Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150090 | XP_039683735.1 | 82.073 | 463 | 33 | 1 | 1 | 413 | 1 | 463 | 0.0 | 771 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150090 | G7L060 | 80.169 | 474 | 33 | 2 | 1 | 413 | 1 | 474 | 0.0 | 763 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0604290 | Msa1150090 | 0.812610 | 3.887049e-51 | -8.615850e-47 |
| Msa0385500 | Msa1150090 | 0.810449 | 1.146246e-50 | -8.615850e-47 |
| Msa1019550 | Msa1150090 | 0.985991 | 2.550057e-165 | -8.615850e-47 |
| Msa1029050 | Msa1150090 | 0.818186 | 2.235293e-52 | -8.615850e-47 |
| Msa1059150 | Msa1150090 | 0.893985 | 3.771278e-75 | -8.615850e-47 |
| Msa0257490 | Msa1150090 | 0.812115 | 4.985600e-51 | -8.615850e-47 |
| Msa0296790 | Msa1150090 | 0.813982 | 1.942667e-51 | -8.615850e-47 |
| Msa1150090 | Msa1171210 | 0.992125 | 1.907574e-191 | -8.615850e-47 |
| Msa0542560 | Msa1150090 | 0.800102 | 1.687358e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150090 | MtrunA17_Chr7g0235041 | 80.169 | 474 | 33 | 2 | 1 | 413 | 1 | 474 | 0.0 | 763 |
| Msa1150090 | MtrunA17_Chr7g0235031 | 64.565 | 460 | 105 | 4 | 1 | 403 | 1 | 459 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150090 | AT4G13030.2 | 39.481 | 385 | 183 | 14 | 68 | 413 | 103 | 476 | 7.47e-73 | 236 |
| Msa1150090 | AT4G13030.1 | 39.481 | 385 | 183 | 14 | 68 | 413 | 105 | 478 | 8.92e-73 | 236 |
| Msa1150090 | AT4G13030.3 | 39.481 | 385 | 183 | 14 | 68 | 413 | 106 | 479 | 9.15e-73 | 236 |
Find 96 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATCTTGGGTTCATTTAT+AGG | 0.161868 | 7_4:+32973388 | None:intergenic |
| CTTTATCTTGGGTTCCCTTT+TGG | 0.172518 | 7_4:+32973345 | None:intergenic |
| AGCTCGTGTCCGTGTATATT+TGG | 0.194089 | 7_4:-32974106 | Msa1150090:CDS |
| TCTTATTAGGTAAGTTCTTT+AGG | 0.238635 | 7_4:-32973030 | Msa1150090:three_prime_UTR |
| GAAAAGCAATGTTATGAATA+AGG | 0.244087 | 7_4:-32973858 | Msa1150090:intron |
| TCTGCTACTGATTCTGTTGT+TGG | 0.274024 | 7_4:-32977080 | Msa1150090:CDS |
| CATCATTGTTATAATGTAAA+TGG | 0.280008 | 7_4:+32972823 | None:intergenic |
| ATGTAACCCAGTTCTTTAAA+AGG | 0.290049 | 7_4:+32972988 | None:intergenic |
| GAGAAGAATGAATTAGATTT+CGG | 0.306369 | 7_4:-32977134 | Msa1150090:CDS |
| GCTCGTGTCCGTGTATATTT+GGG | 0.308632 | 7_4:-32974105 | Msa1150090:CDS |
| ATTTAATATAATACACATAA+TGG | 0.316117 | 7_4:+32972786 | None:intergenic |
| CTGGTTGGTCCAAGTGGATC+TGG | 0.322073 | 7_4:-32976186 | Msa1150090:CDS |
| CTGAATGTGATTGAAAATTC+TGG | 0.329930 | 7_4:-32975587 | Msa1150090:CDS |
| AAAACTGAAAGTTCCTAAAA+AGG | 0.336316 | 7_4:-32973317 | Msa1150090:CDS |
| TATGTTATATGTGTCCTTAA+TGG | 0.342707 | 7_4:-32975620 | Msa1150090:CDS |
| TTTATAGGACCTTCCACATT+TGG | 0.344558 | 7_4:+32973403 | None:intergenic |
| CAGATTTGGACACTCTATCT+TGG | 0.345258 | 7_4:+32973375 | None:intergenic |
| AGGTGAAAAGAGTTGTAATT+AGG | 0.349852 | 7_4:-32973205 | Msa1150090:three_prime_UTR |
| ATAATAAAATGCTCAAGAAT+TGG | 0.359391 | 7_4:-32975849 | Msa1150090:CDS |
| TGAAAATTCTGGTGGTGCTT+TGG | 0.359422 | 7_4:-32975576 | Msa1150090:CDS |
| CAAGATAGAGTGTCCAAATC+TGG | 0.362124 | 7_4:-32973374 | Msa1150090:CDS |
| CAGATAGAATTTGAGTCTCT+TGG | 0.362225 | 7_4:+32975913 | None:intergenic |
| CATGATACTTGTGCTCTTGC+AGG | 0.364244 | 7_4:+32976108 | None:intergenic |
| CAGGGATAGTCGAGGTTTGC+AGG | 0.366338 | 7_4:-32977177 | Msa1150090:CDS |
| ATGTGTCCTTAATGGTGTTT+CGG | 0.368074 | 7_4:-32975612 | Msa1150090:CDS |
| TCAGAACCGAAACACCATTA+AGG | 0.375881 | 7_4:+32975606 | None:intergenic |
| AGATTTGGACACTCTATCTT+GGG | 0.383689 | 7_4:+32973376 | None:intergenic |
| CTAGTATATGATCTCTGTTA+TGG | 0.413746 | 7_4:-32973232 | Msa1150090:three_prime_UTR |
| GAGCTCGGTCAGAGAGTGAT+AGG | 0.419869 | 7_4:+32974124 | None:intergenic |
| TACCTTTAAAAGACAGGAAT+GGG | 0.433374 | 7_4:+32975513 | None:intergenic |
| CAAATTCTCTATCAGGGGTA+TGG | 0.434045 | 7_4:-32975723 | Msa1150090:intron |
| CTAGCAATAGGATTTGTCAT+TGG | 0.434697 | 7_4:-32973514 | Msa1150090:CDS |
| AGATAGAGTGGCATAAAATT+CGG | 0.438343 | 7_4:-32973288 | Msa1150090:CDS |
| GTATCAGCAAAATCATGAAT+AGG | 0.443249 | 7_4:+32973536 | None:intergenic |
| CTACTGCAAGTGTGCGGTTG+AGG | 0.446262 | 7_4:+32973445 | None:intergenic |
| GGCATAAAATTCGGCACATA+TGG | 0.446865 | 7_4:-32973279 | Msa1150090:CDS |
| TCCACTGATTCTAACCATAC+TGG | 0.457218 | 7_4:-32978251 | Msa1150090:intron |
| CTCAAGAATTGGATGACAAA+AGG | 0.457854 | 7_4:-32975838 | Msa1150090:CDS |
| CTTCTTCTCCACCCACTCCC+AGG | 0.466904 | 7_4:-32978121 | Msa1150090:intron |
| TGAGAGTGATGGTGGATTGT+AGG | 0.470316 | 7_4:-32972950 | Msa1150090:three_prime_UTR |
| ATCATCATCATCATTCATCA+TGG | 0.473117 | 7_4:-32978282 | Msa1150090:exon |
| CTGGGAGTGGGTGGAGAAGA+AGG | 0.473521 | 7_4:+32978122 | None:intergenic |
| AGAAAATACCTTTAAAAGAC+AGG | 0.478362 | 7_4:+32975507 | None:intergenic |
| GTGACTGAATCTGCCGTAGT+TGG | 0.478664 | 7_4:-32973926 | Msa1150090:CDS |
| CAAATCTGGAAGTTCCCAAA+AGG | 0.478710 | 7_4:-32973360 | Msa1150090:CDS |
| GAGTTGTAATTAGGAGTACT+TGG | 0.485433 | 7_4:-32973196 | Msa1150090:three_prime_UTR |
| AAGCTTAAAGGTGACAAGAA+AGG | 0.490372 | 7_4:-32975674 | Msa1150090:CDS |
| AAATTCTGGTGGTGCTTTGG+AGG | 0.492221 | 7_4:-32975573 | Msa1150090:CDS |
| AGAGACAACATGCCTCATAC+TGG | 0.492904 | 7_4:-32976205 | Msa1150090:CDS |
| CCATGAGTTAAAACAAGTAC+AGG | 0.493295 | 7_4:+32974153 | None:intergenic |
| GATAATTCACTTGGAGGGAG+TGG | 0.495377 | 7_4:-32975964 | Msa1150090:CDS |
| GTCATGGAGAGCTTGTTGCC+AGG | 0.504453 | 7_4:-32975810 | Msa1150090:intron |
| ATGATCTCTGTTATGGAGCT+AGG | 0.505275 | 7_4:-32973225 | Msa1150090:three_prime_UTR |
| CTGGTGGTGCTTTGGAGGCA+CGG | 0.508561 | 7_4:-32975568 | Msa1150090:CDS |
| ACCAGTATGGTTAGAATCAG+TGG | 0.509955 | 7_4:+32978250 | None:intergenic |
| GTATGATACACGTAGTTTGT+CGG | 0.510788 | 7_4:-32975887 | Msa1150090:CDS |
| TGGTGGATTGTAGGACTCCT+TGG | 0.519757 | 7_4:-32972941 | Msa1150090:three_prime_UTR |
| CTGATTCTGTTGTTGGTGAA+AGG | 0.519978 | 7_4:-32977073 | Msa1150090:CDS |
| CACTTGGACCAACCAGTATG+AGG | 0.522542 | 7_4:+32976193 | None:intergenic |
| ATGGCAGATAATTCACTTGG+AGG | 0.534040 | 7_4:-32975970 | Msa1150090:intron |
| TCACGACACGCGTCCAAATG+TGG | 0.541487 | 7_4:-32973416 | Msa1150090:CDS |
| AATATACACGGACACGAGCT+CGG | 0.542671 | 7_4:+32974109 | None:intergenic |
| ATACCTTTAAAAGACAGGAA+TGG | 0.550299 | 7_4:+32975512 | None:intergenic |
| TTGATGGCAGATAATTCACT+TGG | 0.556082 | 7_4:-32975973 | Msa1150090:intron |
| AAATCTGGAAGTTCCCAAAA+GGG | 0.558483 | 7_4:-32973359 | Msa1150090:CDS |
| TGCTTTGGTAGTTCTGTACA+CGG | 0.562614 | 7_4:-32973120 | Msa1150090:three_prime_UTR |
| TGGTTGGTCCAAGTGGATCT+GGG | 0.569380 | 7_4:-32976185 | Msa1150090:CDS |
| CTGCAGTGTTGTCAATTCAA+TGG | 0.574835 | 7_4:+32973170 | None:intergenic |
| CTACGGCAGATTCAGTCACT+AGG | 0.577978 | 7_4:+32973930 | None:intergenic |
| TGGCAGATAATTCACTTGGA+GGG | 0.579251 | 7_4:-32975969 | Msa1150090:intron |
| CTCATACTGGTTGGTCCAAG+TGG | 0.588327 | 7_4:-32976192 | Msa1150090:CDS |
| ATGACAAAAGGTGTTCGTCA+TGG | 0.590159 | 7_4:-32975826 | Msa1150090:CDS |
| TGAGTATATGAGAGTGATGG+TGG | 0.592459 | 7_4:-32972958 | Msa1150090:three_prime_UTR |
| TCATCATCATCATTCATCAT+GGG | 0.597108 | 7_4:-32978281 | Msa1150090:exon |
| AAAAGGAAGCCAAGATAGAG+TGG | 0.597198 | 7_4:-32973300 | Msa1150090:CDS |
| TGATGATATATACCTGGGAG+TGG | 0.598814 | 7_4:+32978109 | None:intergenic |
| TCATCATTCATCATGGGCGG+TGG | 0.599969 | 7_4:-32978275 | Msa1150090:exon |
| ATATCTTAACATTCCAACTA+CGG | 0.604056 | 7_4:+32973913 | None:intergenic |
| GAGGATTCTGTTTGTGATCG+TGG | 0.609511 | 7_4:+32978397 | None:intergenic |
| GATATATACCTGGGAGTGGG+TGG | 0.609726 | 7_4:+32978113 | None:intergenic |
| CTCGTGTCCGTGTATATTTG+GGG | 0.610233 | 7_4:-32974104 | Msa1150090:CDS |
| CTGTTGAGCGACATAAGTGA+TGG | 0.622726 | 7_4:+32973474 | None:intergenic |
| ACAACATGCCTCATACTGGT+TGG | 0.629494 | 7_4:-32976201 | Msa1150090:CDS |
| TAATGTTTCAGGGATAGTCG+AGG | 0.642098 | 7_4:-32977185 | Msa1150090:intron |
| AGACGTTAGTGAAGAAAGTG+TGG | 0.650856 | 7_4:-32977111 | Msa1150090:CDS |
| CTAGTAAGTACTGGTAACCA+AGG | 0.651341 | 7_4:+32972924 | None:intergenic |
| GACACGCGTCCAAATGTGGA+AGG | 0.661616 | 7_4:-32973412 | Msa1150090:CDS |
| TCATCATCATTCATCATGGG+CGG | 0.664119 | 7_4:-32978278 | Msa1150090:exon |
| TGTACAGAACTACCAAAGCA+AGG | 0.665366 | 7_4:+32973123 | None:intergenic |
| GTTGGTGAAAGGAAGAGACT+TGG | 0.667250 | 7_4:-32977062 | Msa1150090:intron |
| TCGTGTCCGTGTATATTTGG+GGG | 0.675383 | 7_4:-32974103 | Msa1150090:CDS |
| AACTGAGTATATGAGAGTGA+TGG | 0.683513 | 7_4:-32972961 | Msa1150090:three_prime_UTR |
| ACTTCTCTACTGCAAGTGTG+CGG | 0.699580 | 7_4:+32973439 | None:intergenic |
| TTGGAATCATATACTCACGA+AGG | 0.702077 | 7_4:+32975932 | None:intergenic |
| AATGTGATTGAAAATTCTGG+TGG | 0.703440 | 7_4:-32975584 | Msa1150090:CDS |
| GATGATATATACCTGGGAGT+GGG | 0.703785 | 7_4:+32978110 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAAAAGAGTTAT+CGG | - | chr7_4:32972781-32972800 | Msa1150090:three_prime_UTR | 10.0% |
| !! | ATAAGATTCAATATAATTAT+GGG | - | chr7_4:32973298-32973317 | Msa1150090:CDS | 10.0% |
| !! | TTAATTGAAAAAATGAATTT+AGG | - | chr7_4:32974519-32974538 | Msa1150090:intron | 10.0% |
| !!! | AACTTTTAAATTAAAGTTAT+AGG | - | chr7_4:32975931-32975950 | Msa1150090:CDS | 10.0% |
| !! | ATTTAATATAATACACATAA+TGG | + | chr7_4:32978446-32978465 | None:intergenic | 10.0% |
| !!! | GATAACTCTTTTTTATTTTT+TGG | + | chr7_4:32972782-32972801 | None:intergenic | 15.0% |
| !!! | AAATATTTTTGGAAAAAGAA+AGG | + | chr7_4:32973177-32973196 | None:intergenic | 15.0% |
| !!! | TGATTTTTTCAAATTATAAG+CGG | + | chr7_4:32973258-32973277 | None:intergenic | 15.0% |
| !! | CATAAGATTCAATATAATTA+TGG | - | chr7_4:32973297-32973316 | Msa1150090:CDS | 15.0% |
| !!! | TATTTTTGCACAAATTTATT+TGG | + | chr7_4:32973389-32973408 | None:intergenic | 15.0% |
| !! | ATACATTAAAAAACAGAAAT+AGG | + | chr7_4:32973433-32973452 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTTTTTATTGTCA+TGG | - | chr7_4:32974634-32974653 | Msa1150090:intron | 15.0% |
| !!! | TGATATTAACTTGAATAATT+AGG | - | chr7_4:32975167-32975186 | Msa1150090:intron | 15.0% |
| !! | ACTAGTTATCATAAAATAAA+CGG | + | chr7_4:32975850-32975869 | None:intergenic | 15.0% |
| !! | TTAAATTAAAGTTATAGGAA+TGG | - | chr7_4:32975936-32975955 | Msa1150090:CDS | 15.0% |
| !!! | TATATTAAACGTTGTATTTT+AGG | + | chr7_4:32975966-32975985 | None:intergenic | 15.0% |
| !!! | AATCTAAAATCTTATTAGTT+TGG | - | chr7_4:32976083-32976102 | Msa1150090:intron | 15.0% |
| !! | TTAATGTATATGTATGTATT+AGG | - | chr7_4:32976483-32976502 | Msa1150090:intron | 15.0% |
| !! | TATATAAATGTAAACAATTC+CGG | - | chr7_4:32976739-32976758 | Msa1150090:intron | 15.0% |
| !!! | AGTAAAATTTGCTTATATTT+TGG | - | chr7_4:32977512-32977531 | Msa1150090:intron | 15.0% |
| !! | AACAATTAAAAAAATCAATG+AGG | + | chr7_4:32977642-32977661 | None:intergenic | 15.0% |
| !!! | TCAATTAACTTTTTCTTATT+AGG | - | chr7_4:32978186-32978205 | Msa1150090:intron | 15.0% |
| !! | TTCTTTCAAAAAAAAAAAGT+TGG | + | chr7_4:32978333-32978352 | None:intergenic | 15.0% |
| !!! | TATTTTGAACTGAATTCAAT+GGG | + | chr7_4:32972912-32972931 | None:intergenic | 20.0% |
| !! | AGAGTATATGATTAATCATT+AGG | + | chr7_4:32973068-32973087 | None:intergenic | 20.0% |
| !!! | TGATAGGTTGAAAATATTTT+TGG | + | chr7_4:32973188-32973207 | None:intergenic | 20.0% |
| !! | AAAAATAGATTGTATTTGGA+GGG | - | chr7_4:32973402-32973421 | Msa1150090:CDS | 20.0% |
| !!! | TTTTTAAGATTTTTTGCTAC+TGG | - | chr7_4:32973463-32973482 | Msa1150090:CDS | 20.0% |
| !! | TTGCAATAAAAATAGGTTTA+GGG | + | chr7_4:32973683-32973702 | None:intergenic | 20.0% |
| !! | TTTGCAATAAAAATAGGTTT+AGG | + | chr7_4:32973684-32973703 | None:intergenic | 20.0% |
| !! | ATGATGATTTATAATGTTTC+AGG | - | chr7_4:32974033-32974052 | Msa1150090:intron | 20.0% |
| !! | TGATGATTTATAATGTTTCA+GGG | - | chr7_4:32974034-32974053 | Msa1150090:intron | 20.0% |
| !! | GCTTAATATTAAGACATATA+TGG | + | chr7_4:32974320-32974339 | None:intergenic | 20.0% |
| !! | AATGAACAAAGATATATAGA+TGG | + | chr7_4:32975206-32975225 | None:intergenic | 20.0% |
| !! | ATAATAAAATGCTCAAGAAT+TGG | - | chr7_4:32975380-32975399 | Msa1150090:intron | 20.0% |
| !! | AGTACTTAAATATATAAACC+TGG | + | chr7_4:32975440-32975459 | None:intergenic | 20.0% |
| !!! | ATTTTACAAATTCTCTATCA+GGG | - | chr7_4:32975500-32975519 | Msa1150090:intron | 20.0% |
| !!! | AGTAAAAATTTGAAGCTTAA+AGG | - | chr7_4:32975543-32975562 | Msa1150090:CDS | 20.0% |
| !! | TTAAAAACTTTCATGAAGAA+TGG | + | chr7_4:32976322-32976341 | None:intergenic | 20.0% |
| !! | GGAATTGTTTACATTTATAT+AGG | + | chr7_4:32976740-32976759 | None:intergenic | 20.0% |
| !! | CATTGAAATAATTGAAAGAA+GGG | + | chr7_4:32976789-32976808 | None:intergenic | 20.0% |
| !! | ACATTGAAATAATTGAAAGA+AGG | + | chr7_4:32976790-32976809 | None:intergenic | 20.0% |
| !! | TAAAAGAATGTTCAATGAAA+GGG | + | chr7_4:32977222-32977241 | None:intergenic | 20.0% |
| !! | ATAAAAGAATGTTCAATGAA+AGG | + | chr7_4:32977223-32977242 | None:intergenic | 20.0% |
| !! | AGCTTGTAACTATAAATTTA+AGG | + | chr7_4:32977409-32977428 | None:intergenic | 20.0% |
| !!! | TTTTTTTGAAAGAACTTACT+AGG | - | chr7_4:32978339-32978358 | Msa1150090:five_prime_UTR | 20.0% |
| !!! | TTTTTTGAAAGAACTTACTA+GGG | - | chr7_4:32978340-32978359 | Msa1150090:five_prime_UTR | 20.0% |
| !!! | AACAAATAACTACTTTTAGT+TGG | + | chr7_4:32978366-32978385 | None:intergenic | 20.0% |
| !! | CATCATTGTTATAATGTAAA+TGG | + | chr7_4:32978409-32978428 | None:intergenic | 20.0% |
| ! | TAAGAACGAACAAAAAAATG+AGG | + | chr7_4:32972854-32972873 | None:intergenic | 25.0% |
| !!! | CTATTTTGAACTGAATTCAA+TGG | + | chr7_4:32972913-32972932 | None:intergenic | 25.0% |
| ! | AAGAAAAACAAATACCAGTA+TGG | + | chr7_4:32972995-32973014 | None:intergenic | 25.0% |
| ! | AATTTATTTGGTTGAAAGCA+CGG | + | chr7_4:32973377-32973396 | None:intergenic | 25.0% |
| ! | GTGCAAAAATAGATTGTATT+TGG | - | chr7_4:32973398-32973417 | Msa1150090:CDS | 25.0% |
| ! | CAAAAATAGATTGTATTTGG+AGG | - | chr7_4:32973401-32973420 | Msa1150090:CDS | 25.0% |
| !! | TGGCTTTTATATTCTTAGTT+TGG | - | chr7_4:32973487-32973506 | Msa1150090:CDS | 25.0% |
| ! | TCTAAACTTTAGTATACGTT+TGG | - | chr7_4:32973726-32973745 | Msa1150090:intron | 25.0% |
| !! | TTATGTGAAACATGTTTTGT+AGG | - | chr7_4:32973924-32973943 | Msa1150090:CDS | 25.0% |
| ! | ACTATAGGATCAAGAAATAA+AGG | + | chr7_4:32973986-32974005 | None:intergenic | 25.0% |
| ! | GAGAAGAATGAATTAGATTT+CGG | - | chr7_4:32974095-32974114 | Msa1150090:CDS | 25.0% |
| ! | AAACCAAAGAAAAAATCTTG+AGG | - | chr7_4:32974252-32974271 | Msa1150090:intron | 25.0% |
| !! | AAAGGGTATATTATTATCTG+AGG | - | chr7_4:32974391-32974410 | Msa1150090:intron | 25.0% |
| !! | AAAAAATGAATTTAGGACTC+AGG | - | chr7_4:32974526-32974545 | Msa1150090:intron | 25.0% |
| !!! | GCTTTTTCTTACATAAATCA+AGG | + | chr7_4:32974583-32974602 | None:intergenic | 25.0% |
| ! | AAGTCATCAAAACTAATCTA+GGG | + | chr7_4:32974709-32974728 | None:intergenic | 25.0% |
| ! | TAAGTCATCAAAACTAATCT+AGG | + | chr7_4:32974710-32974729 | None:intergenic | 25.0% |
| ! | TCAGTGTGTAATTGAAATTA+TGG | - | chr7_4:32974833-32974852 | Msa1150090:intron | 25.0% |
| ! | AACAAAGATATATAGATGGA+AGG | + | chr7_4:32975202-32975221 | None:intergenic | 25.0% |
| ! | CCATCAAAAGATAAATGTAA+TGG | + | chr7_4:32975243-32975262 | None:intergenic | 25.0% |
| !! | CCATTACATTTATCTTTTGA+TGG | - | chr7_4:32975240-32975259 | Msa1150090:intron | 25.0% |
| !! | CATTTTACAAATTCTCTATC+AGG | - | chr7_4:32975499-32975518 | Msa1150090:intron | 25.0% |
| !! | TTTTACAAATTCTCTATCAG+GGG | - | chr7_4:32975501-32975520 | Msa1150090:intron | 25.0% |
| !! | ATTAACTTTTCTTCGTTTAC+TGG | + | chr7_4:32975589-32975608 | None:intergenic | 25.0% |
| ! | TATGTTATATGTGTCCTTAA+TGG | - | chr7_4:32975609-32975628 | Msa1150090:CDS | 25.0% |
| !! | AGAAAATACCTTTAAAAGAC+AGG | + | chr7_4:32975725-32975744 | None:intergenic | 25.0% |
| !!! | TGTCTTTTAAAGGTATTTTC+TGG | - | chr7_4:32975724-32975743 | Msa1150090:intron | 25.0% |
| ! | GCAAATGAAAAAGAAAAAAG+TGG | + | chr7_4:32975802-32975821 | None:intergenic | 25.0% |
| !! | TTTTCTCTTTCACATTTTTC+AGG | + | chr7_4:32976516-32976535 | None:intergenic | 25.0% |
| ! | ACGTTTAATTAACAGAATGT+TGG | - | chr7_4:32976546-32976565 | Msa1150090:intron | 25.0% |
| ! | CGTTTAATTAACAGAATGTT+GGG | - | chr7_4:32976547-32976566 | Msa1150090:intron | 25.0% |
| ! | ATGAGAAAGATAGAAATACA+GGG | + | chr7_4:32976597-32976616 | None:intergenic | 25.0% |
| ! | AATGAGAAAGATAGAAATAC+AGG | + | chr7_4:32976598-32976617 | None:intergenic | 25.0% |
| ! | TTTACAGTATAACTATCGAA+AGG | + | chr7_4:32976627-32976646 | None:intergenic | 25.0% |
| ! | ACCAAAATTCACTCTATTAT+CGG | + | chr7_4:32976682-32976701 | None:intergenic | 25.0% |
| ! | AATATTCATGTCAAAGAAAC+TGG | + | chr7_4:32976711-32976730 | None:intergenic | 25.0% |
| ! | AGAGACTCAATTAGATAAAT+TGG | - | chr7_4:32976887-32976906 | Msa1150090:intron | 25.0% |
| ! | GAGACTCAATTAGATAAATT+GGG | - | chr7_4:32976888-32976907 | Msa1150090:intron | 25.0% |
| ! | AATTGGGAGAAATAGTAAAA+AGG | - | chr7_4:32976904-32976923 | Msa1150090:intron | 25.0% |
| ! | AAATTCAGAAGTTTGTATGA+AGG | - | chr7_4:32976938-32976957 | Msa1150090:intron | 25.0% |
| ! | AATTCAGAAGTTTGTATGAA+GGG | - | chr7_4:32976939-32976958 | Msa1150090:intron | 25.0% |
| ! | ATATCTTAACATTCCAACTA+CGG | + | chr7_4:32977319-32977338 | None:intergenic | 25.0% |
| ! | GAAAAGCAATGTTATGAATA+AGG | - | chr7_4:32977371-32977390 | Msa1150090:intron | 25.0% |
| ! | AAGCAAAAAATGTAGTTTGA+TGG | + | chr7_4:32977539-32977558 | None:intergenic | 25.0% |
| !!! | TTTTTAGGAACTTTCAGTTT+TGG | + | chr7_4:32977913-32977932 | None:intergenic | 25.0% |
| ! | AAAACTGAAAGTTCCTAAAA+AGG | - | chr7_4:32977912-32977931 | Msa1150090:intron | 25.0% |
| ! | TCTAAAAAGACTTTCTACTT+TGG | + | chr7_4:32978142-32978161 | None:intergenic | 25.0% |
| ! | TCTTATTAGGTAAGTTCTTT+AGG | - | chr7_4:32978199-32978218 | Msa1150090:intron | 25.0% |
| ATCATCATCATCATTCATCA+TGG | - | chr7_4:32972947-32972966 | Msa1150090:three_prime_UTR | 30.0% | |
| TCATCATCATCATTCATCAT+GGG | - | chr7_4:32972948-32972967 | Msa1150090:three_prime_UTR | 30.0% | |
| AACACAAGAATTCATCAAAG+AGG | + | chr7_4:32973042-32973061 | None:intergenic | 30.0% | |
| AAGGAAAGTGAAAATCTTCA+TGG | + | chr7_4:32973091-32973110 | None:intergenic | 30.0% | |
| ATCAACACTAAGTTTCTGTT+AGG | + | chr7_4:32973872-32973891 | None:intergenic | 30.0% | |
| !! | CTTAGTGTTGATATAATGCA+TGG | - | chr7_4:32973880-32973899 | Msa1150090:CDS | 30.0% |
| ! | TGATATAATGCATGGCATTT+TGG | - | chr7_4:32973888-32973907 | Msa1150090:CDS | 30.0% |
| TCAATTCATCATAACTTTGC+AGG | + | chr7_4:32974208-32974227 | None:intergenic | 30.0% | |
| ! | TGAATTGAAGATTGATAGCA+AGG | - | chr7_4:32974220-32974239 | Msa1150090:intron | 30.0% |
| !!! | ACACCTCAAGATTTTTTCTT+TGG | + | chr7_4:32974258-32974277 | None:intergenic | 30.0% |
| ATATTAAGCGAAAGCTTCAA+AGG | - | chr7_4:32974331-32974350 | Msa1150090:intron | 30.0% | |
| TTCAGCTTTCAAACATTGAA+AGG | - | chr7_4:32974373-32974392 | Msa1150090:intron | 30.0% | |
| TCAGCTTTCAAACATTGAAA+GGG | - | chr7_4:32974374-32974393 | Msa1150090:intron | 30.0% | |
| AGGTCAAAAACATGAATTTC+AGG | - | chr7_4:32974546-32974565 | Msa1150090:intron | 30.0% | |
| TGTCATGGAAATAGTATTAC+AGG | - | chr7_4:32974649-32974668 | Msa1150090:intron | 30.0% | |
| GTCATGGAAATAGTATTACA+GGG | - | chr7_4:32974650-32974669 | Msa1150090:intron | 30.0% | |
| TCATGGAAATAGTATTACAG+GGG | - | chr7_4:32974651-32974670 | Msa1150090:intron | 30.0% | |
| ! | AAATTTTGTATGTGAGCATG+TGG | - | chr7_4:32974890-32974909 | Msa1150090:intron | 30.0% |
| AGAATATGAAGTTTATCGTG+TGG | - | chr7_4:32974924-32974943 | Msa1150090:intron | 30.0% | |
| TATCTTTGTTCATTGACCTA+AGG | - | chr7_4:32975212-32975231 | Msa1150090:intron | 30.0% | |
| !! | AAATGTAATGGATACTCCTT+AGG | + | chr7_4:32975231-32975250 | None:intergenic | 30.0% |
| CTGAATGTGATTGAAAATTC+TGG | - | chr7_4:32975642-32975661 | Msa1150090:CDS | 30.0% | |
| AATGTGATTGAAAATTCTGG+TGG | - | chr7_4:32975645-32975664 | Msa1150090:CDS | 30.0% | |
| ! | TACCTTTAAAAGACAGGAAT+GGG | + | chr7_4:32975719-32975738 | None:intergenic | 30.0% |
| ! | ATACCTTTAAAAGACAGGAA+TGG | + | chr7_4:32975720-32975739 | None:intergenic | 30.0% |
| CAGATATAATGTGACACATA+TGG | - | chr7_4:32975897-32975916 | Msa1150090:CDS | 30.0% | |
| ATATAATGTGACACATATGG+AGG | - | chr7_4:32975900-32975919 | Msa1150090:CDS | 30.0% | |
| TATAATGTGACACATATGGA+GGG | - | chr7_4:32975901-32975920 | Msa1150090:CDS | 30.0% | |
| TTGTATAATTGACCTATGCT+TGG | - | chr7_4:32976149-32976168 | Msa1150090:CDS | 30.0% | |
| ATCTTAGTGTTAACGTTGAA+CGG | - | chr7_4:32976172-32976191 | Msa1150090:CDS | 30.0% | |
| AAACTATCCTACCTTGTATT+CGG | - | chr7_4:32976266-32976285 | Msa1150090:intron | 30.0% | |
| AAGGAAATAACACAAGTGTA+TGG | + | chr7_4:32976375-32976394 | None:intergenic | 30.0% | |
| !!! | CACTTGTGTTATTTCCTTTT+AGG | - | chr7_4:32976377-32976396 | Msa1150090:intron | 30.0% |
| TAATTAACAGAATGTTGGGA+TGG | - | chr7_4:32976551-32976570 | Msa1150090:intron | 30.0% | |
| AATTAACAGAATGTTGGGAT+GGG | - | chr7_4:32976552-32976571 | Msa1150090:intron | 30.0% | |
| ! | TAGAAATACAGGGTTTTCAA+GGG | + | chr7_4:32976587-32976606 | None:intergenic | 30.0% |
| ! | ATAGAAATACAGGGTTTTCA+AGG | + | chr7_4:32976588-32976607 | None:intergenic | 30.0% |
| ! | ACCGATAATAGAGTGAATTT+TGG | - | chr7_4:32976678-32976697 | Msa1150090:intron | 30.0% |
| ! | ATGTCAAAAATTTGCTCTGT+CGG | + | chr7_4:32977169-32977188 | None:intergenic | 30.0% |
| !! | TTCATAACATTGCTTTTCTG+AGG | + | chr7_4:32977369-32977388 | None:intergenic | 30.0% |
| TTGATATAACTGAGTGCAAT+GGG | - | chr7_4:32977450-32977469 | Msa1150090:intron | 30.0% | |
| ATTTCTCAAACAGTGACTAA+AGG | - | chr7_4:32977601-32977620 | Msa1150090:intron | 30.0% | |
| !! | TTTTAATTGTTCATGCTTGC+AGG | - | chr7_4:32977651-32977670 | Msa1150090:intron | 30.0% |
| GTATCAGCAAAATCATGAAT+AGG | + | chr7_4:32977696-32977715 | None:intergenic | 30.0% | |
| ! | ATTTTGCTGATACTAGCAAT+AGG | - | chr7_4:32977703-32977722 | Msa1150090:intron | 30.0% |
| TCTATCTTGGGTTCATTTAT+AGG | + | chr7_4:32977844-32977863 | None:intergenic | 30.0% | |
| ! | AATTTTATGCCACTCTATCT+TGG | + | chr7_4:32977941-32977960 | None:intergenic | 30.0% |
| AGATAGAGTGGCATAAAATT+CGG | - | chr7_4:32977941-32977960 | Msa1150090:intron | 30.0% | |
| CTAGTATATGATCTCTGTTA+TGG | - | chr7_4:32977997-32978016 | Msa1150090:intron | 30.0% | |
| AGGTGAAAAGAGTTGTAATT+AGG | - | chr7_4:32978024-32978043 | Msa1150090:intron | 30.0% | |
| ATGTAACCCAGTTCTTTAAA+AGG | + | chr7_4:32978244-32978263 | None:intergenic | 30.0% | |
| AGCAGTGATGATATATACCT+GGG | + | chr7_4:32973128-32973147 | None:intergenic | 35.0% | |
| AAGCAGTGATGATATATACC+TGG | + | chr7_4:32973129-32973148 | None:intergenic | 35.0% | |
| ! | GTCTAGTTTCTGTACTTGAT+AGG | + | chr7_4:32973204-32973223 | None:intergenic | 35.0% |
| !!! | TAAGATTTTTTGCTACTGGC+TGG | - | chr7_4:32973467-32973486 | Msa1150090:CDS | 35.0% |
| ! | GGTTTAGGGTTATTAAGTTG+AGG | + | chr7_4:32973669-32973688 | None:intergenic | 35.0% |
| GGGAGGTTTGCAATAAAAAT+AGG | + | chr7_4:32973690-32973709 | None:intergenic | 35.0% | |
| !! | TAGACTAGCTTCTTGCTTAA+GGG | + | chr7_4:32973710-32973729 | None:intergenic | 35.0% |
| !! | TTAGACTAGCTTCTTGCTTA+AGG | + | chr7_4:32973711-32973730 | None:intergenic | 35.0% |
| ! | TTGTAGGATCAGTGCTTTTA+AGG | - | chr7_4:32973940-32973959 | Msa1150090:CDS | 35.0% |
| CGAATGCTAATGTCAACTAT+AGG | + | chr7_4:32974001-32974020 | None:intergenic | 35.0% | |
| CATAACTTTGCAGGATTTCT+TGG | + | chr7_4:32974199-32974218 | None:intergenic | 35.0% | |
| TCATCCAATGAAGCATGTAA+GGG | + | chr7_4:32974799-32974818 | None:intergenic | 35.0% | |
| TTCATCCAATGAAGCATGTA+AGG | + | chr7_4:32974800-32974819 | None:intergenic | 35.0% | |
| ! | AAGAGCACAAGTATCATGTA+CGG | - | chr7_4:32975126-32975145 | Msa1150090:intron | 35.0% |
| ! | TTGATGGCAGATAATTCACT+TGG | - | chr7_4:32975256-32975275 | Msa1150090:intron | 35.0% |
| TTGGAATCATATACTCACGA+AGG | + | chr7_4:32975300-32975319 | None:intergenic | 35.0% | |
| CAGATAGAATTTGAGTCTCT+TGG | + | chr7_4:32975319-32975338 | None:intergenic | 35.0% | |
| ! | GTATGATACACGTAGTTTGT+CGG | - | chr7_4:32975342-32975361 | Msa1150090:intron | 35.0% |
| CTCAAGAATTGGATGACAAA+AGG | - | chr7_4:32975391-32975410 | Msa1150090:intron | 35.0% | |
| AAGCTTAAAGGTGACAAGAA+AGG | - | chr7_4:32975555-32975574 | Msa1150090:CDS | 35.0% | |
| ATGTGTCCTTAATGGTGTTT+CGG | - | chr7_4:32975617-32975636 | Msa1150090:CDS | 35.0% | |
| TATTTAGCCTCAACTATTGG+TGG | + | chr7_4:32976041-32976060 | None:intergenic | 35.0% | |
| CAGTATTTAGCCTCAACTAT+TGG | + | chr7_4:32976044-32976063 | None:intergenic | 35.0% | |
| GGCTAAATACTGTGATGATA+CGG | - | chr7_4:32976052-32976071 | Msa1150090:intron | 35.0% | |
| TAGTTTGGATGCTACGTAAT+TGG | - | chr7_4:32976098-32976117 | Msa1150090:intron | 35.0% | |
| TAACACTAAGATCCAAGCAT+AGG | + | chr7_4:32976164-32976183 | None:intergenic | 35.0% | |
| ACGTTGAACGGTGATTTATA+AGG | - | chr7_4:32976184-32976203 | Msa1150090:CDS | 35.0% | |
| ! | TATAAGGCCTTTTGATATGC+TGG | - | chr7_4:32976200-32976219 | Msa1150090:CDS | 35.0% |
| GTAATCACCAGCATATCAAA+AGG | + | chr7_4:32976210-32976229 | None:intergenic | 35.0% | |
| TTCCAATCATTAAATGCTGC+AGG | - | chr7_4:32976231-32976250 | Msa1150090:intron | 35.0% | |
| AACCTGCAGCATTTAATGAT+TGG | + | chr7_4:32976236-32976255 | None:intergenic | 35.0% | |
| TCATTAAATGCTGCAGGTTT+AGG | - | chr7_4:32976237-32976256 | Msa1150090:intron | 35.0% | |
| TAACAGTCATTGTGACAATG+TGG | - | chr7_4:32976339-32976358 | Msa1150090:intron | 35.0% | |
| AACAGTCATTGTGACAATGT+GGG | - | chr7_4:32976340-32976359 | Msa1150090:intron | 35.0% | |
| CTCAAATAGTAGCACCTAAA+AGG | + | chr7_4:32976394-32976413 | None:intergenic | 35.0% | |
| ! | ATGCATGTTGAAAGTGTATC+AGG | - | chr7_4:32976426-32976445 | Msa1150090:intron | 35.0% |
| !!! | TCTTTCACATTTTTCAGGCA+TGG | + | chr7_4:32976511-32976530 | None:intergenic | 35.0% |
| AAATGTAAACAATTCCGGTG+TGG | - | chr7_4:32976744-32976763 | Msa1150090:intron | 35.0% | |
| TATGCCGCAAAAATAGTTTC+TGG | - | chr7_4:32976811-32976830 | Msa1150090:intron | 35.0% | |
| ATGCCGCAAAAATAGTTTCT+GGG | - | chr7_4:32976812-32976831 | Msa1150090:intron | 35.0% | |
| !!! | AGTCCCAGAAACTATTTTTG+CGG | + | chr7_4:32976818-32976837 | None:intergenic | 35.0% |
| !! | CAAAAATAGTTTCTGGGACT+TGG | - | chr7_4:32976818-32976837 | Msa1150090:intron | 35.0% |
| GTTTCTGTTCCTTTCATCAA+CGG | - | chr7_4:32976852-32976871 | Msa1150090:intron | 35.0% | |
| ! | AACTAAACACCGTTGATGAA+AGG | + | chr7_4:32976864-32976883 | None:intergenic | 35.0% |
| CTATTATGAACACATGCAAG+AGG | + | chr7_4:32977013-32977032 | None:intergenic | 35.0% | |
| CCATGAGTTAAAACAAGTAC+AGG | + | chr7_4:32977079-32977098 | None:intergenic | 35.0% | |
| !!! | CCTGTACTTGTTTTAACTCA+TGG | - | chr7_4:32977076-32977095 | Msa1150090:CDS | 35.0% |
| ATAACTCCCCCAAATATACA+CGG | + | chr7_4:32977135-32977154 | None:intergenic | 35.0% | |
| TGTATATTTGGGGGAGTTAT+TGG | - | chr7_4:32977135-32977154 | Msa1150090:CDS | 35.0% | |
| GTATATTTGGGGGAGTTATT+GGG | - | chr7_4:32977136-32977155 | Msa1150090:CDS | 35.0% | |
| AGAATGTTCAATGAAAGGGA+TGG | + | chr7_4:32977218-32977237 | None:intergenic | 35.0% | |
| GTTGATATAACTGAGTGCAA+TGG | - | chr7_4:32977449-32977468 | Msa1150090:intron | 35.0% | |
| ! | TCGAGATAGAGTGTTTGATT+TGG | + | chr7_4:32977575-32977594 | None:intergenic | 35.0% |
| CTAGCAATAGGATTTGTCAT+TGG | - | chr7_4:32977715-32977734 | Msa1150090:intron | 35.0% | |
| TTTATAGGACCTTCCACATT+TGG | + | chr7_4:32977829-32977848 | None:intergenic | 35.0% | |
| AGATTTGGACACTCTATCTT+GGG | + | chr7_4:32977856-32977875 | None:intergenic | 35.0% | |
| AAATCTGGAAGTTCCCAAAA+GGG | - | chr7_4:32977870-32977889 | Msa1150090:intron | 35.0% | |
| ! | TTTATCTTGGGTTCCCTTTT+GGG | + | chr7_4:32977886-32977905 | None:intergenic | 35.0% |
| !!! | AGTTTTGGACGCTTTATCTT+GGG | + | chr7_4:32977898-32977917 | None:intergenic | 35.0% |
| ! | TCTATCTTGGCTTCCTTTTT+AGG | + | chr7_4:32977928-32977947 | None:intergenic | 35.0% |
| !! | GAGTTGTAATTAGGAGTACT+TGG | - | chr7_4:32978033-32978052 | Msa1150090:intron | 35.0% |
| !! | ATCACTTTTGTTCCTTGCTT+TGG | - | chr7_4:32978094-32978113 | Msa1150090:intron | 35.0% |
| AACTGAGTATATGAGAGTGA+TGG | - | chr7_4:32978268-32978287 | Msa1150090:exon | 35.0% | |
| TTGGTTACCAGTACTTACTA+GGG | - | chr7_4:32978307-32978326 | Msa1150090:five_prime_UTR | 35.0% | |
| TCATCATCATTCATCATGGG+CGG | - | chr7_4:32972951-32972970 | Msa1150090:three_prime_UTR | 40.0% | |
| !! | TCCACTGATTCTAACCATAC+TGG | - | chr7_4:32972978-32972997 | Msa1150090:three_prime_UTR | 40.0% |
| ACCAGTATGGTTAGAATCAG+TGG | + | chr7_4:32972982-32973001 | None:intergenic | 40.0% | |
| GATGATATATACCTGGGAGT+GGG | + | chr7_4:32973122-32973141 | None:intergenic | 40.0% | |
| TGATGATATATACCTGGGAG+TGG | + | chr7_4:32973123-32973142 | None:intergenic | 40.0% | |
| ATAATTATGGGTGTCCGTGT+CGG | - | chr7_4:32973310-32973329 | Msa1150090:CDS | 40.0% | |
| TGCTTCTGAACAAGCACTTA+TGG | - | chr7_4:32973637-32973656 | Msa1150090:intron | 40.0% | |
| ! | GTTTGGAACCATGTTGATGT+TGG | - | chr7_4:32973743-32973762 | Msa1150090:intron | 40.0% |
| TGGGAAAACCAACATCAACA+TGG | + | chr7_4:32973754-32973773 | None:intergenic | 40.0% | |
| ! | CTGATTTTCGTGCATTCGAT+GGG | + | chr7_4:32973773-32973792 | None:intergenic | 40.0% |
| ! | TCTGATTTTCGTGCATTCGA+TGG | + | chr7_4:32973774-32973793 | None:intergenic | 40.0% |
| ACGCTTCAATTTGTAGCTTC+AGG | - | chr7_4:32973793-32973812 | Msa1150090:intron | 40.0% | |
| !! | ATTTTGCTGTGGAAACGCAT+CGG | - | chr7_4:32973816-32973835 | Msa1150090:intron | 40.0% |
| TAATGTTTCAGGGATAGTCG+AGG | - | chr7_4:32974044-32974063 | Msa1150090:intron | 40.0% | |
| AGACGTTAGTGAAGAAAGTG+TGG | - | chr7_4:32974118-32974137 | Msa1150090:CDS | 40.0% | |
| !! | TCTGCTACTGATTCTGTTGT+TGG | - | chr7_4:32974149-32974168 | Msa1150090:CDS | 40.0% |
| ! | CTGATTCTGTTGTTGGTGAA+AGG | - | chr7_4:32974156-32974175 | Msa1150090:CDS | 40.0% |
| AAACGGTCTAGTCAAAGTGA+AGG | - | chr7_4:32974463-32974482 | Msa1150090:intron | 40.0% | |
| CATTCACTATGGAACAGAGT+CGG | + | chr7_4:32974744-32974763 | None:intergenic | 40.0% | |
| TGTGGCAGTAACATTCACTA+TGG | + | chr7_4:32974755-32974774 | None:intergenic | 40.0% | |
| AGTGAATGTTACTGCCACAT+TGG | - | chr7_4:32974756-32974775 | Msa1150090:intron | 40.0% | |
| GAAAGAAGAATGTGCCAATG+TGG | + | chr7_4:32974773-32974792 | None:intergenic | 40.0% | |
| GGTTTGATTGTCACAGCTAT+AGG | - | chr7_4:32974945-32974964 | Msa1150090:intron | 40.0% | |
| ! | ACATGGACTGAAAAGGCTAA+AGG | - | chr7_4:32974974-32974993 | Msa1150090:intron | 40.0% |
| ATGGCAGATAATTCACTTGG+AGG | - | chr7_4:32975259-32975278 | Msa1150090:intron | 40.0% | |
| TGGCAGATAATTCACTTGGA+GGG | - | chr7_4:32975260-32975279 | Msa1150090:intron | 40.0% | |
| !! | ATGACAAAAGGTGTTCGTCA+TGG | - | chr7_4:32975403-32975422 | Msa1150090:intron | 40.0% |
| CAAATTCTCTATCAGGGGTA+TGG | - | chr7_4:32975506-32975525 | Msa1150090:intron | 40.0% | |
| TCAGAACCGAAACACCATTA+AGG | + | chr7_4:32975626-32975645 | None:intergenic | 40.0% | |
| ! | TGAAAATTCTGGTGGTGCTT+TGG | - | chr7_4:32975653-32975672 | Msa1150090:CDS | 40.0% |
| ! | TGCCCATTCCTGTCTTTTAA+AGG | - | chr7_4:32975714-32975733 | Msa1150090:intron | 40.0% |
| TGTCATTCCACCAATAGTTG+AGG | - | chr7_4:32976031-32976050 | Msa1150090:intron | 40.0% | |
| ! | TATCAGAGTGTCCGAATACA+AGG | + | chr7_4:32976280-32976299 | None:intergenic | 40.0% |
| AAACTAAAAAGCAGCCACAC+CGG | + | chr7_4:32976761-32976780 | None:intergenic | 40.0% | |
| !! | AATAGTTTCTGGGACTTGGA+AGG | - | chr7_4:32976822-32976841 | Msa1150090:intron | 40.0% |
| ! | TCAAAAATTTGCTCTGTCGG+TGG | + | chr7_4:32977166-32977185 | None:intergenic | 40.0% |
| ! | GAGCAAATTTTTGACATCCC+AGG | - | chr7_4:32977172-32977191 | Msa1150090:CDS | 40.0% |
| ! | CATAAGTTGAAAGGCTACCT+GGG | + | chr7_4:32977192-32977211 | None:intergenic | 40.0% |
| ! | ACATAAGTTGAAAGGCTACC+TGG | + | chr7_4:32977193-32977212 | None:intergenic | 40.0% |
| ! | GGATGGTGACATAAGTTGAA+AGG | + | chr7_4:32977201-32977220 | None:intergenic | 40.0% |
| CAGATTTGGACACTCTATCT+TGG | + | chr7_4:32977857-32977876 | None:intergenic | 40.0% | |
| ! | CAAGATAGAGTGTCCAAATC+TGG | - | chr7_4:32977855-32977874 | Msa1150090:intron | 40.0% |
| !! | CTTTTGGGAACTTCCAGATT+TGG | + | chr7_4:32977871-32977890 | None:intergenic | 40.0% |
| CAAATCTGGAAGTTCCCAAA+AGG | - | chr7_4:32977869-32977888 | Msa1150090:intron | 40.0% | |
| ! | CTTTATCTTGGGTTCCCTTT+TGG | + | chr7_4:32977887-32977906 | None:intergenic | 40.0% |
| !!! | CAGTTTTGGACGCTTTATCT+TGG | + | chr7_4:32977899-32977918 | None:intergenic | 40.0% |
| AAAAGGAAGCCAAGATAGAG+TGG | - | chr7_4:32977929-32977948 | Msa1150090:intron | 40.0% | |
| GGCATAAAATTCGGCACATA+TGG | - | chr7_4:32977950-32977969 | Msa1150090:intron | 40.0% | |
| ATGATCTCTGTTATGGAGCT+AGG | - | chr7_4:32978004-32978023 | Msa1150090:intron | 40.0% | |
| CTGCAGTGTTGTCAATTCAA+TGG | + | chr7_4:32978062-32978081 | None:intergenic | 40.0% | |
| TGTACAGAACTACCAAAGCA+AGG | + | chr7_4:32978109-32978128 | None:intergenic | 40.0% | |
| ! | TGCTTTGGTAGTTCTGTACA+CGG | - | chr7_4:32978109-32978128 | Msa1150090:intron | 40.0% |
| !! | TGACACGCCTTTTAAAGAAC+TGG | - | chr7_4:32978234-32978253 | Msa1150090:intron | 40.0% |
| !! | GACACGCCTTTTAAAGAACT+GGG | - | chr7_4:32978235-32978254 | Msa1150090:intron | 40.0% |
| TGAGTATATGAGAGTGATGG+TGG | - | chr7_4:32978271-32978290 | Msa1150090:exon | 40.0% | |
| !! | CTAGTAAGTACTGGTAACCA+AGG | + | chr7_4:32978308-32978327 | None:intergenic | 40.0% |
| CTTGGTTACCAGTACTTACT+AGG | - | chr7_4:32978306-32978325 | Msa1150090:five_prime_UTR | 40.0% | |
| GAGGATTCTGTTTGTGATCG+TGG | + | chr7_4:32972835-32972854 | None:intergenic | 45.0% | |
| GTCAGTGTCCGTGTCATATT+CGG | + | chr7_4:32973234-32973253 | None:intergenic | 45.0% | |
| ! | ACTAGCTTCTTGCTTAAGGG+AGG | + | chr7_4:32973707-32973726 | None:intergenic | 45.0% |
| ! | GTAGCTTCAGGATTTTGCTG+TGG | - | chr7_4:32973805-32973824 | Msa1150090:intron | 45.0% |
| TGAGTCTGTGGGTAGCAATT+GGG | - | chr7_4:32973844-32973863 | Msa1150090:intron | 45.0% | |
| ! | GTTGGTGAAAGGAAGAGACT+TGG | - | chr7_4:32974167-32974186 | Msa1150090:intron | 45.0% |
| CGTACCCTTACATGCTTCAT+TGG | - | chr7_4:32974792-32974811 | Msa1150090:intron | 45.0% | |
| AGTATGAGGCATGTTGTCTC+TGG | + | chr7_4:32975025-32975044 | None:intergenic | 45.0% | |
| AGAGACAACATGCCTCATAC+TGG | - | chr7_4:32975024-32975043 | Msa1150090:intron | 45.0% | |
| ACAACATGCCTCATACTGGT+TGG | - | chr7_4:32975028-32975047 | Msa1150090:intron | 45.0% | |
| CATGATACTTGTGCTCTTGC+AGG | + | chr7_4:32975124-32975143 | None:intergenic | 45.0% | |
| GATAATTCACTTGGAGGGAG+TGG | - | chr7_4:32975265-32975284 | Msa1150090:intron | 45.0% | |
| ! | AAATTCTGGTGGTGCTTTGG+AGG | - | chr7_4:32975656-32975675 | Msa1150090:CDS | 45.0% |
| ! | AGAGTGTCCGAATACAAGGT+AGG | + | chr7_4:32976276-32976295 | None:intergenic | 45.0% |
| AATGTTGGGATGGGATAGCA+GGG | - | chr7_4:32976561-32976580 | Msa1150090:intron | 45.0% | |
| AATATACACGGACACGAGCT+CGG | + | chr7_4:32977123-32977142 | None:intergenic | 45.0% | |
| AGCTCGTGTCCGTGTATATT+TGG | - | chr7_4:32977123-32977142 | Msa1150090:CDS | 45.0% | |
| GCTCGTGTCCGTGTATATTT+GGG | - | chr7_4:32977124-32977143 | Msa1150090:CDS | 45.0% | |
| CTCGTGTCCGTGTATATTTG+GGG | - | chr7_4:32977125-32977144 | Msa1150090:CDS | 45.0% | |
| TCGTGTCCGTGTATATTTGG+GGG | - | chr7_4:32977126-32977145 | Msa1150090:CDS | 45.0% | |
| ACTAGGTCATCACAGTCTGA+AGG | + | chr7_4:32977285-32977304 | None:intergenic | 45.0% | |
| ACTTCTCTACTGCAAGTGTG+CGG | + | chr7_4:32977793-32977812 | None:intergenic | 45.0% | |
| !! | TGAGAGTGATGGTGGATTGT+AGG | - | chr7_4:32978279-32978298 | Msa1150090:exon | 45.0% |
| AAGTTGGCCCTAGTAAGTAC+TGG | + | chr7_4:32978317-32978336 | None:intergenic | 45.0% | |
| !! | ATAGAAAAATAAAATAAAAA+CGG | - | chr7_4:32974446-32974465 | Msa1150090:intron | 5.0% |
| TCATCATTCATCATGGGCGG+TGG | - | chr7_4:32972954-32972973 | Msa1150090:three_prime_UTR | 50.0% | |
| GATATATACCTGGGAGTGGG+TGG | + | chr7_4:32973119-32973138 | None:intergenic | 50.0% | |
| CACCGACACCGAATATGACA+CGG | - | chr7_4:32973223-32973242 | Msa1150090:three_prime_UTR | 50.0% | |
| !! | GTCCGTGTCATATTCGGTGT+CGG | + | chr7_4:32973228-32973247 | None:intergenic | 50.0% |
| ! | TCCTCAGATTAGCCGTGTCT+CGG | + | chr7_4:32973350-32973369 | None:intergenic | 50.0% |
| GTGAGTCTGTGGGTAGCAAT+TGG | - | chr7_4:32973843-32973862 | Msa1150090:intron | 50.0% | |
| GATTGTCACAGCTATAGGCC+TGG | - | chr7_4:32974950-32974969 | Msa1150090:intron | 50.0% | |
| ACAGCTATAGGCCTGGAACA+TGG | - | chr7_4:32974957-32974976 | Msa1150090:intron | 50.0% | |
| ! | GCCTGGAACATGGACTGAAA+AGG | - | chr7_4:32974967-32974986 | Msa1150090:intron | 50.0% |
| ! | GCCTTTTCAGTCCATGTTCC+AGG | + | chr7_4:32974971-32974990 | None:intergenic | 50.0% |
| CACTTGGACCAACCAGTATG+AGG | + | chr7_4:32975039-32975058 | None:intergenic | 50.0% | |
| ! | CTCATACTGGTTGGTCCAAG+TGG | - | chr7_4:32975037-32975056 | Msa1150090:intron | 50.0% |
| ! | TGGTTGGTCCAAGTGGATCT+GGG | - | chr7_4:32975044-32975063 | Msa1150090:intron | 50.0% |
| ! | GTGCTTTTCCCAGATCCACT+TGG | + | chr7_4:32975055-32975074 | None:intergenic | 50.0% |
| GAATGTTGGGATGGGATAGC+AGG | - | chr7_4:32976560-32976579 | Msa1150090:intron | 50.0% | |
| CTACGGCAGATTCAGTCACT+AGG | + | chr7_4:32977302-32977321 | None:intergenic | 50.0% | |
| GTGACTGAATCTGCCGTAGT+TGG | - | chr7_4:32977303-32977322 | Msa1150090:intron | 50.0% | |
| !! | TGGTGGATTGTAGGACTCCT+TGG | - | chr7_4:32978288-32978307 | Msa1150090:five_prime_UTR | 50.0% |
| TGTCAGACACGACACCGACA+CGG | + | chr7_4:32973327-32973346 | None:intergenic | 55.0% | |
| TCGTGTCTGACACCGAGACA+CGG | - | chr7_4:32973335-32973354 | Msa1150090:CDS | 55.0% | |
| ACCGAGACACGGCTAATCTG+AGG | - | chr7_4:32973346-32973365 | Msa1150090:CDS | 55.0% | |
| ! | CATCGGAAGCGTGAGTCTGT+GGG | - | chr7_4:32973833-32973852 | Msa1150090:intron | 55.0% |
| CAGGGATAGTCGAGGTTTGC+AGG | - | chr7_4:32974052-32974071 | Msa1150090:intron | 55.0% | |
| ! | CTGGTTGGTCCAAGTGGATC+TGG | - | chr7_4:32975043-32975062 | Msa1150090:intron | 55.0% |
| !! | GTCATGGAGAGCTTGTTGCC+AGG | - | chr7_4:32975419-32975438 | Msa1150090:intron | 55.0% |
| GAGCTCGGTCAGAGAGTGAT+AGG | + | chr7_4:32977108-32977127 | None:intergenic | 55.0% | |
| CTACTGCAAGTGTGCGGTTG+AGG | + | chr7_4:32977787-32977806 | None:intergenic | 55.0% | |
| TCACGACACGCGTCCAAATG+TGG | - | chr7_4:32977813-32977832 | Msa1150090:intron | 55.0% | |
| GACACGCGTCCAAATGTGGA+AGG | - | chr7_4:32977817-32977836 | Msa1150090:intron | 55.0% | |
| CTGGGAGTGGGTGGAGAAGA+AGG | + | chr7_4:32973110-32973129 | None:intergenic | 60.0% | |
| CTTCTTCTCCACCCACTCCC+AGG | - | chr7_4:32973108-32973127 | Msa1150090:three_prime_UTR | 60.0% | |
| ! | GCATCGGAAGCGTGAGTCTG+TGG | - | chr7_4:32973832-32973851 | Msa1150090:intron | 60.0% |
| !! | CTGGTGGTGCTTTGGAGGCA+CGG | - | chr7_4:32975661-32975680 | Msa1150090:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 32972770 | 32978481 | 32972770 | ID=Msa1150090;Name=Msa1150090 |
| chr7_4 | mRNA | 32972770 | 32978481 | 32972770 | ID=Msa1150090-mRNA-1;Parent=Msa1150090;Name=Msa1150090-mRNA-1;_AED=0.08;_eAED=0.08;_QI=196|0.88|0.8|1|0.88|0.8|10|473|413 |
| chr7_4 | exon | 32972770 | 32972901 | 32972770 | ID=Msa1150090-mRNA-1:exon:7867;Parent=Msa1150090-mRNA-1 |
| chr7_4 | exon | 32972935 | 32973578 | 32972935 | ID=Msa1150090-mRNA-1:exon:7866;Parent=Msa1150090-mRNA-1 |
| chr7_4 | exon | 32973859 | 32973962 | 32973859 | ID=Msa1150090-mRNA-1:exon:7865;Parent=Msa1150090-mRNA-1 |
| chr7_4 | exon | 32974058 | 32974183 | 32974058 | ID=Msa1150090-mRNA-1:exon:7864;Parent=Msa1150090-mRNA-1 |
| chr7_4 | exon | 32975516 | 32975730 | 32975516 | ID=Msa1150090-mRNA-1:exon:7863;Parent=Msa1150090-mRNA-1 |
| chr7_4 | exon | 32975811 | 32975985 | 32975811 | ID=Msa1150090-mRNA-1:exon:7862;Parent=Msa1150090-mRNA-1 |
| chr7_4 | exon | 32976109 | 32976225 | 32976109 | ID=Msa1150090-mRNA-1:exon:7861;Parent=Msa1150090-mRNA-1 |
| chr7_4 | exon | 32977063 | 32977196 | 32977063 | ID=Msa1150090-mRNA-1:exon:7860;Parent=Msa1150090-mRNA-1 |
| chr7_4 | exon | 32978122 | 32978155 | 32978122 | ID=Msa1150090-mRNA-1:exon:7859;Parent=Msa1150090-mRNA-1 |
| chr7_4 | exon | 32978252 | 32978481 | 32978252 | ID=Msa1150090-mRNA-1:exon:7858;Parent=Msa1150090-mRNA-1 |
| chr7_4 | five_prime_UTR | 32978286 | 32978481 | 32978286 | ID=Msa1150090-mRNA-1:five_prime_utr;Parent=Msa1150090-mRNA-1 |
| chr7_4 | CDS | 32978252 | 32978285 | 32978252 | ID=Msa1150090-mRNA-1:cds;Parent=Msa1150090-mRNA-1 |
| chr7_4 | CDS | 32978122 | 32978155 | 32978122 | ID=Msa1150090-mRNA-1:cds;Parent=Msa1150090-mRNA-1 |
| chr7_4 | CDS | 32977063 | 32977196 | 32977063 | ID=Msa1150090-mRNA-1:cds;Parent=Msa1150090-mRNA-1 |
| chr7_4 | CDS | 32976109 | 32976225 | 32976109 | ID=Msa1150090-mRNA-1:cds;Parent=Msa1150090-mRNA-1 |
| chr7_4 | CDS | 32975811 | 32975985 | 32975811 | ID=Msa1150090-mRNA-1:cds;Parent=Msa1150090-mRNA-1 |
| chr7_4 | CDS | 32975516 | 32975730 | 32975516 | ID=Msa1150090-mRNA-1:cds;Parent=Msa1150090-mRNA-1 |
| chr7_4 | CDS | 32974058 | 32974183 | 32974058 | ID=Msa1150090-mRNA-1:cds;Parent=Msa1150090-mRNA-1 |
| chr7_4 | CDS | 32973859 | 32973962 | 32973859 | ID=Msa1150090-mRNA-1:cds;Parent=Msa1150090-mRNA-1 |
| chr7_4 | CDS | 32973276 | 32973578 | 32973276 | ID=Msa1150090-mRNA-1:cds;Parent=Msa1150090-mRNA-1 |
| chr7_4 | three_prime_UTR | 32972935 | 32973275 | 32972935 | ID=Msa1150090-mRNA-1:three_prime_utr;Parent=Msa1150090-mRNA-1 |
| chr7_4 | three_prime_UTR | 32972770 | 32972901 | 32972770 | ID=Msa1150090-mRNA-1:three_prime_utr;Parent=Msa1150090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
