Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012740 | XP_013447916.1 | 99.231 | 260 | 2 | 0 | 1 | 260 | 1 | 260 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012740 | sp|P0DKK7|RL7A2_ORYSJ | 88.846 | 260 | 27 | 1 | 1 | 260 | 1 | 258 | 3.92e-170 | 473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012740 | A0A072TYM4 | 99.231 | 260 | 2 | 0 | 1 | 260 | 1 | 260 | 0.0 | 523 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1012740 | 0.842633 | 2.294863e-58 | -8.615850e-47 |
| Msa0002790 | Msa1012740 | 0.838399 | 2.942942e-57 | -8.615850e-47 |
| Msa0003720 | Msa1012740 | 0.822278 | 2.579962e-53 | -8.615850e-47 |
| Msa0003780 | Msa1012740 | 0.829229 | 5.785630e-55 | -8.615850e-47 |
| Msa0022970 | Msa1012740 | 0.848363 | 6.430481e-60 | -8.615850e-47 |
| Msa0024710 | Msa1012740 | 0.818011 | 2.448624e-52 | -8.615850e-47 |
| Msa0027260 | Msa1012740 | 0.809207 | 2.120415e-50 | -8.615850e-47 |
| Msa0028930 | Msa1012740 | 0.801727 | 7.853771e-49 | -8.615850e-47 |
| Msa0032090 | Msa1012740 | 0.812462 | 4.188006e-51 | -8.615850e-47 |
| Msa0032810 | Msa1012740 | 0.833845 | 4.220349e-56 | -8.615850e-47 |
| Msa0040690 | Msa1012740 | 0.865159 | 7.229006e-65 | -8.615850e-47 |
| Msa0042280 | Msa1012740 | 0.817150 | 3.829206e-52 | -8.615850e-47 |
| Msa0046830 | Msa1012740 | 0.862262 | 5.739782e-64 | -8.615850e-47 |
| Msa0047160 | Msa1012740 | 0.830995 | 2.145329e-55 | -8.615850e-47 |
| Msa0048180 | Msa1012740 | 0.834414 | 3.038821e-56 | -8.615850e-47 |
| Msa0049370 | Msa1012740 | 0.802899 | 4.507154e-49 | -8.615850e-47 |
| Msa0081520 | Msa1012740 | 0.804596 | 2.002699e-49 | -8.615850e-47 |
| Msa0086750 | Msa1012740 | 0.843518 | 1.334316e-58 | -8.615850e-47 |
| Msa0090520 | Msa1012740 | 0.818515 | 1.883376e-52 | -8.615850e-47 |
| Msa0093850 | Msa1012740 | 0.828714 | 7.711135e-55 | -8.615850e-47 |
| Msa0094470 | Msa1012740 | 0.815433 | 9.267571e-52 | -8.615850e-47 |
| Msa0105370 | Msa1012740 | 0.818286 | 2.121363e-52 | -8.615850e-47 |
| Msa0118710 | Msa1012740 | 0.868582 | 5.866596e-66 | -8.615850e-47 |
| Msa0603320 | Msa1012740 | 0.822973 | 1.778027e-53 | -8.615850e-47 |
| Msa0615440 | Msa1012740 | 0.848451 | 6.079304e-60 | -8.615850e-47 |
| Msa0615580 | Msa1012740 | 0.824202 | 9.169066e-54 | -8.615850e-47 |
| Msa0623200 | Msa1012740 | 0.807826 | 4.181619e-50 | -8.615850e-47 |
| Msa0626630 | Msa1012740 | 0.833195 | 6.130978e-56 | -8.615850e-47 |
| Msa0642160 | Msa1012740 | 0.833499 | 5.150738e-56 | -8.615850e-47 |
| Msa0648780 | Msa1012740 | 0.838027 | 3.669636e-57 | -8.615850e-47 |
| Msa0658590 | Msa1012740 | 0.836107 | 1.136140e-56 | -8.615850e-47 |
| Msa0664560 | Msa1012740 | 0.821209 | 4.560419e-53 | -8.615850e-47 |
| Msa0664750 | Msa1012740 | 0.832919 | 7.180444e-56 | -8.615850e-47 |
| Msa0666230 | Msa1012740 | 0.822691 | 2.068594e-53 | -8.615850e-47 |
| Msa0669520 | Msa1012740 | 0.803772 | 2.972553e-49 | -8.615850e-47 |
| Msa0688850 | Msa1012740 | 0.814045 | 1.881273e-51 | -8.615850e-47 |
| Msa0691530 | Msa1012740 | 0.800960 | 1.127902e-48 | -8.615850e-47 |
| Msa0698490 | Msa1012740 | 0.846679 | 1.866932e-59 | -8.615850e-47 |
| Msa0698660 | Msa1012740 | 0.839434 | 1.587997e-57 | -8.615850e-47 |
| Msa0698780 | Msa1012740 | 0.806515 | 7.925177e-50 | -8.615850e-47 |
| Msa0698800 | Msa1012740 | 0.800100 | 1.688851e-48 | -8.615850e-47 |
| Msa0703550 | Msa1012740 | 0.800605 | 1.332622e-48 | -8.615850e-47 |
| Msa0725440 | Msa1012740 | 0.807299 | 5.408703e-50 | -8.615850e-47 |
| Msa0738100 | Msa1012740 | 0.820497 | 6.647948e-53 | -8.615850e-47 |
| Msa0769590 | Msa1012740 | 0.806865 | 6.684466e-50 | -8.615850e-47 |
| Msa0780490 | Msa1012740 | 0.808544 | 2.940370e-50 | -8.615850e-47 |
| Msa0785130 | Msa1012740 | 0.826056 | 3.343739e-54 | -8.615850e-47 |
| Msa0790400 | Msa1012740 | 0.813547 | 2.421564e-51 | -8.615850e-47 |
| Msa0806880 | Msa1012740 | 0.823443 | 1.381354e-53 | -8.615850e-47 |
| Msa0817540 | Msa1012740 | 0.824118 | 9.597164e-54 | -8.615850e-47 |
| Msa0120880 | Msa1012740 | 0.820363 | 7.137483e-53 | -8.615850e-47 |
| Msa0124450 | Msa1012740 | 0.814899 | 1.217970e-51 | -8.615850e-47 |
| Msa0127100 | Msa1012740 | 0.803591 | 3.239711e-49 | -8.615850e-47 |
| Msa0128860 | Msa1012740 | 0.814002 | 1.923253e-51 | -8.615850e-47 |
| Msa0129660 | Msa1012740 | 0.807570 | 4.738096e-50 | -8.615850e-47 |
| Msa0133540 | Msa1012740 | 0.809908 | 1.499761e-50 | -8.615850e-47 |
| Msa0137990 | Msa1012740 | 0.821760 | 3.401457e-53 | -8.615850e-47 |
| Msa0146280 | Msa1012740 | 0.800482 | 1.411516e-48 | -8.615850e-47 |
| Msa0146340 | Msa1012740 | 0.822045 | 2.922194e-53 | -8.615850e-47 |
| Msa0163760 | Msa1012740 | 0.810115 | 1.352911e-50 | -8.615850e-47 |
| Msa0174730 | Msa1012740 | 0.813515 | 2.462055e-51 | -8.615850e-47 |
| Msa0183900 | Msa1012740 | 0.812652 | 3.806976e-51 | -8.615850e-47 |
| Msa0184200 | Msa1012740 | 0.800677 | 1.287977e-48 | -8.615850e-47 |
| Msa0187930 | Msa1012740 | 0.811852 | 5.690745e-51 | -8.615850e-47 |
| Msa0188350 | Msa1012740 | 0.831391 | 1.714221e-55 | -8.615850e-47 |
| Msa0188690 | Msa1012740 | 0.806448 | 8.186320e-50 | -8.615850e-47 |
| Msa0189300 | Msa1012740 | 0.834292 | 3.261264e-56 | -8.615850e-47 |
| Msa0189700 | Msa1012740 | 0.852612 | 4.117885e-61 | -8.615850e-47 |
| Msa0192480 | Msa1012740 | 0.828734 | 7.625095e-55 | -8.615850e-47 |
| Msa0194540 | Msa1012740 | 0.807165 | 5.774596e-50 | -8.615850e-47 |
| Msa0195340 | Msa1012740 | 0.801190 | 1.012016e-48 | -8.615850e-47 |
| Msa0202020 | Msa1012740 | 0.821582 | 3.740776e-53 | -8.615850e-47 |
| Msa0204960 | Msa1012740 | 0.803627 | 3.185597e-49 | -8.615850e-47 |
| Msa0218830 | Msa1012740 | 0.818374 | 2.026989e-52 | -8.615850e-47 |
| Msa0219120 | Msa1012740 | 0.828991 | 6.607816e-55 | -8.615850e-47 |
| Msa0221000 | Msa1012740 | 0.803848 | 2.865537e-49 | -8.615850e-47 |
| Msa0223230 | Msa1012740 | 0.839646 | 1.399122e-57 | -8.615850e-47 |
| Msa0230490 | Msa1012740 | 0.861399 | 1.054209e-63 | -8.615850e-47 |
| Msa0231100 | Msa1012740 | 0.825621 | 4.243006e-54 | -8.615850e-47 |
| Msa0231660 | Msa1012740 | 0.824935 | 6.164858e-54 | -8.615850e-47 |
| Msa0232010 | Msa1012740 | 0.852155 | 5.557508e-61 | -8.615850e-47 |
| Msa0232080 | Msa1012740 | 0.854054 | 1.588783e-61 | -8.615850e-47 |
| Msa0393280 | Msa1012740 | 0.831648 | 1.481495e-55 | -8.615850e-47 |
| Msa0393370 | Msa1012740 | 0.835727 | 1.418379e-56 | -8.615850e-47 |
| Msa0435420 | Msa1012740 | 0.804057 | 2.592492e-49 | -8.615850e-47 |
| Msa0437020 | Msa1012740 | 0.851243 | 1.007551e-60 | -8.615850e-47 |
| Msa0443390 | Msa1012740 | 0.811775 | 5.912859e-51 | -8.615850e-47 |
| Msa0472550 | Msa1012740 | 0.828555 | 8.424101e-55 | -8.615850e-47 |
| Msa0472620 | Msa1012740 | 0.819462 | 1.146794e-52 | -8.615850e-47 |
| Msa0997430 | Msa1012740 | 0.810530 | 1.101209e-50 | -8.615850e-47 |
| Msa1006840 | Msa1012740 | 0.866333 | 3.079537e-65 | -8.615850e-47 |
| Msa1012740 | Msa1012770 | 0.933894 | 9.347364e-96 | -8.615850e-47 |
| Msa1012740 | Msa1013400 | 0.805636 | 1.213374e-49 | -8.615850e-47 |
| Msa1012740 | Msa1019240 | 0.814197 | 1.741296e-51 | -8.615850e-47 |
| Msa1012740 | Msa1019260 | 0.809874 | 1.525246e-50 | -8.615850e-47 |
| Msa1012740 | Msa1021520 | 0.805837 | 1.100722e-49 | -8.615850e-47 |
| Msa1012740 | Msa1043690 | 0.826299 | 2.926895e-54 | -8.615850e-47 |
| Msa1012740 | Msa1051880 | 0.819064 | 1.413127e-52 | -8.615850e-47 |
| Msa1012740 | Msa1058660 | 0.808894 | 2.474994e-50 | -8.615850e-47 |
| Msa1012740 | Msa1072710 | 0.843947 | 1.024086e-58 | -8.615850e-47 |
| Msa1012740 | Msa1093530 | 0.814437 | 1.541642e-51 | -8.615850e-47 |
| Msa1012740 | Msa1094380 | 0.859165 | 4.994679e-63 | -8.615850e-47 |
| Msa1012740 | Msa1104140 | 0.836706 | 7.994839e-57 | -8.615850e-47 |
| Msa1012740 | Msa1104210 | 0.815802 | 7.670680e-52 | -8.615850e-47 |
| Msa1012740 | Msa1123770 | 0.844200 | 8.758575e-59 | -8.615850e-47 |
| Msa1012740 | Msa1127590 | 0.808488 | 3.021559e-50 | -8.615850e-47 |
| Msa1012740 | Msa1132480 | 0.823570 | 1.289893e-53 | -8.615850e-47 |
| Msa1012740 | Msa1135890 | 0.889427 | 2.445619e-73 | -8.615850e-47 |
| Msa1012740 | Msa1145240 | 0.812666 | 3.780050e-51 | -8.615850e-47 |
| Msa1012740 | Msa1148910 | 0.803496 | 3.391213e-49 | -8.615850e-47 |
| Msa1012740 | Msa1169910 | 0.840276 | 9.587572e-58 | -8.615850e-47 |
| Msa1012740 | Msa1170670 | 0.824261 | 8.884845e-54 | -8.615850e-47 |
| Msa1012740 | Msa1209200 | 0.826937 | 2.062044e-54 | -8.615850e-47 |
| Msa1012740 | Msa1215820 | 0.844490 | 7.320038e-59 | -8.615850e-47 |
| Msa1012740 | Msa1218450 | 0.864806 | 9.327410e-65 | -8.615850e-47 |
| Msa1012740 | Msa1219000 | 0.822063 | 2.894310e-53 | -8.615850e-47 |
| Msa1012740 | Msa1226470 | 0.835561 | 1.561880e-56 | -8.615850e-47 |
| Msa1012740 | Msa1230580 | 0.808918 | 2.445582e-50 | -8.615850e-47 |
| Msa1012740 | Msa1258390 | 0.802062 | 6.702888e-49 | -8.615850e-47 |
| Msa1012740 | Msa1262890 | 0.848887 | 4.603317e-60 | -8.615850e-47 |
| Msa1012740 | Msa1265630 | 0.835255 | 1.866579e-56 | -8.615850e-47 |
| Msa1012740 | Msa1275680 | 0.843931 | 1.034484e-58 | -8.615850e-47 |
| Msa1012740 | Msa1332760 | 0.830287 | 3.196510e-55 | -8.615850e-47 |
| Msa1012740 | Msa1343260 | 0.818925 | 1.519438e-52 | -8.615850e-47 |
| Msa1012740 | Msa1363330 | 0.832108 | 1.140823e-55 | -8.615850e-47 |
| Msa1012740 | Msa1374060 | 0.805446 | 1.329964e-49 | -8.615850e-47 |
| Msa1012740 | Msa1374120 | 0.840640 | 7.700281e-58 | -8.615850e-47 |
| Msa1012740 | Msa1379760 | 0.806573 | 7.705208e-50 | -8.615850e-47 |
| Msa1012740 | Msa1382560 | 0.804038 | 2.616361e-49 | -8.615850e-47 |
| Msa1012740 | Msa1382620 | 0.806534 | 7.852774e-50 | -8.615850e-47 |
| Msa1012740 | Msa1385720 | 0.843516 | 1.335350e-58 | -8.615850e-47 |
| Msa1012740 | Msa1386600 | 0.833001 | 6.851683e-56 | -8.615850e-47 |
| Msa1012740 | Msa1394290 | 0.825933 | 3.577198e-54 | -8.615850e-47 |
| Msa1012740 | Msa1399530 | 0.810506 | 1.114394e-50 | -8.615850e-47 |
| Msa1012740 | Msa1405930 | 0.827516 | 1.498131e-54 | -8.615850e-47 |
| Msa1012740 | Msa1411970 | 0.816554 | 5.209480e-52 | -8.615850e-47 |
| Msa1012740 | Msa1413500 | 0.817245 | 3.644039e-52 | -8.615850e-47 |
| Msa1012740 | Msa1426490 | 0.813312 | 2.728112e-51 | -8.615850e-47 |
| Msa1012740 | Msa1427560 | 0.802584 | 5.234725e-49 | -8.615850e-47 |
| Msa1012740 | Msa1432700 | 0.835242 | 1.880295e-56 | -8.615850e-47 |
| Msa1012740 | Msa1434090 | 0.849082 | 4.062929e-60 | -8.615850e-47 |
| Msa1012740 | Msa1440310 | 0.856626 | 2.833067e-62 | -8.615850e-47 |
| Msa1012740 | Msa1443300 | 0.816903 | 4.350749e-52 | -8.615850e-47 |
| Msa1012740 | Msa1448690 | 0.803810 | 2.919053e-49 | -8.615850e-47 |
| Msa1012740 | Msa1457920 | 0.811998 | 5.289025e-51 | -8.615850e-47 |
| Msa1012740 | Msa1465260 | 0.829587 | 4.736624e-55 | -8.615850e-47 |
| Msa0240900 | Msa1012740 | 0.811253 | 7.680125e-51 | -8.615850e-47 |
| Msa0244780 | Msa1012740 | 0.810974 | 8.827808e-51 | -8.615850e-47 |
| Msa0249580 | Msa1012740 | 0.808449 | 3.080654e-50 | -8.615850e-47 |
| Msa0250820 | Msa1012740 | 0.826441 | 2.708614e-54 | -8.615850e-47 |
| Msa0258390 | Msa1012740 | 0.879944 | 8.240512e-70 | -8.615850e-47 |
| Msa0258850 | Msa1012740 | 0.844749 | 6.233392e-59 | -8.615850e-47 |
| Msa0261170 | Msa1012740 | 0.816915 | 4.322517e-52 | -8.615850e-47 |
| Msa0262480 | Msa1012740 | 0.808535 | 2.953140e-50 | -8.615850e-47 |
| Msa0264010 | Msa1012740 | 0.853395 | 2.457756e-61 | -8.615850e-47 |
| Msa0268130 | Msa1012740 | 0.802210 | 6.251546e-49 | -8.615850e-47 |
| Msa0281530 | Msa1012740 | 0.804196 | 2.426007e-49 | -8.615850e-47 |
| Msa0283390 | Msa1012740 | 0.801763 | 7.723971e-49 | -8.615850e-47 |
| Msa0289580 | Msa1012740 | 0.889392 | 2.524037e-73 | -8.615850e-47 |
| Msa0289610 | Msa1012740 | 0.885019 | 1.165829e-71 | -8.615850e-47 |
| Msa0296250 | Msa1012740 | 0.815309 | 9.873557e-52 | -8.615850e-47 |
| Msa0297610 | Msa1012740 | 0.866398 | 2.935655e-65 | -8.615850e-47 |
| Msa0298140 | Msa1012740 | 0.800915 | 1.151858e-48 | -8.615850e-47 |
| Msa0298200 | Msa1012740 | 0.843933 | 1.032878e-58 | -8.615850e-47 |
| Msa0298990 | Msa1012740 | 0.805462 | 1.319473e-49 | -8.615850e-47 |
| Msa0305780 | Msa1012740 | 0.800691 | 1.279860e-48 | -8.615850e-47 |
| Msa0307850 | Msa1012740 | 0.815778 | 7.765496e-52 | -8.615850e-47 |
| Msa0317910 | Msa1012740 | 0.805618 | 1.223509e-49 | -8.615850e-47 |
| Msa0317970 | Msa1012740 | 0.807277 | 5.468870e-50 | -8.615850e-47 |
| Msa0322240 | Msa1012740 | 0.804913 | 1.719559e-49 | -8.615850e-47 |
| Msa0326480 | Msa1012740 | 0.803132 | 4.033973e-49 | -8.615850e-47 |
| Msa0327300 | Msa1012740 | 0.896434 | 3.704525e-76 | -8.615850e-47 |
| Msa0327330 | Msa1012740 | 0.853457 | 2.359535e-61 | -8.615850e-47 |
| Msa0335730 | Msa1012740 | 0.847568 | 1.064945e-59 | -8.615850e-47 |
| Msa0336010 | Msa1012740 | 0.846322 | 2.335566e-59 | -8.615850e-47 |
| Msa0341690 | Msa1012740 | 0.838017 | 3.690355e-57 | -8.615850e-47 |
| Msa0342850 | Msa1012740 | 0.805488 | 1.302909e-49 | -8.615850e-47 |
| Msa0348830 | Msa1012740 | 0.815201 | 1.043626e-51 | -8.615850e-47 |
| Msa0357900 | Msa1012740 | 0.853821 | 1.854357e-61 | -8.615850e-47 |
| Msa0483110 | Msa1012740 | 0.828923 | 6.863243e-55 | -8.615850e-47 |
| Msa0485510 | Msa1012740 | 0.829674 | 4.511592e-55 | -8.615850e-47 |
| Msa0520660 | Msa1012740 | 0.800347 | 1.503964e-48 | -8.615850e-47 |
| Msa0526540 | Msa1012740 | 0.829588 | 4.733285e-55 | -8.615850e-47 |
| Msa0527020 | Msa1012740 | 0.827473 | 1.534249e-54 | -8.615850e-47 |
| Msa0527150 | Msa1012740 | 0.812347 | 4.438825e-51 | -8.615850e-47 |
| Msa0531650 | Msa1012740 | 0.849510 | 3.087523e-60 | -8.615850e-47 |
| Msa0554290 | Msa1012740 | 0.809527 | 1.810599e-50 | -8.615850e-47 |
| Msa0554920 | Msa1012740 | 0.803083 | 4.128596e-49 | -8.615850e-47 |
| Msa0576940 | Msa1012740 | 0.813951 | 1.973974e-51 | -8.615850e-47 |
| Msa0581280 | Msa1012740 | 0.834161 | 3.517479e-56 | -8.615850e-47 |
| Msa0586420 | Msa1012740 | 0.812199 | 4.780136e-51 | -8.615850e-47 |
| Msa0588360 | Msa1012740 | 0.864626 | 1.062007e-64 | -8.615850e-47 |
| Msa0881290 | Msa1012740 | 0.852826 | 3.577212e-61 | -8.615850e-47 |
| Msa0902760 | Msa1012740 | 0.814224 | 1.717995e-51 | -8.615850e-47 |
| Msa0953310 | Msa1012740 | 0.814040 | 1.886339e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012740 | MtrunA17_Chr7g0224411 | 99.231 | 260 | 2 | 0 | 1 | 260 | 1 | 260 | 0.0 | 523 |
| Msa1012740 | MtrunA17_Chr4g0037721 | 92.692 | 260 | 18 | 1 | 1 | 260 | 1 | 259 | 4.62e-178 | 489 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012740 | AT3G62870.1 | 82.308 | 260 | 42 | 1 | 1 | 260 | 1 | 256 | 2.34e-160 | 445 |
| Msa1012740 | AT2G47610.1 | 86.008 | 243 | 34 | 0 | 18 | 260 | 15 | 257 | 5.17e-159 | 442 |
Find 87 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGCAATGAGTCTTTCTT+TGG | 0.198830 | 7_1:-18186614 | None:intergenic |
| GAAGTGGGGTGGTGGTATTA+TGG | 0.264609 | 7_1:+18186564 | Msa1012740:CDS |
| GAGAAGAGGCCAAAGCAATT+TGG | 0.270772 | 7_1:+18184451 | Msa1012740:CDS |
| AGTCCATATTTCACATTAAT+AGG | 0.274436 | 7_1:-18185970 | None:intergenic |
| GTTTGTGAGGTGAACTTAAA+AGG | 0.276354 | 7_1:-18184175 | None:intergenic |
| AAGCCTATTAATGTGAAATA+TGG | 0.287894 | 7_1:+18185967 | Msa1012740:CDS |
| AACCTTGTCAAATCTCTCTT+TGG | 0.311553 | 7_1:-18184493 | None:intergenic |
| CGTCAAGAATGAAGACAAAA+TGG | 0.320782 | 7_1:+18186374 | Msa1012740:CDS |
| AGAAGAGGCCAAAGCAATTT+GGG | 0.324521 | 7_1:+18184452 | Msa1012740:CDS |
| AAGTGGGGTGGTGGTATTAT+GGG | 0.327204 | 7_1:+18186565 | Msa1012740:CDS |
| TGTCAAGGGCAAAGCACGTT+TGG | 0.330406 | 7_1:+18186222 | Msa1012740:CDS |
| AGCCAGACAACGAGCTCAAT+TGG | 0.346442 | 7_1:-18186160 | None:intergenic |
| CTCTGAATCTGCACCGTCTT+AGG | 0.355241 | 7_1:-18184526 | None:intergenic |
| CATTCTTTGAGCAGCTTCCT+TGG | 0.361728 | 7_1:-18186632 | None:intergenic |
| CCAAAGCAAATGGAATTTCT+AGG | 0.364165 | 7_1:-18186656 | None:intergenic |
| TTCTTCTTCGCTGCTGCAAC+TGG | 0.368855 | 7_1:-18184397 | None:intergenic |
| CCTAGAAATTCCATTTGCTT+TGG | 0.376226 | 7_1:+18186656 | Msa1012740:exon |
| TCTGGTTTGAATTACCTTGA+TGG | 0.376236 | 7_1:-18186418 | None:intergenic |
| AGCTTGTAATTCACAATCAA+TGG | 0.379531 | 7_1:+18186769 | Msa1012740:three_prime_UTR |
| TATCGAGTGTCTTAGTGAAC+TGG | 0.404157 | 7_1:-18184597 | None:intergenic |
| GTCAAGGGCAAAGCACGTTT+GGG | 0.408522 | 7_1:+18186223 | Msa1012740:CDS |
| ACGACAAATTTGAGGAAAAC+AGG | 0.415015 | 7_1:+18186539 | Msa1012740:CDS |
| ACCCAATTGAGCTCGTTGTC+TGG | 0.417238 | 7_1:+18186158 | Msa1012740:CDS |
| TCCAGCTTTGTGCAGAAAGA+TGG | 0.419185 | 7_1:+18186183 | Msa1012740:CDS |
| TTTGCCCTCAGATTCGGCTT+GGG | 0.426690 | 7_1:-18185929 | None:intergenic |
| ATTTGACAAGGTTTGTGAAA+TGG | 0.429794 | 7_1:+18184503 | Msa1012740:CDS |
| TTTGTGAGGTGAACTTAAAA+GGG | 0.434212 | 7_1:-18184174 | None:intergenic |
| CCACCGATCCCAAATTGCTT+TGG | 0.444497 | 7_1:-18184460 | None:intergenic |
| AGAAGGAACGTCTCTTGAAA+AGG | 0.447060 | 7_1:+18185905 | Msa1012740:CDS |
| TTGATGAAAGAGGCGGAAGA+AGG | 0.450631 | 7_1:-18184228 | None:intergenic |
| CAGTACCTGCTCAATAAGAT+AGG | 0.450777 | 7_1:-18186004 | None:intergenic |
| TCCATCTTTCTGCACAAAGC+TGG | 0.451418 | 7_1:-18186184 | None:intergenic |
| TAACTTTAACGACAAATTTG+AGG | 0.461068 | 7_1:+18186531 | Msa1012740:CDS |
| TGTCCTCAGGCCTGTACTTG+AGG | 0.467651 | 7_1:-18185873 | None:intergenic |
| AACAGGAAGAAGTGGGGTGG+TGG | 0.477152 | 7_1:+18186556 | Msa1012740:CDS |
| GAACCTTCAACCTCTGCTTA+AGG | 0.478965 | 7_1:-18184561 | None:intergenic |
| GAATTACCTTGATGGCCTCT+AGG | 0.480564 | 7_1:-18186410 | None:intergenic |
| ACTTGAGGAGCATCTTGAAA+AGG | 0.488088 | 7_1:-18185858 | None:intergenic |
| CTTGTCAAATCTCTCTTTGG+TGG | 0.494306 | 7_1:-18184490 | None:intergenic |
| GCCAGACAACGAGCTCAATT+GGG | 0.496078 | 7_1:-18186159 | None:intergenic |
| TATACTAAGACAGCAAATGA+AGG | 0.505062 | 7_1:-18186939 | None:intergenic |
| TCAAGATGCTCCTCAAGTAC+AGG | 0.506258 | 7_1:+18185863 | Msa1012740:CDS |
| GATCCTTAAGCAGAGGTTGA+AGG | 0.507984 | 7_1:+18184558 | Msa1012740:CDS |
| TGAGGAAAACAGGAAGAAGT+GGG | 0.515672 | 7_1:+18186549 | Msa1012740:CDS |
| GAAGGAACGTCTCTTGAAAA+GGG | 0.519164 | 7_1:+18185906 | Msa1012740:CDS |
| CAGAATCCTAGAGGCCATCA+AGG | 0.522029 | 7_1:+18186404 | Msa1012740:CDS |
| TAAAAGGGTTATCAAAATGT+GGG | 0.530346 | 7_1:-18184159 | None:intergenic |
| TTAAAAGGGTTATCAAAATG+TGG | 0.533409 | 7_1:-18184160 | None:intergenic |
| TGTTACCTATCTTATTGAGC+AGG | 0.541671 | 7_1:+18185999 | Msa1012740:CDS |
| TTACAAGCTAACAGAATGAA+AGG | 0.542137 | 7_1:-18186755 | None:intergenic |
| TGCAGATTCAGAGGAAGAAG+AGG | 0.543903 | 7_1:+18184536 | Msa1012740:CDS |
| GACGGTTGTCAAGCACAAAA+CGG | 0.544344 | 7_1:-18186355 | None:intergenic |
| CACCAAAGAGAGATTTGACA+AGG | 0.544974 | 7_1:+18184491 | Msa1012740:CDS |
| TTGATGTTGTTTGATGAAAG+AGG | 0.546296 | 7_1:-18184238 | None:intergenic |
| GAAGAATACAGCACTGAAAG+TGG | 0.550599 | 7_1:+18184414 | Msa1012740:CDS |
| TTGAGGAAAACAGGAAGAAG+TGG | 0.552443 | 7_1:+18186548 | Msa1012740:CDS |
| TTTGCCCTTGACAATGCAGT+AGG | 0.558136 | 7_1:-18186212 | None:intergenic |
| TGAGGACAAAGCTGAAAAGA+AGG | 0.558356 | 7_1:+18185888 | Msa1012740:CDS |
| AATTCCCTACTGCATTGTCA+AGG | 0.570742 | 7_1:+18186207 | Msa1012740:CDS |
| AAGGGCCCAAGCCGAATCTG+AGG | 0.570757 | 7_1:+18185924 | Msa1012740:CDS |
| TTAGTGAACTGGTTAAGAGC+AGG | 0.576262 | 7_1:-18184586 | None:intergenic |
| AAATAAATCAGCAAAAGTGC+AGG | 0.578724 | 7_1:-18186800 | None:intergenic |
| TTCACCTCACAAACACCACT+AGG | 0.581666 | 7_1:+18184184 | Msa1012740:five_prime_UTR |
| TTGCCCTTGACAATGCAGTA+GGG | 0.602893 | 7_1:-18186211 | None:intergenic |
| CTAAGACGGTGCAGATTCAG+AGG | 0.603377 | 7_1:+18184527 | Msa1012740:CDS |
| CCAAAGCAATTTGGGATCGG+TGG | 0.603444 | 7_1:+18184460 | Msa1012740:CDS |
| AGGCCAAAGCAATTTGGGAT+CGG | 0.609688 | 7_1:+18184457 | Msa1012740:CDS |
| GTTTGTGAAATGGCCTAAGA+CGG | 0.612460 | 7_1:+18184513 | Msa1012740:CDS |
| ATTCCCTACTGCATTGTCAA+GGG | 0.614650 | 7_1:+18186208 | Msa1012740:CDS |
| TCACCTCACAAACACCACTA+GGG | 0.622915 | 7_1:+18184185 | Msa1012740:five_prime_UTR |
| CAAAGAAAGACTCATTGCCA+AGG | 0.625721 | 7_1:+18186615 | Msa1012740:CDS |
| GAAGAAGGAGAAATGTGCAA+TGG | 0.626196 | 7_1:-18184213 | None:intergenic |
| GTGAACTGGTTAAGAGCAGG+TGG | 0.627497 | 7_1:-18184583 | None:intergenic |
| TCAAACAACATCAACAACAA+TGG | 0.632516 | 7_1:+18184247 | Msa1012740:exon |
| AGGGCCCAAGCCGAATCTGA+GGG | 0.638813 | 7_1:+18185925 | Msa1012740:CDS |
| AGAAGAGGATCCTTAAGCAG+AGG | 0.647604 | 7_1:+18184551 | Msa1012740:CDS |
| TATTTACAGGCACCAAAGCG+CGG | 0.650226 | 7_1:+18184364 | Msa1012740:intron |
| GAAAACAGGAAGAAGTGGGG+TGG | 0.655947 | 7_1:+18186553 | Msa1012740:CDS |
| GCTCAATAAGATAGGTAACA+TGG | 0.658823 | 7_1:-18185996 | None:intergenic |
| TTACAGGCACCAAAGCGCGG+TGG | 0.663704 | 7_1:+18184367 | Msa1012740:intron |
| GAGGAAAACAGGAAGAAGTG+GGG | 0.665767 | 7_1:+18186550 | Msa1012740:CDS |
| AAACCCTAGTGGTGTTTGTG+AGG | 0.666182 | 7_1:-18184188 | None:intergenic |
| CAAATCTCAAGCGAAAACAA+AGG | 0.673595 | 7_1:+18186591 | Msa1012740:CDS |
| GGAATTCAGCAGAATCCTAG+AGG | 0.681733 | 7_1:+18186395 | Msa1012740:CDS |
| GCTCCTCAAGTACAGGCCTG+AGG | 0.691529 | 7_1:+18185870 | Msa1012740:CDS |
| ATGTTGTTTGATGAAAGAGG+CGG | 0.782823 | 7_1:-18184235 | None:intergenic |
| GTGCAATGGAGAAACCCTAG+TGG | 0.799404 | 7_1:-18184199 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAAAATTTGTGTTTAAT+TGG | + | chr7_1:18184735-18184754 | Msa1012740:intron | 10.0% |
| !!! | TTTAATTGATTTAATTGATA+TGG | + | chr7_1:18185051-18185070 | Msa1012740:intron | 10.0% |
| !!! | TTAATTGATTTAATTGATAT+GGG | + | chr7_1:18185052-18185071 | Msa1012740:intron | 10.0% |
| !!! | TTTTAGATTTGGTTTTAATT+TGG | + | chr7_1:18184676-18184695 | Msa1012740:intron | 15.0% |
| !! | ATGTTTGATCAATAAAATTT+AGG | + | chr7_1:18184796-18184815 | Msa1012740:intron | 15.0% |
| !!! | GGTTATTATTGTTTAAAATA+AGG | + | chr7_1:18184879-18184898 | Msa1012740:intron | 15.0% |
| !!! | TTTTGTTCTTTTTTAAGATA+AGG | + | chr7_1:18185271-18185290 | Msa1012740:intron | 15.0% |
| !!! | TTTGTTCTTTTTTAAGATAA+GGG | + | chr7_1:18185272-18185291 | Msa1012740:intron | 15.0% |
| !! | ATTATTGAAATCATGATTAT+TGG | + | chr7_1:18185769-18185788 | Msa1012740:intron | 15.0% |
| !! | CGATTATCTTTATTATTTAC+AGG | + | chr7_1:18184351-18184370 | Msa1012740:intron | 20.0% |
| !! | TAGCTCATTTGTTTATAAAA+TGG | + | chr7_1:18184644-18184663 | Msa1012740:intron | 20.0% |
| !! | TTTATGTGTAATGCTTTAAT+GGG | + | chr7_1:18184701-18184720 | Msa1012740:intron | 20.0% |
| !! | TGCTATTGTTATAGATTAAT+TGG | + | chr7_1:18184857-18184876 | Msa1012740:intron | 20.0% |
| !! | GCTATTGTTATAGATTAATT+GGG | + | chr7_1:18184858-18184877 | Msa1012740:intron | 20.0% |
| !! | TTAATGTGAAATGGTTTAAT+TGG | + | chr7_1:18185122-18185141 | Msa1012740:intron | 20.0% |
| !! | TAATGTGAAATGGTTTAATT+GGG | + | chr7_1:18185123-18185142 | Msa1012740:intron | 20.0% |
| !!! | GATGTTAGTTTAAATTGTTT+TGG | + | chr7_1:18185568-18185587 | Msa1012740:intron | 20.0% |
| !! | TACTTGTTCATATAAACAAA+AGG | - | chr7_1:18186032-18186051 | None:intergenic | 20.0% |
| !!! | TTTTTTACCTTCTATTTTTC+AGG | + | chr7_1:18186507-18186526 | Msa1012740:intron | 20.0% |
| !!! | TTGTTATTGTCCTATATTTT+TGG | + | chr7_1:18186699-18186718 | Msa1012740:three_prime_UTR | 20.0% |
| !!! | AGTTGTTTTAGACTTAAAAA+TGG | + | chr7_1:18186827-18186846 | Msa1012740:three_prime_UTR | 20.0% |
| ! | TAAAAGGGTTATCAAAATGT+GGG | - | chr7_1:18184162-18184181 | None:intergenic | 25.0% |
| ! | TTAAAAGGGTTATCAAAATG+TGG | - | chr7_1:18184163-18184182 | None:intergenic | 25.0% |
| !!! | GGTGATTATGTTTTTAGATT+TGG | + | chr7_1:18184665-18184684 | Msa1012740:intron | 25.0% |
| ! | GTTTATGTGTAATGCTTTAA+TGG | + | chr7_1:18184700-18184719 | Msa1012740:intron | 25.0% |
| ! | ATTTGTGTTTAATTGGCATA+TGG | + | chr7_1:18184742-18184761 | Msa1012740:intron | 25.0% |
| ! | ATGGTATTTGATATGTGTAA+TGG | + | chr7_1:18185007-18185026 | Msa1012740:intron | 25.0% |
| ! | TGGTATTTGATATGTGTAAT+GGG | + | chr7_1:18185008-18185027 | Msa1012740:intron | 25.0% |
| ! | AAGTTTCATTTCTTTGTTCT+GGG | + | chr7_1:18185225-18185244 | Msa1012740:intron | 25.0% |
| !!! | TGTTTATTTTGTCTATTGCT+TGG | + | chr7_1:18185349-18185368 | Msa1012740:intron | 25.0% |
| !!! | TGTTTATTTTGTCTATTGCT+TGG | + | chr7_1:18185349-18185368 | Msa1012740:intron | 25.0% |
| !!! | TGTTTATTTTATCGATTGCA+TGG | + | chr7_1:18185495-18185514 | Msa1012740:intron | 25.0% |
| ! | GGAAATAGTATATGATAGTT+TGG | + | chr7_1:18185516-18185535 | Msa1012740:intron | 25.0% |
| !!! | TAAATTGTTTTGGAACATGT+TGG | + | chr7_1:18185578-18185597 | Msa1012740:intron | 25.0% |
| ! | TACCAATCAAAAACAAAAGA+CGG | - | chr7_1:18185656-18185675 | None:intergenic | 25.0% |
| ! | ATCCAAAAATCACAAAACAA+TGG | - | chr7_1:18185751-18185770 | None:intergenic | 25.0% |
| ! | AAGCCTATTAATGTGAAATA+TGG | + | chr7_1:18185967-18185986 | Msa1012740:CDS | 25.0% |
| ! | AGTCCATATTTCACATTAAT+AGG | - | chr7_1:18185973-18185992 | None:intergenic | 25.0% |
| ! | TTATTACTAACTGTAACTTG+TGG | + | chr7_1:18186089-18186108 | Msa1012740:intron | 25.0% |
| ! | GTCACAAATTATAAATTCAC+AGG | - | chr7_1:18186287-18186306 | None:intergenic | 25.0% |
| ! | AAAATGAACAATCAAATCTC+TGG | - | chr7_1:18186439-18186458 | None:intergenic | 25.0% |
| ! | AGGTAAAAAACGAACATAAA+AGG | - | chr7_1:18186497-18186516 | None:intergenic | 25.0% |
| ! | TAACTTTAACGACAAATTTG+AGG | + | chr7_1:18186531-18186550 | Msa1012740:CDS | 25.0% |
| ! | CTAAAAATAACCAAAGCAAA+TGG | - | chr7_1:18186669-18186688 | None:intergenic | 25.0% |
| !!! | TGGTTATTTTTAGAACTTTG+AGG | + | chr7_1:18186676-18186695 | Msa1012740:three_prime_UTR | 25.0% |
| !!! | TTATTGTCCTATATTTTTGG+TGG | + | chr7_1:18186702-18186721 | Msa1012740:three_prime_UTR | 25.0% |
| TTTGTGAGGTGAACTTAAAA+GGG | - | chr7_1:18184177-18184196 | None:intergenic | 30.0% | |
| ! | TTGATGTTGTTTGATGAAAG+AGG | - | chr7_1:18184241-18184260 | None:intergenic | 30.0% |
| TCAAACAACATCAACAACAA+TGG | + | chr7_1:18184247-18184266 | Msa1012740:exon | 30.0% | |
| ATTTGACAAGGTTTGTGAAA+TGG | + | chr7_1:18184503-18184522 | Msa1012740:CDS | 30.0% | |
| AAGACACTCGATAAAAATCT+CGG | + | chr7_1:18184607-18184626 | Msa1012740:CDS | 30.0% | |
| TGTTTATTATGTTGAGTGCT+TGG | + | chr7_1:18184982-18185001 | Msa1012740:intron | 30.0% | |
| GATTTCGTGTTAATGTGAAA+TGG | + | chr7_1:18185113-18185132 | Msa1012740:intron | 30.0% | |
| ATTGGGTGGTTGTTAAAATT+TGG | + | chr7_1:18185140-18185159 | Msa1012740:intron | 30.0% | |
| TTGGGTGGTTGTTAAAATTT+GGG | + | chr7_1:18185141-18185160 | Msa1012740:intron | 30.0% | |
| GAAGTTTCATTTCTTTGTTC+TGG | + | chr7_1:18185224-18185243 | Msa1012740:intron | 30.0% | |
| TTGGATAGTATGTGATAGTT+TGG | + | chr7_1:18185368-18185387 | Msa1012740:intron | 30.0% | |
| GTATATGATAGTTTGGACTT+TGG | + | chr7_1:18185523-18185542 | Msa1012740:intron | 30.0% | |
| ATCACAAATACGATAGTCTT+CGG | - | chr7_1:18185631-18185650 | None:intergenic | 30.0% | |
| ACCAATCAAAAACAAAAGAC+GGG | - | chr7_1:18185655-18185674 | None:intergenic | 30.0% | |
| !!! | GTTTTGACTATGACTATTGA+AGG | + | chr7_1:18185680-18185699 | Msa1012740:intron | 30.0% |
| !! | GACCATTGTTTTGTGATTTT+TGG | + | chr7_1:18185746-18185765 | Msa1012740:intron | 30.0% |
| ATTCACAGGTGAAAATTCTA+TGG | - | chr7_1:18186273-18186292 | None:intergenic | 30.0% | |
| ! | CATTTTGTCTTCATTCTTGA+CGG | - | chr7_1:18186376-18186395 | None:intergenic | 30.0% |
| ! | AAGTTAGCCTGAAAAATAGA+AGG | - | chr7_1:18186517-18186536 | None:intergenic | 30.0% |
| AAAACCTCCACCAAAAATAT+AGG | - | chr7_1:18186712-18186731 | None:intergenic | 30.0% | |
| TTACAAGCTAACAGAATGAA+AGG | - | chr7_1:18186758-18186777 | None:intergenic | 30.0% | |
| AGCTTGTAATTCACAATCAA+TGG | + | chr7_1:18186769-18186788 | Msa1012740:three_prime_UTR | 30.0% | |
| ! | AAATAAATCAGCAAAAGTGC+AGG | - | chr7_1:18186803-18186822 | None:intergenic | 30.0% |
| GTTTGTGAGGTGAACTTAAA+AGG | - | chr7_1:18184178-18184197 | None:intergenic | 35.0% | |
| ! | ATGTTGTTTGATGAAAGAGG+CGG | - | chr7_1:18184238-18184257 | None:intergenic | 35.0% |
| AACCTTGTCAAATCTCTCTT+TGG | - | chr7_1:18184496-18184515 | None:intergenic | 35.0% | |
| ! | ATTGGCATATGGTCTTAGTT+TGG | + | chr7_1:18184753-18184772 | Msa1012740:intron | 35.0% |
| TTATGTTGAGTGCTTGGAAA+TGG | + | chr7_1:18184988-18185007 | Msa1012740:intron | 35.0% | |
| TGTGAAATGGTTTAATTGGG+TGG | + | chr7_1:18185126-18185145 | Msa1012740:intron | 35.0% | |
| !! | TAGTTTGGACTTTGGAGTAA+TGG | + | chr7_1:18185531-18185550 | Msa1012740:intron | 35.0% |
| TGACTATTGAAGGTTCTGTA+TGG | + | chr7_1:18185690-18185709 | Msa1012740:intron | 35.0% | |
| GCTCAATAAGATAGGTAACA+TGG | - | chr7_1:18185999-18186018 | None:intergenic | 35.0% | |
| TGTTACCTATCTTATTGAGC+AGG | + | chr7_1:18185999-18186018 | Msa1012740:CDS | 35.0% | |
| CGTCAAGAATGAAGACAAAA+TGG | + | chr7_1:18186374-18186393 | Msa1012740:CDS | 35.0% | |
| ! | TCTGGTTTGAATTACCTTGA+TGG | - | chr7_1:18186421-18186440 | None:intergenic | 35.0% |
| ACGACAAATTTGAGGAAAAC+AGG | + | chr7_1:18186539-18186558 | Msa1012740:CDS | 35.0% | |
| !!! | CTTTGTTTTCGCTTGAGATT+TGG | - | chr7_1:18186593-18186612 | None:intergenic | 35.0% |
| CAAATCTCAAGCGAAAACAA+AGG | + | chr7_1:18186591-18186610 | Msa1012740:CDS | 35.0% | |
| CCAAAGCAAATGGAATTTCT+AGG | - | chr7_1:18186659-18186678 | None:intergenic | 35.0% | |
| CCTAGAAATTCCATTTGCTT+TGG | + | chr7_1:18186656-18186675 | Msa1012740:exon | 35.0% | |
| !!! | TTGTCCTATATTTTTGGTGG+AGG | + | chr7_1:18186705-18186724 | Msa1012740:three_prime_UTR | 35.0% |
| GAAGAAGGAGAAATGTGCAA+TGG | - | chr7_1:18184216-18184235 | None:intergenic | 40.0% | |
| AGAGAGAGAGAGAGAGATTA+GGG | - | chr7_1:18184276-18184295 | None:intergenic | 40.0% | |
| ! | GAAGAATACAGCACTGAAAG+TGG | + | chr7_1:18184414-18184433 | Msa1012740:CDS | 40.0% |
| !!! | TGAACCCACTTTTTGAGAAG+AGG | + | chr7_1:18184437-18184456 | Msa1012740:CDS | 40.0% |
| TTGGCCTCTTCTCAAAAAGT+GGG | - | chr7_1:18184444-18184463 | None:intergenic | 40.0% | |
| TTTGGCCTCTTCTCAAAAAG+TGG | - | chr7_1:18184445-18184464 | None:intergenic | 40.0% | |
| AGAAGAGGCCAAAGCAATTT+GGG | + | chr7_1:18184452-18184471 | Msa1012740:CDS | 40.0% | |
| CTTGTCAAATCTCTCTTTGG+TGG | - | chr7_1:18184493-18184512 | None:intergenic | 40.0% | |
| CACCAAAGAGAGATTTGACA+AGG | + | chr7_1:18184491-18184510 | Msa1012740:CDS | 40.0% | |
| GTTTGTGAAATGGCCTAAGA+CGG | + | chr7_1:18184513-18184532 | Msa1012740:CDS | 40.0% | |
| TTAGTGAACTGGTTAAGAGC+AGG | - | chr7_1:18184589-18184608 | None:intergenic | 40.0% | |
| TATCGAGTGTCTTAGTGAAC+TGG | - | chr7_1:18184600-18184619 | None:intergenic | 40.0% | |
| !! | TTGGACTTTGGAGTAATGGT+AGG | + | chr7_1:18185535-18185554 | Msa1012740:intron | 40.0% |
| !!! | GCCCGTCTTTTGTTTTTGAT+TGG | + | chr7_1:18185651-18185670 | Msa1012740:intron | 40.0% |
| !! | ACTTGAGGAGCATCTTGAAA+AGG | - | chr7_1:18185861-18185880 | None:intergenic | 40.0% |
| !! | TTCTTTTCAGCTTTGTCCTC+AGG | - | chr7_1:18185889-18185908 | None:intergenic | 40.0% |
| TGAGGACAAAGCTGAAAAGA+AGG | + | chr7_1:18185888-18185907 | Msa1012740:CDS | 40.0% | |
| AGAAGGAACGTCTCTTGAAA+AGG | + | chr7_1:18185905-18185924 | Msa1012740:CDS | 40.0% | |
| GAAGGAACGTCTCTTGAAAA+GGG | + | chr7_1:18185906-18185925 | Msa1012740:CDS | 40.0% | |
| CAGTACCTGCTCAATAAGAT+AGG | - | chr7_1:18186007-18186026 | None:intergenic | 40.0% | |
| !!! | CTTGTGGCTTTTTCAGAACA+AGG | + | chr7_1:18186105-18186124 | Msa1012740:intron | 40.0% |
| AATTCCCTACTGCATTGTCA+AGG | + | chr7_1:18186207-18186226 | Msa1012740:CDS | 40.0% | |
| ATTCCCTACTGCATTGTCAA+GGG | + | chr7_1:18186208-18186227 | Msa1012740:CDS | 40.0% | |
| TTGAGGAAAACAGGAAGAAG+TGG | + | chr7_1:18186548-18186567 | Msa1012740:CDS | 40.0% | |
| TGAGGAAAACAGGAAGAAGT+GGG | + | chr7_1:18186549-18186568 | Msa1012740:CDS | 40.0% | |
| CTTGGCAATGAGTCTTTCTT+TGG | - | chr7_1:18186617-18186636 | None:intergenic | 40.0% | |
| CAAAGAAAGACTCATTGCCA+AGG | + | chr7_1:18186615-18186634 | Msa1012740:CDS | 40.0% | |
| TTCACCTCACAAACACCACT+AGG | + | chr7_1:18184184-18184203 | Msa1012740:five_prime_UTR | 45.0% | |
| TCACCTCACAAACACCACTA+GGG | + | chr7_1:18184185-18184204 | Msa1012740:five_prime_UTR | 45.0% | |
| AAACCCTAGTGGTGTTTGTG+AGG | - | chr7_1:18184191-18184210 | None:intergenic | 45.0% | |
| TTGATGAAAGAGGCGGAAGA+AGG | - | chr7_1:18184231-18184250 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAGAGATT+AGG | - | chr7_1:18184277-18184296 | None:intergenic | 45.0% | |
| TATTTACAGGCACCAAAGCG+CGG | + | chr7_1:18184364-18184383 | Msa1012740:intron | 45.0% | |
| GAGAAGAGGCCAAAGCAATT+TGG | + | chr7_1:18184451-18184470 | Msa1012740:CDS | 45.0% | |
| ! | AGGCCAAAGCAATTTGGGAT+CGG | + | chr7_1:18184457-18184476 | Msa1012740:CDS | 45.0% |
| TGCAGATTCAGAGGAAGAAG+AGG | + | chr7_1:18184536-18184555 | Msa1012740:CDS | 45.0% | |
| AGAAGAGGATCCTTAAGCAG+AGG | + | chr7_1:18184551-18184570 | Msa1012740:CDS | 45.0% | |
| GATCCTTAAGCAGAGGTTGA+AGG | + | chr7_1:18184558-18184577 | Msa1012740:CDS | 45.0% | |
| GAACCTTCAACCTCTGCTTA+AGG | - | chr7_1:18184564-18184583 | None:intergenic | 45.0% | |
| TCAAGATGCTCCTCAAGTAC+AGG | + | chr7_1:18185863-18185882 | Msa1012740:CDS | 45.0% | |
| ! | GACTGTTTTGCCCTCAGATT+CGG | - | chr7_1:18185938-18185957 | None:intergenic | 45.0% |
| GACGTACGAGTATGAGAGTA+TGG | - | chr7_1:18186056-18186075 | None:intergenic | 45.0% | |
| ! | TTTTCAGAACAAGGCACAGC+TGG | + | chr7_1:18186114-18186133 | Msa1012740:intron | 45.0% |
| ! | TCCAGCTTTGTGCAGAAAGA+TGG | + | chr7_1:18186183-18186202 | Msa1012740:CDS | 45.0% |
| TCCATCTTTCTGCACAAAGC+TGG | - | chr7_1:18186187-18186206 | None:intergenic | 45.0% | |
| TTGCCCTTGACAATGCAGTA+GGG | - | chr7_1:18186214-18186233 | None:intergenic | 45.0% | |
| TTTGCCCTTGACAATGCAGT+AGG | - | chr7_1:18186215-18186234 | None:intergenic | 45.0% | |
| GACGGTTGTCAAGCACAAAA+CGG | - | chr7_1:18186358-18186377 | None:intergenic | 45.0% | |
| GGAATTCAGCAGAATCCTAG+AGG | + | chr7_1:18186395-18186414 | Msa1012740:CDS | 45.0% | |
| ! | GAATTACCTTGATGGCCTCT+AGG | - | chr7_1:18186413-18186432 | None:intergenic | 45.0% |
| GAGGAAAACAGGAAGAAGTG+GGG | + | chr7_1:18186550-18186569 | Msa1012740:CDS | 45.0% | |
| ! | AAGTGGGGTGGTGGTATTAT+GGG | + | chr7_1:18186565-18186584 | Msa1012740:CDS | 45.0% |
| CATTCTTTGAGCAGCTTCCT+TGG | - | chr7_1:18186635-18186654 | None:intergenic | 45.0% | |
| GTGCAATGGAGAAACCCTAG+TGG | - | chr7_1:18184202-18184221 | None:intergenic | 50.0% | |
| TTCTTCTTCGCTGCTGCAAC+TGG | - | chr7_1:18184400-18184419 | None:intergenic | 50.0% | |
| CCACCGATCCCAAATTGCTT+TGG | - | chr7_1:18184463-18184482 | None:intergenic | 50.0% | |
| ! | CCAAAGCAATTTGGGATCGG+TGG | + | chr7_1:18184460-18184479 | Msa1012740:CDS | 50.0% |
| CTCTGAATCTGCACCGTCTT+AGG | - | chr7_1:18184529-18184548 | None:intergenic | 50.0% | |
| CTAAGACGGTGCAGATTCAG+AGG | + | chr7_1:18184527-18184546 | Msa1012740:CDS | 50.0% | |
| GTGAACTGGTTAAGAGCAGG+TGG | - | chr7_1:18184586-18184605 | None:intergenic | 50.0% | |
| TTTGCCCTCAGATTCGGCTT+GGG | - | chr7_1:18185932-18185951 | None:intergenic | 50.0% | |
| ! | TTTTGCCCTCAGATTCGGCT+TGG | - | chr7_1:18185933-18185952 | None:intergenic | 50.0% |
| ACCCAATTGAGCTCGTTGTC+TGG | + | chr7_1:18186158-18186177 | Msa1012740:CDS | 50.0% | |
| GCCAGACAACGAGCTCAATT+GGG | - | chr7_1:18186162-18186181 | None:intergenic | 50.0% | |
| AGCCAGACAACGAGCTCAAT+TGG | - | chr7_1:18186163-18186182 | None:intergenic | 50.0% | |
| TGTCAAGGGCAAAGCACGTT+TGG | + | chr7_1:18186222-18186241 | Msa1012740:CDS | 50.0% | |
| GTCAAGGGCAAAGCACGTTT+GGG | + | chr7_1:18186223-18186242 | Msa1012740:CDS | 50.0% | |
| CAGAATCCTAGAGGCCATCA+AGG | + | chr7_1:18186404-18186423 | Msa1012740:CDS | 50.0% | |
| GAAAACAGGAAGAAGTGGGG+TGG | + | chr7_1:18186553-18186572 | Msa1012740:CDS | 50.0% | |
| ! | GAAGTGGGGTGGTGGTATTA+TGG | + | chr7_1:18186564-18186583 | Msa1012740:CDS | 50.0% |
| TGTCCTCAGGCCTGTACTTG+AGG | - | chr7_1:18185876-18185895 | None:intergenic | 55.0% | |
| AACAGGAAGAAGTGGGGTGG+TGG | + | chr7_1:18186556-18186575 | Msa1012740:CDS | 55.0% | |
| TTACAGGCACCAAAGCGCGG+TGG | + | chr7_1:18184367-18184386 | Msa1012740:intron | 60.0% | |
| ! | GGTGCTTTTCCACCGCGCTT+TGG | - | chr7_1:18184379-18184398 | None:intergenic | 60.0% |
| GCTCCTCAAGTACAGGCCTG+AGG | + | chr7_1:18185870-18185889 | Msa1012740:CDS | 60.0% | |
| AAGGGCCCAAGCCGAATCTG+AGG | + | chr7_1:18185924-18185943 | Msa1012740:CDS | 60.0% | |
| AGGGCCCAAGCCGAATCTGA+GGG | + | chr7_1:18185925-18185944 | Msa1012740:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 18184153 | 18186951 | 18184153 | ID=Msa1012740;Name=Msa1012740 |
| chr7_1 | mRNA | 18184153 | 18186951 | 18184153 | ID=Msa1012740-mRNA-1;Parent=Msa1012740;Name=Msa1012740-mRNA-1;_AED=0.02;_eAED=0.02;_QI=113|1|1|1|1|1|6|291|260 |
| chr7_1 | exon | 18184153 | 18184268 | 18184153 | ID=Msa1012740-mRNA-1:exon:4530;Parent=Msa1012740-mRNA-1 |
| chr7_1 | exon | 18184373 | 18184628 | 18184373 | ID=Msa1012740-mRNA-1:exon:4531;Parent=Msa1012740-mRNA-1 |
| chr7_1 | exon | 18185851 | 18186020 | 18185851 | ID=Msa1012740-mRNA-1:exon:4532;Parent=Msa1012740-mRNA-1 |
| chr7_1 | exon | 18186121 | 18186249 | 18186121 | ID=Msa1012740-mRNA-1:exon:4533;Parent=Msa1012740-mRNA-1 |
| chr7_1 | exon | 18186333 | 18186425 | 18186333 | ID=Msa1012740-mRNA-1:exon:4534;Parent=Msa1012740-mRNA-1 |
| chr7_1 | exon | 18186529 | 18186951 | 18186529 | ID=Msa1012740-mRNA-1:exon:4535;Parent=Msa1012740-mRNA-1 |
| chr7_1 | five_prime_UTR | 18184153 | 18184265 | 18184153 | ID=Msa1012740-mRNA-1:five_prime_utr;Parent=Msa1012740-mRNA-1 |
| chr7_1 | CDS | 18184266 | 18184268 | 18184266 | ID=Msa1012740-mRNA-1:cds;Parent=Msa1012740-mRNA-1 |
| chr7_1 | CDS | 18184373 | 18184628 | 18184373 | ID=Msa1012740-mRNA-1:cds;Parent=Msa1012740-mRNA-1 |
| chr7_1 | CDS | 18185851 | 18186020 | 18185851 | ID=Msa1012740-mRNA-1:cds;Parent=Msa1012740-mRNA-1 |
| chr7_1 | CDS | 18186121 | 18186249 | 18186121 | ID=Msa1012740-mRNA-1:cds;Parent=Msa1012740-mRNA-1 |
| chr7_1 | CDS | 18186333 | 18186425 | 18186333 | ID=Msa1012740-mRNA-1:cds;Parent=Msa1012740-mRNA-1 |
| chr7_1 | CDS | 18186529 | 18186660 | 18186529 | ID=Msa1012740-mRNA-1:cds;Parent=Msa1012740-mRNA-1 |
| chr7_1 | three_prime_UTR | 18186661 | 18186951 | 18186661 | ID=Msa1012740-mRNA-1:three_prime_utr;Parent=Msa1012740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
