Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058660 | XP_003623305.1 | 99.492 | 394 | 2 | 0 | 1 | 394 | 1 | 394 | 0.0 | 802 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058660 | sp|M1CZC0|EBP1_SOLTU | 87.824 | 386 | 46 | 1 | 1 | 385 | 1 | 386 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058660 | G7KSA2 | 99.492 | 394 | 2 | 0 | 1 | 394 | 1 | 394 | 0.0 | 802 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1012740 | Msa1058660 | 0.808894 | 2.474994e-50 | -8.615850e-47 |
| Msa1012770 | Msa1058660 | 0.817267 | 3.603847e-52 | -8.615850e-47 |
| Msa1058660 | Msa1094380 | 0.805818 | 1.110829e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058660 | MtrunA17_Chr7g0242891 | 99.492 | 394 | 2 | 0 | 1 | 394 | 1 | 394 | 0.0 | 802 |
| Msa1058660 | MtrunA17_Chr2g0316491 | 85.787 | 394 | 51 | 1 | 1 | 394 | 1 | 389 | 0.0 | 672 |
| Msa1058660 | MtrunA17_Chr1g0206751 | 25.602 | 332 | 213 | 8 | 7 | 323 | 20 | 332 | 4.58e-29 | 115 |
| Msa1058660 | MtrunA17_Chr4g0061151 | 25.602 | 332 | 213 | 8 | 7 | 323 | 101 | 413 | 1.23e-28 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058660 | AT3G51800.3 | 77.635 | 389 | 79 | 2 | 2 | 390 | 3 | 383 | 0.0 | 605 |
| Msa1058660 | AT3G51800.1 | 78.663 | 389 | 82 | 1 | 2 | 390 | 3 | 390 | 0.0 | 593 |
| Msa1058660 | AT3G51800.2 | 76.884 | 398 | 82 | 2 | 2 | 390 | 3 | 399 | 0.0 | 584 |
| Msa1058660 | AT2G44180.1 | 25.225 | 333 | 213 | 9 | 7 | 323 | 117 | 429 | 1.91e-28 | 116 |
| Msa1058660 | AT3G59990.4 | 25.904 | 332 | 212 | 8 | 7 | 323 | 115 | 427 | 2.04e-28 | 115 |
| Msa1058660 | AT3G59990.3 | 25.904 | 332 | 212 | 8 | 7 | 323 | 115 | 427 | 2.04e-28 | 115 |
| Msa1058660 | AT3G59990.1 | 25.904 | 332 | 212 | 8 | 7 | 323 | 115 | 427 | 2.04e-28 | 115 |
| Msa1058660 | AT3G59990.2 | 25.904 | 332 | 212 | 8 | 7 | 323 | 115 | 427 | 2.04e-28 | 115 |
| Msa1058660 | AT2G44180.2 | 25.466 | 322 | 204 | 9 | 18 | 323 | 8 | 309 | 3.09e-27 | 110 |
Find 105 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTTGCAGCCTAAGTTAT+TGG | 0.168042 | 7_2:+43723828 | Msa1058660:intron |
| TCTGACACCCCTTTCAGTTT+TGG | 0.255511 | 7_2:+43724746 | Msa1058660:three_prime_UTR |
| GGCTTTGAAGTTAGTTATTT+CGG | 0.260686 | 7_2:+43720406 | Msa1058660:CDS |
| AGGGTTTGTGAAGTGAAATT+AGG | 0.262873 | 7_2:-43719736 | None:intergenic |
| ACCAAAATTCATATCCAAAA+AGG | 0.288538 | 7_2:-43724790 | None:intergenic |
| CTTCAGGAAGGTCCGGTTAC+TGG | 0.308248 | 7_2:+43721130 | Msa1058660:CDS |
| TTCATTGAAGAGGCAAGTTT+TGG | 0.310911 | 7_2:-43719711 | None:intergenic |
| CAATTGATTACCTTCTTTCC+TGG | 0.318576 | 7_2:-43721217 | None:intergenic |
| TTTCAATGGTTGCAGTGATT+TGG | 0.324960 | 7_2:+43721060 | Msa1058660:intron |
| AATGAAGAGTAAGGAAGAAA+TGG | 0.327536 | 7_2:-43719786 | None:intergenic |
| GATTTGGCTTGTCATATAGA+TGG | 0.329871 | 7_2:+43721076 | Msa1058660:CDS |
| GGCTCATACTCATGTTCTTC+AGG | 0.343280 | 7_2:+43721114 | Msa1058660:CDS |
| GGGTTTGTGAAGTGAAATTA+GGG | 0.343381 | 7_2:-43719735 | None:intergenic |
| TAGAGTTACCTAGCAGAAAA+TGG | 0.347063 | 7_2:-43723961 | None:intergenic |
| CTAGCAGAAAATGGCATGAT+TGG | 0.364270 | 7_2:-43723952 | None:intergenic |
| AACAGAGAAATTGTTATGCT+TGG | 0.377382 | 7_2:+43724869 | Msa1058660:three_prime_UTR |
| AATTAAGTTCAACTATTGTA+TGG | 0.382802 | 7_2:-43724932 | None:intergenic |
| AAGAGCTCGCCTTGGTTTAG+TGG | 0.392978 | 7_2:+43724081 | Msa1058660:CDS |
| TCCTGGCCTTACAAGCCTTA+AGG | 0.393010 | 7_2:-43721200 | None:intergenic |
| ACACTCTTATTATAGGGCTT+TGG | 0.396279 | 7_2:+43724051 | Msa1058660:intron |
| GCCTCATTTGTTGAGTCCAC+TGG | 0.400790 | 7_2:-43724655 | None:intergenic |
| TTGTATTTGGTTACAACATC+AGG | 0.403550 | 7_2:-43719995 | None:intergenic |
| GTTGTCGACATTTGCGAGAA+AGG | 0.407425 | 7_2:+43720449 | Msa1058660:CDS |
| TCTGCTGCCCGTCCAGTAAC+CGG | 0.409183 | 7_2:-43721142 | None:intergenic |
| CTCTTATTATAGGGCTTTGG+AGG | 0.414338 | 7_2:+43724054 | Msa1058660:intron |
| AGGTTGCCTTAAGGCTTGTA+AGG | 0.421762 | 7_2:+43721194 | Msa1058660:CDS |
| TGTGTTGTTAACAGAAATAC+AGG | 0.425225 | 7_2:-43720897 | None:intergenic |
| ATGTCGACAACCTTGGCCTT+CGG | 0.440220 | 7_2:-43720437 | None:intergenic |
| AGCAGACAACTATTTATAAG+AGG | 0.448471 | 7_2:+43723857 | Msa1058660:CDS |
| GGTTGATGATGCAGAGTTTG+AGG | 0.452257 | 7_2:+43723683 | Msa1058660:CDS |
| CGATCACAAACTGCTTCAAT+TGG | 0.458421 | 7_2:-43723617 | None:intergenic |
| ACGGTCTTGTTAATGCCAAA+TGG | 0.460902 | 7_2:+43724276 | Msa1058660:CDS |
| GGCTAGCCATGCCTTGATCT+CGG | 0.460904 | 7_2:-43724361 | None:intergenic |
| GCATCATCAACCCTTGTATC+CGG | 0.463945 | 7_2:-43723672 | None:intergenic |
| ATTGATATAGTGACAAGTAC+TGG | 0.464133 | 7_2:+43723723 | Msa1058660:CDS |
| TGTACTTAGTATCTCTAATC+CGG | 0.469904 | 7_2:+43723653 | Msa1058660:CDS |
| GTATCTCTAATCCGGATACA+AGG | 0.471369 | 7_2:+43723661 | Msa1058660:CDS |
| CTGCTGCTGAGGTTGCCTTA+AGG | 0.471559 | 7_2:+43721185 | Msa1058660:CDS |
| ATGAAGAGTAAGGAAGAAAT+GGG | 0.473147 | 7_2:-43719785 | None:intergenic |
| GCTAGCCATGCCTTGATCTC+GGG | 0.479085 | 7_2:-43724360 | None:intergenic |
| TGTTGCACACATCAAATTCA+CGG | 0.479497 | 7_2:+43724257 | Msa1058660:CDS |
| CTCGCAAATGTCGACAACCT+TGG | 0.479959 | 7_2:-43720444 | None:intergenic |
| TCACAAACTGCTTCAATTGG+TGG | 0.483001 | 7_2:-43723614 | None:intergenic |
| TGAAAGGGAGGAGAAGGAGT+TGG | 0.485440 | 7_2:+43719961 | Msa1058660:CDS |
| GTGACGCGGTCTGATCCATT+TGG | 0.486491 | 7_2:-43724291 | None:intergenic |
| GATCAAGGCATGGCTAGCCT+TGG | 0.487132 | 7_2:+43724365 | Msa1058660:CDS |
| GCCTTAAGGCTTGTAAGGCC+AGG | 0.487319 | 7_2:+43721199 | Msa1058660:CDS |
| AACAAATGAGGCCACATCTC+AGG | 0.488049 | 7_2:+43724666 | Msa1058660:CDS |
| ATTTGGCTTGTCATATAGAT+GGG | 0.489793 | 7_2:+43721077 | Msa1058660:CDS |
| GGATGATGAAAGGGAGGAGA+AGG | 0.490206 | 7_2:+43719955 | Msa1058660:CDS |
| TCATGTTCTTCAGGAAGGTC+CGG | 0.491438 | 7_2:+43721123 | Msa1058660:CDS |
| GGAAGGTCCGGTTACTGGAC+GGG | 0.495529 | 7_2:+43721135 | Msa1058660:CDS |
| TGTATCTGATGCAATTCAAA+AGG | 0.498979 | 7_2:+43723548 | Msa1058660:CDS |
| GCTTGTAAGGCCAGGAAAGA+AGG | 0.499294 | 7_2:+43721207 | Msa1058660:CDS |
| GATAGATGATCCCGAGATCA+AGG | 0.503858 | 7_2:+43724350 | Msa1058660:CDS |
| ATCAAGGCATGGCTAGCCTT+GGG | 0.514968 | 7_2:+43724366 | Msa1058660:CDS |
| CACCATGTCGGATGATGAAA+GGG | 0.519119 | 7_2:+43719946 | Msa1058660:exon |
| CCTGTTCTGCATGAAAAGCC+TGG | 0.520705 | 7_2:+43724136 | Msa1058660:CDS |
| GGCAAAGATTCGAAGAAATG+AGG | 0.521603 | 7_2:-43719756 | None:intergenic |
| GGCTGCAAACACTGCTGCTG+AGG | 0.522569 | 7_2:+43721174 | Msa1058660:CDS |
| CACTGGCTAGAGGAGAGAAA+TGG | 0.524226 | 7_2:-43720925 | None:intergenic |
| ACAATGTACCAAAACTGAAA+GGG | 0.525017 | 7_2:-43724754 | None:intergenic |
| GATGAGACAGTGTTGGAAGA+AGG | 0.526469 | 7_2:+43720947 | Msa1058660:CDS |
| GACAGCAGAAGCTGAGCCAG+TGG | 0.530153 | 7_2:+43724639 | Msa1058660:CDS |
| GCACCATGTCGGATGATGAA+AGG | 0.530984 | 7_2:+43719945 | Msa1058660:exon |
| GTCAATTCATTCCTGAGATG+TGG | 0.541149 | 7_2:-43724677 | None:intergenic |
| CTCCCTTTCATCATCCGACA+TGG | 0.542242 | 7_2:-43719948 | None:intergenic |
| AACAATGTACCAAAACTGAA+AGG | 0.547449 | 7_2:-43724755 | None:intergenic |
| TTCCAACACTGTCTCATCAC+TGG | 0.549888 | 7_2:-43720942 | None:intergenic |
| TGTTAACAGAAATACAGGTC+GGG | 0.556626 | 7_2:-43720892 | None:intergenic |
| AAATTAGGGTTTCATTGAAG+AGG | 0.558818 | 7_2:-43719721 | None:intergenic |
| GACAAGTACTGGAGAAGGCA+AGG | 0.561868 | 7_2:+43723734 | Msa1058660:CDS |
| GTGAAGAAGAAGATAGAGAG+AGG | 0.562003 | 7_2:+43720860 | Msa1058660:CDS |
| GTGGGCTGCAATTCTTGGAG+TGG | 0.565750 | 7_2:-43724321 | None:intergenic |
| TGCCTATAATTGTAAAATTG+TGG | 0.568963 | 7_2:+43723578 | Msa1058660:CDS |
| AGATGGGTTCATTGCTGCTG+TGG | 0.571546 | 7_2:+43721093 | Msa1058660:CDS |
| GAGGAGAAAAGAGCTCGCCT+TGG | 0.572936 | 7_2:+43724073 | Msa1058660:CDS |
| GCAAAGATTCGAAGAAATGA+GGG | 0.577017 | 7_2:-43719755 | None:intergenic |
| AGCCAGTGATGAGACAGTGT+TGG | 0.577721 | 7_2:+43720940 | Msa1058660:CDS |
| TTGAAGCAGTTTGTGATCGA+CGG | 0.579073 | 7_2:+43723621 | Msa1058660:CDS |
| GTTTGTGATCGACGGTAACA+AGG | 0.579225 | 7_2:+43723629 | Msa1058660:CDS |
| AAAACAAAGAAGAAAGGTGG+CGG | 0.579537 | 7_2:+43724393 | Msa1058660:CDS |
| AGGAAGGTCCGGTTACTGGA+CGG | 0.589047 | 7_2:+43721134 | Msa1058660:CDS |
| GCAGACAACTATTTATAAGA+GGG | 0.589806 | 7_2:+43723858 | Msa1058660:CDS |
| CATACTCATGTTCTTCAGGA+AGG | 0.594553 | 7_2:+43721118 | Msa1058660:CDS |
| GCCAGTGGACTCAACAAATG+AGG | 0.599556 | 7_2:+43724654 | Msa1058660:CDS |
| ATAGTGACAAGTACTGGAGA+AGG | 0.607460 | 7_2:+43723729 | Msa1058660:CDS |
| TTGTTAACAGAAATACAGGT+CGG | 0.613871 | 7_2:-43720893 | None:intergenic |
| TTCAGGTAAGAAAGAAGACA+AGG | 0.616167 | 7_2:+43724609 | Msa1058660:intron |
| CAATGTACCAAAACTGAAAG+GGG | 0.625114 | 7_2:-43724753 | None:intergenic |
| GGAATGTAAACCGAAGGCCA+AGG | 0.630468 | 7_2:+43720427 | Msa1058660:CDS |
| TATTTCGGAATGTAAACCGA+AGG | 0.632205 | 7_2:+43720421 | Msa1058660:CDS |
| CTATAATTGTAAAATTGTGG+AGG | 0.633611 | 7_2:+43723581 | Msa1058660:CDS |
| ACTTGAAGATGAAAGCATCT+CGG | 0.634545 | 7_2:+43723899 | Msa1058660:CDS |
| TATCTCTAATCCGGATACAA+GGG | 0.635855 | 7_2:+43723662 | Msa1058660:CDS |
| TGCTTCTCATCCAATAACTT+AGG | 0.637623 | 7_2:-43723838 | None:intergenic |
| CATCAAGGATTGAACAAGTG+AGG | 0.646955 | 7_2:+43719923 | Msa1058660:five_prime_UTR |
| ACTGTCTCATCACTGGCTAG+AGG | 0.660835 | 7_2:-43720935 | None:intergenic |
| TATAATTGTAAAATTGTGGA+GGG | 0.663342 | 7_2:+43723582 | Msa1058660:CDS |
| CATGTCGGATGATGAAAGGG+AGG | 0.672723 | 7_2:+43719949 | Msa1058660:exon |
| ATGATCCCGAGATCAAGGCA+TGG | 0.688022 | 7_2:+43724355 | Msa1058660:CDS |
| GAACAAGTGAGGCACCATGT+CGG | 0.693904 | 7_2:+43719934 | Msa1058660:exon |
| TCATACATTCCACTAAACCA+AGG | 0.697995 | 7_2:-43724090 | None:intergenic |
| ACGGGCAGCAGATGTCATTG+CGG | 0.708638 | 7_2:+43721153 | Msa1058660:CDS |
| GGAGTGGATGAGATGTGACG+CGG | 0.799241 | 7_2:-43724305 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATATTCATATTCTATA+TGG | + | chr7_2:43720065-43720084 | Msa1058660:intron | 10.0% |
| !! | TTTATATTCATATTCTATAT+GGG | + | chr7_2:43720066-43720085 | Msa1058660:intron | 10.0% |
| !!! | TTGTTAATTTTACTTATTTT+TGG | + | chr7_2:43720188-43720207 | Msa1058660:intron | 10.0% |
| !!! | TTACTTTTTACTTATTTTTT+TGG | + | chr7_2:43720365-43720384 | Msa1058660:intron | 10.0% |
| !! | ATAATAATACATATAAATGA+GGG | - | chr7_2:43721253-43721272 | None:intergenic | 10.0% |
| !! | TATAATAATACATATAAATG+AGG | - | chr7_2:43721254-43721273 | None:intergenic | 10.0% |
| !! | AATTAATATTGAAAAATGAA+GGG | - | chr7_2:43721965-43721984 | None:intergenic | 10.0% |
| !! | TAATTAATATTGAAAAATGA+AGG | - | chr7_2:43721966-43721985 | None:intergenic | 10.0% |
| !! | GTAAAAAAAAAAAAAAATGT+TGG | - | chr7_2:43722292-43722311 | None:intergenic | 10.0% |
| !!! | TCAAATCAATTTTTTTTTTA+AGG | - | chr7_2:43722334-43722353 | None:intergenic | 10.0% |
| !!! | GATTAAATATTTTAACATAA+AGG | + | chr7_2:43722539-43722558 | Msa1058660:intron | 10.0% |
| !! | ATATGATAAAAATGTAATAT+TGG | + | chr7_2:43722600-43722619 | Msa1058660:intron | 10.0% |
| !! | ATATCATAAAACATTAATAT+TGG | + | chr7_2:43723255-43723274 | Msa1058660:intron | 10.0% |
| !!! | TTTTGTTTGAATTTTTCATT+TGG | + | chr7_2:43719888-43719907 | Msa1058660:intron | 15.0% |
| !!! | TTTGTTTGAATTTTTCATTT+GGG | + | chr7_2:43719889-43719908 | Msa1058660:intron | 15.0% |
| !!! | GTTTTTGTTAATTCATAAAT+TGG | + | chr7_2:43720088-43720107 | Msa1058660:intron | 15.0% |
| !!! | AAATTTATTGAATTTAGCTT+AGG | + | chr7_2:43720117-43720136 | Msa1058660:intron | 15.0% |
| !!! | TTTTGTTAATTTTCATTTCT+CGG | + | chr7_2:43720149-43720168 | Msa1058660:intron | 15.0% |
| !! | GTATAAAGAAATATTGTATT+TGG | + | chr7_2:43720718-43720737 | Msa1058660:intron | 15.0% |
| !! | TTTACTTTATAACATATTTG+TGG | + | chr7_2:43721759-43721778 | Msa1058660:intron | 15.0% |
| !!! | TTTTATCATATATAAGTATC+AGG | - | chr7_2:43722591-43722610 | None:intergenic | 15.0% |
| !! | ATGTCATCATATTTAAAAAA+GGG | - | chr7_2:43723191-43723210 | None:intergenic | 15.0% |
| !! | TATTAGTTCAATAATTCATA+TGG | - | chr7_2:43723801-43723820 | None:intergenic | 15.0% |
| !!! | ATGAAAAACATTTCTTTTTT+GGG | - | chr7_2:43724718-43724737 | None:intergenic | 15.0% |
| !!! | AATGAAAAACATTTCTTTTT+TGG | - | chr7_2:43724719-43724738 | None:intergenic | 15.0% |
| !! | AAAAATGAAAATGAAGAGTA+AGG | - | chr7_2:43719798-43719817 | None:intergenic | 20.0% |
| !!! | TTTTATTTGCAAATTCGAAA+TGG | + | chr7_2:43720227-43720246 | Msa1058660:intron | 20.0% |
| !! | TTTATTTGCAAATTCGAAAT+GGG | + | chr7_2:43720228-43720247 | Msa1058660:intron | 20.0% |
| !!! | TTAATTTCTCGATTAGTTTA+AGG | + | chr7_2:43720298-43720317 | Msa1058660:intron | 20.0% |
| !!! | CTTATGATGTTTTCTTTTAT+TGG | + | chr7_2:43720805-43720824 | Msa1058660:intron | 20.0% |
| !! | AGTAGAATAAAATGTACAAA+AGG | - | chr7_2:43721633-43721652 | None:intergenic | 20.0% |
| !!! | TTTTATCATATGTAAGTATC+AGG | - | chr7_2:43722036-43722055 | None:intergenic | 20.0% |
| !! | ATATGATAAAACTGTACTAT+TGG | + | chr7_2:43722045-43722064 | Msa1058660:intron | 20.0% |
| !! | AGTAAAATACCAAAATATGT+TGG | - | chr7_2:43722750-43722769 | None:intergenic | 20.0% |
| !! | CATGTCATCATATTTAAAAA+AGG | - | chr7_2:43723192-43723211 | None:intergenic | 20.0% |
| !! | TATAATTGTAAAATTGTGGA+GGG | + | chr7_2:43723582-43723601 | Msa1058660:CDS | 20.0% |
| !! | TACAATTACACTCTTATTAT+AGG | + | chr7_2:43724044-43724063 | Msa1058660:intron | 20.0% |
| !! | ACAATTACACTCTTATTATA+GGG | + | chr7_2:43724045-43724064 | Msa1058660:intron | 20.0% |
| !!! | TTCACTAAATTATACCTTTT+TGG | + | chr7_2:43724776-43724795 | Msa1058660:three_prime_UTR | 20.0% |
| ! | GTATCAAAACAATGAAGAAT+TGG | - | chr7_2:43719838-43719857 | None:intergenic | 25.0% |
| !! | AATCAAATTTTTCCCCAATT+GGG | - | chr7_2:43719860-43719879 | None:intergenic | 25.0% |
| !! | AAATCAAATTTTTCCCCAAT+TGG | - | chr7_2:43719861-43719880 | None:intergenic | 25.0% |
| !!! | ATTTTTCATTTGGGTTTTTC+AGG | + | chr7_2:43719898-43719917 | Msa1058660:intron | 25.0% |
| ! | TCAATATTTAGATTCTGTGA+AGG | + | chr7_2:43720605-43720624 | Msa1058660:intron | 25.0% |
| ! | TAATGATGCATTTCTTTCAA+TGG | + | chr7_2:43721046-43721065 | Msa1058660:intron | 25.0% |
| !! | GTTTGAAGTCAATTCAAATA+TGG | + | chr7_2:43721324-43721343 | Msa1058660:intron | 25.0% |
| !!! | CAAATATGGCACTTTAAAAT+TGG | + | chr7_2:43721338-43721357 | Msa1058660:intron | 25.0% |
| ! | TTTAGAGATCAAAATTCACA+AGG | - | chr7_2:43721411-43721430 | None:intergenic | 25.0% |
| !!! | CAAAATAAGACAGTTTTGAT+AGG | - | chr7_2:43721736-43721755 | None:intergenic | 25.0% |
| !!! | CTATCAAAACTGTCTTATTT+TGG | + | chr7_2:43721734-43721753 | Msa1058660:intron | 25.0% |
| ! | CTATATTATGAATACGTCAT+AGG | + | chr7_2:43721804-43721823 | Msa1058660:intron | 25.0% |
| ! | AATGTAACTATGACAAAAAC+AGG | - | chr7_2:43721851-43721870 | None:intergenic | 25.0% |
| !! | TTTTGTCATAGTTACATTGA+TGG | + | chr7_2:43721853-43721872 | Msa1058660:intron | 25.0% |
| !!! | AGCTTTATCTTTTGTCTATT+TGG | + | chr7_2:43722000-43722019 | Msa1058660:intron | 25.0% |
| ! | AGATTAAATATGATGACATG+AGG | + | chr7_2:43722983-43723002 | Msa1058660:intron | 25.0% |
| ! | GATTAAATATGATGACATGA+GGG | + | chr7_2:43722984-43723003 | Msa1058660:intron | 25.0% |
| ! | ATTAAATATGATGACATGAG+GGG | + | chr7_2:43722985-43723004 | Msa1058660:intron | 25.0% |
| ! | CATATTTAAAAAAGGGCAAA+GGG | - | chr7_2:43723184-43723203 | None:intergenic | 25.0% |
| ! | TCATATTTAAAAAAGGGCAA+AGG | - | chr7_2:43723185-43723204 | None:intergenic | 25.0% |
| ! | GTTTAAATATTGTACCATGT+TGG | - | chr7_2:43723402-43723421 | None:intergenic | 25.0% |
| ! | TGCCTATAATTGTAAAATTG+TGG | + | chr7_2:43723578-43723597 | Msa1058660:CDS | 25.0% |
| !! | CTCCACAATTTTACAATTAT+AGG | - | chr7_2:43723583-43723602 | None:intergenic | 25.0% |
| ! | CTATAATTGTAAAATTGTGG+AGG | + | chr7_2:43723581-43723600 | Msa1058660:CDS | 25.0% |
| ! | AGTGGACATATAATCAAAAT+CGG | - | chr7_2:43724024-43724043 | None:intergenic | 25.0% |
| !! | AATAAGAGTGTAATTGTAAG+TGG | - | chr7_2:43724042-43724061 | None:intergenic | 25.0% |
| !! | ACCTTTTTGGATATGAATTT+TGG | + | chr7_2:43724789-43724808 | Msa1058660:three_prime_UTR | 25.0% |
| ! | ACCAAAATTCATATCCAAAA+AGG | - | chr7_2:43724793-43724812 | None:intergenic | 25.0% |
| AAATTAGGGTTTCATTGAAG+AGG | - | chr7_2:43719724-43719743 | None:intergenic | 30.0% | |
| ATGAAGAGTAAGGAAGAAAT+GGG | - | chr7_2:43719788-43719807 | None:intergenic | 30.0% | |
| AATGAAGAGTAAGGAAGAAA+TGG | - | chr7_2:43719789-43719808 | None:intergenic | 30.0% | |
| !!! | TCATTGTTTTGATACCCAAT+TGG | + | chr7_2:43719843-43719862 | Msa1058660:intron | 30.0% |
| !!! | CATTGTTTTGATACCCAATT+GGG | + | chr7_2:43719844-43719863 | Msa1058660:intron | 30.0% |
| !!! | ATTGTTTTGATACCCAATTG+GGG | + | chr7_2:43719845-43719864 | Msa1058660:intron | 30.0% |
| TTGTATTTGGTTACAACATC+AGG | - | chr7_2:43719998-43720017 | None:intergenic | 30.0% | |
| !! | TTCATTTCTCGGTTAGTTTA+AGG | + | chr7_2:43720160-43720179 | Msa1058660:intron | 30.0% |
| !! | GGCTTTGAAGTTAGTTATTT+CGG | + | chr7_2:43720406-43720425 | Msa1058660:CDS | 30.0% |
| ! | GTTTTCTTTTATTGGTGTGA+AGG | + | chr7_2:43720813-43720832 | Msa1058660:intron | 30.0% |
| TTGTTAACAGAAATACAGGT+CGG | - | chr7_2:43720896-43720915 | None:intergenic | 30.0% | |
| ! | TGTGTTGTTAACAGAAATAC+AGG | - | chr7_2:43720900-43720919 | None:intergenic | 30.0% |
| !! | ATTTGGCTTGTCATATAGAT+GGG | + | chr7_2:43721077-43721096 | Msa1058660:CDS | 30.0% |
| ATGAAAACTAATCATGAGCT+AGG | + | chr7_2:43721433-43721452 | Msa1058660:intron | 30.0% | |
| ATCATATGTGGTTAAATGGT+TGG | - | chr7_2:43721533-43721552 | None:intergenic | 30.0% | |
| AGACATCATATGTGGTTAAA+TGG | - | chr7_2:43721537-43721556 | None:intergenic | 30.0% | |
| TTGATAGGAACTGAAAAACT+GGG | - | chr7_2:43721721-43721740 | None:intergenic | 30.0% | |
| TTTGATAGGAACTGAAAAAC+TGG | - | chr7_2:43721722-43721741 | None:intergenic | 30.0% | |
| AAATTGCTTGAAGTATGACA+AGG | - | chr7_2:43721938-43721957 | None:intergenic | 30.0% | |
| ATATGTAAGTATCAGGATTC+AGG | - | chr7_2:43722029-43722048 | None:intergenic | 30.0% | |
| !! | CAATATGATTTTGATCACCT+CGG | - | chr7_2:43722079-43722098 | None:intergenic | 30.0% |
| CTATATGATGACTACATCAT+AGG | + | chr7_2:43722365-43722384 | Msa1058660:intron | 30.0% | |
| AGTGTAACTATGACATAAAC+AGG | - | chr7_2:43722413-43722432 | None:intergenic | 30.0% | |
| TTATGTCATAGTTACACTGA+TGG | + | chr7_2:43722415-43722434 | Msa1058660:intron | 30.0% | |
| AGTGGGTATTTATGAAACAA+AGG | - | chr7_2:43722453-43722472 | None:intergenic | 30.0% | |
| GAAATAAGAAACACAACCAA+AGG | - | chr7_2:43722478-43722497 | None:intergenic | 30.0% | |
| ATTGTACATCAGTGTAACTA+AGG | - | chr7_2:43722500-43722519 | None:intergenic | 30.0% | |
| CTATATGATGAATACATCGT+CGG | + | chr7_2:43722807-43722826 | Msa1058660:intron | 30.0% | |
| AGTGTAACTATGACATAAAC+AGG | - | chr7_2:43722413-43722432 | None:intergenic | 30.0% | |
| AGTGGGTAATTATGAAACAA+AGG | - | chr7_2:43722895-43722914 | None:intergenic | 30.0% | |
| CAATAGAAAACACAACCAAT+GGG | - | chr7_2:43722919-43722938 | None:intergenic | 30.0% | |
| TCAATAGAAAACACAACCAA+TGG | - | chr7_2:43722920-43722939 | None:intergenic | 30.0% | |
| AACCTCTTGTGTAAAATAAC+AGG | + | chr7_2:43723076-43723095 | Msa1058660:intron | 30.0% | |
| ACCTCTTGTGTAAAATAACA+GGG | + | chr7_2:43723077-43723096 | Msa1058660:intron | 30.0% | |
| TTGTGTAAAATAACAGGGTA+AGG | + | chr7_2:43723082-43723101 | Msa1058660:intron | 30.0% | |
| TACAATACACCAATAATGGT+GGG | + | chr7_2:43723110-43723129 | Msa1058660:intron | 30.0% | |
| !! | ATTTTCTAGTATAGCCAACA+TGG | + | chr7_2:43723385-43723404 | Msa1058660:intron | 30.0% |
| AAATTTCCTGAGTTGTAGTA+GGG | + | chr7_2:43723484-43723503 | Msa1058660:intron | 30.0% | |
| ! | ATACTTTTCTTGACAGAACA+AGG | + | chr7_2:43723524-43723543 | Msa1058660:intron | 30.0% |
| TGTATCTGATGCAATTCAAA+AGG | + | chr7_2:43723548-43723567 | Msa1058660:CDS | 30.0% | |
| TGTACTTAGTATCTCTAATC+CGG | + | chr7_2:43723653-43723672 | Msa1058660:CDS | 30.0% | |
| ATTGATATAGTGACAAGTAC+TGG | + | chr7_2:43723723-43723742 | Msa1058660:CDS | 30.0% | |
| AGCAGACAACTATTTATAAG+AGG | + | chr7_2:43723857-43723876 | Msa1058660:CDS | 30.0% | |
| GCAGACAACTATTTATAAGA+GGG | + | chr7_2:43723858-43723877 | Msa1058660:CDS | 30.0% | |
| ! | ATGGCATGATTGGAAATTTT+TGG | - | chr7_2:43723945-43723964 | None:intergenic | 30.0% |
| ! | AAGCCTGGTAATTTTTCTAT+AGG | + | chr7_2:43724151-43724170 | Msa1058660:intron | 30.0% |
| TTGCCTATAGAAAAATTACC+AGG | - | chr7_2:43724157-43724176 | None:intergenic | 30.0% | |
| AACAGTATAGCAAGAAGTTT+AGG | - | chr7_2:43724220-43724239 | None:intergenic | 30.0% | |
| ACAAAAACAAAGAAGAAAGG+TGG | + | chr7_2:43724390-43724409 | Msa1058660:CDS | 30.0% | |
| TAAATACAAAAGCGACATGA+TGG | - | chr7_2:43724502-43724521 | None:intergenic | 30.0% | |
| !! | TTTATGCTTTCTGAAATGCA+TGG | + | chr7_2:43724518-43724537 | Msa1058660:intron | 30.0% |
| ! | TGCATATGATGGAATACTTT+AGG | + | chr7_2:43724545-43724564 | Msa1058660:intron | 30.0% |
| !!! | GATGCTTTTTGTTTTTGTTC+AGG | + | chr7_2:43724592-43724611 | Msa1058660:intron | 30.0% |
| !!! | CATTTCTTTTTTGGGATTGA+GGG | - | chr7_2:43724710-43724729 | None:intergenic | 30.0% |
| !!! | ACATTTCTTTTTTGGGATTG+AGG | - | chr7_2:43724711-43724730 | None:intergenic | 30.0% |
| ACAATGTACCAAAACTGAAA+GGG | - | chr7_2:43724757-43724776 | None:intergenic | 30.0% | |
| AACAATGTACCAAAACTGAA+AGG | - | chr7_2:43724758-43724777 | None:intergenic | 30.0% | |
| AACAGAGAAATTGTTATGCT+TGG | + | chr7_2:43724869-43724888 | Msa1058660:three_prime_UTR | 30.0% | |
| !!! | AGGCAAGTTTTGGCTTATAT+AGG | - | chr7_2:43719704-43719723 | None:intergenic | 35.0% |
| ! | TTCATTGAAGAGGCAAGTTT+TGG | - | chr7_2:43719714-43719733 | None:intergenic | 35.0% |
| GGGTTTGTGAAGTGAAATTA+GGG | - | chr7_2:43719738-43719757 | None:intergenic | 35.0% | |
| AGGGTTTGTGAAGTGAAATT+AGG | - | chr7_2:43719739-43719758 | None:intergenic | 35.0% | |
| GCAAAGATTCGAAGAAATGA+GGG | - | chr7_2:43719758-43719777 | None:intergenic | 35.0% | |
| !! | TAAGGAAGAAATGGGTTTTG+CGG | - | chr7_2:43719780-43719799 | None:intergenic | 35.0% |
| !! | TGGATTTGTTTGTTATGCAG+AGG | + | chr7_2:43720385-43720404 | Msa1058660:intron | 35.0% |
| TATTTCGGAATGTAAACCGA+AGG | + | chr7_2:43720421-43720440 | Msa1058660:CDS | 35.0% | |
| TGTTAACAGAAATACAGGTC+GGG | - | chr7_2:43720895-43720914 | None:intergenic | 35.0% | |
| TTTCAATGGTTGCAGTGATT+TGG | + | chr7_2:43721060-43721079 | Msa1058660:intron | 35.0% | |
| !! | GATTTGGCTTGTCATATAGA+TGG | + | chr7_2:43721076-43721095 | Msa1058660:CDS | 35.0% |
| CAATTGATTACCTTCTTTCC+TGG | - | chr7_2:43721220-43721239 | None:intergenic | 35.0% | |
| ATATTGCTCCACATGTAGAT+AGG | + | chr7_2:43721302-43721321 | Msa1058660:intron | 35.0% | |
| ACTTCAAACCTATCTACATG+TGG | - | chr7_2:43721313-43721332 | None:intergenic | 35.0% | |
| ! | ACTTTGTTTGTTGCATCTGA+AGG | + | chr7_2:43721375-43721394 | Msa1058660:intron | 35.0% |
| ! | CTTTGTTTGTTGCATCTGAA+GGG | + | chr7_2:43721376-43721395 | Msa1058660:intron | 35.0% |
| GATCAAAATTCACAAGGCAA+AGG | - | chr7_2:43721405-43721424 | None:intergenic | 35.0% | |
| AGCTAGGATAAAATCCAATG+AGG | + | chr7_2:43721449-43721468 | Msa1058660:intron | 35.0% | |
| CTATGACAATAAAGCCTCAT+TGG | - | chr7_2:43721466-43721485 | None:intergenic | 35.0% | |
| TGTCATAGTTACACTGATAG+AGG | + | chr7_2:43721478-43721497 | Msa1058660:intron | 35.0% | |
| ACAAGCAAAGACATCATATG+TGG | - | chr7_2:43721545-43721564 | None:intergenic | 35.0% | |
| TGATAGGAACTGAAAAACTG+GGG | - | chr7_2:43721720-43721739 | None:intergenic | 35.0% | |
| TTATGAATACGTCATAGGCT+AGG | + | chr7_2:43721809-43721828 | Msa1058660:intron | 35.0% | |
| ATGACAAAAACAGGCTTCAT+TGG | - | chr7_2:43721842-43721861 | None:intergenic | 35.0% | |
| ATGACATAAACAGGCTTCAT+TGG | - | chr7_2:43722404-43722423 | None:intergenic | 35.0% | |
| CATAAATACCCACTTTCCTT+TGG | + | chr7_2:43722459-43722478 | Msa1058660:intron | 35.0% | |
| AAACACAACCAAAGGAAAGT+GGG | - | chr7_2:43722470-43722489 | None:intergenic | 35.0% | |
| !!! | CAATATGGTTTTGATCACCT+CGG | - | chr7_2:43722634-43722653 | None:intergenic | 35.0% |
| GGAAAAAGAGGAAACCAATA+TGG | - | chr7_2:43722649-43722668 | None:intergenic | 35.0% | |
| ATGACATAAACAGGCTTCAT+TGG | - | chr7_2:43722404-43722423 | None:intergenic | 35.0% | |
| !!! | ACCCTGTTATTTTACACAAG+AGG | - | chr7_2:43723081-43723100 | None:intergenic | 35.0% |
| TGCGTACAATACACCAATAA+TGG | + | chr7_2:43723106-43723125 | Msa1058660:intron | 35.0% | |
| GTACAATACACCAATAATGG+TGG | + | chr7_2:43723109-43723128 | Msa1058660:intron | 35.0% | |
| CAATATGGTTATGATCACCT+CGG | - | chr7_2:43723289-43723308 | None:intergenic | 35.0% | |
| GGAAAAAGAGGAAACCAATA+TGG | - | chr7_2:43722649-43722668 | None:intergenic | 35.0% | |
| CAAATTTCCTGAGTTGTAGT+AGG | + | chr7_2:43723483-43723502 | Msa1058660:intron | 35.0% | |
| TATCTCTAATCCGGATACAA+GGG | + | chr7_2:43723662-43723681 | Msa1058660:CDS | 35.0% | |
| TGCTTCTCATCCAATAACTT+AGG | - | chr7_2:43723841-43723860 | None:intergenic | 35.0% | |
| !! | ACTTGAAGATGAAAGCATCT+CGG | + | chr7_2:43723899-43723918 | Msa1058660:CDS | 35.0% |
| TAGAGTTACCTAGCAGAAAA+TGG | - | chr7_2:43723964-43723983 | None:intergenic | 35.0% | |
| ACACTCTTATTATAGGGCTT+TGG | + | chr7_2:43724051-43724070 | Msa1058660:intron | 35.0% | |
| TCATACATTCCACTAAACCA+AGG | - | chr7_2:43724093-43724112 | None:intergenic | 35.0% | |
| ! | TTTTCATGCAGAACAGGATA+TGG | - | chr7_2:43724133-43724152 | None:intergenic | 35.0% |
| AACATGAACAGTTCCACAAT+TGG | + | chr7_2:43724178-43724197 | Msa1058660:intron | 35.0% | |
| ACATGAACAGTTCCACAATT+GGG | + | chr7_2:43724179-43724198 | Msa1058660:intron | 35.0% | |
| TGCTATACTGTTTCCTTATC+AGG | + | chr7_2:43724228-43724247 | Msa1058660:intron | 35.0% | |
| TGCAACAAAATCACCTGATA+AGG | - | chr7_2:43724244-43724263 | None:intergenic | 35.0% | |
| TGTTGCACACATCAAATTCA+CGG | + | chr7_2:43724257-43724276 | Msa1058660:CDS | 35.0% | |
| !! | GGATCATCTATCGTTTTTGT+GGG | - | chr7_2:43724342-43724361 | None:intergenic | 35.0% |
| GGCACAAAAACAAAGAAGAA+AGG | + | chr7_2:43724387-43724406 | Msa1058660:CDS | 35.0% | |
| AAAACAAAGAAGAAAGGTGG+CGG | + | chr7_2:43724393-43724412 | Msa1058660:CDS | 35.0% | |
| AAGAAGAAAAAAGGTAGGCT+TGG | + | chr7_2:43724417-43724436 | Msa1058660:intron | 35.0% | |
| ! | CGACATGATGGAACAAAAAT+AGG | - | chr7_2:43724490-43724509 | None:intergenic | 35.0% |
| TGCATGGAATTTGCATATGA+TGG | + | chr7_2:43724534-43724553 | Msa1058660:intron | 35.0% | |
| TTCAGGTAAGAAAGAAGACA+AGG | + | chr7_2:43724609-43724628 | Msa1058660:intron | 35.0% | |
| CAATGTACCAAAACTGAAAG+GGG | - | chr7_2:43724756-43724775 | None:intergenic | 35.0% | |
| GGCAAAGATTCGAAGAAATG+AGG | - | chr7_2:43719759-43719778 | None:intergenic | 40.0% | |
| CATCAAGGATTGAACAAGTG+AGG | + | chr7_2:43719923-43719942 | Msa1058660:five_prime_UTR | 40.0% | |
| !! | CTCAGCTGCAGTTTTGTATT+TGG | - | chr7_2:43720011-43720030 | None:intergenic | 40.0% |
| GTGAAGAAGAAGATAGAGAG+AGG | + | chr7_2:43720860-43720879 | Msa1058660:CDS | 40.0% | |
| !!! | CTAGTTTTGTGATTACCCTG+TGG | + | chr7_2:43720999-43721018 | Msa1058660:intron | 40.0% |
| TTGTGATTACCCTGTGGTTT+CGG | + | chr7_2:43721005-43721024 | Msa1058660:intron | 40.0% | |
| AAATGATAGCCGAAACCACA+GGG | - | chr7_2:43721017-43721036 | None:intergenic | 40.0% | |
| CATACTCATGTTCTTCAGGA+AGG | + | chr7_2:43721118-43721137 | Msa1058660:CDS | 40.0% | |
| ACACTGATAGAGGTCATTTG+TGG | + | chr7_2:43721488-43721507 | Msa1058660:intron | 40.0% | |
| AATAAATACCCATATCCCCG+TGG | + | chr7_2:43721897-43721916 | Msa1058660:intron | 40.0% | |
| GATGACTACATCATAGGCTA+TGG | + | chr7_2:43722371-43722390 | Msa1058660:intron | 40.0% | |
| GAAACACAACCAAAGGAAAG+TGG | - | chr7_2:43722471-43722490 | None:intergenic | 40.0% | |
| TAATATTGGCAACTTTGCCG+AGG | + | chr7_2:43722614-43722633 | Msa1058660:intron | 40.0% | |
| CGAGGTGATCAAAACCATAT+TGG | + | chr7_2:43722632-43722651 | Msa1058660:intron | 40.0% | |
| ! | TTTTGGCAACAGGGAAAAAG+AGG | - | chr7_2:43722661-43722680 | None:intergenic | 40.0% |
| !! | CCATTCAAGTTTTGGCAACA+GGG | - | chr7_2:43722670-43722689 | None:intergenic | 40.0% |
| !! | AGTTCCAGCCATTCAAGTTT+TGG | - | chr7_2:43722678-43722697 | None:intergenic | 40.0% |
| ! | CTAGTGCAGCCAACATATTT+TGG | + | chr7_2:43722738-43722757 | Msa1058660:intron | 40.0% |
| CATAATTACCCACTTCCCAT+TGG | + | chr7_2:43722901-43722920 | Msa1058660:intron | 40.0% | |
| AAACACAACCAATGGGAAGT+GGG | - | chr7_2:43722912-43722931 | None:intergenic | 40.0% | |
| AAAACACAACCAATGGGAAG+TGG | - | chr7_2:43722913-43722932 | None:intergenic | 40.0% | |
| AAAAACCTTGAAGCACGACA+AGG | - | chr7_2:43722943-43722962 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr7_2:43723030-43723049 | Msa1058660:intron | 40.0% | |
| ! | TTACACAAGAGGTTGTTTCC+AGG | - | chr7_2:43723070-43723089 | None:intergenic | 40.0% |
| TAATATTGGCAACTTTGCCG+AGG | + | chr7_2:43722614-43722633 | Msa1058660:intron | 40.0% | |
| CGAGGTGATCATAACCATAT+TGG | + | chr7_2:43723287-43723306 | Msa1058660:intron | 40.0% | |
| ! | AGTTCCAGCCATTCAAGTTT+CGG | - | chr7_2:43722678-43722697 | None:intergenic | 40.0% |
| AATACACCCTACTACAACTC+AGG | - | chr7_2:43723493-43723512 | None:intergenic | 40.0% | |
| TCACAAACTGCTTCAATTGG+TGG | - | chr7_2:43723617-43723636 | None:intergenic | 40.0% | |
| CGATCACAAACTGCTTCAAT+TGG | - | chr7_2:43723620-43723639 | None:intergenic | 40.0% | |
| TTGAAGCAGTTTGTGATCGA+CGG | + | chr7_2:43723621-43723640 | Msa1058660:CDS | 40.0% | |
| GTATCTCTAATCCGGATACA+AGG | + | chr7_2:43723661-43723680 | Msa1058660:CDS | 40.0% | |
| !! | ATAGTGACAAGTACTGGAGA+AGG | + | chr7_2:43723729-43723748 | Msa1058660:CDS | 40.0% |
| TCCAATAACTTAGGCTGCAA+GGG | - | chr7_2:43723832-43723851 | None:intergenic | 40.0% | |
| ATCCAATAACTTAGGCTGCA+AGG | - | chr7_2:43723833-43723852 | None:intergenic | 40.0% | |
| CTAGCAGAAAATGGCATGAT+TGG | - | chr7_2:43723955-43723974 | None:intergenic | 40.0% | |
| !!! | CAATCATGCCATTTTCTGCT+AGG | + | chr7_2:43723953-43723972 | Msa1058660:CDS | 40.0% |
| ! | CTCTTATTATAGGGCTTTGG+AGG | + | chr7_2:43724054-43724073 | Msa1058660:intron | 40.0% |
| !! | ACGGTCTTGTTAATGCCAAA+TGG | + | chr7_2:43724276-43724295 | Msa1058660:CDS | 40.0% |
| !! | TTTTTGTGGGCTGCAATTCT+TGG | - | chr7_2:43724329-43724348 | None:intergenic | 40.0% |
| !! | GGGATCATCTATCGTTTTTG+TGG | - | chr7_2:43724343-43724362 | None:intergenic | 40.0% |
| !!! | CTTCTTTGTTTTTGTGCCCA+AGG | - | chr7_2:43724385-43724404 | None:intergenic | 40.0% |
| GCGGAAAGAAGAAAAAAGGT+AGG | + | chr7_2:43724412-43724431 | Msa1058660:intron | 40.0% | |
| GTCAATTCATTCCTGAGATG+TGG | - | chr7_2:43724680-43724699 | None:intergenic | 40.0% | |
| !!! | TTTTTTGGGATTGAGGGTGA+GGG | - | chr7_2:43724704-43724723 | None:intergenic | 40.0% |
| !!! | TGGGTTTTTCAGGAGCATCA+AGG | + | chr7_2:43719908-43719927 | Msa1058660:intron | 45.0% |
| CACCATGTCGGATGATGAAA+GGG | + | chr7_2:43719946-43719965 | Msa1058660:exon | 45.0% | |
| GTTGTCGACATTTGCGAGAA+AGG | + | chr7_2:43720449-43720468 | Msa1058660:CDS | 45.0% | |
| AACTAGTATCCTCTCACGTG+CGG | + | chr7_2:43720510-43720529 | Msa1058660:intron | 45.0% | |
| TTCCAACACTGTCTCATCAC+TGG | - | chr7_2:43720945-43720964 | None:intergenic | 45.0% | |
| ! | GATGAGACAGTGTTGGAAGA+AGG | + | chr7_2:43720947-43720966 | Msa1058660:CDS | 45.0% |
| CAAATGATAGCCGAAACCAC+AGG | - | chr7_2:43721018-43721037 | None:intergenic | 45.0% | |
| GGCTCATACTCATGTTCTTC+AGG | + | chr7_2:43721114-43721133 | Msa1058660:CDS | 45.0% | |
| TCATGTTCTTCAGGAAGGTC+CGG | + | chr7_2:43721123-43721142 | Msa1058660:CDS | 45.0% | |
| AGGTTGCCTTAAGGCTTGTA+AGG | + | chr7_2:43721194-43721213 | Msa1058660:CDS | 45.0% | |
| ATGTGGTTAAATGGTTGGCG+CGG | - | chr7_2:43721528-43721547 | None:intergenic | 45.0% | |
| CTACACATTTCAGCTGAGAG+AGG | - | chr7_2:43721568-43721587 | None:intergenic | 45.0% | |
| TCAATAAAGACGCAACCACG+GGG | - | chr7_2:43721915-43721934 | None:intergenic | 45.0% | |
| GTCAATAAAGACGCAACCAC+GGG | - | chr7_2:43721916-43721935 | None:intergenic | 45.0% | |
| GGTCAATAAAGACGCAACCA+CGG | - | chr7_2:43721917-43721936 | None:intergenic | 45.0% | |
| TACTATTGGCAACTTTGCCG+AGG | + | chr7_2:43722059-43722078 | Msa1058660:intron | 45.0% | |
| TTTCGGCAACAGGGAAAAAG+AGG | - | chr7_2:43722106-43722125 | None:intergenic | 45.0% | |
| ! | CCATTCAAGTTTCGGCAACA+GGG | - | chr7_2:43722115-43722134 | None:intergenic | 45.0% |
| TTGCCGAAACTTGAATGGCT+GGG | + | chr7_2:43722117-43722136 | Msa1058660:intron | 45.0% | |
| ! | AGTCCCAGCCATTCAAGTTT+CGG | - | chr7_2:43722123-43722142 | None:intergenic | 45.0% |
| CCCTGTTGCCAAAACTTGAA+TGG | + | chr7_2:43722667-43722686 | Msa1058660:intron | 45.0% | |
| !! | GCCATTCAAGTTTTGGCAAC+AGG | - | chr7_2:43722671-43722690 | None:intergenic | 45.0% |
| GTTGCCAAAACTTGAATGGC+TGG | + | chr7_2:43722671-43722690 | Msa1058660:intron | 45.0% | |
| ! | GATGAATACATCGTCGGCTA+TGG | + | chr7_2:43722813-43722832 | Msa1058660:intron | 45.0% |
| ATTGACCTTGTCGTGCTTCA+AGG | + | chr7_2:43722935-43722954 | Msa1058660:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr7_2:43723036-43723055 | Msa1058660:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr7_2:43723037-43723056 | Msa1058660:intron | 45.0% | |
| TTTCGGCAACAGGGAAAAAG+AGG | - | chr7_2:43722106-43722125 | None:intergenic | 45.0% | |
| ! | CCATTCAAGTTTCGGCAACA+GGG | - | chr7_2:43722115-43722134 | None:intergenic | 45.0% |
| GAAACTTGAATGGCTGGAAC+TGG | + | chr7_2:43723332-43723351 | Msa1058660:intron | 45.0% | |
| GTTTGTGATCGACGGTAACA+AGG | + | chr7_2:43723629-43723648 | Msa1058660:CDS | 45.0% | |
| TCCCTTGCAGCCTAAGTTAT+TGG | + | chr7_2:43723828-43723847 | Msa1058660:intron | 45.0% | |
| GTAGGAACACAACCCAATTG+TGG | - | chr7_2:43724194-43724213 | None:intergenic | 45.0% | |
| AGCAAGAAGTTTAGGCTCGT+AGG | - | chr7_2:43724212-43724231 | None:intergenic | 45.0% | |
| GATAGATGATCCCGAGATCA+AGG | + | chr7_2:43724350-43724369 | Msa1058660:CDS | 45.0% | |
| !! | GGTGGCGGAAAGAAGAAAAA+AGG | + | chr7_2:43724408-43724427 | Msa1058660:CDS | 45.0% |
| AACAAATGAGGCCACATCTC+AGG | + | chr7_2:43724666-43724685 | Msa1058660:CDS | 45.0% | |
| !!! | CTTTTTTGGGATTGAGGGTG+AGG | - | chr7_2:43724705-43724724 | None:intergenic | 45.0% |
| ! | TCTGACACCCCTTTCAGTTT+TGG | + | chr7_2:43724746-43724765 | Msa1058660:three_prime_UTR | 45.0% |
| !!! | TTTTGTTAATATTATTTAAA+TGG | + | chr7_2:43720775-43720794 | Msa1058660:intron | 5.0% |
| ! | GAACAAGTGAGGCACCATGT+CGG | + | chr7_2:43719934-43719953 | Msa1058660:exon | 50.0% |
| GCACCATGTCGGATGATGAA+AGG | + | chr7_2:43719945-43719964 | Msa1058660:exon | 50.0% | |
| CTCCCTTTCATCATCCGACA+TGG | - | chr7_2:43719951-43719970 | None:intergenic | 50.0% | |
| CATGTCGGATGATGAAAGGG+AGG | + | chr7_2:43719949-43719968 | Msa1058660:exon | 50.0% | |
| GGATGATGAAAGGGAGGAGA+AGG | + | chr7_2:43719955-43719974 | Msa1058660:CDS | 50.0% | |
| TGAAAGGGAGGAGAAGGAGT+TGG | + | chr7_2:43719961-43719980 | Msa1058660:CDS | 50.0% | |
| GGAATGTAAACCGAAGGCCA+AGG | + | chr7_2:43720427-43720446 | Msa1058660:CDS | 50.0% | |
| ! | ATGTCGACAACCTTGGCCTT+CGG | - | chr7_2:43720440-43720459 | None:intergenic | 50.0% |
| CTCGCAAATGTCGACAACCT+TGG | - | chr7_2:43720447-43720466 | None:intergenic | 50.0% | |
| TAATGTATGCCGCACGTGAG+AGG | - | chr7_2:43720522-43720541 | None:intergenic | 50.0% | |
| ! | CACTGGCTAGAGGAGAGAAA+TGG | - | chr7_2:43720928-43720947 | None:intergenic | 50.0% |
| ! | ACTGTCTCATCACTGGCTAG+AGG | - | chr7_2:43720938-43720957 | None:intergenic | 50.0% |
| AGCCAGTGATGAGACAGTGT+TGG | + | chr7_2:43720940-43720959 | Msa1058660:CDS | 50.0% | |
| ! | AGATGGGTTCATTGCTGCTG+TGG | + | chr7_2:43721093-43721112 | Msa1058660:CDS | 50.0% |
| !! | TCCTGGCCTTACAAGCCTTA+AGG | - | chr7_2:43721203-43721222 | None:intergenic | 50.0% |
| GCTTGTAAGGCCAGGAAAGA+AGG | + | chr7_2:43721207-43721226 | Msa1058660:CDS | 50.0% | |
| CCCTGTTGCCGAAACTTGAA+TGG | + | chr7_2:43722112-43722131 | Msa1058660:intron | 50.0% | |
| ! | GCCATTCAAGTTTCGGCAAC+AGG | - | chr7_2:43722116-43722135 | None:intergenic | 50.0% |
| GTTGCCGAAACTTGAATGGC+TGG | + | chr7_2:43722116-43722135 | Msa1058660:intron | 50.0% | |
| GATGACATGAGGGGTAACCT+TGG | + | chr7_2:43722994-43723013 | Msa1058660:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr7_2:43723014-43723033 | None:intergenic | 50.0% | |
| AAAAAGGGCAAAGGGCAACC+CGG | - | chr7_2:43723176-43723195 | None:intergenic | 50.0% | |
| CCCTGTTGCCGAAACTTGAA+TGG | + | chr7_2:43722112-43722131 | Msa1058660:intron | 50.0% | |
| ! | GCCATTCAAGTTTCGGCAAC+AGG | - | chr7_2:43722116-43722135 | None:intergenic | 50.0% |
| GTTGCCGAAACTTGAATGGC+TGG | + | chr7_2:43722116-43722135 | Msa1058660:intron | 50.0% | |
| !! | GACAAGTACTGGAGAAGGCA+AGG | + | chr7_2:43723734-43723753 | Msa1058660:CDS | 50.0% |
| ! | AGTACTGGAGAAGGCAAGGT+AGG | + | chr7_2:43723738-43723757 | Msa1058660:intron | 50.0% |
| AAGAGCTCGCCTTGGTTTAG+TGG | + | chr7_2:43724081-43724100 | Msa1058660:CDS | 50.0% | |
| ! | CCAGGCTTTTCATGCAGAAC+AGG | - | chr7_2:43724139-43724158 | None:intergenic | 50.0% |
| CCTGTTCTGCATGAAAAGCC+TGG | + | chr7_2:43724136-43724155 | Msa1058660:CDS | 50.0% | |
| ATGATCCCGAGATCAAGGCA+TGG | + | chr7_2:43724355-43724374 | Msa1058660:CDS | 50.0% | |
| !! | ATCAAGGCATGGCTAGCCTT+GGG | + | chr7_2:43724366-43724385 | Msa1058660:CDS | 50.0% |
| ! | GCCAGTGGACTCAACAAATG+AGG | + | chr7_2:43724654-43724673 | Msa1058660:CDS | 50.0% |
| ! | GCCTCATTTGTTGAGTCCAC+TGG | - | chr7_2:43724658-43724677 | None:intergenic | 50.0% |
| CTTCAGGAAGGTCCGGTTAC+TGG | + | chr7_2:43721130-43721149 | Msa1058660:CDS | 55.0% | |
| AGGAAGGTCCGGTTACTGGA+CGG | + | chr7_2:43721134-43721153 | Msa1058660:CDS | 55.0% | |
| ACGGGCAGCAGATGTCATTG+CGG | + | chr7_2:43721153-43721172 | Msa1058660:CDS | 55.0% | |
| CTGCTGCTGAGGTTGCCTTA+AGG | + | chr7_2:43721185-43721204 | Msa1058660:CDS | 55.0% | |
| GCCTTAAGGCTTGTAAGGCC+AGG | + | chr7_2:43721199-43721218 | Msa1058660:CDS | 55.0% | |
| AGACGCAACCACGGGGATAT+GGG | - | chr7_2:43721908-43721927 | None:intergenic | 55.0% | |
| AAGACGCAACCACGGGGATA+TGG | - | chr7_2:43721909-43721928 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr7_2:43723049-43723068 | Msa1058660:intron | 55.0% | |
| GGAAGGGGTCCCACCATTAT+TGG | - | chr7_2:43723122-43723141 | None:intergenic | 55.0% | |
| ! | ATAATGGTGGGACCCCTTCC+CGG | + | chr7_2:43723122-43723141 | Msa1058660:intron | 55.0% |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr7_2:43723149-43723168 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr7_2:43723150-43723169 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr7_2:43723154-43723173 | Msa1058660:intron | 55.0% |
| GAGGAGAAAAGAGCTCGCCT+TGG | + | chr7_2:43724073-43724092 | Msa1058660:CDS | 55.0% | |
| GTGACGCGGTCTGATCCATT+TGG | - | chr7_2:43724294-43724313 | None:intergenic | 55.0% | |
| GGAGTGGATGAGATGTGACG+CGG | - | chr7_2:43724308-43724327 | None:intergenic | 55.0% | |
| ! | GTGGGCTGCAATTCTTGGAG+TGG | - | chr7_2:43724324-43724343 | None:intergenic | 55.0% |
| GCTAGCCATGCCTTGATCTC+GGG | - | chr7_2:43724363-43724382 | None:intergenic | 55.0% | |
| ! | GGCTAGCCATGCCTTGATCT+CGG | - | chr7_2:43724364-43724383 | None:intergenic | 55.0% |
| !! | GATCAAGGCATGGCTAGCCT+TGG | + | chr7_2:43724365-43724384 | Msa1058660:CDS | 55.0% |
| GGAAGGTCCGGTTACTGGAC+GGG | + | chr7_2:43721135-43721154 | Msa1058660:CDS | 60.0% | |
| TCTGCTGCCCGTCCAGTAAC+CGG | - | chr7_2:43721145-43721164 | None:intergenic | 60.0% | |
| GGCTGCAAACACTGCTGCTG+AGG | + | chr7_2:43721174-43721193 | Msa1058660:CDS | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr7_2:43723003-43723022 | Msa1058660:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr7_2:43723155-43723174 | Msa1058660:intron | 60.0% |
| GACAGCAGAAGCTGAGCCAG+TGG | + | chr7_2:43724639-43724658 | Msa1058660:CDS | 60.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr7_2:43723137-43723156 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr7_2:43723138-43723157 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr7_2:43723137-43723156 | Msa1058660:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr7_2:43723138-43723157 | Msa1058660:intron | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr7_2:43723139-43723158 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr7_2:43723143-43723162 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr7_2:43723144-43723163 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 43719687 | 43724945 | 43719687 | ID=Msa1058660;Name=Msa1058660 |
| chr7_2 | mRNA | 43719687 | 43724945 | 43719687 | ID=Msa1058660-mRNA-1;Parent=Msa1058660;Name=Msa1058660-mRNA-1;_AED=0.04;_eAED=0.04;_QI=166|1|1|1|0.88|0.8|10|252|394 |
| chr7_2 | exon | 43719687 | 43719822 | 43719687 | ID=Msa1058660-mRNA-1:exon:7877;Parent=Msa1058660-mRNA-1 |
| chr7_2 | exon | 43719920 | 43720040 | 43719920 | ID=Msa1058660-mRNA-1:exon:7878;Parent=Msa1058660-mRNA-1 |
| chr7_2 | exon | 43720405 | 43720489 | 43720405 | ID=Msa1058660-mRNA-1:exon:7879;Parent=Msa1058660-mRNA-1 |
| chr7_2 | exon | 43720835 | 43720984 | 43720835 | ID=Msa1058660-mRNA-1:exon:7880;Parent=Msa1058660-mRNA-1 |
| chr7_2 | exon | 43721075 | 43721228 | 43721075 | ID=Msa1058660-mRNA-1:exon:7881;Parent=Msa1058660-mRNA-1 |
| chr7_2 | exon | 43723540 | 43723755 | 43723540 | ID=Msa1058660-mRNA-1:exon:7882;Parent=Msa1058660-mRNA-1 |
| chr7_2 | exon | 43723838 | 43723974 | 43723838 | ID=Msa1058660-mRNA-1:exon:7883;Parent=Msa1058660-mRNA-1 |
| chr7_2 | exon | 43724066 | 43724157 | 43724066 | ID=Msa1058660-mRNA-1:exon:7884;Parent=Msa1058660-mRNA-1 |
| chr7_2 | exon | 43724250 | 43724429 | 43724250 | ID=Msa1058660-mRNA-1:exon:7885;Parent=Msa1058660-mRNA-1 |
| chr7_2 | exon | 43724614 | 43724945 | 43724614 | ID=Msa1058660-mRNA-1:exon:7886;Parent=Msa1058660-mRNA-1 |
| chr7_2 | five_prime_UTR | 43719687 | 43719822 | 43719687 | ID=Msa1058660-mRNA-1:five_prime_utr;Parent=Msa1058660-mRNA-1 |
| chr7_2 | five_prime_UTR | 43719920 | 43719949 | 43719920 | ID=Msa1058660-mRNA-1:five_prime_utr;Parent=Msa1058660-mRNA-1 |
| chr7_2 | CDS | 43719950 | 43720040 | 43719950 | ID=Msa1058660-mRNA-1:cds;Parent=Msa1058660-mRNA-1 |
| chr7_2 | CDS | 43720405 | 43720489 | 43720405 | ID=Msa1058660-mRNA-1:cds;Parent=Msa1058660-mRNA-1 |
| chr7_2 | CDS | 43720835 | 43720984 | 43720835 | ID=Msa1058660-mRNA-1:cds;Parent=Msa1058660-mRNA-1 |
| chr7_2 | CDS | 43721075 | 43721228 | 43721075 | ID=Msa1058660-mRNA-1:cds;Parent=Msa1058660-mRNA-1 |
| chr7_2 | CDS | 43723540 | 43723755 | 43723540 | ID=Msa1058660-mRNA-1:cds;Parent=Msa1058660-mRNA-1 |
| chr7_2 | CDS | 43723838 | 43723974 | 43723838 | ID=Msa1058660-mRNA-1:cds;Parent=Msa1058660-mRNA-1 |
| chr7_2 | CDS | 43724066 | 43724157 | 43724066 | ID=Msa1058660-mRNA-1:cds;Parent=Msa1058660-mRNA-1 |
| chr7_2 | CDS | 43724250 | 43724429 | 43724250 | ID=Msa1058660-mRNA-1:cds;Parent=Msa1058660-mRNA-1 |
| chr7_2 | CDS | 43724614 | 43724693 | 43724614 | ID=Msa1058660-mRNA-1:cds;Parent=Msa1058660-mRNA-1 |
| chr7_2 | three_prime_UTR | 43724694 | 43724945 | 43724694 | ID=Msa1058660-mRNA-1:three_prime_utr;Parent=Msa1058660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
