Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059150 | XP_003622871.2 | 78.903 | 474 | 40 | 3 | 1 | 414 | 1 | 474 | 0.0 | 742 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059150 | G7L060 | 78.903 | 474 | 40 | 3 | 1 | 414 | 1 | 474 | 0.0 | 742 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1019550 | Msa1059150 | 0.870650 | 1.243119e-66 | -8.615850e-47 |
| Msa1059150 | Msa1150090 | 0.893985 | 3.771278e-75 | -8.615850e-47 |
| Msa1059150 | Msa1171210 | 0.883056 | 6.197304e-71 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059150 | MtrunA17_Chr7g0235041 | 78.903 | 474 | 40 | 3 | 1 | 414 | 1 | 474 | 0.0 | 742 |
| Msa1059150 | MtrunA17_Chr7g0235031 | 62.500 | 464 | 109 | 7 | 1 | 404 | 1 | 459 | 0.0 | 535 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059150 | AT4G13030.1 | 34.286 | 455 | 196 | 19 | 50 | 414 | 37 | 478 | 4.75e-58 | 197 |
| Msa1059150 | AT4G13030.3 | 34.286 | 455 | 196 | 19 | 50 | 414 | 38 | 479 | 4.85e-58 | 197 |
| Msa1059150 | AT4G13030.2 | 34.286 | 455 | 196 | 19 | 50 | 414 | 35 | 476 | 5.73e-58 | 197 |
Find 100 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATCTTGGGTTCATTTAT+AGG | 0.161868 | 7_2:-44910445 | None:intergenic |
| CTTTATCTTGGGTTCCCTTT+TGG | 0.172518 | 7_2:-44910488 | None:intergenic |
| GAGAAGAATGAATTAGATTT+TGG | 0.183844 | 7_2:+44906701 | Msa1059150:CDS |
| AGCTCGTGTCCGTGTATATT+TGG | 0.194089 | 7_2:+44909726 | Msa1059150:CDS |
| CATAACTTTGCAGGATTTCT+TGG | 0.236620 | 7_2:-44906802 | None:intergenic |
| TCTTATTAGGTAAGTTCTTT+AGG | 0.238635 | 7_2:+44910803 | Msa1059150:three_prime_UTR |
| GAAAAGCAATGTTATGAATA+AGG | 0.244087 | 7_2:+44909974 | Msa1059150:CDS |
| TCAATTCATCATAACTTTGC+AGG | 0.278671 | 7_2:-44906811 | None:intergenic |
| CATCATTGTTATAATGTAAA+TGG | 0.280008 | 7_2:-44910977 | None:intergenic |
| ATGTAACCCAGTTCTTTAAA+AGG | 0.290049 | 7_2:-44910845 | None:intergenic |
| GCTCGTGTCCGTGTATATTT+GGG | 0.308632 | 7_2:+44909727 | Msa1059150:CDS |
| ATTTAATATAATACACATAA+TGG | 0.316117 | 7_2:-44911014 | None:intergenic |
| CTGAATGTGATTGAAAATTC+TGG | 0.329930 | 7_2:+44908248 | Msa1059150:CDS |
| AAAACTGAAAGTTCCTAAAA+AGG | 0.336316 | 7_2:+44910516 | Msa1059150:CDS |
| TATGTTATATGTGTCCTTAA+TGG | 0.342707 | 7_2:+44908215 | Msa1059150:CDS |
| TCTGCTACTGATTCTGTTGT+CGG | 0.342857 | 7_2:+44906755 | Msa1059150:CDS |
| TTTATAGGACCTTCCACATT+TGG | 0.344558 | 7_2:-44910430 | None:intergenic |
| CAGATTTGGACACTCTATCT+TGG | 0.345258 | 7_2:-44910458 | None:intergenic |
| CTTGGTCACCAGTACTTACT+AGG | 0.347004 | 7_2:+44910910 | Msa1059150:three_prime_UTR |
| AGGTGAAAAGAGTTGTAATT+AGG | 0.349852 | 7_2:+44910628 | Msa1059150:three_prime_UTR |
| ATAATAAAATGCTCAAGAAT+TGG | 0.359391 | 7_2:+44907986 | Msa1059150:CDS |
| TGAAAATTCTGGTGGTGCTT+TGG | 0.359422 | 7_2:+44908259 | Msa1059150:CDS |
| CAAGATAGAGTGTCCAAATC+TGG | 0.362124 | 7_2:+44910459 | Msa1059150:CDS |
| CAGATAGAATTTGAGTCTCT+TGG | 0.362225 | 7_2:-44907922 | None:intergenic |
| TTGAACTGAATTCAATTCAA+TGG | 0.362858 | 7_2:-44905531 | None:intergenic |
| CAGGGATAGTCGAGGTTTGC+AGG | 0.366338 | 7_2:+44906658 | Msa1059150:intron |
| ATGTGTCCTTAATGGTGTTT+CGG | 0.368074 | 7_2:+44908223 | Msa1059150:CDS |
| TCAGAACCGAAACACCATTA+AGG | 0.375881 | 7_2:-44908229 | None:intergenic |
| AGATTTGGACACTCTATCTT+GGG | 0.383689 | 7_2:-44910457 | None:intergenic |
| AAGGAAAGTGAAAATCTTCA+TGG | 0.389477 | 7_2:-44905701 | None:intergenic |
| CTAGTATATGATCTCTGTTA+TGG | 0.413746 | 7_2:+44910601 | Msa1059150:three_prime_UTR |
| TGAACTGAATTCAATTCAAT+GGG | 0.414703 | 7_2:-44905530 | None:intergenic |
| GAGCTCGGTCAGAGAGTGAT+AGG | 0.419869 | 7_2:-44909708 | None:intergenic |
| TACCTTTAAAAGACAGGAAT+GGG | 0.433374 | 7_2:-44908322 | None:intergenic |
| CAAATTCTCTATCAGGGGTA+TGG | 0.434045 | 7_2:+44908112 | Msa1059150:intron |
| CTAGCAATAGGATTTGTCAT+TGG | 0.434697 | 7_2:+44910319 | Msa1059150:CDS |
| AGATAGAGTGGCATAAAATT+CGG | 0.438343 | 7_2:+44910545 | Msa1059150:CDS |
| GTATCAGCAAAATCATGAAT+AGG | 0.443249 | 7_2:-44910297 | None:intergenic |
| CTACTGCAAGTGTGCGGTTG+AGG | 0.446262 | 7_2:-44910388 | None:intergenic |
| GGCATAAAATTCGGCACATA+TGG | 0.446865 | 7_2:+44910554 | Msa1059150:CDS |
| TCCACTGATTCTAACCATAC+TGG | 0.457218 | 7_2:+44905601 | Msa1059150:CDS |
| CTCAAGAATTGGATGACAAA+AGG | 0.457854 | 7_2:+44907997 | Msa1059150:CDS |
| TGAGAGTGATGGTGGATTGT+GGG | 0.457977 | 7_2:+44910883 | Msa1059150:three_prime_UTR |
| CTTCTTCTCCACCCACTCCC+AGG | 0.466904 | 7_2:+44905721 | Msa1059150:CDS |
| TAGTTGGCCCTAGTAAGTAC+TGG | 0.471735 | 7_2:-44910918 | None:intergenic |
| CTGGGAGTGGGTGGAGAAGA+AGG | 0.473521 | 7_2:-44905720 | None:intergenic |
| ATGAGAGTGATGGTGGATTG+TGG | 0.477204 | 7_2:+44910882 | Msa1059150:three_prime_UTR |
| AGAAAATACCTTTAAAAGAC+AGG | 0.478362 | 7_2:-44908328 | None:intergenic |
| GTGACTGAATCTGCCGTAGT+TGG | 0.478664 | 7_2:+44909906 | Msa1059150:CDS |
| CAAATCTGGAAGTTCCCAAA+AGG | 0.478710 | 7_2:+44910473 | Msa1059150:CDS |
| ATCATCATCATCATTCATCA+TGG | 0.481452 | 7_2:+44905570 | Msa1059150:exon |
| GAGTTGTAATTAGGAGTACT+TGG | 0.485433 | 7_2:+44910637 | Msa1059150:three_prime_UTR |
| AAGCTTAAAGGTGACAAGAA+AGG | 0.490372 | 7_2:+44908161 | Msa1059150:CDS |
| AAATTCTGGTGGTGCTTTGG+AGG | 0.492221 | 7_2:+44908262 | Msa1059150:CDS |
| AGAGACAACATGCCTCATAC+TGG | 0.492904 | 7_2:+44907630 | Msa1059150:intron |
| CCATGAGTTAAAACAAGTAC+AGG | 0.493295 | 7_2:-44909679 | None:intergenic |
| TGAATTGAAGATTGATAGCA+AGG | 0.493305 | 7_2:+44906826 | Msa1059150:CDS |
| GATAATTCACTTGGAGGGAG+TGG | 0.495377 | 7_2:+44907871 | Msa1059150:intron |
| TGGTGGATTGTGGGACTCCT+TGG | 0.496328 | 7_2:+44910892 | Msa1059150:three_prime_UTR |
| AGAAGTTAGTGAAGAAAGTG+TGG | 0.500315 | 7_2:+44906724 | Msa1059150:CDS |
| GTCATGGAGAGCTTGTTGCC+AGG | 0.504453 | 7_2:+44908025 | Msa1059150:CDS |
| ATGATCTCTGTTATGGAGCT+AGG | 0.505275 | 7_2:+44910608 | Msa1059150:three_prime_UTR |
| CTGGTGGTGCTTTGGAGGCA+CGG | 0.508561 | 7_2:+44908267 | Msa1059150:CDS |
| ACCAGTATGGTTAGAATCAG+TGG | 0.509955 | 7_2:-44905602 | None:intergenic |
| GTATGATACACGTAGTTTGT+CGG | 0.510788 | 7_2:+44907948 | Msa1059150:CDS |
| CACTTGGACCAACCAGTATG+AGG | 0.522542 | 7_2:-44907642 | None:intergenic |
| CTGATTCTGTTGTCGGTGAA+AGG | 0.525217 | 7_2:+44906762 | Msa1059150:CDS |
| ATGGCAGATAATTCACTTGG+AGG | 0.534040 | 7_2:+44907865 | Msa1059150:intron |
| TCACGACACGCGTCCAAATG+TGG | 0.541487 | 7_2:+44910417 | Msa1059150:CDS |
| AATATACACGGACACGAGCT+CGG | 0.542671 | 7_2:-44909723 | None:intergenic |
| ATACCTTTAAAAGACAGGAA+TGG | 0.550299 | 7_2:-44908323 | None:intergenic |
| TTGATGGCAGATAATTCACT+TGG | 0.556082 | 7_2:+44907862 | Msa1059150:intron |
| AAATCTGGAAGTTCCCAAAA+GGG | 0.558483 | 7_2:+44910474 | Msa1059150:CDS |
| TGCTTTGGTAGTTCTGTACA+CGG | 0.562614 | 7_2:+44910713 | Msa1059150:three_prime_UTR |
| CTGCAGTGTTGTCAATTCAA+TGG | 0.574835 | 7_2:-44910663 | None:intergenic |
| CTACGGCAGATTCAGTCACT+AGG | 0.577978 | 7_2:-44909902 | None:intergenic |
| TGGCAGATAATTCACTTGGA+GGG | 0.579251 | 7_2:+44907866 | Msa1059150:intron |
| ATGACAAAAGGTGTTCGTCA+TGG | 0.590159 | 7_2:+44908009 | Msa1059150:CDS |
| TGAGTATATGAGAGTGATGG+TGG | 0.592459 | 7_2:+44910875 | Msa1059150:three_prime_UTR |
| TCATCATCATCATTCATCAT+GGG | 0.597108 | 7_2:+44905571 | Msa1059150:exon |
| AAAAGGAAGCCAAGATAGAG+TGG | 0.597198 | 7_2:+44910533 | Msa1059150:CDS |
| TGATGATATATACCTGGGAG+TGG | 0.598814 | 7_2:-44905733 | None:intergenic |
| TCATCATTCATCATGGGCGG+TGG | 0.599969 | 7_2:+44905577 | Msa1059150:exon |
| ATATCTTAACATTCCAACTA+CGG | 0.604056 | 7_2:-44909919 | None:intergenic |
| GATATATACCTGGGAGTGGG+TGG | 0.609726 | 7_2:-44905729 | None:intergenic |
| CTCGTGTCCGTGTATATTTG+GGG | 0.610233 | 7_2:+44909728 | Msa1059150:CDS |
| TTGGTCACCAGTACTTACTA+GGG | 0.622670 | 7_2:+44910911 | Msa1059150:three_prime_UTR |
| CTGTTGAGCGACATAAGTGA+TGG | 0.622726 | 7_2:-44910359 | None:intergenic |
| GTCGGTGAAAGGAAGAGACT+TGG | 0.627757 | 7_2:+44906773 | Msa1059150:CDS |
| TAATGTTTCAGGGATAGTCG+AGG | 0.642098 | 7_2:+44906650 | Msa1059150:intron |
| CTAGTAAGTACTGGTGACCA+AGG | 0.642666 | 7_2:-44910909 | None:intergenic |
| GACACGCGTCCAAATGTGGA+AGG | 0.661616 | 7_2:+44910421 | Msa1059150:CDS |
| TCATCATCATTCATCATGGG+CGG | 0.664119 | 7_2:+44905574 | Msa1059150:exon |
| TGTACAGAACTACCAAAGCA+AGG | 0.665366 | 7_2:-44910710 | None:intergenic |
| TCGTGTCCGTGTATATTTGG+GGG | 0.675383 | 7_2:+44909729 | Msa1059150:CDS |
| AACTGAGTATATGAGAGTGA+TGG | 0.683513 | 7_2:+44910872 | Msa1059150:three_prime_UTR |
| ACTTCTCTACTGCAAGTGTG+CGG | 0.699580 | 7_2:-44910394 | None:intergenic |
| TTGGAATCATATACTCACGA+AGG | 0.702077 | 7_2:-44907903 | None:intergenic |
| AATGTGATTGAAAATTCTGG+TGG | 0.703440 | 7_2:+44908251 | Msa1059150:CDS |
| GATGATATATACCTGGGAGT+GGG | 0.703785 | 7_2:-44905732 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTCTTTTTTTTTTTTTTTT+TGG | - | chr7_2:44905399-44905418 | None:intergenic | 10.0% |
| !! | ATAAGATTCAATATAATTAT+GGG | + | chr7_2:44905899-44905918 | Msa1059150:intron | 10.0% |
| !! | TTAATTGAAAAAATGAATTT+AGG | + | chr7_2:44907125-44907144 | Msa1059150:intron | 10.0% |
| !!! | AACTTTTAAATTAAAGTTAT+AGG | + | chr7_2:44908534-44908553 | Msa1059150:intron | 10.0% |
| !! | ATTTAATATAATACACATAA+TGG | - | chr7_2:44911017-44911036 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAGAGTTAG+CGG | + | chr7_2:44905402-44905421 | Msa1059150:five_prime_UTR | 15.0% |
| !!! | AAATATTTTTGGAAAAAGAA+AGG | - | chr7_2:44905790-44905809 | None:intergenic | 15.0% |
| !!! | TGATTTTTTCAAATTATAAG+CGG | - | chr7_2:44905859-44905878 | None:intergenic | 15.0% |
| !! | CATAAGATTCAATATAATTA+TGG | + | chr7_2:44905898-44905917 | Msa1059150:intron | 15.0% |
| !!! | TATTTTTGCACAAATTTATT+TGG | - | chr7_2:44905990-44906009 | None:intergenic | 15.0% |
| !! | ATACATTAAAAAACAGAAAT+AGG | - | chr7_2:44906034-44906053 | None:intergenic | 15.0% |
| !!! | AATATATCTTTTTTGATAAG+TGG | - | chr7_2:44906132-44906151 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTTTATTGTCA+TGG | + | chr7_2:44907240-44907259 | Msa1059150:intron | 15.0% |
| !!! | TGATATTAACTTGAATAATT+AGG | + | chr7_2:44907773-44907792 | Msa1059150:intron | 15.0% |
| !! | AATGAACAAATATATATAGA+TGG | - | chr7_2:44907812-44907831 | None:intergenic | 15.0% |
| !! | ACTAGTTATCATAAAATAAA+CGG | - | chr7_2:44908453-44908472 | None:intergenic | 15.0% |
| !! | TTAAATTAAAGTTATAGGAA+TGG | + | chr7_2:44908539-44908558 | Msa1059150:intron | 15.0% |
| !!! | TATATTAAACGTTGTATTTT+AGG | - | chr7_2:44908569-44908588 | None:intergenic | 15.0% |
| !!! | AATCTAAAATCTTATTAGTT+TGG | + | chr7_2:44908686-44908705 | Msa1059150:intron | 15.0% |
| !! | TTAATGTATATGTATGTATT+AGG | + | chr7_2:44909086-44909105 | Msa1059150:intron | 15.0% |
| !! | TATATAAATGTAAACAATTC+CGG | + | chr7_2:44909342-44909361 | Msa1059150:intron | 15.0% |
| !!! | AGTAAAATTTGCTTATATTT+TGG | + | chr7_2:44910116-44910135 | Msa1059150:intron | 15.0% |
| !! | AACAATTAAAAAAATCAATG+AGG | - | chr7_2:44910246-44910265 | None:intergenic | 15.0% |
| !!! | TCAATTAACTTTTTCTTATT+AGG | + | chr7_2:44910790-44910809 | Msa1059150:three_prime_UTR | 15.0% |
| !!! | TGATAGGTTGAAAATATTTT+TGG | - | chr7_2:44905801-44905820 | None:intergenic | 20.0% |
| !! | AAAAATAGATTGTATTTGGA+GGG | + | chr7_2:44906003-44906022 | Msa1059150:intron | 20.0% |
| !!! | TTTTTAAGATTTTTTGCTAC+TGG | + | chr7_2:44906064-44906083 | Msa1059150:intron | 20.0% |
| !! | TTGCAATAAAAATAGGTTTA+GGG | - | chr7_2:44906280-44906299 | None:intergenic | 20.0% |
| !! | TTTGCAATAAAAATAGGTTT+AGG | - | chr7_2:44906281-44906300 | None:intergenic | 20.0% |
| !! | ATGATGATTTATAATGTTTC+AGG | + | chr7_2:44906639-44906658 | Msa1059150:intron | 20.0% |
| !! | TGATGATTTATAATGTTTCA+GGG | + | chr7_2:44906640-44906659 | Msa1059150:intron | 20.0% |
| !! | GCTTAATATTAAGACATATA+TGG | - | chr7_2:44906926-44906945 | None:intergenic | 20.0% |
| !!! | AAAGGGTATATTATTATCTA+AGG | + | chr7_2:44906997-44907016 | Msa1059150:intron | 20.0% |
| !! | AACAAATATATATAGATGGA+AGG | - | chr7_2:44907808-44907827 | None:intergenic | 20.0% |
| !! | ATAATAAAATGCTCAAGAAT+TGG | + | chr7_2:44907986-44908005 | Msa1059150:CDS | 20.0% |
| !! | AGTACTTAAATATATAAACC+TGG | - | chr7_2:44908046-44908065 | None:intergenic | 20.0% |
| !!! | ATTTTACAAATTCTCTATCA+GGG | + | chr7_2:44908106-44908125 | Msa1059150:intron | 20.0% |
| !!! | AGTAAAAATTTGAAGCTTAA+AGG | + | chr7_2:44908149-44908168 | Msa1059150:CDS | 20.0% |
| !! | TTAAAAACTTTCATGAAGAA+TGG | - | chr7_2:44908925-44908944 | None:intergenic | 20.0% |
| !! | GGAATTGTTTACATTTATAT+AGG | - | chr7_2:44909343-44909362 | None:intergenic | 20.0% |
| !! | CATTGAAATAATTGAAAGAA+GGG | - | chr7_2:44909392-44909411 | None:intergenic | 20.0% |
| !! | ACATTGAAATAATTGAAAGA+AGG | - | chr7_2:44909393-44909412 | None:intergenic | 20.0% |
| !! | TAAAAGAATGTTCAATGAAA+GGG | - | chr7_2:44909825-44909844 | None:intergenic | 20.0% |
| !! | ATAAAAGAATGTTCAATGAA+AGG | - | chr7_2:44909826-44909845 | None:intergenic | 20.0% |
| !! | AGCTTGTAACTATAAATTTA+AGG | - | chr7_2:44910012-44910031 | None:intergenic | 20.0% |
| !!! | AACAAATAACTACTTTTAGT+TGG | - | chr7_2:44910937-44910956 | None:intergenic | 20.0% |
| !! | CATCATTGTTATAATGTAAA+TGG | - | chr7_2:44910980-44910999 | None:intergenic | 20.0% |
| ! | TAAGAACGAACAAAAAAATG+AGG | - | chr7_2:44905475-44905494 | None:intergenic | 25.0% |
| ! | TGAACTGAATTCAATTCAAT+GGG | - | chr7_2:44905533-44905552 | None:intergenic | 25.0% |
| ! | TTGAACTGAATTCAATTCAA+TGG | - | chr7_2:44905534-44905553 | None:intergenic | 25.0% |
| ! | AAGAAAAACAAATACCAGTA+TGG | - | chr7_2:44905618-44905637 | None:intergenic | 25.0% |
| !! | AGAGTATCTGATTAATCATT+AGG | - | chr7_2:44905681-44905700 | None:intergenic | 25.0% |
| ! | AATTTATTTGGTTGAAAGCA+CGG | - | chr7_2:44905978-44905997 | None:intergenic | 25.0% |
| ! | GTGCAAAAATAGATTGTATT+TGG | + | chr7_2:44905999-44906018 | Msa1059150:intron | 25.0% |
| ! | CAAAAATAGATTGTATTTGG+AGG | + | chr7_2:44906002-44906021 | Msa1059150:intron | 25.0% |
| !! | TGGCTTTTATATTCTTAGTT+TGG | + | chr7_2:44906084-44906103 | Msa1059150:intron | 25.0% |
| !! | TTATGTGAAACATGTTTTGT+AGG | + | chr7_2:44906530-44906549 | Msa1059150:intron | 25.0% |
| ! | ACTATAGGATCAAGAAATAA+AGG | - | chr7_2:44906592-44906611 | None:intergenic | 25.0% |
| !! | GAGAAGAATGAATTAGATTT+TGG | + | chr7_2:44906701-44906720 | Msa1059150:CDS | 25.0% |
| !! | AAAAAATGAATTTAGGACTC+AGG | + | chr7_2:44907132-44907151 | Msa1059150:intron | 25.0% |
| !!! | GCTTTTTCTTACATAAATCA+AGG | - | chr7_2:44907189-44907208 | None:intergenic | 25.0% |
| ! | AAGTCATCAAAACTAATCTA+GGG | - | chr7_2:44907315-44907334 | None:intergenic | 25.0% |
| ! | TAAGTCATCAAAACTAATCT+AGG | - | chr7_2:44907316-44907335 | None:intergenic | 25.0% |
| ! | TCAGTGTGTAATTGAAATTA+TGG | + | chr7_2:44907439-44907458 | Msa1059150:intron | 25.0% |
| ! | TATATTTGTTCATTGACCTA+AGG | + | chr7_2:44907818-44907837 | Msa1059150:intron | 25.0% |
| ! | CCATCAAAAGATAAATGTAA+TGG | - | chr7_2:44907849-44907868 | None:intergenic | 25.0% |
| !! | CCATTACATTTATCTTTTGA+TGG | + | chr7_2:44907846-44907865 | Msa1059150:intron | 25.0% |
| !! | CATTTTACAAATTCTCTATC+AGG | + | chr7_2:44908105-44908124 | Msa1059150:intron | 25.0% |
| !! | TTTTACAAATTCTCTATCAG+GGG | + | chr7_2:44908107-44908126 | Msa1059150:intron | 25.0% |
| !! | ATTAACTTTTCTTCGTTTAC+TGG | - | chr7_2:44908195-44908214 | None:intergenic | 25.0% |
| ! | TATGTTATATGTGTCCTTAA+TGG | + | chr7_2:44908215-44908234 | Msa1059150:CDS | 25.0% |
| !! | AGAAAATACCTTTAAAAGAC+AGG | - | chr7_2:44908331-44908350 | None:intergenic | 25.0% |
| !!! | TGTCTTTTAAAGGTATTTTC+TGG | + | chr7_2:44908330-44908349 | Msa1059150:intron | 25.0% |
| ! | GCAAATGAAAAAGAAAAAAG+TGG | - | chr7_2:44908405-44908424 | None:intergenic | 25.0% |
| !! | TTTTCTCTTTCACATTTTTC+AGG | - | chr7_2:44909119-44909138 | None:intergenic | 25.0% |
| ! | ACGTTTAATTAACAGAATGT+TGG | + | chr7_2:44909149-44909168 | Msa1059150:intron | 25.0% |
| ! | CGTTTAATTAACAGAATGTT+GGG | + | chr7_2:44909150-44909169 | Msa1059150:intron | 25.0% |
| ! | ATGAGAAAGATAGAAATACA+GGG | - | chr7_2:44909200-44909219 | None:intergenic | 25.0% |
| ! | AATGAGAAAGATAGAAATAC+AGG | - | chr7_2:44909201-44909220 | None:intergenic | 25.0% |
| ! | ACCAAAATTCACTCTATTAT+CGG | - | chr7_2:44909285-44909304 | None:intergenic | 25.0% |
| ! | AATATTCATGTCAAAGAAAC+TGG | - | chr7_2:44909314-44909333 | None:intergenic | 25.0% |
| ! | AGAGACTCAATTAGATAAAT+TGG | + | chr7_2:44909490-44909509 | Msa1059150:intron | 25.0% |
| ! | GAGACTCAATTAGATAAATT+GGG | + | chr7_2:44909491-44909510 | Msa1059150:intron | 25.0% |
| ! | AATTGGGAGAAATAGTAAAA+AGG | + | chr7_2:44909507-44909526 | Msa1059150:intron | 25.0% |
| ! | AAATTCAGAAGTTTGTATGA+AGG | + | chr7_2:44909541-44909560 | Msa1059150:intron | 25.0% |
| ! | AATTCAGAAGTTTGTATGAA+GGG | + | chr7_2:44909542-44909561 | Msa1059150:intron | 25.0% |
| ! | ATATCTTAACATTCCAACTA+CGG | - | chr7_2:44909922-44909941 | None:intergenic | 25.0% |
| ! | GAAAAGCAATGTTATGAATA+AGG | + | chr7_2:44909974-44909993 | Msa1059150:CDS | 25.0% |
| ! | AAGCAAAAAATGTAGTTTGA+TGG | - | chr7_2:44910143-44910162 | None:intergenic | 25.0% |
| !!! | TTTTTAGGAACTTTCAGTTT+TGG | - | chr7_2:44910517-44910536 | None:intergenic | 25.0% |
| ! | AAAACTGAAAGTTCCTAAAA+AGG | + | chr7_2:44910516-44910535 | Msa1059150:CDS | 25.0% |
| ! | TCTAAAAAGACTTTCTACTT+TGG | - | chr7_2:44910746-44910765 | None:intergenic | 25.0% |
| ! | TCTTATTAGGTAAGTTCTTT+AGG | + | chr7_2:44910803-44910822 | Msa1059150:three_prime_UTR | 25.0% |
| ATCATCATCATCATTCATCA+TGG | + | chr7_2:44905570-44905589 | Msa1059150:exon | 30.0% | |
| TCATCATCATCATTCATCAT+GGG | + | chr7_2:44905571-44905590 | Msa1059150:exon | 30.0% | |
| AACACAAGAATTCATCAAAG+AGG | - | chr7_2:44905655-44905674 | None:intergenic | 30.0% | |
| AAGGAAAGTGAAAATCTTCA+TGG | - | chr7_2:44905704-44905723 | None:intergenic | 30.0% | |
| AACAACACTAAGTTTCTGTT+AGG | - | chr7_2:44906475-44906494 | None:intergenic | 30.0% | |
| ! | AGTGTTGTTGATATAATGCA+TGG | + | chr7_2:44906486-44906505 | Msa1059150:intron | 30.0% |
| ! | TGATATAATGCATGGCATTT+TGG | + | chr7_2:44906494-44906513 | Msa1059150:intron | 30.0% |
| TCAATTCATCATAACTTTGC+AGG | - | chr7_2:44906814-44906833 | None:intergenic | 30.0% | |
| ! | TGAATTGAAGATTGATAGCA+AGG | + | chr7_2:44906826-44906845 | Msa1059150:CDS | 30.0% |
| AAGCCAAAGAAAAAATCTTG+AGG | + | chr7_2:44906858-44906877 | Msa1059150:CDS | 30.0% | |
| !!! | ACACCTCAAGATTTTTTCTT+TGG | - | chr7_2:44906864-44906883 | None:intergenic | 30.0% |
| ATATTAAGCGAAAGCTTCAA+AGG | + | chr7_2:44906937-44906956 | Msa1059150:intron | 30.0% | |
| TTCAGCTTTCAAACATTGAA+AGG | + | chr7_2:44906979-44906998 | Msa1059150:intron | 30.0% | |
| TCAGCTTTCAAACATTGAAA+GGG | + | chr7_2:44906980-44906999 | Msa1059150:intron | 30.0% | |
| AGGTCAAAAACATGAATTTC+AGG | + | chr7_2:44907152-44907171 | Msa1059150:intron | 30.0% | |
| TGTCATGGAAATAGTATTAC+AGG | + | chr7_2:44907255-44907274 | Msa1059150:intron | 30.0% | |
| GTCATGGAAATAGTATTACA+GGG | + | chr7_2:44907256-44907275 | Msa1059150:intron | 30.0% | |
| TCATGGAAATAGTATTACAG+GGG | + | chr7_2:44907257-44907276 | Msa1059150:intron | 30.0% | |
| ! | AAATTTTGTATGTGAGCATG+TGG | + | chr7_2:44907496-44907515 | Msa1059150:intron | 30.0% |
| AGAATATGAAGTTTATCGTG+TGG | + | chr7_2:44907530-44907549 | Msa1059150:intron | 30.0% | |
| !! | AAATGTAATGGATACTCCTT+AGG | - | chr7_2:44907837-44907856 | None:intergenic | 30.0% |
| CTGAATGTGATTGAAAATTC+TGG | + | chr7_2:44908248-44908267 | Msa1059150:CDS | 30.0% | |
| AATGTGATTGAAAATTCTGG+TGG | + | chr7_2:44908251-44908270 | Msa1059150:CDS | 30.0% | |
| ! | TACCTTTAAAAGACAGGAAT+GGG | - | chr7_2:44908325-44908344 | None:intergenic | 30.0% |
| ! | ATACCTTTAAAAGACAGGAA+TGG | - | chr7_2:44908326-44908345 | None:intergenic | 30.0% |
| CAGATATAATGTGACACATA+TGG | + | chr7_2:44908500-44908519 | Msa1059150:intron | 30.0% | |
| ATATAATGTGACACATATGG+AGG | + | chr7_2:44908503-44908522 | Msa1059150:intron | 30.0% | |
| TATAATGTGACACATATGGA+GGG | + | chr7_2:44908504-44908523 | Msa1059150:intron | 30.0% | |
| TTGTATAATTGACCTATGCT+TGG | + | chr7_2:44908752-44908771 | Msa1059150:intron | 30.0% | |
| ATCTTAGTGTTAACGTTGAA+CGG | + | chr7_2:44908775-44908794 | Msa1059150:intron | 30.0% | |
| AAACTATCCTACCTTGTATT+CGG | + | chr7_2:44908869-44908888 | Msa1059150:intron | 30.0% | |
| AAGGAAATAACACAAGTGTA+TGG | - | chr7_2:44908978-44908997 | None:intergenic | 30.0% | |
| TAATTAACAGAATGTTGGGA+TGG | + | chr7_2:44909154-44909173 | Msa1059150:intron | 30.0% | |
| AATTAACAGAATGTTGGGAT+GGG | + | chr7_2:44909155-44909174 | Msa1059150:intron | 30.0% | |
| ! | TAGAAATACAGGGTTTTCAA+GGG | - | chr7_2:44909190-44909209 | None:intergenic | 30.0% |
| ! | ATAGAAATACAGGGTTTTCA+AGG | - | chr7_2:44909191-44909210 | None:intergenic | 30.0% |
| TTTACGGTATAACTATCGAA+AGG | - | chr7_2:44909230-44909249 | None:intergenic | 30.0% | |
| TAACAGAAAGCAGTGATTTA+CGG | - | chr7_2:44909246-44909265 | None:intergenic | 30.0% | |
| ! | ACCGATAATAGAGTGAATTT+TGG | + | chr7_2:44909281-44909300 | Msa1059150:intron | 30.0% |
| ! | ATGTCAAAAATTTGCTCTGT+CGG | - | chr7_2:44909772-44909791 | None:intergenic | 30.0% |
| !! | TTCATAACATTGCTTTTCTG+AGG | - | chr7_2:44909972-44909991 | None:intergenic | 30.0% |
| TTGATATAACTGAGTGCAAT+AGG | + | chr7_2:44910053-44910072 | Msa1059150:intron | 30.0% | |
| TGATATAACTGAGTGCAATA+GGG | + | chr7_2:44910054-44910073 | Msa1059150:intron | 30.0% | |
| ATTTCTCAAACAGTGACTAA+AGG | + | chr7_2:44910205-44910224 | Msa1059150:intron | 30.0% | |
| !! | TTTTAATTGTTCATGCTTGC+AGG | + | chr7_2:44910255-44910274 | Msa1059150:intron | 30.0% |
| GTATCAGCAAAATCATGAAT+AGG | - | chr7_2:44910300-44910319 | None:intergenic | 30.0% | |
| ! | ATTTTGCTGATACTAGCAAT+AGG | + | chr7_2:44910307-44910326 | Msa1059150:CDS | 30.0% |
| TCTATCTTGGGTTCATTTAT+AGG | - | chr7_2:44910448-44910467 | None:intergenic | 30.0% | |
| ! | AATTTTATGCCACTCTATCT+TGG | - | chr7_2:44910545-44910564 | None:intergenic | 30.0% |
| AGATAGAGTGGCATAAAATT+CGG | + | chr7_2:44910545-44910564 | Msa1059150:CDS | 30.0% | |
| CTAGTATATGATCTCTGTTA+TGG | + | chr7_2:44910601-44910620 | Msa1059150:three_prime_UTR | 30.0% | |
| AGGTGAAAAGAGTTGTAATT+AGG | + | chr7_2:44910628-44910647 | Msa1059150:three_prime_UTR | 30.0% | |
| ATGTAACCCAGTTCTTTAAA+AGG | - | chr7_2:44910848-44910867 | None:intergenic | 30.0% | |
| AGCAGTGATGATATATACCT+GGG | - | chr7_2:44905741-44905760 | None:intergenic | 35.0% | |
| AAGCAGTGATGATATATACC+TGG | - | chr7_2:44905742-44905761 | None:intergenic | 35.0% | |
| ! | GGTTTAGGGTTATTAAGTTC+AGG | - | chr7_2:44906266-44906285 | None:intergenic | 35.0% |
| GGGAGGTTTGCAATAAAAAT+AGG | - | chr7_2:44906287-44906306 | None:intergenic | 35.0% | |
| !! | TAGACTAGCTTCTTGCTTAA+GGG | - | chr7_2:44906307-44906326 | None:intergenic | 35.0% |
| !! | TTAGACTAGCTTCTTGCTTA+AGG | - | chr7_2:44906308-44906327 | None:intergenic | 35.0% |
| ATGGTTCCAAACGTATACTA+AGG | - | chr7_2:44906337-44906356 | None:intergenic | 35.0% | |
| ! | TTGTAGGATCAGTGCTTTTA+AGG | + | chr7_2:44906546-44906565 | Msa1059150:intron | 35.0% |
| CGAATGCTAATGTCAACTAT+AGG | - | chr7_2:44906607-44906626 | None:intergenic | 35.0% | |
| AGAAGTTAGTGAAGAAAGTG+TGG | + | chr7_2:44906724-44906743 | Msa1059150:CDS | 35.0% | |
| CATAACTTTGCAGGATTTCT+TGG | - | chr7_2:44906805-44906824 | None:intergenic | 35.0% | |
| TCATCCAATGAAGCATGTAA+GGG | - | chr7_2:44907405-44907424 | None:intergenic | 35.0% | |
| TTCATCCAATGAAGCATGTA+AGG | - | chr7_2:44907406-44907425 | None:intergenic | 35.0% | |
| ! | AAGAGCACAAGTATCATGTA+CGG | + | chr7_2:44907732-44907751 | Msa1059150:intron | 35.0% |
| ! | TTGATGGCAGATAATTCACT+TGG | + | chr7_2:44907862-44907881 | Msa1059150:intron | 35.0% |
| TTGGAATCATATACTCACGA+AGG | - | chr7_2:44907906-44907925 | None:intergenic | 35.0% | |
| CAGATAGAATTTGAGTCTCT+TGG | - | chr7_2:44907925-44907944 | None:intergenic | 35.0% | |
| ! | GTATGATACACGTAGTTTGT+CGG | + | chr7_2:44907948-44907967 | Msa1059150:CDS | 35.0% |
| CTCAAGAATTGGATGACAAA+AGG | + | chr7_2:44907997-44908016 | Msa1059150:CDS | 35.0% | |
| AAGCTTAAAGGTGACAAGAA+AGG | + | chr7_2:44908161-44908180 | Msa1059150:CDS | 35.0% | |
| ATGTGTCCTTAATGGTGTTT+CGG | + | chr7_2:44908223-44908242 | Msa1059150:CDS | 35.0% | |
| TATTTAGCCTCAACTATTGG+TGG | - | chr7_2:44908644-44908663 | None:intergenic | 35.0% | |
| CAGTATTTAGCCTCAACTAT+TGG | - | chr7_2:44908647-44908666 | None:intergenic | 35.0% | |
| GGCTAAATACTGTGATGATA+CGG | + | chr7_2:44908655-44908674 | Msa1059150:intron | 35.0% | |
| TAACACTAAGATCCAAGCAT+AGG | - | chr7_2:44908767-44908786 | None:intergenic | 35.0% | |
| ACGTTGAACGGTGATTTATA+AGG | + | chr7_2:44908787-44908806 | Msa1059150:intron | 35.0% | |
| ! | TATAAGGCCTTTTGATATGC+TGG | + | chr7_2:44908803-44908822 | Msa1059150:intron | 35.0% |
| GTAATCACCAGCATATCAAA+AGG | - | chr7_2:44908813-44908832 | None:intergenic | 35.0% | |
| TTCCAATCATTAAATGCTGC+AGG | + | chr7_2:44908834-44908853 | Msa1059150:intron | 35.0% | |
| AACCTGCAGCATTTAATGAT+TGG | - | chr7_2:44908839-44908858 | None:intergenic | 35.0% | |
| TCATTAAATGCTGCAGGTTT+AGG | + | chr7_2:44908840-44908859 | Msa1059150:intron | 35.0% | |
| TAACAGTCATTGTGACAATG+TGG | + | chr7_2:44908942-44908961 | Msa1059150:intron | 35.0% | |
| AACAGTCATTGTGACAATGT+GGG | + | chr7_2:44908943-44908962 | Msa1059150:intron | 35.0% | |
| !! | CACTTGTGTTATTTCCTTTC+AGG | + | chr7_2:44908980-44908999 | Msa1059150:intron | 35.0% |
| !!! | TCTTTCACATTTTTCAGGCA+TGG | - | chr7_2:44909114-44909133 | None:intergenic | 35.0% |
| AAATGTAAACAATTCCGGTG+TGG | + | chr7_2:44909347-44909366 | Msa1059150:intron | 35.0% | |
| TATGCCGCAAAAATAGTTTC+TGG | + | chr7_2:44909414-44909433 | Msa1059150:intron | 35.0% | |
| ATGCCGCAAAAATAGTTTCT+GGG | + | chr7_2:44909415-44909434 | Msa1059150:intron | 35.0% | |
| !!! | AGTCCCAGAAACTATTTTTG+CGG | - | chr7_2:44909421-44909440 | None:intergenic | 35.0% |
| !! | CAAAAATAGTTTCTGGGACT+TGG | + | chr7_2:44909421-44909440 | Msa1059150:intron | 35.0% |
| GTTTCTGTTCCTTTCATCAA+CGG | + | chr7_2:44909455-44909474 | Msa1059150:intron | 35.0% | |
| ! | AACTAAACACCGTTGATGAA+AGG | - | chr7_2:44909467-44909486 | None:intergenic | 35.0% |
| CTATTATGAACACATGCAAG+AGG | - | chr7_2:44909616-44909635 | None:intergenic | 35.0% | |
| CCATGAGTTAAAACAAGTAC+AGG | - | chr7_2:44909682-44909701 | None:intergenic | 35.0% | |
| !!! | CCTGTACTTGTTTTAACTCA+TGG | + | chr7_2:44909679-44909698 | Msa1059150:CDS | 35.0% |
| ATAACTCCCCCAAATATACA+CGG | - | chr7_2:44909738-44909757 | None:intergenic | 35.0% | |
| TGTATATTTGGGGGAGTTAT+TGG | + | chr7_2:44909738-44909757 | Msa1059150:CDS | 35.0% | |
| GTATATTTGGGGGAGTTATT+GGG | + | chr7_2:44909739-44909758 | Msa1059150:CDS | 35.0% | |
| AGAATGTTCAATGAAAGGGA+TGG | - | chr7_2:44909821-44909840 | None:intergenic | 35.0% | |
| !! | AGATAGAGTGTTTGATTTGG+TGG | - | chr7_2:44910176-44910195 | None:intergenic | 35.0% |
| ! | TCGAGATAGAGTGTTTGATT+TGG | - | chr7_2:44910179-44910198 | None:intergenic | 35.0% |
| CTAGCAATAGGATTTGTCAT+TGG | + | chr7_2:44910319-44910338 | Msa1059150:CDS | 35.0% | |
| TTTATAGGACCTTCCACATT+TGG | - | chr7_2:44910433-44910452 | None:intergenic | 35.0% | |
| AGATTTGGACACTCTATCTT+GGG | - | chr7_2:44910460-44910479 | None:intergenic | 35.0% | |
| AAATCTGGAAGTTCCCAAAA+GGG | + | chr7_2:44910474-44910493 | Msa1059150:CDS | 35.0% | |
| ! | TTTATCTTGGGTTCCCTTTT+GGG | - | chr7_2:44910490-44910509 | None:intergenic | 35.0% |
| !!! | AGTTTTGGACGCTTTATCTT+GGG | - | chr7_2:44910502-44910521 | None:intergenic | 35.0% |
| ! | TCTATCTTGGCTTCCTTTTT+AGG | - | chr7_2:44910532-44910551 | None:intergenic | 35.0% |
| !! | GAGTTGTAATTAGGAGTACT+TGG | + | chr7_2:44910637-44910656 | Msa1059150:three_prime_UTR | 35.0% |
| !! | ATCACTTTTGTTCCTTGCTT+TGG | + | chr7_2:44910698-44910717 | Msa1059150:three_prime_UTR | 35.0% |
| AACTGAGTATATGAGAGTGA+TGG | + | chr7_2:44910872-44910891 | Msa1059150:three_prime_UTR | 35.0% | |
| !!! | GAGGATTCTGTTTTTGATCG+TGG | - | chr7_2:44905456-44905475 | None:intergenic | 40.0% |
| TCATCATCATTCATCATGGG+CGG | + | chr7_2:44905574-44905593 | Msa1059150:exon | 40.0% | |
| !! | TCCACTGATTCTAACCATAC+TGG | + | chr7_2:44905601-44905620 | Msa1059150:CDS | 40.0% |
| ACCAGTATGGTTAGAATCAG+TGG | - | chr7_2:44905605-44905624 | None:intergenic | 40.0% | |
| GATGATATATACCTGGGAGT+GGG | - | chr7_2:44905735-44905754 | None:intergenic | 40.0% | |
| TGATGATATATACCTGGGAG+TGG | - | chr7_2:44905736-44905755 | None:intergenic | 40.0% | |
| ATAATTATGGGTGTCCGTGT+CGG | + | chr7_2:44905911-44905930 | Msa1059150:intron | 40.0% | |
| TGCTTCTGAACAAGCACTTA+TGG | + | chr7_2:44906234-44906253 | Msa1059150:intron | 40.0% | |
| ! | GCAAGAAGCTAGTCTAAACT+TGG | + | chr7_2:44906311-44906330 | Msa1059150:intron | 40.0% |
| !! | ACTTGGCCTTAGTATACGTT+TGG | + | chr7_2:44906328-44906347 | Msa1059150:intron | 40.0% |
| ! | GTTTGGAACCATGTTGATGT+TGG | + | chr7_2:44906345-44906364 | Msa1059150:intron | 40.0% |
| TGGGAAAACCAACATCAACA+TGG | - | chr7_2:44906356-44906375 | None:intergenic | 40.0% | |
| ! | CTGATTTTCGTGCATTCGAT+GGG | - | chr7_2:44906375-44906394 | None:intergenic | 40.0% |
| ! | TCTGATTTTCGTGCATTCGA+TGG | - | chr7_2:44906376-44906395 | None:intergenic | 40.0% |
| ACGCTTCAATTTGTAGCTTC+AGG | + | chr7_2:44906395-44906414 | Msa1059150:intron | 40.0% | |
| !! | ATTTTGCTGTGGAAACGCAT+CGG | + | chr7_2:44906418-44906437 | Msa1059150:intron | 40.0% |
| TAATGTTTCAGGGATAGTCG+AGG | + | chr7_2:44906650-44906669 | Msa1059150:intron | 40.0% | |
| !! | TCTGCTACTGATTCTGTTGT+CGG | + | chr7_2:44906755-44906774 | Msa1059150:CDS | 40.0% |
| AAACGGTCTAGTGAAAGTGA+AGG | + | chr7_2:44907069-44907088 | Msa1059150:intron | 40.0% | |
| CATTCACTATGGAACAGAGT+CGG | - | chr7_2:44907350-44907369 | None:intergenic | 40.0% | |
| TGTGGCAGTAACATTCACTA+TGG | - | chr7_2:44907361-44907380 | None:intergenic | 40.0% | |
| AGTGAATGTTACTGCCACAT+TGG | + | chr7_2:44907362-44907381 | Msa1059150:intron | 40.0% | |
| GAAAGAAGAATGTGCCAATG+TGG | - | chr7_2:44907379-44907398 | None:intergenic | 40.0% | |
| GGTTTGATTGTCACAGCTAT+AGG | + | chr7_2:44907551-44907570 | Msa1059150:intron | 40.0% | |
| ! | ACATGGACTGAAAAGGCTAA+AGG | + | chr7_2:44907580-44907599 | Msa1059150:intron | 40.0% |
| ATGGCAGATAATTCACTTGG+AGG | + | chr7_2:44907865-44907884 | Msa1059150:intron | 40.0% | |
| TGGCAGATAATTCACTTGGA+GGG | + | chr7_2:44907866-44907885 | Msa1059150:intron | 40.0% | |
| !! | ATGACAAAAGGTGTTCGTCA+TGG | + | chr7_2:44908009-44908028 | Msa1059150:CDS | 40.0% |
| CAAATTCTCTATCAGGGGTA+TGG | + | chr7_2:44908112-44908131 | Msa1059150:intron | 40.0% | |
| TCAGAACCGAAACACCATTA+AGG | - | chr7_2:44908232-44908251 | None:intergenic | 40.0% | |
| ! | TGAAAATTCTGGTGGTGCTT+TGG | + | chr7_2:44908259-44908278 | Msa1059150:CDS | 40.0% |
| ! | TGCCCATTCCTGTCTTTTAA+AGG | + | chr7_2:44908320-44908339 | Msa1059150:CDS | 40.0% |
| TGTCATTCCACCAATAGTTG+AGG | + | chr7_2:44908634-44908653 | Msa1059150:intron | 40.0% | |
| ! | TATCAGAGTGTCCGAATACA+AGG | - | chr7_2:44908883-44908902 | None:intergenic | 40.0% |
| CTCAAATAGTAGCACCTGAA+AGG | - | chr7_2:44908997-44909016 | None:intergenic | 40.0% | |
| ! | ATGCACGTTGAAAGTGTATC+AGG | + | chr7_2:44909029-44909048 | Msa1059150:intron | 40.0% |
| AAACTAAAAAGCAGCCACAC+CGG | - | chr7_2:44909364-44909383 | None:intergenic | 40.0% | |
| !! | AATAGTTTCTGGGACTTGGA+AGG | + | chr7_2:44909425-44909444 | Msa1059150:intron | 40.0% |
| ! | TCAAAAATTTGCTCTGTCGG+TGG | - | chr7_2:44909769-44909788 | None:intergenic | 40.0% |
| ! | GAGCAAATTTTTGACATCCC+AGG | + | chr7_2:44909775-44909794 | Msa1059150:CDS | 40.0% |
| ! | CATAAGTTGAAAGGCTACCT+GGG | - | chr7_2:44909795-44909814 | None:intergenic | 40.0% |
| ! | ACATAAGTTGAAAGGCTACC+TGG | - | chr7_2:44909796-44909815 | None:intergenic | 40.0% |
| ! | GGATGGTGACATAAGTTGAA+AGG | - | chr7_2:44909804-44909823 | None:intergenic | 40.0% |
| CAGATTTGGACACTCTATCT+TGG | - | chr7_2:44910461-44910480 | None:intergenic | 40.0% | |
| ! | CAAGATAGAGTGTCCAAATC+TGG | + | chr7_2:44910459-44910478 | Msa1059150:CDS | 40.0% |
| !! | CTTTTGGGAACTTCCAGATT+TGG | - | chr7_2:44910475-44910494 | None:intergenic | 40.0% |
| CAAATCTGGAAGTTCCCAAA+AGG | + | chr7_2:44910473-44910492 | Msa1059150:CDS | 40.0% | |
| ! | CTTTATCTTGGGTTCCCTTT+TGG | - | chr7_2:44910491-44910510 | None:intergenic | 40.0% |
| !!! | CAGTTTTGGACGCTTTATCT+TGG | - | chr7_2:44910503-44910522 | None:intergenic | 40.0% |
| AAAAGGAAGCCAAGATAGAG+TGG | + | chr7_2:44910533-44910552 | Msa1059150:CDS | 40.0% | |
| GGCATAAAATTCGGCACATA+TGG | + | chr7_2:44910554-44910573 | Msa1059150:CDS | 40.0% | |
| ATGATCTCTGTTATGGAGCT+AGG | + | chr7_2:44910608-44910627 | Msa1059150:three_prime_UTR | 40.0% | |
| CTGCAGTGTTGTCAATTCAA+TGG | - | chr7_2:44910666-44910685 | None:intergenic | 40.0% | |
| TGTACAGAACTACCAAAGCA+AGG | - | chr7_2:44910713-44910732 | None:intergenic | 40.0% | |
| ! | TGCTTTGGTAGTTCTGTACA+CGG | + | chr7_2:44910713-44910732 | Msa1059150:three_prime_UTR | 40.0% |
| !! | TGACACGCCTTTTAAAGAAC+TGG | + | chr7_2:44910838-44910857 | Msa1059150:three_prime_UTR | 40.0% |
| !! | GACACGCCTTTTAAAGAACT+GGG | + | chr7_2:44910839-44910858 | Msa1059150:three_prime_UTR | 40.0% |
| TGAGTATATGAGAGTGATGG+TGG | + | chr7_2:44910875-44910894 | Msa1059150:three_prime_UTR | 40.0% | |
| TTGGTCACCAGTACTTACTA+GGG | + | chr7_2:44910911-44910930 | Msa1059150:three_prime_UTR | 40.0% | |
| GTCAGTGTCCGTGTCATATT+CGG | - | chr7_2:44905835-44905854 | None:intergenic | 45.0% | |
| ! | ACTAGCTTCTTGCTTAAGGG+AGG | - | chr7_2:44906304-44906323 | None:intergenic | 45.0% |
| ! | GTAGCTTCAGGATTTTGCTG+TGG | + | chr7_2:44906407-44906426 | Msa1059150:intron | 45.0% |
| TGAGTCTGTGGGTAGCAATT+GGG | + | chr7_2:44906446-44906465 | Msa1059150:intron | 45.0% | |
| CTGATTCTGTTGTCGGTGAA+AGG | + | chr7_2:44906762-44906781 | Msa1059150:CDS | 45.0% | |
| CGTACCCTTACATGCTTCAT+TGG | + | chr7_2:44907398-44907417 | Msa1059150:intron | 45.0% | |
| AGTATGAGGCATGTTGTCTC+TGG | - | chr7_2:44907631-44907650 | None:intergenic | 45.0% | |
| AGAGACAACATGCCTCATAC+TGG | + | chr7_2:44907630-44907649 | Msa1059150:intron | 45.0% | |
| ACAACATGCCTCATACTGGT+TGG | + | chr7_2:44907634-44907653 | Msa1059150:intron | 45.0% | |
| CATGATACTTGTGCTCTTGC+AGG | - | chr7_2:44907730-44907749 | None:intergenic | 45.0% | |
| GATAATTCACTTGGAGGGAG+TGG | + | chr7_2:44907871-44907890 | Msa1059150:intron | 45.0% | |
| ! | AAATTCTGGTGGTGCTTTGG+AGG | + | chr7_2:44908262-44908281 | Msa1059150:CDS | 45.0% |
| ! | AGAGTGTCCGAATACAAGGT+AGG | - | chr7_2:44908879-44908898 | None:intergenic | 45.0% |
| AATGTTGGGATGGGATAGCA+GGG | + | chr7_2:44909164-44909183 | Msa1059150:intron | 45.0% | |
| AATATACACGGACACGAGCT+CGG | - | chr7_2:44909726-44909745 | None:intergenic | 45.0% | |
| AGCTCGTGTCCGTGTATATT+TGG | + | chr7_2:44909726-44909745 | Msa1059150:CDS | 45.0% | |
| GCTCGTGTCCGTGTATATTT+GGG | + | chr7_2:44909727-44909746 | Msa1059150:CDS | 45.0% | |
| CTCGTGTCCGTGTATATTTG+GGG | + | chr7_2:44909728-44909747 | Msa1059150:CDS | 45.0% | |
| TCGTGTCCGTGTATATTTGG+GGG | + | chr7_2:44909729-44909748 | Msa1059150:CDS | 45.0% | |
| ACTAGGTCATCACAGTCTGA+AGG | - | chr7_2:44909888-44909907 | None:intergenic | 45.0% | |
| CTGTTGAGCGACATAAGTGA+TGG | - | chr7_2:44910362-44910381 | None:intergenic | 45.0% | |
| ACTTCTCTACTGCAAGTGTG+CGG | - | chr7_2:44910397-44910416 | None:intergenic | 45.0% | |
| !! | ATGAGAGTGATGGTGGATTG+TGG | + | chr7_2:44910882-44910901 | Msa1059150:three_prime_UTR | 45.0% |
| !! | TGAGAGTGATGGTGGATTGT+GGG | + | chr7_2:44910883-44910902 | Msa1059150:three_prime_UTR | 45.0% |
| !! | CTAGTAAGTACTGGTGACCA+AGG | - | chr7_2:44910912-44910931 | None:intergenic | 45.0% |
| CTTGGTCACCAGTACTTACT+AGG | + | chr7_2:44910910-44910929 | Msa1059150:three_prime_UTR | 45.0% | |
| TAGTTGGCCCTAGTAAGTAC+TGG | - | chr7_2:44910921-44910940 | None:intergenic | 45.0% | |
| !! | ATAGAAAAATAAAATAAAAA+CGG | + | chr7_2:44907052-44907071 | Msa1059150:intron | 5.0% |
| TCATCATTCATCATGGGCGG+TGG | + | chr7_2:44905577-44905596 | Msa1059150:exon | 50.0% | |
| GATATATACCTGGGAGTGGG+TGG | - | chr7_2:44905732-44905751 | None:intergenic | 50.0% | |
| !! | TTCGGTGTCGGTGTCTTGAT+AGG | - | chr7_2:44905817-44905836 | None:intergenic | 50.0% |
| CACCGACACCGAATATGACA+CGG | + | chr7_2:44905824-44905843 | Msa1059150:intron | 50.0% | |
| !! | GTCCGTGTCATATTCGGTGT+CGG | - | chr7_2:44905829-44905848 | None:intergenic | 50.0% |
| ! | TCCTCAGATTAGCCGTGTCT+CGG | - | chr7_2:44905951-44905970 | None:intergenic | 50.0% |
| GTGAGTCTGTGGGTAGCAAT+TGG | + | chr7_2:44906445-44906464 | Msa1059150:intron | 50.0% | |
| GTCGGTGAAAGGAAGAGACT+TGG | + | chr7_2:44906773-44906792 | Msa1059150:CDS | 50.0% | |
| GATTGTCACAGCTATAGGCC+TGG | + | chr7_2:44907556-44907575 | Msa1059150:intron | 50.0% | |
| ACAGCTATAGGCCTGGAACA+TGG | + | chr7_2:44907563-44907582 | Msa1059150:intron | 50.0% | |
| ! | GCCTGGAACATGGACTGAAA+AGG | + | chr7_2:44907573-44907592 | Msa1059150:intron | 50.0% |
| ! | GCCTTTTCAGTCCATGTTCC+AGG | - | chr7_2:44907577-44907596 | None:intergenic | 50.0% |
| CACTTGGACCAACCAGTATG+AGG | - | chr7_2:44907645-44907664 | None:intergenic | 50.0% | |
| ! | CTCATACTGGTTGGTCCAAG+TGG | + | chr7_2:44907643-44907662 | Msa1059150:intron | 50.0% |
| ! | TGGTTGGTCCAAGTGGATCT+GGG | + | chr7_2:44907650-44907669 | Msa1059150:intron | 50.0% |
| ! | GTGCTTTTCCCAGATCCACT+TGG | - | chr7_2:44907661-44907680 | None:intergenic | 50.0% |
| GAATGTTGGGATGGGATAGC+AGG | + | chr7_2:44909163-44909182 | Msa1059150:intron | 50.0% | |
| CTACGGCAGATTCAGTCACT+AGG | - | chr7_2:44909905-44909924 | None:intergenic | 50.0% | |
| GTGACTGAATCTGCCGTAGT+TGG | + | chr7_2:44909906-44909925 | Msa1059150:CDS | 50.0% | |
| TGTCAGACACGACACCGACA+CGG | - | chr7_2:44905928-44905947 | None:intergenic | 55.0% | |
| TCGTGTCTGACACCGAGACA+CGG | + | chr7_2:44905936-44905955 | Msa1059150:intron | 55.0% | |
| ACCGAGACACGGCTAATCTG+AGG | + | chr7_2:44905947-44905966 | Msa1059150:intron | 55.0% | |
| ! | CATCGGAAGCGTGAGTCTGT+GGG | + | chr7_2:44906435-44906454 | Msa1059150:intron | 55.0% |
| CAGGGATAGTCGAGGTTTGC+AGG | + | chr7_2:44906658-44906677 | Msa1059150:intron | 55.0% | |
| ! | CTGGTTGGTCCAAGTGGATC+TGG | + | chr7_2:44907649-44907668 | Msa1059150:intron | 55.0% |
| !! | GTCATGGAGAGCTTGTTGCC+AGG | + | chr7_2:44908025-44908044 | Msa1059150:CDS | 55.0% |
| GAGCTCGGTCAGAGAGTGAT+AGG | - | chr7_2:44909711-44909730 | None:intergenic | 55.0% | |
| CTACTGCAAGTGTGCGGTTG+AGG | - | chr7_2:44910391-44910410 | None:intergenic | 55.0% | |
| TCACGACACGCGTCCAAATG+TGG | + | chr7_2:44910417-44910436 | Msa1059150:CDS | 55.0% | |
| GACACGCGTCCAAATGTGGA+AGG | + | chr7_2:44910421-44910440 | Msa1059150:CDS | 55.0% | |
| !! | TGGTGGATTGTGGGACTCCT+TGG | + | chr7_2:44910892-44910911 | Msa1059150:three_prime_UTR | 55.0% |
| CTGGGAGTGGGTGGAGAAGA+AGG | - | chr7_2:44905723-44905742 | None:intergenic | 60.0% | |
| CTTCTTCTCCACCCACTCCC+AGG | + | chr7_2:44905721-44905740 | Msa1059150:CDS | 60.0% | |
| ! | GCATCGGAAGCGTGAGTCTG+TGG | + | chr7_2:44906434-44906453 | Msa1059150:intron | 60.0% |
| !! | CTGGTGGTGCTTTGGAGGCA+CGG | + | chr7_2:44908267-44908286 | Msa1059150:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 44905387 | 44911052 | 44905387 | ID=Msa1059150;Name=Msa1059150 |
| chr7_2 | mRNA | 44905387 | 44911052 | 44905387 | ID=Msa1059150-mRNA-1;Parent=Msa1059150;Name=Msa1059150-mRNA-1;_AED=0.08;_eAED=0.09;_QI=202|0.75|0.88|1|0.62|0.77|9|473|414 |
| chr7_2 | exon | 44905387 | 44905622 | 44905387 | ID=Msa1059150-mRNA-1:exon:8114;Parent=Msa1059150-mRNA-1 |
| chr7_2 | exon | 44905694 | 44905742 | 44905694 | ID=Msa1059150-mRNA-1:exon:8115;Parent=Msa1059150-mRNA-1 |
| chr7_2 | exon | 44906661 | 44906879 | 44906661 | ID=Msa1059150-mRNA-1:exon:8116;Parent=Msa1059150-mRNA-1 |
| chr7_2 | exon | 44907632 | 44907651 | 44907632 | ID=Msa1059150-mRNA-1:exon:8117;Parent=Msa1059150-mRNA-1 |
| chr7_2 | exon | 44907872 | 44908046 | 44907872 | ID=Msa1059150-mRNA-1:exon:8118;Parent=Msa1059150-mRNA-1 |
| chr7_2 | exon | 44908127 | 44908341 | 44908127 | ID=Msa1059150-mRNA-1:exon:8119;Parent=Msa1059150-mRNA-1 |
| chr7_2 | exon | 44909671 | 44909796 | 44909671 | ID=Msa1059150-mRNA-1:exon:8120;Parent=Msa1059150-mRNA-1 |
| chr7_2 | exon | 44909892 | 44909995 | 44909892 | ID=Msa1059150-mRNA-1:exon:8121;Parent=Msa1059150-mRNA-1 |
| chr7_2 | exon | 44910277 | 44911052 | 44910277 | ID=Msa1059150-mRNA-1:exon:8122;Parent=Msa1059150-mRNA-1 |
| chr7_2 | five_prime_UTR | 44905387 | 44905588 | 44905387 | ID=Msa1059150-mRNA-1:five_prime_utr;Parent=Msa1059150-mRNA-1 |
| chr7_2 | CDS | 44905589 | 44905622 | 44905589 | ID=Msa1059150-mRNA-1:cds;Parent=Msa1059150-mRNA-1 |
| chr7_2 | CDS | 44905694 | 44905742 | 44905694 | ID=Msa1059150-mRNA-1:cds;Parent=Msa1059150-mRNA-1 |
| chr7_2 | CDS | 44906661 | 44906879 | 44906661 | ID=Msa1059150-mRNA-1:cds;Parent=Msa1059150-mRNA-1 |
| chr7_2 | CDS | 44907632 | 44907651 | 44907632 | ID=Msa1059150-mRNA-1:cds;Parent=Msa1059150-mRNA-1 |
| chr7_2 | CDS | 44907872 | 44908046 | 44907872 | ID=Msa1059150-mRNA-1:cds;Parent=Msa1059150-mRNA-1 |
| chr7_2 | CDS | 44908127 | 44908341 | 44908127 | ID=Msa1059150-mRNA-1:cds;Parent=Msa1059150-mRNA-1 |
| chr7_2 | CDS | 44909671 | 44909796 | 44909671 | ID=Msa1059150-mRNA-1:cds;Parent=Msa1059150-mRNA-1 |
| chr7_2 | CDS | 44909892 | 44909995 | 44909892 | ID=Msa1059150-mRNA-1:cds;Parent=Msa1059150-mRNA-1 |
| chr7_2 | CDS | 44910277 | 44910579 | 44910277 | ID=Msa1059150-mRNA-1:cds;Parent=Msa1059150-mRNA-1 |
| chr7_2 | three_prime_UTR | 44910580 | 44911052 | 44910580 | ID=Msa1059150-mRNA-1:three_prime_utr;Parent=Msa1059150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
