 | -8.615850e-47 |
| Msa0508870 | Msa1166860 | 0.817053 | 4.026175e-52 | -8.615850e-47 |
| Msa0508870 | Msa1166870 | 0.848778 | 4.933787e-60 | -8.615850e-47 |
| Msa0508870 | Msa1171360 | 0.801319 | 9.521839e-49 | -8.615850e-47 |
| Msa0508870 | Msa1181850 | 0.803274 | 3.769457e-49 | -8.615850e-47 |
| Msa0508870 | Msa1193070 | 0.807293 | 5.425897e-50 | -8.615850e-47 |
| Msa0508870 | Msa1204890 | 0.802914 | 4.473609e-49 | -8.615850e-47 |
| Msa0508870 | Msa1218600 | 0.811000 | 8.714605e-51 | -8.615850e-47 |
| Msa0508870 | Msa1224810 | 0.808859 | 2.518360e-50 | -8.615850e-47 |
| Msa0508870 | Msa1237940 | 0.842316 | 2.785625e-58 | -8.615850e-47 |
| Msa0508870 | Msa1260130 | 0.802229 | 6.195317e-49 | -8.615850e-47 |
| Msa0508870 | Msa1265630 | 0.805567 | 1.254366e-49 | -8.615850e-47 |
| Msa0508870 | Msa1271210 | 0.803634 | 3.175122e-49 | -8.615850e-47 |
| Msa0508870 | Msa1275360 | 0.805416 | 1.348846e-49 | -8.615850e-47 |
| Msa0508870 | Msa1295110 | 0.802462 | 5.545405e-49 | -8.615850e-47 |
| Msa0508870 | Msa1296830 | 0.819651 | 1.038550e-52 | -8.615850e-47 |
| Msa0508870 | Msa1332040 | -0.801214 | 1.000864e-48 | -8.615850e-47 |
| Msa0508870 | Msa1335940 | 0.800916 | 1.151172e-48 | -8.615850e-47 |
| Msa0508870 | Msa1349570 | 0.804391 | 2.209201e-49 | -8.615850e-47 |
| Msa0508870 | Msa1356440 | 0.804105 | 2.533746e-49 | -8.615850e-47 |
| Msa0508870 | Msa1363330 | 0.842793 | 2.080943e-58 | -8.615850e-47 |
| Msa0508870 | Msa1371430 | 0.820756 | 5.798686e-53 | -8.615850e-47 |
| Msa0508870 | Msa1379760 | 0.828349 | 9.447835e-55 | -8.615850e-47 |
| Msa0508870 | Msa1385100 | 0.828278 | 9.828275e-55 | -8.615850e-47 |
| Msa0508870 | Msa1386600 | 0.843586 | 1.279626e-58 | -8.615850e-47 |
| Msa0508870 | Msa1392200 | 0.806583 | 7.667573e-50 | -8.615850e-47 |
| Msa0508870 | Msa1394290 | 0.814329 | 1.628303e-51 | -8.615850e-47 |
| Msa0508870 | Msa1397810 | 0.802357 | 5.829282e-49 | -8.615850e-47 |
| Msa0508870 | Msa1404190 | 0.813876 | 2.049848e-51 | -8.615850e-47 |
| Msa0508870 | Msa1415640 | 0.813453 | 2.540495e-51 | -8.615850e-47 |
| Msa0508870 | Msa1420990 | 0.830414 | 2.976465e-55 | -8.615850e-47 |
| Msa0508870 | Msa1444310 | 0.848006 | 8.069474e-60 | -8.615850e-47 |
| Msa0508870 | Msa1448690 | 0.831692 | 1.445083e-55 | -8.615850e-47 |
| Msa0508870 | Msa1450280 | 0.822213 | 2.672105e-53 | -8.615850e-47 |
| Msa0508870 | Msa1453620 | 0.802624 | 5.135486e-49 | -8.615850e-47 |
| Msa0508870 | Msa1457920 | 0.805506 | 1.291951e-49 | -8.615850e-47 |
| Msa0508870 | Msa1461490 | 0.823578 | 1.284518e-53 | -8.615850e-47 |
| Msa0508870 | Msa1465960 | 0.826012 | 3.425081e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508870 | MtrunA17_Chr3g0113441 | 95.708 | 233 | 10 | 0 | 1 | 233 | 1 | 233 | 1.12e-165 | 456 |
| Msa0508870 | MtrunA17_Chr3g0104751 | 85.294 | 170 | 25 | 0 | 62 | 231 | 32 | 201 | 1.37e-106 | 306 |
| Msa0508870 | MtrunA17_Chr7g0274841 | 68.452 | 168 | 53 | 0 | 65 | 232 | 5 | 172 | 2.07e-81 | 241 |
| Msa0508870 | MtrunA17_Chr4g0038431 | 65.497 | 171 | 59 | 0 | 62 | 232 | 2 | 172 | 3.83e-81 | 240 |
| Msa0508870 | MtrunA17_Chr3g0145501 | 66.667 | 168 | 56 | 0 | 65 | 232 | 13 | 180 | 1.11e-78 | 234 |
| Msa0508870 | MtrunA17_Chr4g0037281 | 48.927 | 233 | 95 | 4 | 1 | 231 | 5 | 215 | 5.53e-72 | 219 |
| Msa0508870 | MtrunA17_Chr1g0193711 | 63.277 | 177 | 55 | 3 | 58 | 231 | 78 | 247 | 1.66e-71 | 218 |
| Msa0508870 | MtrunA17_Chr7g0260441 | 63.529 | 170 | 61 | 1 | 66 | 234 | 9 | 178 | 5.15e-71 | 228 |
| Msa0508870 | MtrunA17_Chr7g0270991 | 61.988 | 171 | 57 | 2 | 62 | 231 | 94 | 257 | 1.06e-69 | 214 |
| Msa0508870 | MtrunA17_Chr1g0213971 | 62.069 | 174 | 55 | 3 | 62 | 231 | 75 | 241 | 3.16e-68 | 210 |
| Msa0508870 | MtrunA17_Chr8g0374621 | 59.064 | 171 | 68 | 2 | 65 | 233 | 5 | 175 | 9.45e-65 | 205 |
| Msa0508870 | MtrunA17_Chr4g0045321 | 56.805 | 169 | 71 | 2 | 65 | 231 | 5 | 173 | 4.56e-60 | 192 |
| Msa0508870 | MtrunA17_Chr8g0353571 | 56.548 | 168 | 69 | 3 | 66 | 231 | 20 | 185 | 3.88e-58 | 182 |
| Msa0508870 | MtrunA17_Chr3g0138061 | 51.412 | 177 | 81 | 2 | 59 | 230 | 1 | 177 | 2.45e-51 | 178 |
| Msa0508870 | MtrunA17_Chr1g0149061 | 55.422 | 166 | 72 | 2 | 66 | 230 | 9 | 173 | 1.58e-50 | 175 |
| Msa0508870 | MtrunA17_Chr2g0321111 | 48.366 | 153 | 66 | 5 | 77 | 227 | 470 | 611 | 7.23e-35 | 130 |
| Msa0508870 | MtrunA17_Chr7g0266721 | 49.254 | 134 | 56 | 4 | 77 | 209 | 18 | 140 | 3.53e-33 | 117 |
| Msa0508870 | MtrunA17_Chr8g0351571 | 48.592 | 142 | 61 | 4 | 77 | 217 | 9 | 139 | 1.87e-31 | 113 |
| Msa0508870 | MtrunA17_Chr5g0401141 | 48.507 | 134 | 57 | 4 | 78 | 210 | 354 | 476 | 4.32e-27 | 108 |
| Msa0508870 | MtrunA17_Chr3g0122871 | 56.250 | 64 | 28 | 0 | 157 | 220 | 56 | 119 | 5.89e-21 | 84.7 |
| Msa0508870 | MtrunA17_Chr2g0288371 | 41.212 | 165 | 68 | 9 | 78 | 234 | 22 | 165 | 2.51e-20 | 89.0 |
| Msa0508870 | MtrunA17_Chr6g0484281 | 37.107 | 159 | 79 | 7 | 77 | 225 | 9 | 156 | 8.56e-19 | 84.7 |
| Msa0508870 | MtrunA17_Chr8g0357591 | 36.478 | 159 | 80 | 7 | 77 | 225 | 9 | 156 | 1.22e-17 | 81.3 |
| Msa0508870 | MtrunA17_Chr1g0199071 | 32.237 | 152 | 84 | 7 | 78 | 227 | 89 | 223 | 7.90e-13 | 65.9 |
| Msa0508870 | MtrunA17_Chr2g0305071 | 29.193 | 161 | 82 | 7 | 73 | 211 | 87 | 237 | 9.67e-13 | 66.2 |
| Msa0508870 | MtrunA17_Chr1g0163031 | 25.561 | 223 | 129 | 10 | 11 | 227 | 32 | 223 | 4.18e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508870 | AT2G29960.1 | 83.523 | 176 | 29 | 0 | 56 | 231 | 24 | 199 | 8.74e-107 | 306 |
| Msa0508870 | AT2G29960.3 | 83.523 | 176 | 29 | 0 | 56 | 231 | 24 | 199 | 8.74e-107 | 306 |
| Msa0508870 | AT5G58710.1 | 81.250 | 176 | 33 | 0 | 56 | 231 | 27 | 202 | 1.35e-106 | 306 |
| Msa0508870 | AT3G55920.1 | 65.517 | 232 | 75 | 3 | 1 | 232 | 1 | 227 | 2.53e-106 | 306 |
| Msa0508870 | AT2G29960.2 | 78.977 | 176 | 27 | 1 | 56 | 231 | 24 | 189 | 1.59e-97 | 283 |
| Msa0508870 | AT4G38740.1 | 69.048 | 168 | 52 | 0 | 65 | 232 | 5 | 172 | 1.82e-84 | 249 |
| Msa0508870 | AT2G21130.1 | 69.231 | 169 | 52 | 0 | 65 | 233 | 6 | 174 | 7.00e-84 | 247 |
| Msa0508870 | AT2G16600.1 | 67.857 | 168 | 54 | 0 | 65 | 232 | 6 | 173 | 6.10e-83 | 245 |
| Msa0508870 | AT3G56070.1 | 67.442 | 172 | 56 | 0 | 62 | 233 | 2 | 173 | 1.07e-80 | 239 |
| Msa0508870 | AT3G56070.2 | 67.442 | 172 | 56 | 0 | 62 | 233 | 2 | 173 | 1.07e-80 | 239 |
| Msa0508870 | AT4G34870.1 | 66.071 | 168 | 57 | 0 | 65 | 232 | 5 | 172 | 2.31e-77 | 231 |
| Msa0508870 | AT4G34960.1 | 62.573 | 171 | 63 | 1 | 62 | 231 | 45 | 215 | 3.91e-76 | 229 |
| Msa0508870 | AT3G62030.1 | 58.163 | 196 | 72 | 3 | 37 | 231 | 70 | 256 | 4.03e-73 | 223 |
| Msa0508870 | AT3G62030.3 | 64.912 | 171 | 52 | 2 | 62 | 231 | 92 | 255 | 6.04e-73 | 223 |
| Msa0508870 | AT3G62030.2 | 58.163 | 196 | 72 | 3 | 37 | 231 | 123 | 309 | 1.61e-72 | 223 |
| Msa0508870 | AT5G13120.1 | 61.494 | 174 | 56 | 3 | 62 | 231 | 88 | 254 | 1.45e-71 | 219 |
| Msa0508870 | AT5G13120.2 | 61.494 | 174 | 56 | 3 | 62 | 231 | 84 | 250 | 1.54e-71 | 219 |
| Msa0508870 | AT3G63400.2 | 61.765 | 170 | 64 | 1 | 66 | 234 | 9 | 178 | 2.59e-67 | 213 |
| Msa0508870 | AT3G63400.3 | 61.765 | 170 | 64 | 1 | 66 | 234 | 9 | 178 | 1.64e-65 | 213 |
| Msa0508870 | AT3G63400.4 | 61.765 | 170 | 64 | 1 | 66 | 234 | 9 | 178 | 1.64e-65 | 213 |
| Msa0508870 | AT3G63400.1 | 61.765 | 170 | 64 | 1 | 66 | 234 | 9 | 178 | 1.64e-65 | 213 |
| Msa0508870 | AT2G15790.1 | 61.538 | 169 | 63 | 2 | 65 | 231 | 5 | 173 | 7.56e-65 | 205 |
| Msa0508870 | AT2G16600.2 | 57.143 | 168 | 50 | 1 | 65 | 232 | 6 | 151 | 1.61e-61 | 190 |
| Msa0508870 | AT2G38730.1 | 58.929 | 168 | 65 | 3 | 66 | 231 | 34 | 199 | 1.28e-59 | 187 |
| Msa0508870 | AT4G34960.2 | 65.354 | 127 | 44 | 0 | 62 | 188 | 45 | 171 | 2.24e-59 | 185 |
| Msa0508870 | AT4G32420.1 | 51.497 | 167 | 80 | 1 | 65 | 230 | 8 | 174 | 1.65e-47 | 167 |
| Msa0508870 | AT4G32420.5 | 51.497 | 167 | 80 | 1 | 65 | 230 | 8 | 174 | 1.65e-47 | 167 |
| Msa0508870 | AT4G32420.3 | 51.497 | 167 | 80 | 1 | 65 | 230 | 8 | 174 | 1.65e-47 | 167 |
| Msa0508870 | AT4G32420.6 | 51.497 | 167 | 80 | 1 | 65 | 230 | 8 | 174 | 1.65e-47 | 167 |
| Msa0508870 | AT3G22920.1 | 48.837 | 172 | 76 | 5 | 65 | 232 | 5 | 168 | 1.45e-45 | 152 |
| Msa0508870 | AT4G32420.4 | 51.592 | 157 | 75 | 1 | 65 | 220 | 8 | 164 | 1.05e-43 | 157 |
| Msa0508870 | AT3G44600.1 | 47.712 | 153 | 67 | 5 | 77 | 227 | 484 | 625 | 7.02e-34 | 128 |
| Msa0508870 | AT2G36130.1 | 49.254 | 134 | 56 | 4 | 77 | 209 | 18 | 140 | 8.00e-34 | 119 |
| Msa0508870 | AT1G01940.1 | 51.111 | 135 | 54 | 4 | 77 | 210 | 9 | 132 | 3.21e-32 | 115 |
| Msa0508870 | AT5G67530.1 | 43.791 | 153 | 73 | 5 | 78 | 228 | 353 | 494 | 4.90e-27 | 108 |
| Msa0508870 | AT4G33060.1 | 45.161 | 124 | 55 | 5 | 78 | 199 | 22 | 134 | 5.78e-23 | 97.1 |
| Msa0508870 | AT1G53720.2 | 35.849 | 159 | 81 | 7 | 77 | 225 | 9 | 156 | 3.07e-18 | 82.8 |
| Msa0508870 | AT1G53720.1 | 35.849 | 159 | 81 | 7 | 77 | 225 | 9 | 156 | 7.92e-18 | 82.4 |
Find 70 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAAGTGGAACACTGATTT+TGG | 0.193415 | 3_4:-57094440 | Msa0508870:CDS |
| TACTTATCAATGGCAAATTC+TGG | 0.241652 | 3_4:-57091811 | Msa0508870:CDS |
| GAACAAAATTTGCGGATTAC+AGG | 0.253431 | 3_4:-57091248 | Msa0508870:three_prime_UTR |
| AGAGATTGATGGAAAATTAA+TGG | 0.267310 | 3_4:-57094133 | Msa0508870:CDS |
| TGCTTTCTTTCAGCTCAAAT+TGG | 0.284916 | 3_4:-57094380 | Msa0508870:CDS |
| AATACCAAGCTTCATGGTTC+AGG | 0.307705 | 3_4:-57092053 | Msa0508870:CDS |
| AGAGGTGGAGAATCAATTTA+TGG | 0.308670 | 3_4:-57092004 | Msa0508870:CDS |
| CATCATCATCCAAAAGAAAA+TGG | 0.310670 | 3_4:-57094470 | Msa0508870:exon |
| GTATTCGGCAAGGTACTTTC+TGG | 0.319080 | 3_4:-57091417 | Msa0508870:CDS |
| GGGAAGCCTCTTCATTATAA+AGG | 0.323018 | 3_4:-57092094 | Msa0508870:CDS |
| TCTAAATTGGTCTTGCTAAA+GGG | 0.337350 | 3_4:-57091177 | Msa0508870:three_prime_UTR |
| TTCTAAATTGGTCTTGCTAA+AGG | 0.358280 | 3_4:-57091178 | Msa0508870:three_prime_UTR |
| TAATATGACAACCGTACGTT+TGG | 0.368386 | 3_4:+57091344 | None:intergenic |
| ATGTGTCAGCACACTTAGTT+AGG | 0.374971 | 3_4:+57094540 | None:intergenic |
| ACTATATTCTTGTAACCATT+AGG | 0.386796 | 3_4:+57091049 | None:intergenic |
| CAGCTCAAATTGGTTGAAAA+CGG | 0.390108 | 3_4:-57094370 | Msa0508870:CDS |
| GATGGACGCCATGTTGTATT+CGG | 0.407292 | 3_4:-57091432 | Msa0508870:CDS |
| GAGATTGATGGAAAATTAAT+GGG | 0.411357 | 3_4:-57094132 | Msa0508870:intron |
| TGCTTTAGGCCGCATAGTCA+TGG | 0.419357 | 3_4:-57092382 | Msa0508870:intron |
| TAGGATAATACCAAGCTTCA+TGG | 0.419916 | 3_4:-57092059 | Msa0508870:CDS |
| AACTTCAAGCTGAAGCATAC+TGG | 0.421126 | 3_4:-57091962 | Msa0508870:CDS |
| TGTCATTAGAAGAATCTTGA+TGG | 0.432704 | 3_4:+57094344 | None:intergenic |
| CCTCCAAATCATCTTCCAAA+AGG | 0.453984 | 3_4:+57094184 | None:intergenic |
| GGAAGCCTCTTCATTATAAA+GGG | 0.457025 | 3_4:-57092093 | Msa0508870:CDS |
| AAGTAAATGAACAAAATTTG+CGG | 0.458182 | 3_4:-57091256 | Msa0508870:three_prime_UTR |
| CGGCAAGGTACTTTCTGGTA+TGG | 0.459775 | 3_4:-57091412 | Msa0508870:CDS |
| TCGGTACTGTGGTCCCAAAA+AGG | 0.462738 | 3_4:+57092358 | None:intergenic |
| ATAAACTTACTGAGTGATGA+TGG | 0.463607 | 3_4:+57094311 | None:intergenic |
| CTAAATTGGTCTTGCTAAAG+GGG | 0.471631 | 3_4:-57091176 | Msa0508870:three_prime_UTR |
| AATCACATTTCAGGAGAGAA+AGG | 0.481742 | 3_4:-57092130 | Msa0508870:intron |
| AATATGACAACCGTACGTTT+GGG | 0.483233 | 3_4:+57091345 | None:intergenic |
| ACTTATCAATGGCAAATTCT+GGG | 0.488040 | 3_4:-57091810 | Msa0508870:CDS |
| AACTTCCGTGCACTTTGTAC+AGG | 0.492063 | 3_4:-57092238 | Msa0508870:intron |
| ATCACATTTCAGGAGAGAAA+GGG | 0.503138 | 3_4:-57092129 | Msa0508870:intron |
| TTTGGAGGGTGTGACCAAAA+AGG | 0.504511 | 3_4:-57094169 | Msa0508870:CDS |
| AAGCTGAAGCATACTGGTCC+AGG | 0.505316 | 3_4:-57091956 | Msa0508870:intron |
| TGAAGCTTGGTATTATCCTA+TGG | 0.510024 | 3_4:+57092062 | None:intergenic |
| GCTTTAGGCCGCATAGTCAT+GGG | 0.510578 | 3_4:-57092381 | Msa0508870:intron |
| CTCCAAATCATCTTCCAAAA+GGG | 0.519414 | 3_4:+57094185 | None:intergenic |
| GGTGATTTCACCAGTGGTGA+TGG | 0.524961 | 3_4:-57092028 | Msa0508870:CDS |
| ATACCAAGCTTCATGGTTCA+GGG | 0.533844 | 3_4:-57092052 | Msa0508870:CDS |
| GTCATTAGAAGAATCTTGAT+GGG | 0.538100 | 3_4:+57094345 | None:intergenic |
| GCGCTCCCTTTATAATGAAG+AGG | 0.540044 | 3_4:+57092088 | None:intergenic |
| CAGGGTGGTGATTTCACCAG+TGG | 0.551230 | 3_4:-57092034 | Msa0508870:CDS |
| TCCACCTCTTCCATCACCAC+TGG | 0.551323 | 3_4:+57092018 | None:intergenic |
| TTGGTCTTGCTAAAGGGGAA+AGG | 0.552536 | 3_4:-57091171 | Msa0508870:three_prime_UTR |
| ATTGTCAGGATACTTATCAA+TGG | 0.553233 | 3_4:-57091821 | Msa0508870:intron |
| CGGTTGTCATATTAGACAGT+GGG | 0.555823 | 3_4:-57091335 | Msa0508870:CDS |
| ATAAAGGGAGCGCATTCCAT+AGG | 0.567564 | 3_4:-57092078 | Msa0508870:CDS |
| CCACCCTGAACCATGAAGCT+TGG | 0.568403 | 3_4:+57092049 | None:intergenic |
| AAAATAGTCTTGAAATTCAG+AGG | 0.576402 | 3_4:+57091086 | None:intergenic |
| ACCAGTGGTGATGGAAGAGG+TGG | 0.583192 | 3_4:-57092019 | Msa0508870:CDS |
| GAAGCAGAAGGAAGTGAAAG+TGG | 0.583276 | 3_4:-57091372 | Msa0508870:CDS |
| AAAATGGCGTTCAGAGCAAG+TGG | 0.585619 | 3_4:-57094454 | Msa0508870:CDS |
| TCACATTTCAGGAGAGAAAG+GGG | 0.596966 | 3_4:-57092128 | Msa0508870:intron |
| TTGTACAAGATTGAAGCAGA+AGG | 0.601264 | 3_4:-57091384 | Msa0508870:CDS |
| AGCTACCTGTACAAAGTGCA+CGG | 0.605969 | 3_4:+57092233 | None:intergenic |
| AAGTGGCTCTCCCAAACGTA+CGG | 0.616615 | 3_4:-57091355 | Msa0508870:CDS |
| TTCACCAGTGGTGATGGAAG+AGG | 0.616816 | 3_4:-57092022 | Msa0508870:CDS |
| ACCACAGTACCGAAAACTGC+AGG | 0.618835 | 3_4:-57092348 | Msa0508870:intron |
| ATTTCAGGAGAGAAAGGGGT+AGG | 0.623842 | 3_4:-57092124 | Msa0508870:intron |
| TTTGAGCTGAAAGAAAGCAA+TGG | 0.628836 | 3_4:+57094384 | None:intergenic |
| AATTCTGGGCAAGATACCAA+TGG | 0.655747 | 3_4:-57091796 | Msa0508870:CDS |
| ACGCCATGTTGTATTCGGCA+AGG | 0.658256 | 3_4:-57091427 | Msa0508870:CDS |
| ACGGTTGTCATATTAGACAG+TGG | 0.685203 | 3_4:-57091336 | Msa0508870:CDS |
| TTAATGGTAAAGTATACACA+TGG | 0.700938 | 3_4:+57091277 | None:intergenic |
| AGAAAGCAATGGTTGCGCAG+AGG | 0.702776 | 3_4:+57094395 | None:intergenic |
| GTACCTTGCCGAATACAACA+TGG | 0.711169 | 3_4:+57091424 | None:intergenic |
| GGTTGTCATATTAGACAGTG+GGG | 0.725680 | 3_4:-57091334 | Msa0508870:CDS |
| CCAAGCTTCATGGTTCAGGG+TGG | 0.734538 | 3_4:-57092049 | Msa0508870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTCCTAA+TGG | - | chr3_4:57094536-57094555 | Msa0508870:five_prime_UTR | 10.0% |
| !! | GTTATTTATTTGATTATGTT+GGG | - | chr3_4:57091535-57091554 | Msa0508870:intron | 15.0% |
| !! | AAACATTTATAAAATGAATG+AGG | - | chr3_4:57092771-57092790 | Msa0508870:intron | 15.0% |
| !!! | ATATTTATTTACACATGTTT+TGG | - | chr3_4:57093290-57093309 | Msa0508870:intron | 15.0% |
| !! | CATTGTTTATAATATTTGAA+AGG | + | chr3_4:57093973-57093992 | None:intergenic | 15.0% |
| !!! | AATTTTGTTCATTTACTTAA+TGG | + | chr3_4:57094342-57094361 | None:intergenic | 15.0% |
| !! | ATATCTATCAATGATGATTT+AGG | + | chr3_4:57091345-57091364 | None:intergenic | 20.0% |
| !! | CTTAAAAACATAGAAAAAAG+TGG | + | chr3_4:57091391-57091410 | None:intergenic | 20.0% |
| !!! | CACTTTTTTCTATGTTTTTA+AGG | - | chr3_4:57091389-57091408 | Msa0508870:CDS | 20.0% |
| !! | GGTTATTTATTTGATTATGT+TGG | - | chr3_4:57091534-57091553 | Msa0508870:intron | 20.0% |
| !! | TTTCAAATTAAGTGTAAAGA+AGG | - | chr3_4:57091596-57091615 | Msa0508870:intron | 20.0% |
| !! | TTCAAATTAAGTGTAAAGAA+GGG | - | chr3_4:57091597-57091616 | Msa0508870:intron | 20.0% |
| !! | CTCAAATGTATATTAGAATA+TGG | - | chr3_4:57092857-57092876 | Msa0508870:intron | 20.0% |
| !!! | TAATATTTTTAGTGTTGTGT+TGG | - | chr3_4:57092943-57092962 | Msa0508870:intron | 20.0% |
| !!! | TACAAACATTATCTTGTTTA+TGG | + | chr3_4:57093720-57093739 | None:intergenic | 20.0% |
| !! | AAGTAAATGAACAAAATTTG+CGG | - | chr3_4:57094344-57094363 | Msa0508870:CDS | 20.0% |
| !!! | CTTGTTTTTCTTTTCTAAAT+TGG | - | chr3_4:57094410-57094429 | Msa0508870:CDS | 20.0% |
| ! | TTGATTCATTCATTCATTTC+TGG | - | chr3_4:57091311-57091330 | Msa0508870:exon | 25.0% |
| ! | TGATTCATTCATTCATTTCT+GGG | - | chr3_4:57091312-57091331 | Msa0508870:exon | 25.0% |
| !! | TACATCAAAATACACCTTTT+TGG | + | chr3_4:57091448-57091467 | None:intergenic | 25.0% |
| !!! | TATTTTGATGTAGAGATTGA+TGG | - | chr3_4:57091456-57091475 | Msa0508870:intron | 25.0% |
| ! | AGAGATTGATGGAAAATTAA+TGG | - | chr3_4:57091467-57091486 | Msa0508870:intron | 25.0% |
| ! | GAGATTGATGGAAAATTAAT+GGG | - | chr3_4:57091468-57091487 | Msa0508870:intron | 25.0% |
| !!! | CTTATCACAAAGTTTTGATT+TGG | - | chr3_4:57091513-57091532 | Msa0508870:intron | 25.0% |
| !! | TATTTGATTATGTTGGGTTT+TGG | - | chr3_4:57091541-57091560 | Msa0508870:intron | 25.0% |
| !! | ATTTGATTATGTTGGGTTTT+GGG | - | chr3_4:57091542-57091561 | Msa0508870:intron | 25.0% |
| ! | TCAAATTAAGTGTAAAGAAG+GGG | - | chr3_4:57091598-57091617 | Msa0508870:intron | 25.0% |
| !!! | ATGTATTGATTGATGATAGA+AGG | - | chr3_4:57091730-57091749 | Msa0508870:intron | 25.0% |
| !!! | TGTATTGATTGATGATAGAA+GGG | - | chr3_4:57091731-57091750 | Msa0508870:intron | 25.0% |
| !!! | AGGGTTATTTTATTCTGAAA+AGG | - | chr3_4:57091759-57091778 | Msa0508870:intron | 25.0% |
| ! | GTTTGGATTATTCATGAATT+TGG | - | chr3_4:57092008-57092027 | Msa0508870:CDS | 25.0% |
| ! | TCATGAATTTGGAAAAATCA+TGG | - | chr3_4:57092019-57092038 | Msa0508870:CDS | 25.0% |
| !! | CAAAAACTATACTTTGAGTT+TGG | - | chr3_4:57092065-57092084 | Msa0508870:CDS | 25.0% |
| !!! | AGGGTTATTTTATTCTGAAA+TGG | - | chr3_4:57091759-57091778 | Msa0508870:intron | 25.0% |
| !!! | GGGTTATTTTATTCTGAAAT+GGG | - | chr3_4:57092103-57092122 | Msa0508870:CDS | 25.0% |
| !!! | ATGTTTCTTTAAGCTTTGTT+TGG | - | chr3_4:57092530-57092549 | Msa0508870:intron | 25.0% |
| !!! | TTTAAGCTTTGTTTGGAAAT+TGG | - | chr3_4:57092537-57092556 | Msa0508870:intron | 25.0% |
| ! | TAGGGAAAAAAAAAAGAGTT+TGG | - | chr3_4:57092561-57092580 | Msa0508870:intron | 25.0% |
| ! | AGGGAAAAAAAAAAGAGTTT+GGG | - | chr3_4:57092562-57092581 | Msa0508870:intron | 25.0% |
| ! | GGGAAATGATTATTATAGAT+CGG | + | chr3_4:57092644-57092663 | None:intergenic | 25.0% |
| ! | AAAATGATGTTTCTTGCTTT+AGG | - | chr3_4:57093204-57093223 | Msa0508870:intron | 25.0% |
| ! | GATTGATCCTAAATTATAGT+TGG | + | chr3_4:57093412-57093431 | None:intergenic | 25.0% |
| !! | AACATTATCTTGTTTATGGA+TGG | + | chr3_4:57093716-57093735 | None:intergenic | 25.0% |
| ! | TATATTCCATTGTTTACACA+TGG | - | chr3_4:57093920-57093939 | Msa0508870:intron | 25.0% |
| ! | TTAATGGTAAAGTATACACA+TGG | + | chr3_4:57094326-57094345 | None:intergenic | 25.0% |
| !! | AAAATAGTCTTGAAATTCAG+AGG | + | chr3_4:57094517-57094536 | None:intergenic | 25.0% |
| ! | ACTATATTCTTGTAACCATT+AGG | + | chr3_4:57094554-57094573 | None:intergenic | 25.0% |
| CATCATCATCCAAAAGAAAA+TGG | - | chr3_4:57091130-57091149 | Msa0508870:three_prime_UTR | 30.0% | |
| GTCATTAGAAGAATCTTGAT+GGG | + | chr3_4:57091258-57091277 | None:intergenic | 30.0% | |
| TGTCATTAGAAGAATCTTGA+TGG | + | chr3_4:57091259-57091278 | None:intergenic | 30.0% | |
| ATAAACTTACTGAGTGATGA+TGG | + | chr3_4:57091292-57091311 | None:intergenic | 30.0% | |
| !! | TGTTTTTAAGGATACCCTTT+TGG | - | chr3_4:57091401-57091420 | Msa0508870:CDS | 30.0% |
| !!! | ATTGTTTTTGGGTGATGATT+TGG | - | chr3_4:57091566-57091585 | Msa0508870:intron | 30.0% |
| !! | TATAGTTTAGCTTGATGCAT+CGG | - | chr3_4:57091626-57091645 | Msa0508870:intron | 30.0% |
| AGAAGTTTATTTGTTCCATG+AGG | - | chr3_4:57091668-57091687 | Msa0508870:intron | 30.0% | |
| AATACATACTCACAACAACA+AGG | + | chr3_4:57091717-57091736 | None:intergenic | 30.0% | |
| ! | TTGATGATAGAAGGGAAATA+AGG | - | chr3_4:57091739-57091758 | Msa0508870:intron | 30.0% |
| TGATGATAGAAGGGAAATAA+GGG | - | chr3_4:57091740-57091759 | Msa0508870:intron | 30.0% | |
| TGAAAAGGAATTGAACATGA+TGG | - | chr3_4:57091774-57091793 | Msa0508870:CDS | 30.0% | |
| TCATTAGACTGCTTCAAAAT+AGG | + | chr3_4:57091917-57091936 | None:intergenic | 30.0% | |
| AATAATCCAAACATACACCA+AGG | + | chr3_4:57092000-57092019 | None:intergenic | 30.0% | |
| ! | ATACTTTGAGTTTGGATCAA+AGG | - | chr3_4:57092073-57092092 | Msa0508870:CDS | 30.0% |
| ! | TACTTTGAGTTTGGATCAAA+GGG | - | chr3_4:57092074-57092093 | Msa0508870:CDS | 30.0% |
| TTTGGATCAAAGGGAAATAA+GGG | - | chr3_4:57092083-57092102 | Msa0508870:CDS | 30.0% | |
| ! | TTTGAAATAAGCGGTACTTT+AGG | + | chr3_4:57092247-57092266 | None:intergenic | 30.0% |
| !! | TTGGAATGCTTTGAAATAAG+CGG | + | chr3_4:57092256-57092275 | None:intergenic | 30.0% |
| TATGTCGTAAAAGTTTGCAT+CGG | + | chr3_4:57092282-57092301 | None:intergenic | 30.0% | |
| TTTACGACATAAGTGTATGT+TGG | - | chr3_4:57092291-57092310 | Msa0508870:intron | 30.0% | |
| ! | ACAATGGATTTGATACGATA+GGG | - | chr3_4:57092351-57092370 | Msa0508870:CDS | 30.0% |
| TTGAAGTTTCAACAAAATCG+CGG | - | chr3_4:57092386-57092405 | Msa0508870:intron | 30.0% | |
| AGTGTATGTTTGGATTTGAT+GGG | + | chr3_4:57092446-57092465 | None:intergenic | 30.0% | |
| TAGTGTATGTTTGGATTTGA+TGG | + | chr3_4:57092447-57092466 | None:intergenic | 30.0% | |
| GTAAGATAAATCATTCTCCA+GGG | + | chr3_4:57092491-57092510 | None:intergenic | 30.0% | |
| TGTAAGATAAATCATTCTCC+AGG | + | chr3_4:57092492-57092511 | None:intergenic | 30.0% | |
| GAGAATGATTTATCTTACAC+TGG | - | chr3_4:57092493-57092512 | Msa0508870:intron | 30.0% | |
| GGGAAAAAAAAAAGAGTTTG+GGG | - | chr3_4:57092563-57092582 | Msa0508870:intron | 30.0% | |
| GGAAAAAAAAAAGAGTTTGG+GGG | - | chr3_4:57092564-57092583 | Msa0508870:intron | 30.0% | |
| ATTATAGATCGGTCTATTGT+TGG | + | chr3_4:57092633-57092652 | None:intergenic | 30.0% | |
| !! | TTTTGGTCAAGCTTTTAGAA+GGG | + | chr3_4:57092678-57092697 | None:intergenic | 30.0% |
| ! | TTTGGTTTCATGTGAAAATC+TGG | - | chr3_4:57093308-57093327 | Msa0508870:intron | 30.0% |
| GGATCAATCTTGAAATTTCT+AGG | - | chr3_4:57093423-57093442 | Msa0508870:intron | 30.0% | |
| ATTGAACAGAATCACATTTC+AGG | - | chr3_4:57093461-57093480 | Msa0508870:intron | 30.0% | |
| ATTGTCAGGATACTTATCAA+TGG | - | chr3_4:57093779-57093798 | Msa0508870:intron | 30.0% | |
| TACTTATCAATGGCAAATTC+TGG | - | chr3_4:57093789-57093808 | Msa0508870:intron | 30.0% | |
| ACTTATCAATGGCAAATTCT+GGG | - | chr3_4:57093790-57093809 | Msa0508870:intron | 30.0% | |
| TAACAACAGTAAAAACTAGC+TGG | - | chr3_4:57093841-57093860 | Msa0508870:intron | 30.0% | |
| TAGGTTGTGAGATTAAAGAA+AGG | + | chr3_4:57094118-57094137 | None:intergenic | 30.0% | |
| AAAACATATGGATGCATGTT+AGG | + | chr3_4:57094137-57094156 | None:intergenic | 30.0% | |
| !! | TTCTAAATTGGTCTTGCTAA+AGG | - | chr3_4:57094422-57094441 | Msa0508870:CDS | 30.0% |
| !! | TCTAAATTGGTCTTGCTAAA+GGG | - | chr3_4:57094423-57094442 | Msa0508870:CDS | 30.0% |
| ! | TAAAGGGGAAAGGATTTTAA+GGG | - | chr3_4:57094439-57094458 | Msa0508870:CDS | 30.0% |
| !!! | TGATTTTGGCTTGTCTCATT+TGG | - | chr3_4:57091174-57091193 | Msa0508870:three_prime_UTR | 35.0% |
| TTTGAGCTGAAAGAAAGCAA+TGG | + | chr3_4:57091219-57091238 | None:intergenic | 35.0% | |
| TGCTTTCTTTCAGCTCAAAT+TGG | - | chr3_4:57091220-57091239 | Msa0508870:three_prime_UTR | 35.0% | |
| CAGCTCAAATTGGTTGAAAA+CGG | - | chr3_4:57091230-57091249 | Msa0508870:three_prime_UTR | 35.0% | |
| !! | TACCCTTTTGGAAGATGATT+TGG | - | chr3_4:57091413-57091432 | Msa0508870:CDS | 35.0% |
| CTCCAAATCATCTTCCAAAA+GGG | + | chr3_4:57091418-57091437 | None:intergenic | 35.0% | |
| !! | CTTTTGGAAGATGATTTGGA+GGG | - | chr3_4:57091417-57091436 | Msa0508870:CDS | 35.0% |
| !!! | TGGGTTTTGGGAATTGTTTT+TGG | - | chr3_4:57091554-57091573 | Msa0508870:intron | 35.0% |
| !!! | GGGTTTTGGGAATTGTTTTT+GGG | - | chr3_4:57091555-57091574 | Msa0508870:intron | 35.0% |
| GAATTGAACATGATGGCAAT+GGG | - | chr3_4:57091781-57091800 | Msa0508870:CDS | 35.0% | |
| TTGTATTCCAACCTACATCA+TGG | - | chr3_4:57091849-57091868 | Msa0508870:intron | 35.0% | |
| TGTATTCCAACCTACATCAT+GGG | - | chr3_4:57091850-57091869 | Msa0508870:intron | 35.0% | |
| TTTCCAATTTCCCATGATGT+AGG | + | chr3_4:57091863-57091882 | None:intergenic | 35.0% | |
| ATAGGCATTATGCAATATGC+AGG | + | chr3_4:57091899-57091918 | None:intergenic | 35.0% | |
| ! | TTACAACCTTGGTGTATGTT+TGG | - | chr3_4:57091991-57092010 | Msa0508870:CDS | 35.0% |
| GTTTGGATCAAAGGGAAATA+AGG | - | chr3_4:57092082-57092101 | Msa0508870:CDS | 35.0% | |
| ! | CTGAAATGGGTTTGAAAATG+TGG | - | chr3_4:57092116-57092135 | Msa0508870:CDS | 35.0% |
| !! | TGTTTTTGAGCCTACATTGT+AGG | - | chr3_4:57092202-57092221 | Msa0508870:intron | 35.0% |
| ! | TAAAAGTTTGCATCGGTCAT+TGG | + | chr3_4:57092275-57092294 | None:intergenic | 35.0% |
| ! | CACAATGGATTTGATACGAT+AGG | - | chr3_4:57092350-57092369 | Msa0508870:CDS | 35.0% |
| TGTATGTTTGGATTTGATGG+GGG | + | chr3_4:57092444-57092463 | None:intergenic | 35.0% | |
| GTGTATGTTTGGATTTGATG+GGG | + | chr3_4:57092445-57092464 | None:intergenic | 35.0% | |
| ! | CTTTGTTTGGAAATTGGCTA+GGG | - | chr3_4:57092543-57092562 | Msa0508870:intron | 35.0% |
| AAAAAAGAGTTTGGGGGAAA+TGG | - | chr3_4:57092570-57092589 | Msa0508870:intron | 35.0% | |
| TTAGAAGGGAAAAGAGTGAA+GGG | + | chr3_4:57092664-57092683 | None:intergenic | 35.0% | |
| TTTAGAAGGGAAAAGAGTGA+AGG | + | chr3_4:57092665-57092684 | None:intergenic | 35.0% | |
| !! | GTTTTGGTCAAGCTTTTAGA+AGG | + | chr3_4:57092679-57092698 | None:intergenic | 35.0% |
| !! | GGATTTATAAGGGTATTGGA+GGG | + | chr3_4:57092889-57092908 | None:intergenic | 35.0% |
| ATTTCCACTACTTGTGAAGA+AGG | - | chr3_4:57093034-57093053 | Msa0508870:intron | 35.0% | |
| GTTTCGGTATCATAGTACAA+TGG | + | chr3_4:57093165-57093184 | None:intergenic | 35.0% | |
| TTGTACTATGATACCGAAAC+TGG | - | chr3_4:57093165-57093184 | Msa0508870:intron | 35.0% | |
| !! | GTGTTTTGAGTAACCAGTTT+CGG | + | chr3_4:57093181-57093200 | None:intergenic | 35.0% |
| GGAGCAACCAACTATAATTT+AGG | - | chr3_4:57093402-57093421 | Msa0508870:intron | 35.0% | |
| AATCACATTTCAGGAGAGAA+AGG | - | chr3_4:57093470-57093489 | Msa0508870:intron | 35.0% | |
| ATCACATTTCAGGAGAGAAA+GGG | - | chr3_4:57093471-57093490 | Msa0508870:intron | 35.0% | |
| GGAAGCCTCTTCATTATAAA+GGG | - | chr3_4:57093507-57093526 | Msa0508870:intron | 35.0% | |
| TGAAGCTTGGTATTATCCTA+TGG | + | chr3_4:57093541-57093560 | None:intergenic | 35.0% | |
| TAGGATAATACCAAGCTTCA+TGG | - | chr3_4:57093541-57093560 | Msa0508870:intron | 35.0% | |
| AGAGGTGGAGAATCAATTTA+TGG | - | chr3_4:57093596-57093615 | Msa0508870:intron | 35.0% | |
| GACAATCATTCAAAGGTGAA+AGG | + | chr3_4:57093765-57093784 | None:intergenic | 35.0% | |
| TTCACCTTTGAATGATTGTC+AGG | - | chr3_4:57093765-57093784 | Msa0508870:intron | 35.0% | |
| GTATCCTGACAATCATTCAA+AGG | + | chr3_4:57093772-57093791 | None:intergenic | 35.0% | |
| TATGAAAAACTGTGAGCCAT+TGG | + | chr3_4:57093823-57093842 | None:intergenic | 35.0% | |
| GATTCACCATGTGTAAACAA+TGG | + | chr3_4:57093929-57093948 | None:intergenic | 35.0% | |
| TACACATGGTGAATCATAGT+TGG | - | chr3_4:57093934-57093953 | Msa0508870:intron | 35.0% | |
| ATGGTGAATCATAGTTGGAA+AGG | - | chr3_4:57093939-57093958 | Msa0508870:intron | 35.0% | |
| CTTTAAATGCAGATGAGTGA+AGG | - | chr3_4:57094000-57094019 | Msa0508870:intron | 35.0% | |
| ! | ACATGCATCCATATGTTTTC+TGG | - | chr3_4:57094138-57094157 | Msa0508870:CDS | 35.0% |
| TTGTACAAGATTGAAGCAGA+AGG | - | chr3_4:57094216-57094235 | Msa0508870:intron | 35.0% | |
| AATATGACAACCGTACGTTT+GGG | + | chr3_4:57094258-57094277 | None:intergenic | 35.0% | |
| TAATATGACAACCGTACGTT+TGG | + | chr3_4:57094259-57094278 | None:intergenic | 35.0% | |
| ! | GAACAAAATTTGCGGATTAC+AGG | - | chr3_4:57094352-57094371 | Msa0508870:CDS | 35.0% |
| !! | CTAAATTGGTCTTGCTAAAG+GGG | - | chr3_4:57094424-57094443 | Msa0508870:CDS | 35.0% |
| ! | CTAAAGGGGAAAGGATTTTA+AGG | - | chr3_4:57094438-57094457 | Msa0508870:CDS | 35.0% |
| ATGTGTCAGCACACTTAGTT+AGG | + | chr3_4:57091063-57091082 | None:intergenic | 40.0% | |
| !! | CTCTGAACGCCATTTTCTTT+TGG | + | chr3_4:57091142-57091161 | None:intergenic | 40.0% |
| !!! | AGCAAGTGGAACACTGATTT+TGG | - | chr3_4:57091160-57091179 | Msa0508870:three_prime_UTR | 40.0% |
| CCTCCAAATCATCTTCCAAA+AGG | + | chr3_4:57091419-57091438 | None:intergenic | 40.0% | |
| !! | CCTTTTGGAAGATGATTTGG+AGG | - | chr3_4:57091416-57091435 | Msa0508870:CDS | 40.0% |
| AAGGTTTACATCATTCCCAG+AGG | + | chr3_4:57091698-57091717 | None:intergenic | 40.0% | |
| GGAATTGAACATGATGGCAA+TGG | - | chr3_4:57091780-57091799 | Msa0508870:CDS | 40.0% | |
| CAATTTCCCATGATGTAGGT+TGG | + | chr3_4:57091859-57091878 | None:intergenic | 40.0% | |
| CAACCTACATCATGGGAAAT+TGG | - | chr3_4:57091857-57091876 | Msa0508870:intron | 40.0% | |
| GGAACAAACTCTTACAACCT+TGG | - | chr3_4:57091980-57091999 | Msa0508870:CDS | 40.0% | |
| GGGTTTGAAAATGTGGCAAA+TGG | - | chr3_4:57092123-57092142 | Msa0508870:intron | 40.0% | |
| !! | AGGAGTACTTCCTACAATGT+AGG | + | chr3_4:57092215-57092234 | None:intergenic | 40.0% |
| !! | TGTAGGAAGTACTCCTAAGT+AGG | - | chr3_4:57092219-57092238 | Msa0508870:intron | 40.0% |
| ! | GGTACTTTAGGAACCTACTT+AGG | + | chr3_4:57092235-57092254 | None:intergenic | 40.0% |
| !! | AGTGTATGTTGGATTAGCAG+TGG | - | chr3_4:57092302-57092321 | Msa0508870:intron | 40.0% |
| TCCATTGTGATTTCGCACTA+CGG | + | chr3_4:57092339-57092358 | None:intergenic | 40.0% | |
| AGGCATCACAAAGCGATAAT+GGG | - | chr3_4:57092414-57092433 | Msa0508870:intron | 40.0% | |
| GGCAAGACTTAGTGTATGTT+TGG | + | chr3_4:57092456-57092475 | None:intergenic | 40.0% | |
| !! | GCTTTGTTTGGAAATTGGCT+AGG | - | chr3_4:57092542-57092561 | Msa0508870:intron | 40.0% |
| !! | GGGATTTATAAGGGTATTGG+AGG | + | chr3_4:57092890-57092909 | None:intergenic | 40.0% |
| ! | GAGGGGATTTATAAGGGTAT+TGG | + | chr3_4:57092893-57092912 | None:intergenic | 40.0% |
| GTTTGGGAGGGGATTTATAA+GGG | + | chr3_4:57092899-57092918 | None:intergenic | 40.0% | |
| TGTTTGGGAGGGGATTTATA+AGG | + | chr3_4:57092900-57092919 | None:intergenic | 40.0% | |
| CAACAGTTGAGAGTCTGTTT+GGG | + | chr3_4:57092915-57092934 | None:intergenic | 40.0% | |
| ACAACAGTTGAGAGTCTGTT+TGG | + | chr3_4:57092916-57092935 | None:intergenic | 40.0% | |
| TATGCCTTCTTCACAAGTAG+TGG | + | chr3_4:57093041-57093060 | None:intergenic | 40.0% | |
| ! | CATAGCATACCTGCAGTTTT+CGG | + | chr3_4:57093264-57093283 | None:intergenic | 40.0% |
| ! | CGGAAGTTTTCTGCACAAAA+GGG | + | chr3_4:57093350-57093369 | None:intergenic | 40.0% |
| ! | ACGGAAGTTTTCTGCACAAA+AGG | + | chr3_4:57093351-57093370 | None:intergenic | 40.0% |
| ! | CAGGTAGCTTTGCTTTGAAT+TGG | - | chr3_4:57093381-57093400 | Msa0508870:intron | 40.0% |
| TCACATTTCAGGAGAGAAAG+GGG | - | chr3_4:57093472-57093491 | Msa0508870:intron | 40.0% | |
| AGAAAGGGGTAGGAAAAAGT+GGG | - | chr3_4:57093486-57093505 | Msa0508870:intron | 40.0% | |
| GGGAAGCCTCTTCATTATAA+AGG | - | chr3_4:57093506-57093525 | Msa0508870:intron | 40.0% | |
| AATACCAAGCTTCATGGTTC+AGG | - | chr3_4:57093547-57093566 | Msa0508870:intron | 40.0% | |
| ATACCAAGCTTCATGGTTCA+GGG | - | chr3_4:57093548-57093567 | Msa0508870:intron | 40.0% | |
| AACTTCAAGCTGAAGCATAC+TGG | - | chr3_4:57093638-57093657 | Msa0508870:intron | 40.0% | |
| CAATAGCACATAATCTCACC+TGG | + | chr3_4:57093665-57093684 | None:intergenic | 40.0% | |
| TATGGATGGATACACATGCA+TGG | + | chr3_4:57093702-57093721 | None:intergenic | 40.0% | |
| AATTCTGGGCAAGATACCAA+TGG | - | chr3_4:57093804-57093823 | Msa0508870:intron | 40.0% | |
| ! | GCATCCATATGTTTTCTGGA+AGG | - | chr3_4:57094142-57094161 | Msa0508870:CDS | 40.0% |
| ACGGTTGTCATATTAGACAG+TGG | - | chr3_4:57094264-57094283 | Msa0508870:intron | 40.0% | |
| CGGTTGTCATATTAGACAGT+GGG | - | chr3_4:57094265-57094284 | Msa0508870:intron | 40.0% | |
| GGTTGTCATATTAGACAGTG+GGG | - | chr3_4:57094266-57094285 | Msa0508870:intron | 40.0% | |
| AAAATGGCGTTCAGAGCAAG+TGG | - | chr3_4:57091146-57091165 | Msa0508870:three_prime_UTR | 45.0% | |
| ! | TTTGGAGGGTGTGACCAAAA+AGG | - | chr3_4:57091431-57091450 | Msa0508870:CDS | 45.0% |
| TGTGATTTCGCACTACGGTT+TGG | + | chr3_4:57092334-57092353 | None:intergenic | 45.0% | |
| ACCGTAGTGCGAAATCACAA+TGG | - | chr3_4:57092335-57092354 | Msa0508870:intron | 45.0% | |
| CAGGCATCACAAAGCGATAA+TGG | - | chr3_4:57092413-57092432 | Msa0508870:intron | 45.0% | |
| AAAGAGTTTGGGGGAAATGG+AGG | - | chr3_4:57092573-57092592 | Msa0508870:intron | 45.0% | |
| AAGAGTTTGGGGGAAATGGA+GGG | - | chr3_4:57092574-57092593 | Msa0508870:intron | 45.0% | |
| GGAGGGAAAGAATGGAAGAA+TGG | - | chr3_4:57092596-57092615 | Msa0508870:intron | 45.0% | |
| CAAAACAAACCCTCGTGTCT+GGG | - | chr3_4:57092693-57092712 | Msa0508870:intron | 45.0% | |
| !! | TATAAGGGTATTGGAGGGCT+AGG | + | chr3_4:57092884-57092903 | None:intergenic | 45.0% |
| AGTTGAGAGTCTGTTTGGGA+GGG | + | chr3_4:57092911-57092930 | None:intergenic | 45.0% | |
| CAAAAAGGCCCATGACTATG+CGG | + | chr3_4:57093230-57093249 | None:intergenic | 45.0% | |
| ! | GCATAGTCATGGGCCTTTTT+GGG | - | chr3_4:57093229-57093248 | Msa0508870:intron | 45.0% |
| AACTTCCGTGCACTTTGTAC+AGG | - | chr3_4:57093362-57093381 | Msa0508870:intron | 45.0% | |
| AGCTACCTGTACAAAGTGCA+CGG | + | chr3_4:57093370-57093389 | None:intergenic | 45.0% | |
| ATTTCAGGAGAGAAAGGGGT+AGG | - | chr3_4:57093476-57093495 | Msa0508870:intron | 45.0% | |
| GAGAAAGGGGTAGGAAAAAG+TGG | - | chr3_4:57093485-57093504 | Msa0508870:intron | 45.0% | |
| GCGCTCCCTTTATAATGAAG+AGG | + | chr3_4:57093515-57093534 | None:intergenic | 45.0% | |
| ! | ATAAAGGGAGCGCATTCCAT+AGG | - | chr3_4:57093522-57093541 | Msa0508870:intron | 45.0% |
| CCAGCCTTCCAGAAAACATA+TGG | + | chr3_4:57094149-57094168 | None:intergenic | 45.0% | |
| !! | CCATATGTTTTCTGGAAGGC+TGG | - | chr3_4:57094146-57094165 | Msa0508870:CDS | 45.0% |
| !! | ATGTTTTCTGGAAGGCTGGA+TGG | - | chr3_4:57094150-57094169 | Msa0508870:CDS | 45.0% |
| GATGGACGCCATGTTGTATT+CGG | - | chr3_4:57094168-57094187 | Msa0508870:CDS | 45.0% | |
| GTACCTTGCCGAATACAACA+TGG | + | chr3_4:57094179-57094198 | None:intergenic | 45.0% | |
| ! | GTATTCGGCAAGGTACTTTC+TGG | - | chr3_4:57094183-57094202 | Msa0508870:CDS | 45.0% |
| GAAGCAGAAGGAAGTGAAAG+TGG | - | chr3_4:57094228-57094247 | Msa0508870:intron | 45.0% | |
| !! | TTGGTCTTGCTAAAGGGGAA+AGG | - | chr3_4:57094429-57094448 | Msa0508870:CDS | 45.0% |
| !! | TCAAAAAAAAAAAAAAAAAA+AGG | + | chr3_4:57091959-57091978 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+AGG | - | chr3_4:57091958-57091977 | Msa0508870:CDS | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTGA+GGG | - | chr3_4:57091959-57091978 | Msa0508870:CDS | 5.0% |
| AGAAAGCAATGGTTGCGCAG+AGG | + | chr3_4:57091208-57091227 | None:intergenic | 50.0% | |
| ! | TGTTCCATGAGGTACTCCTC+TGG | - | chr3_4:57091679-57091698 | Msa0508870:intron | 50.0% |
| ! | GTTCCATGAGGTACTCCTCT+GGG | - | chr3_4:57091680-57091699 | Msa0508870:intron | 50.0% |
| !! | ATTCCCAGAGGAGTACCTCA+TGG | + | chr3_4:57091686-57091705 | None:intergenic | 50.0% |
| TCAACAAAATCGCGGCACAC+AGG | - | chr3_4:57092394-57092413 | Msa0508870:intron | 50.0% | |
| AGAGTTTGGGGGAAATGGAG+GGG | - | chr3_4:57092575-57092594 | Msa0508870:intron | 50.0% | |
| AATGGAGGGGAGGGAAAGAA+TGG | - | chr3_4:57092588-57092607 | Msa0508870:intron | 50.0% | |
| !! | CCAGACACGAGGGTTTGTTT+TGG | + | chr3_4:57092695-57092714 | None:intergenic | 50.0% |
| CCAAAACAAACCCTCGTGTC+TGG | - | chr3_4:57092692-57092711 | Msa0508870:intron | 50.0% | |
| ! | TCTGGGAGGGAGATTTTGGA+GGG | - | chr3_4:57092710-57092729 | Msa0508870:intron | 50.0% |
| GTTGAGAGTCTGTTTGGGAG+GGG | + | chr3_4:57092910-57092929 | None:intergenic | 50.0% | |
| CAGTTGAGAGTCTGTTTGGG+AGG | + | chr3_4:57092912-57092931 | None:intergenic | 50.0% | |
| AGAAATTTGCGCTGCCAGCT+TGG | - | chr3_4:57092987-57093006 | Msa0508870:intron | 50.0% | |
| ! | TGCTTTAGGCCGCATAGTCA+TGG | - | chr3_4:57093218-57093237 | Msa0508870:intron | 50.0% |
| ! | GCTTTAGGCCGCATAGTCAT+GGG | - | chr3_4:57093219-57093238 | Msa0508870:intron | 50.0% |
| ! | CGCATAGTCATGGGCCTTTT+TGG | - | chr3_4:57093228-57093247 | Msa0508870:intron | 50.0% |
| TCGGTACTGTGGTCCCAAAA+AGG | + | chr3_4:57093245-57093264 | None:intergenic | 50.0% | |
| ! | ACCACAGTACCGAAAACTGC+AGG | - | chr3_4:57093252-57093271 | Msa0508870:intron | 50.0% |
| ! | ACCTGCAGTTTTCGGTACTG+TGG | + | chr3_4:57093256-57093275 | None:intergenic | 50.0% |
| GGTGATTTCACCAGTGGTGA+TGG | - | chr3_4:57093572-57093591 | Msa0508870:intron | 50.0% | |
| !! | TTCACCAGTGGTGATGGAAG+AGG | - | chr3_4:57093578-57093597 | Msa0508870:intron | 50.0% |
| AAGCTGAAGCATACTGGTCC+AGG | - | chr3_4:57093644-57093663 | Msa0508870:intron | 50.0% | |
| ACGCCATGTTGTATTCGGCA+AGG | - | chr3_4:57094173-57094192 | Msa0508870:CDS | 50.0% | |
| ! | CGGCAAGGTACTTTCTGGTA+TGG | - | chr3_4:57094188-57094207 | Msa0508870:CDS | 50.0% |
| AAGTGGCTCTCCCAAACGTA+CGG | - | chr3_4:57094245-57094264 | Msa0508870:intron | 50.0% | |
| TTGCCAAGCTAGCATCTCCC+TGG | - | chr3_4:57092471-57092490 | Msa0508870:intron | 55.0% | |
| TCTCCAGGGAGATGCTAGCT+TGG | + | chr3_4:57092477-57092496 | None:intergenic | 55.0% | |
| TTTGGGGGAAATGGAGGGGA+GGG | - | chr3_4:57092579-57092598 | Msa0508870:intron | 55.0% | |
| AACAAACCCTCGTGTCTGGG+AGG | - | chr3_4:57092696-57092715 | Msa0508870:intron | 55.0% | |
| ACAAACCCTCGTGTCTGGGA+GGG | - | chr3_4:57092697-57092716 | Msa0508870:intron | 55.0% | |
| AATCTCCCTCCCAGACACGA+GGG | + | chr3_4:57092705-57092724 | None:intergenic | 55.0% | |
| AAATCTCCCTCCCAGACACG+AGG | + | chr3_4:57092706-57092725 | None:intergenic | 55.0% | |
| ! | CGTGTCTGGGAGGGAGATTT+TGG | - | chr3_4:57092706-57092725 | Msa0508870:intron | 55.0% |
| ! | GTCTGGGAGGGAGATTTTGG+AGG | - | chr3_4:57092709-57092728 | Msa0508870:intron | 55.0% |
| !! | CTGGGAGGGAGATTTTGGAG+GGG | - | chr3_4:57092711-57092730 | Msa0508870:intron | 55.0% |
| !! | GAGGGAGATTTTGGAGGGGA+GGG | - | chr3_4:57092715-57092734 | Msa0508870:intron | 55.0% |
| AATTTGCGCTGCCAGCTTGG+CGG | - | chr3_4:57092990-57093009 | Msa0508870:intron | 55.0% | |
| CCACCCTGAACCATGAAGCT+TGG | + | chr3_4:57093554-57093573 | None:intergenic | 55.0% | |
| CCAAGCTTCATGGTTCAGGG+TGG | - | chr3_4:57093551-57093570 | Msa0508870:intron | 55.0% | |
| CAGGGTGGTGATTTCACCAG+TGG | - | chr3_4:57093566-57093585 | Msa0508870:intron | 55.0% | |
| !! | ACCAGTGGTGATGGAAGAGG+TGG | - | chr3_4:57093581-57093600 | Msa0508870:intron | 55.0% |
| TCCACCTCTTCCATCACCAC+TGG | + | chr3_4:57093585-57093604 | None:intergenic | 55.0% | |
| GTTTGGGGGAAATGGAGGGG+AGG | - | chr3_4:57092578-57092597 | Msa0508870:intron | 60.0% | |
| !! | GGAGGGAGATTTTGGAGGGG+AGG | - | chr3_4:57092714-57092733 | Msa0508870:intron | 60.0% |
| TGTGAGACATGCCGCCAAGC+TGG | + | chr3_4:57093004-57093023 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 57091042 | 57094580 | 57091042 | ID=Msa0508870;Name=Msa0508870 |
| chr3_4 | mRNA | 57091042 | 57094580 | 57091042 | ID=Msa0508870-mRNA-1;Parent=Msa0508870;Name=Msa0508870-mRNA-1;_AED=0.11;_eAED=0.11;_QI=107|1|1|1|1|1|7|275|234 |
| chr3_4 | exon | 57091042 | 57091458 | 57091042 | ID=Msa0508870-mRNA-1:exon:13020;Parent=Msa0508870-mRNA-1 |
| chr3_4 | exon | 57091760 | 57091835 | 57091760 | ID=Msa0508870-mRNA-1:exon:13019;Parent=Msa0508870-mRNA-1 |
| chr3_4 | exon | 57091957 | 57092139 | 57091957 | ID=Msa0508870-mRNA-1:exon:13018;Parent=Msa0508870-mRNA-1 |
| chr3_4 | exon | 57092239 | 57092262 | 57092239 | ID=Msa0508870-mRNA-1:exon:13017;Parent=Msa0508870-mRNA-1 |
| chr3_4 | exon | 57092349 | 57092396 | 57092349 | ID=Msa0508870-mRNA-1:exon:13016;Parent=Msa0508870-mRNA-1 |
| chr3_4 | exon | 57094133 | 57094211 | 57094133 | ID=Msa0508870-mRNA-1:exon:13015;Parent=Msa0508870-mRNA-1 |
| chr3_4 | exon | 57094321 | 57094580 | 57094321 | ID=Msa0508870-mRNA-1:exon:13014;Parent=Msa0508870-mRNA-1 |
| chr3_4 | five_prime_UTR | 57094474 | 57094580 | 57094474 | ID=Msa0508870-mRNA-1:five_prime_utr;Parent=Msa0508870-mRNA-1 |
| chr3_4 | CDS | 57094321 | 57094473 | 57094321 | ID=Msa0508870-mRNA-1:cds;Parent=Msa0508870-mRNA-1 |
| chr3_4 | CDS | 57094133 | 57094211 | 57094133 | ID=Msa0508870-mRNA-1:cds;Parent=Msa0508870-mRNA-1 |
| chr3_4 | CDS | 57092349 | 57092396 | 57092349 | ID=Msa0508870-mRNA-1:cds;Parent=Msa0508870-mRNA-1 |
| chr3_4 | CDS | 57092239 | 57092262 | 57092239 | ID=Msa0508870-mRNA-1:cds;Parent=Msa0508870-mRNA-1 |
| chr3_4 | CDS | 57091957 | 57092139 | 57091957 | ID=Msa0508870-mRNA-1:cds;Parent=Msa0508870-mRNA-1 |
| chr3_4 | CDS | 57091760 | 57091835 | 57091760 | ID=Msa0508870-mRNA-1:cds;Parent=Msa0508870-mRNA-1 |
| chr3_4 | CDS | 57091317 | 57091458 | 57091317 | ID=Msa0508870-mRNA-1:cds;Parent=Msa0508870-mRNA-1 |
| chr3_4 | three_prime_UTR | 57091042 | 57091316 | 57091042 | ID=Msa0508870-mRNA-1:three_prime_utr;Parent=Msa0508870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
