AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1061270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1061270 MtrunA17_Chr7g0238971 82.353 476 75 5 1 471 1 472 0.0 752
Msa1061270 MtrunA17_Chr7g0238961 79.074 497 80 4 6 479 260 755 0.0 752
Msa1061270 MtrunA17_Chr7g0238961 61.963 163 59 2 6 165 3 165 1.55e-56 200
Msa1061270 MtrunA17_Chr7g0239921 67.081 483 147 6 1 479 27 501 0.0 612
Msa1061270 MtrunA17_Chr7g0239851 56.042 480 197 8 8 479 5 478 1.63e-165 476
Msa1061270 MtrunA17_Chr7g0239731 54.752 484 199 6 7 479 4 478 3.77e-162 467
Msa1061270 MtrunA17_Chr7g0239891 53.475 518 189 12 1 478 1 506 1.30e-158 459
Msa1061270 MtrunA17_Chr7g0239911 53.961 467 189 12 1 449 1 459 1.26e-153 445
Msa1061270 MtrunA17_Chr3g0078631 52.024 494 169 11 1 473 10 456 9.17e-150 435
Msa1061270 MtrunA17_Chr7g0239831 52.632 494 210 10 1 479 1 485 5.56e-149 434
Msa1061270 MtrunA17_Chr7g0239841 54.751 442 182 9 1 432 1 434 9.38e-145 421
Msa1061270 MtrunA17_Chr7g0239901 54.845 485 198 12 10 478 36 515 1.65e-140 413
Msa1061270 MtrunA17_Chr7g0241421 41.247 497 252 11 4 477 6 485 9.11e-110 336
Msa1061270 MtrunA17_Chr7g0241331 42.245 490 244 10 13 472 5 485 6.05e-107 327
Msa1061270 MtrunA17_Chr7g0239791 57.931 290 105 3 191 479 5 278 1.00e-104 313
Msa1061270 MtrunA17_Chr7g0239791 28.899 218 133 7 12 227 68 265 3.76e-15 75.9
Msa1061270 MtrunA17_Chr7g0241161 40.204 490 212 11 1 472 1 427 1.12e-92 288
Msa1061270 MtrunA17_Chr7g0241431 39.337 483 226 11 24 475 7 453 1.27e-92 288
Msa1061270 MtrunA17_Chr7g0239861 43.779 434 188 13 68 478 4 404 7.07e-92 285
Msa1061270 MtrunA17_Chr7g0237451 36.832 505 265 15 1 479 1 477 8.69e-91 284
Msa1061270 MtrunA17_Chr1g0166321 36.667 480 245 11 3 456 5 451 9.77e-83 264
Msa1061270 MtrunA17_Chr7g0218371 36.994 519 217 16 1 479 1 449 1.58e-82 262
Msa1061270 MtrunA17_Chr7g0241261 37.100 469 234 11 11 464 8 430 3.51e-80 256
Msa1061270 MtrunA17_Chr7g0241251 35.394 469 244 13 1 449 1 430 3.76e-78 251
Msa1061270 MtrunA17_Chr3g0110221 39.946 373 167 9 95 459 7 330 8.30e-73 235
Msa1061270 MtrunA17_Chr4g0008511 33.922 510 287 16 6 479 2 497 6.11e-71 233
Msa1061270 MtrunA17_Chr7g0241201 40.496 363 198 7 1 347 1 361 1.01e-69 227
Msa1061270 MtrunA17_Chr7g0239761 45.296 287 121 6 1 280 14 271 4.91e-65 211
Msa1061270 MtrunA17_Chr7g0239761 26.244 221 131 6 254 471 30 221 1.32e-11 65.5
Msa1061270 MtrunA17_Chr7g0241291 39.275 331 163 8 159 474 11 318 2.73e-61 203
Msa1061270 MtrunA17_Chr7g0239741 46.667 255 102 6 233 479 2 230 6.91e-61 199
Msa1061270 MtrunA17_Chr7g0241271 41.369 336 172 10 2 319 4 332 1.03e-59 199
Msa1061270 MtrunA17_Chr7g0241271 29.187 209 130 6 252 449 13 214 3.30e-13 70.5
Msa1061270 MtrunA17_Chr4g0007631 31.478 521 300 17 1 478 1 507 1.73e-58 201
Msa1061270 MtrunA17_Chr7g0239751 52.381 210 86 2 10 215 30 229 2.60e-57 189
Msa1061270 MtrunA17_Chr4g0008481 31.931 523 293 16 6 478 3 512 3.52e-56 195
Msa1061270 MtrunA17_Chr7g0263451 43.130 262 142 3 211 468 2 260 1.05e-53 181
Msa1061270 MtrunA17_Chr4g0007271 29.865 519 280 16 1 478 1 476 6.41e-51 180
Msa1061270 MtrunA17_Chr7g0241511 35.000 360 167 8 156 468 14 353 1.21e-48 171
Msa1061270 MtrunA17_Chr4g0007251 30.906 508 283 17 1 472 1 476 2.51e-48 173
Msa1061270 MtrunA17_Chr7g0241361 45.259 232 102 5 12 240 16 225 4.04e-48 166
Msa1061270 MtrunA17_Chr4g0007341 31.056 483 277 18 5 454 2 461 8.47e-46 166
Msa1061270 MtrunA17_Chr7g0241311 42.788 208 109 3 10 208 8 214 9.06e-45 157
Msa1061270 MtrunA17_Chr7g0241311 32.203 177 110 5 253 420 10 185 1.38e-14 73.6
Msa1061270 MtrunA17_Chr7g0241351 44.608 204 104 3 12 211 16 214 1.25e-43 153
Msa1061270 MtrunA17_Chr7g0241211 37.089 213 105 3 256 468 3 186 2.50e-36 132
Msa1061270 MtrunA17_Chr2g0291981 49.167 120 59 1 2 119 4 123 4.47e-31 117
Msa1061270 MtrunA17_Chr2g0291981 42.353 85 43 2 253 332 14 97 2.77e-13 67.4
Msa1061270 MtrunA17_Chr7g0241321 39.474 190 106 2 294 474 1 190 6.45e-30 115
Msa1061270 MtrunA17_Chr7g0241231 44.526 137 74 1 11 145 6 142 4.30e-28 109
Msa1061270 MtrunA17_Chr8g0345251 26.400 375 251 11 112 472 15 378 5.76e-27 112
Msa1061270 MtrunA17_Chr4g0007321 33.217 286 150 9 211 468 11 283 3.20e-24 102
Msa1061270 MtrunA17_Chr8g0355351 31.855 248 135 10 3 233 8 238 2.04e-22 95.9
Msa1061270 MtrunA17_Chr7g0237481 36.601 153 81 3 250 402 11 147 2.34e-21 91.3
Msa1061270 MtrunA17_Chr7g0241171 37.576 165 74 4 304 468 8 143 3.38e-21 89.7
Msa1061270 MtrunA17_Chr7g0241181 43.158 95 54 0 253 347 14 108 3.05e-20 86.3
Msa1061270 MtrunA17_Chr4g0007221 31.120 241 128 5 253 478 9 226 4.48e-20 89.4
Msa1061270 MtrunA17_Chr1g0212741 31.325 249 143 7 1 232 1 238 7.76e-20 88.6
Msa1061270 MtrunA17_Chr1g0212741 26.582 237 137 5 253 466 11 233 3.13e-19 87.0
Msa1061270 MtrunA17_Chr4g0007231 31.466 232 126 8 6 212 3 226 1.30e-19 87.8
Msa1061270 MtrunA17_Chr1g0150201 37.162 148 85 5 95 238 7 150 2.10e-19 85.1
Msa1061270 MtrunA17_Chr1g0150211 38.614 101 62 0 256 356 3 103 1.68e-18 82.4
Msa1061270 MtrunA17_Chr7g0229201 27.165 254 140 5 5 232 3 237 1.89e-17 81.6
Msa1061270 MtrunA17_Chr0c02g0489781 27.165 254 140 5 5 232 3 237 1.89e-17 81.6
Msa1061270 MtrunA17_Chr7g0263461 66.000 50 17 0 6 55 33 82 2.54e-14 68.6
Msa1061270 MtrunA17_Chr2g0292001 30.120 166 102 4 297 453 4 164 1.55e-13 69.7
Msa1061270 MtrunA17_Chr7g0241301 34.091 132 62 3 1 127 1 112 2.11e-13 67.0
Msa1061270 MtrunA17_Chr1g0212771 27.670 206 112 7 1 177 1 198 1.62e-12 66.6
Msa1061270 MtrunA17_Chr2g0291991 38.835 103 56 2 193 288 17 119 4.59e-12 63.2
Msa1061270 MtrunA17_Chr7g0241501 60.870 46 18 0 18 63 1 46 9.48e-12 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1061270 AT3G09140.2 32.443 524 275 19 1 474 1 495 1.27e-62 212
Msa1061270 AT5G01120.1 32.540 504 270 15 13 471 10 488 3.61e-59 203
Msa1061270 AT3G09140.1 30.797 552 275 20 1 474 1 523 1.75e-57 199
Msa1061270 AT5G01150.1 30.485 515 283 14 7 478 4 486 4.65e-55 192
Msa1061270 AT5G01130.1 32.179 491 272 16 7 479 4 451 2.79e-52 183
Msa1061270 AT5G01140.1 29.920 498 281 12 7 479 4 458 1.69e-50 179
Msa1061270 AT3G09110.1 35.556 315 182 8 14 314 11 318 4.32e-50 174
Msa1061270 AT5G43240.1 29.762 504 282 13 13 468 10 489 4.56e-50 179
Msa1061270 AT5G43240.3 29.762 504 282 13 13 468 10 489 4.56e-50 179
Msa1061270 AT5G43240.4 29.762 504 282 13 13 468 10 489 4.56e-50 179
Msa1061270 AT3G09120.1 34.877 324 169 9 11 307 5 313 8.35e-45 159
Msa1061270 AT3G09120.1 28.889 225 148 5 253 466 6 229 7.54e-13 69.7
Msa1061270 AT5G37320.1 29.142 501 287 16 13 474 10 481 1.80e-37 144
Msa1061270 AT5G43240.2 26.970 330 200 7 165 468 31 345 8.24e-19 88.2

Find 91 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAGAATATTATTATATT+AGG 0.195980 7_2:+50435775 Msa1061270:CDS
TAACTAGCTTTAGATTGATT+TGG 0.246947 7_2:-50435401 None:intergenic
CATCCAATGATGTCAAATAT+TGG 0.278089 7_2:-50435596 None:intergenic
GTCGTATGTTTCAAGATTCT+TGG 0.279012 7_2:+50436233 Msa1061270:three_prime_UTR
ATATTATTATATTAGGGATT+TGG 0.284193 7_2:+50435782 Msa1061270:CDS
GGTGGAATTGTACGGATATT+TGG 0.289019 7_2:+50435510 Msa1061270:CDS
CTTGACTCCTATTTCAGCTT+TGG 0.294838 7_2:+50435899 Msa1061270:CDS
AATAGAATATTATTATATTA+GGG 0.320844 7_2:+50435776 Msa1061270:CDS
TTTAGTCTGTTCACGGAGTT+TGG 0.330311 7_2:+50435102 Msa1061270:CDS
TTGACTCCTATTTCAGCTTT+GGG 0.334930 7_2:+50435900 Msa1061270:CDS
AGTAAACCCAAAGCTGAAAT+AGG 0.338285 7_2:-50435906 None:intergenic
GTACAACAGTATAGTTGATT+TGG 0.340416 7_2:+50435566 Msa1061270:CDS
GGGAGAGGTTTAAGGAAAAT+TGG 0.345259 7_2:-50434997 None:intergenic
TTATCGAAGTGTTGCAGATC+TGG 0.352603 7_2:+50434762 Msa1061270:CDS
CCTGGTGTTCATGTATATTA+TGG 0.356034 7_2:+50435693 Msa1061270:CDS
TTCGTTCAAAAGAAGTTTCA+AGG 0.367404 7_2:-50434590 None:intergenic
CTTGTATAGTCAATACAGTT+TGG 0.367447 7_2:-50435078 None:intergenic
AACTCCTCTTAATGATTTGA+AGG 0.368693 7_2:+50435941 Msa1061270:CDS
AAACCAATATTTGACATCAT+TGG 0.370183 7_2:+50435593 Msa1061270:CDS
ATCTGCCTTAACAAATGGTT+TGG 0.386717 7_2:+50436159 Msa1061270:CDS
TTTAGGAACCATTGCGAGAT+TGG 0.390984 7_2:+50434687 Msa1061270:CDS
AAAGTCTTGTTTGCTGAAGC+AGG 0.408169 7_2:+50434622 Msa1061270:CDS
TTACCTAATGTGATGATTCC+TGG 0.408549 7_2:+50435816 Msa1061270:CDS
AGCTTCTTAACAATGCCTTT+AGG 0.411653 7_2:+50434670 Msa1061270:CDS
TTGTGTGATGTTGAAATTAG+TGG 0.420260 7_2:+50435372 Msa1061270:CDS
TCAACATCTGCCTTAACAAA+TGG 0.422887 7_2:+50436154 Msa1061270:CDS
TGCTTGCTTAACTTTAACTG+TGG 0.427981 7_2:-50435651 None:intergenic
TCACATGTTAACTGAAGTTA+AGG 0.428371 7_2:+50436183 Msa1061270:CDS
CATCATTGGATGCGAAGAAC+AGG 0.428551 7_2:+50435607 Msa1061270:CDS
GCAGTGTCTTAGCATATTGA+AGG 0.430801 7_2:+50436120 Msa1061270:intron
CAAATCTGTCAAGGTTGTCT+TGG 0.431681 7_2:-50435307 None:intergenic
TGTTCCTTGGGAAGCATCAA+TGG 0.434367 7_2:+50435540 Msa1061270:CDS
TACACCATTAACAAATCCTT+GGG 0.434973 7_2:-50435019 None:intergenic
ATTTGGTGGGAATTGTTCCT+TGG 0.434997 7_2:+50435527 Msa1061270:CDS
TCACCAGGAATCATCACATT+AGG 0.443922 7_2:-50435819 None:intergenic
TGAACACCAGGATCAAGAAT+TGG 0.446975 7_2:-50435681 None:intergenic
ATATTACCAATTCTTGATCC+TGG 0.456535 7_2:+50435675 Msa1061270:CDS
GTGAGCCAAACCATTTGTTA+AGG 0.458136 7_2:-50436164 None:intergenic
TACAAGCTTTAGTCTGTTCA+CGG 0.462133 7_2:+50435095 Msa1061270:CDS
TCTGAATGTCACCAAAGAAA+AGG 0.469867 7_2:+50435158 Msa1061270:CDS
TTTGGTGGGAATTGTTCCTT+GGG 0.475646 7_2:+50435528 Msa1061270:CDS
CTACACCATTAACAAATCCT+TGG 0.482540 7_2:-50435020 None:intergenic
TTCCTTTGGGTGGAATTGTA+CGG 0.485161 7_2:+50435502 Msa1061270:CDS
AACCATCCCTCGAGAAATCA+AGG 0.489053 7_2:+50435343 Msa1061270:CDS
TTTCTTACATTTCCTTTGGG+TGG 0.496782 7_2:+50435492 Msa1061270:CDS
CTTGTTTGCTGAAGCAGGGA+AGG 0.500458 7_2:+50434627 Msa1061270:CDS
AACCTTGATTTCTCGAGGGA+TGG 0.500864 7_2:-50435345 None:intergenic
GCTTGCTTAACTTTAACTGT+GGG 0.513623 7_2:-50435650 None:intergenic
AACAAGGTATTGTATGCTCA+AGG 0.515072 7_2:+50435438 Msa1061270:CDS
AGTTATCACAATCGGCATCA+AGG 0.517950 7_2:+50435968 Msa1061270:CDS
TCTGTAGCAAAATACATAGC+TGG 0.536774 7_2:-50435858 None:intergenic
GTAGAGAAAGAATCTAACAT+AGG 0.539383 7_2:+50434709 Msa1061270:CDS
CCTGGTGATGGTTATGTCAA+GGG 0.540431 7_2:+50435834 Msa1061270:CDS
TAGAGAAAGAATCTAACATA+GGG 0.547818 7_2:+50434710 Msa1061270:CDS
GGAATTGTACGGATATTTGG+TGG 0.549196 7_2:+50435513 Msa1061270:CDS
TTCAAAACTAAATAAAACTT+CGG 0.550360 7_2:-50436325 None:intergenic
CAAAGCTGAAATAGGAGTCA+AGG 0.552327 7_2:-50435898 None:intergenic
TTTAACTGTGGGGCAATGCA+AGG 0.554812 7_2:-50435639 None:intergenic
CCCTAGTTCGGTAAAAGAAG+TGG 0.558153 7_2:+50435134 Msa1061270:CDS
CCATAATATACATGAACACC+AGG 0.558310 7_2:-50435693 None:intergenic
GTATGTTTCAAGATTCTTGG+AGG 0.561719 7_2:+50436236 Msa1061270:three_prime_UTR
TTTCTCTACCAATCTCGCAA+TGG 0.567743 7_2:-50434695 None:intergenic
AAGTCTTGTTTGCTGAAGCA+GGG 0.569553 7_2:+50434623 Msa1061270:CDS
TCCTGGTGATGGTTATGTCA+AGG 0.575341 7_2:+50435833 Msa1061270:CDS
AGATAAACCTTGATTTCTCG+AGG 0.576652 7_2:-50435350 None:intergenic
CCCTTGACATAACCATCACC+AGG 0.582930 7_2:-50435834 None:intergenic
AACATAGGGCAAGTTACAGT+CGG 0.583059 7_2:+50434724 Msa1061270:CDS
AATCTCGCAATGGTTCCTAA+AGG 0.583079 7_2:-50434685 None:intergenic
GAATTGTACGGATATTTGGT+GGG 0.585029 7_2:+50435514 Msa1061270:CDS
CATGTTAACTGAAGTTAAGG+AGG 0.596174 7_2:+50436186 Msa1061270:CDS
ATCCGTACAATTCCACCCAA+AGG 0.601452 7_2:-50435504 None:intergenic
AAAGCTGAAATAGGAGTCAA+GGG 0.602102 7_2:-50435897 None:intergenic
GCACATGTGAAGTACTTCGT+TGG 0.605004 7_2:-50434886 None:intergenic
TGATGTGATCATCTCACGAT+AGG 0.606140 7_2:-50434926 None:intergenic
AATGCTGCTAATCAACTCAT+CGG 0.629544 7_2:+50434819 Msa1061270:CDS
TATAAGAAAATCAGATAACA+AGG 0.631180 7_2:+50435422 Msa1061270:CDS
AAGTTCTTATCAGTTTAACA+TGG 0.634778 7_2:+50434531 Msa1061270:exon
TCTTGGAGGAAAGTTGACAA+TGG 0.635584 7_2:+50436250 Msa1061270:three_prime_UTR
GACAAGGAGACAATAATGCT+AGG 0.639191 7_2:+50436272 Msa1061270:three_prime_UTR
GATAAACCTTGATTTCTCGA+GGG 0.640297 7_2:-50435349 None:intergenic
ACAAGGTATTGTATGCTCAA+GGG 0.641517 7_2:+50435439 Msa1061270:CDS
TACTACTTCTACTCAAGCAG+AGG 0.643833 7_2:+50434558 Msa1061270:CDS
CTTGCTTAACTTTAACTGTG+GGG 0.646219 7_2:-50435649 None:intergenic
AGTGTAAAAGAACGACCACA+TGG 0.649415 7_2:-50434973 None:intergenic
AATGTGATGATTCCTGGTGA+TGG 0.650008 7_2:+50435822 Msa1061270:CDS
AGGAAAGTTGACAATGGACA+AGG 0.666816 7_2:+50436256 Msa1061270:three_prime_UTR
CAAACCATTGATGCTTCCCA+AGG 0.669295 7_2:-50435544 None:intergenic
GATAAACATAAATGTCCATG+TGG 0.678699 7_2:+50434958 Msa1061270:CDS
CACCATTAACAAATCCTTGG+GGG 0.679874 7_2:-50435017 None:intergenic
ACACCATTAACAAATCCTTG+GGG 0.695095 7_2:-50435018 None:intergenic
TATCACAATCGGCATCAAGG+AGG 0.731245 7_2:+50435971 Msa1061270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATAGAATATTATTATATT+AGG + chr7_2:50435775-50435794 Msa1061270:CDS 10.0%
!!! ATCTAATATAAATTTTACTA+TGG - chr7_2:50436001-50436020 None:intergenic 10.0%
!! GAATAGAATATTATTATATT+AGG + chr7_2:50435775-50435794 Msa1061270:CDS 10.0%
!!! ATCTAATATAAATTTTACTA+TGG - chr7_2:50436001-50436020 None:intergenic 10.0%
!! ATATTATTATATTAGGGATT+TGG + chr7_2:50435782-50435801 Msa1061270:CDS 15.0%
!! TTCAAAACTAAATAAAACTT+CGG - chr7_2:50436328-50436347 None:intergenic 15.0%
!!! ATTTAGTTTTGAATTTTGAA+TGG + chr7_2:50436335-50436354 Msa1061270:three_prime_UTR 15.0%
!! ATATTATTATATTAGGGATT+TGG + chr7_2:50435782-50435801 Msa1061270:CDS 15.0%
!! TTCAAAACTAAATAAAACTT+CGG - chr7_2:50436328-50436347 None:intergenic 15.0%
!!! ATTTAGTTTTGAATTTTGAA+TGG + chr7_2:50436335-50436354 Msa1061270:three_prime_UTR 15.0%
!! ATCAATCAAAAAATTAAGAG+AGG - chr7_2:50435229-50435248 None:intergenic 20.0%
!! TATAAGAAAATCAGATAACA+AGG + chr7_2:50435422-50435441 Msa1061270:CDS 20.0%
!!! CATTTTCAAATTATCAAATC+TGG + chr7_2:50435753-50435772 Msa1061270:CDS 20.0%
!! ATCAATCAAAAAATTAAGAG+AGG - chr7_2:50435229-50435248 None:intergenic 20.0%
!! TATAAGAAAATCAGATAACA+AGG + chr7_2:50435422-50435441 Msa1061270:CDS 20.0%
!!! CATTTTCAAATTATCAAATC+TGG + chr7_2:50435753-50435772 Msa1061270:CDS 20.0%
! AAGTTCTTATCAGTTTAACA+TGG + chr7_2:50434531-50434550 Msa1061270:exon 25.0%
!! AAACTTCTTTTGAACGAAAA+TGG + chr7_2:50434595-50434614 Msa1061270:CDS 25.0%
! TAGAGAAAGAATCTAACATA+GGG + chr7_2:50434710-50434729 Msa1061270:CDS 25.0%
!!! TAACTAGCTTTAGATTGATT+TGG - chr7_2:50435404-50435423 None:intergenic 25.0%
!! AAGTTTTCTTACATTTCCTT+TGG + chr7_2:50435488-50435507 Msa1061270:CDS 25.0%
!! AGTTTTCTTACATTTCCTTT+GGG + chr7_2:50435489-50435508 Msa1061270:CDS 25.0%
! AAACCAATATTTGACATCAT+TGG + chr7_2:50435593-50435612 Msa1061270:CDS 25.0%
!! TTTTCCTTCAAATCATTAAG+AGG - chr7_2:50435948-50435967 None:intergenic 25.0%
! AAGGAAAAAGTTATCACAAT+CGG + chr7_2:50435960-50435979 Msa1061270:CDS 25.0%
! AAGTTCTTATCAGTTTAACA+TGG + chr7_2:50434531-50434550 Msa1061270:exon 25.0%
!! AAACTTCTTTTGAACGAAAA+TGG + chr7_2:50434595-50434614 Msa1061270:CDS 25.0%
! TAGAGAAAGAATCTAACATA+GGG + chr7_2:50434710-50434729 Msa1061270:CDS 25.0%
!!! TAACTAGCTTTAGATTGATT+TGG - chr7_2:50435404-50435423 None:intergenic 25.0%
!! AAGTTTTCTTACATTTCCTT+TGG + chr7_2:50435488-50435507 Msa1061270:CDS 25.0%
!! AGTTTTCTTACATTTCCTTT+GGG + chr7_2:50435489-50435508 Msa1061270:CDS 25.0%
! AAACCAATATTTGACATCAT+TGG + chr7_2:50435593-50435612 Msa1061270:CDS 25.0%
!! TTTTCCTTCAAATCATTAAG+AGG - chr7_2:50435948-50435967 None:intergenic 25.0%
! AAGGAAAAAGTTATCACAAT+CGG + chr7_2:50435960-50435979 Msa1061270:CDS 25.0%
TTCGTTCAAAAGAAGTTTCA+AGG - chr7_2:50434593-50434612 None:intergenic 30.0%
GTAGAGAAAGAATCTAACAT+AGG + chr7_2:50434709-50434728 Msa1061270:CDS 30.0%
GATAAACATAAATGTCCATG+TGG + chr7_2:50434958-50434977 Msa1061270:CDS 30.0%
TACACCATTAACAAATCCTT+GGG - chr7_2:50435022-50435041 None:intergenic 30.0%
CTTGTATAGTCAATACAGTT+TGG - chr7_2:50435081-50435100 None:intergenic 30.0%
! CAACTACAAAACCTTTTCTT+TGG - chr7_2:50435172-50435191 None:intergenic 30.0%
!! ACCTTGACAGATTTGTTTTT+AGG + chr7_2:50435315-50435334 Msa1061270:CDS 30.0%
!!! CCTTGACAGATTTGTTTTTA+GGG + chr7_2:50435316-50435335 Msa1061270:CDS 30.0%
TTGTGTGATGTTGAAATTAG+TGG + chr7_2:50435372-50435391 Msa1061270:CDS 30.0%
GTACAACAGTATAGTTGATT+TGG + chr7_2:50435566-50435585 Msa1061270:CDS 30.0%
CATCCAATGATGTCAAATAT+TGG - chr7_2:50435599-50435618 None:intergenic 30.0%
ATATTACCAATTCTTGATCC+TGG + chr7_2:50435675-50435694 Msa1061270:CDS 30.0%
! GTATTTTGCTACAGATGATT+TGG + chr7_2:50435866-50435885 Msa1061270:CDS 30.0%
! ATTAAGAGGAGTTTTCAATC+GGG - chr7_2:50435934-50435953 None:intergenic 30.0%
! CATTAAGAGGAGTTTTCAAT+CGG - chr7_2:50435935-50435954 None:intergenic 30.0%
AACTCCTCTTAATGATTTGA+AGG + chr7_2:50435941-50435960 Msa1061270:CDS 30.0%
TTATTTAAATGTTCTACGCG+TGG + chr7_2:50436036-50436055 Msa1061270:intron 30.0%
TATTTAAATGTTCTACGCGT+GGG + chr7_2:50436037-50436056 Msa1061270:intron 30.0%
TCACATGTTAACTGAAGTTA+AGG + chr7_2:50436183-50436202 Msa1061270:CDS 30.0%
TTCGTTCAAAAGAAGTTTCA+AGG - chr7_2:50434593-50434612 None:intergenic 30.0%
GTAGAGAAAGAATCTAACAT+AGG + chr7_2:50434709-50434728 Msa1061270:CDS 30.0%
GATAAACATAAATGTCCATG+TGG + chr7_2:50434958-50434977 Msa1061270:CDS 30.0%
TACACCATTAACAAATCCTT+GGG - chr7_2:50435022-50435041 None:intergenic 30.0%
CTTGTATAGTCAATACAGTT+TGG - chr7_2:50435081-50435100 None:intergenic 30.0%
! CAACTACAAAACCTTTTCTT+TGG - chr7_2:50435172-50435191 None:intergenic 30.0%
!! ACCTTGACAGATTTGTTTTT+AGG + chr7_2:50435315-50435334 Msa1061270:CDS 30.0%
!!! CCTTGACAGATTTGTTTTTA+GGG + chr7_2:50435316-50435335 Msa1061270:CDS 30.0%
TTGTGTGATGTTGAAATTAG+TGG + chr7_2:50435372-50435391 Msa1061270:CDS 30.0%
GTACAACAGTATAGTTGATT+TGG + chr7_2:50435566-50435585 Msa1061270:CDS 30.0%
CATCCAATGATGTCAAATAT+TGG - chr7_2:50435599-50435618 None:intergenic 30.0%
ATATTACCAATTCTTGATCC+TGG + chr7_2:50435675-50435694 Msa1061270:CDS 30.0%
! GTATTTTGCTACAGATGATT+TGG + chr7_2:50435866-50435885 Msa1061270:CDS 30.0%
! ATTAAGAGGAGTTTTCAATC+GGG - chr7_2:50435934-50435953 None:intergenic 30.0%
! CATTAAGAGGAGTTTTCAAT+CGG - chr7_2:50435935-50435954 None:intergenic 30.0%
AACTCCTCTTAATGATTTGA+AGG + chr7_2:50435941-50435960 Msa1061270:CDS 30.0%
TTATTTAAATGTTCTACGCG+TGG + chr7_2:50436036-50436055 Msa1061270:intron 30.0%
TATTTAAATGTTCTACGCGT+GGG + chr7_2:50436037-50436056 Msa1061270:intron 30.0%
TCACATGTTAACTGAAGTTA+AGG + chr7_2:50436183-50436202 Msa1061270:CDS 30.0%
AGCTTCTTAACAATGCCTTT+AGG + chr7_2:50434670-50434689 Msa1061270:CDS 35.0%
AATGCTGCTAATCAACTCAT+CGG + chr7_2:50434819-50434838 Msa1061270:CDS 35.0%
ACACCATTAACAAATCCTTG+GGG - chr7_2:50435021-50435040 None:intergenic 35.0%
CTACACCATTAACAAATCCT+TGG - chr7_2:50435023-50435042 None:intergenic 35.0%
! TACAAGCTTTAGTCTGTTCA+CGG + chr7_2:50435095-50435114 Msa1061270:CDS 35.0%
TGGCATAAAAAACCCTAGTT+CGG + chr7_2:50435122-50435141 Msa1061270:CDS 35.0%
TCTGAATGTCACCAAAGAAA+AGG + chr7_2:50435158-50435177 Msa1061270:CDS 35.0%
! CTTCTACTGTTTTATACTGC+AGG + chr7_2:50435254-50435273 Msa1061270:intron 35.0%
CCCTAAAAACAAATCTGTCA+AGG - chr7_2:50435319-50435338 None:intergenic 35.0%
GATAAACCTTGATTTCTCGA+GGG - chr7_2:50435352-50435371 None:intergenic 35.0%
AGATAAACCTTGATTTCTCG+AGG - chr7_2:50435353-50435372 None:intergenic 35.0%
!! AACAAGGTATTGTATGCTCA+AGG + chr7_2:50435438-50435457 Msa1061270:CDS 35.0%
!! ACAAGGTATTGTATGCTCAA+GGG + chr7_2:50435439-50435458 Msa1061270:CDS 35.0%
TTTCTTACATTTCCTTTGGG+TGG + chr7_2:50435492-50435511 Msa1061270:CDS 35.0%
GAATTGTACGGATATTTGGT+GGG + chr7_2:50435514-50435533 Msa1061270:CDS 35.0%
CTTGCTTAACTTTAACTGTG+GGG - chr7_2:50435652-50435671 None:intergenic 35.0%
GCTTGCTTAACTTTAACTGT+GGG - chr7_2:50435653-50435672 None:intergenic 35.0%
TGCTTGCTTAACTTTAACTG+TGG - chr7_2:50435654-50435673 None:intergenic 35.0%
CCATAATATACATGAACACC+AGG - chr7_2:50435696-50435715 None:intergenic 35.0%
CCTGGTGTTCATGTATATTA+TGG + chr7_2:50435693-50435712 Msa1061270:CDS 35.0%
TTACCTAATGTGATGATTCC+TGG + chr7_2:50435816-50435835 Msa1061270:CDS 35.0%
TCTGTAGCAAAATACATAGC+TGG - chr7_2:50435861-50435880 None:intergenic 35.0%
AAAGCTGAAATAGGAGTCAA+GGG - chr7_2:50435900-50435919 None:intergenic 35.0%
TTGACTCCTATTTCAGCTTT+GGG + chr7_2:50435900-50435919 Msa1061270:CDS 35.0%
AGTAAACCCAAAGCTGAAAT+AGG - chr7_2:50435909-50435928 None:intergenic 35.0%
ATTTAAATGTTCTACGCGTG+GGG + chr7_2:50436038-50436057 Msa1061270:intron 35.0%
TCAACATCTGCCTTAACAAA+TGG + chr7_2:50436154-50436173 Msa1061270:CDS 35.0%
ATCTGCCTTAACAAATGGTT+TGG + chr7_2:50436159-50436178 Msa1061270:CDS 35.0%
CATGTTAACTGAAGTTAAGG+AGG + chr7_2:50436186-50436205 Msa1061270:CDS 35.0%
GTCGTATGTTTCAAGATTCT+TGG + chr7_2:50436233-50436252 Msa1061270:three_prime_UTR 35.0%
GTATGTTTCAAGATTCTTGG+AGG + chr7_2:50436236-50436255 Msa1061270:three_prime_UTR 35.0%
AGCTTCTTAACAATGCCTTT+AGG + chr7_2:50434670-50434689 Msa1061270:CDS 35.0%
AATGCTGCTAATCAACTCAT+CGG + chr7_2:50434819-50434838 Msa1061270:CDS 35.0%
ACACCATTAACAAATCCTTG+GGG - chr7_2:50435021-50435040 None:intergenic 35.0%
CTACACCATTAACAAATCCT+TGG - chr7_2:50435023-50435042 None:intergenic 35.0%
! TACAAGCTTTAGTCTGTTCA+CGG + chr7_2:50435095-50435114 Msa1061270:CDS 35.0%
TGGCATAAAAAACCCTAGTT+CGG + chr7_2:50435122-50435141 Msa1061270:CDS 35.0%
TCTGAATGTCACCAAAGAAA+AGG + chr7_2:50435158-50435177 Msa1061270:CDS 35.0%
! CTTCTACTGTTTTATACTGC+AGG + chr7_2:50435254-50435273 Msa1061270:intron 35.0%
CCCTAAAAACAAATCTGTCA+AGG - chr7_2:50435319-50435338 None:intergenic 35.0%
GATAAACCTTGATTTCTCGA+GGG - chr7_2:50435352-50435371 None:intergenic 35.0%
AGATAAACCTTGATTTCTCG+AGG - chr7_2:50435353-50435372 None:intergenic 35.0%
!! AACAAGGTATTGTATGCTCA+AGG + chr7_2:50435438-50435457 Msa1061270:CDS 35.0%
!! ACAAGGTATTGTATGCTCAA+GGG + chr7_2:50435439-50435458 Msa1061270:CDS 35.0%
TTTCTTACATTTCCTTTGGG+TGG + chr7_2:50435492-50435511 Msa1061270:CDS 35.0%
GAATTGTACGGATATTTGGT+GGG + chr7_2:50435514-50435533 Msa1061270:CDS 35.0%
CTTGCTTAACTTTAACTGTG+GGG - chr7_2:50435652-50435671 None:intergenic 35.0%
GCTTGCTTAACTTTAACTGT+GGG - chr7_2:50435653-50435672 None:intergenic 35.0%
TGCTTGCTTAACTTTAACTG+TGG - chr7_2:50435654-50435673 None:intergenic 35.0%
CCATAATATACATGAACACC+AGG - chr7_2:50435696-50435715 None:intergenic 35.0%
CCTGGTGTTCATGTATATTA+TGG + chr7_2:50435693-50435712 Msa1061270:CDS 35.0%
TTACCTAATGTGATGATTCC+TGG + chr7_2:50435816-50435835 Msa1061270:CDS 35.0%
TCTGTAGCAAAATACATAGC+TGG - chr7_2:50435861-50435880 None:intergenic 35.0%
AAAGCTGAAATAGGAGTCAA+GGG - chr7_2:50435900-50435919 None:intergenic 35.0%
TTGACTCCTATTTCAGCTTT+GGG + chr7_2:50435900-50435919 Msa1061270:CDS 35.0%
AGTAAACCCAAAGCTGAAAT+AGG - chr7_2:50435909-50435928 None:intergenic 35.0%
ATTTAAATGTTCTACGCGTG+GGG + chr7_2:50436038-50436057 Msa1061270:intron 35.0%
TCAACATCTGCCTTAACAAA+TGG + chr7_2:50436154-50436173 Msa1061270:CDS 35.0%
ATCTGCCTTAACAAATGGTT+TGG + chr7_2:50436159-50436178 Msa1061270:CDS 35.0%
CATGTTAACTGAAGTTAAGG+AGG + chr7_2:50436186-50436205 Msa1061270:CDS 35.0%
GTCGTATGTTTCAAGATTCT+TGG + chr7_2:50436233-50436252 Msa1061270:three_prime_UTR 35.0%
GTATGTTTCAAGATTCTTGG+AGG + chr7_2:50436236-50436255 Msa1061270:three_prime_UTR 35.0%
TACTACTTCTACTCAAGCAG+AGG + chr7_2:50434558-50434577 Msa1061270:CDS 40.0%
!! AAAGTCTTGTTTGCTGAAGC+AGG + chr7_2:50434622-50434641 Msa1061270:CDS 40.0%
!! AAGTCTTGTTTGCTGAAGCA+GGG + chr7_2:50434623-50434642 Msa1061270:CDS 40.0%
AATCTCGCAATGGTTCCTAA+AGG - chr7_2:50434688-50434707 None:intergenic 40.0%
TTTAGGAACCATTGCGAGAT+TGG + chr7_2:50434687-50434706 Msa1061270:CDS 40.0%
TTTCTCTACCAATCTCGCAA+TGG - chr7_2:50434698-50434717 None:intergenic 40.0%
AACATAGGGCAAGTTACAGT+CGG + chr7_2:50434724-50434743 Msa1061270:CDS 40.0%
!! TTATCGAAGTGTTGCAGATC+TGG + chr7_2:50434762-50434781 Msa1061270:CDS 40.0%
TGATGTGATCATCTCACGAT+AGG - chr7_2:50434929-50434948 None:intergenic 40.0%
AGTGTAAAAGAACGACCACA+TGG - chr7_2:50434976-50434995 None:intergenic 40.0%
GGGAGAGGTTTAAGGAAAAT+TGG - chr7_2:50435000-50435019 None:intergenic 40.0%
CACCATTAACAAATCCTTGG+GGG - chr7_2:50435020-50435039 None:intergenic 40.0%
TTTAGTCTGTTCACGGAGTT+TGG + chr7_2:50435102-50435121 Msa1061270:CDS 40.0%
! CCACTTCTTTTACCGAACTA+GGG - chr7_2:50435137-50435156 None:intergenic 40.0%
! ACCACTTCTTTTACCGAACT+AGG - chr7_2:50435138-50435157 None:intergenic 40.0%
CAAATCTGTCAAGGTTGTCT+TGG - chr7_2:50435310-50435329 None:intergenic 40.0%
TTCCTTTGGGTGGAATTGTA+CGG + chr7_2:50435502-50435521 Msa1061270:CDS 40.0%
GGTGGAATTGTACGGATATT+TGG + chr7_2:50435510-50435529 Msa1061270:CDS 40.0%
GGAATTGTACGGATATTTGG+TGG + chr7_2:50435513-50435532 Msa1061270:CDS 40.0%
! ATTTGGTGGGAATTGTTCCT+TGG + chr7_2:50435527-50435546 Msa1061270:CDS 40.0%
TTTGGTGGGAATTGTTCCTT+GGG + chr7_2:50435528-50435547 Msa1061270:CDS 40.0%
TGAACACCAGGATCAAGAAT+TGG - chr7_2:50435684-50435703 None:intergenic 40.0%
TCACCAGGAATCATCACATT+AGG - chr7_2:50435822-50435841 None:intergenic 40.0%
AATGTGATGATTCCTGGTGA+TGG + chr7_2:50435822-50435841 Msa1061270:CDS 40.0%
CAAAGCTGAAATAGGAGTCA+AGG - chr7_2:50435901-50435920 None:intergenic 40.0%
CTTGACTCCTATTTCAGCTT+TGG + chr7_2:50435899-50435918 Msa1061270:CDS 40.0%
AGTTATCACAATCGGCATCA+AGG + chr7_2:50435968-50435987 Msa1061270:CDS 40.0%
TCAAACTAGTCCACCGAAAT+TGG - chr7_2:50436068-50436087 None:intergenic 40.0%
GCAGTGTCTTAGCATATTGA+AGG + chr7_2:50436120-50436139 Msa1061270:intron 40.0%
! GTGAGCCAAACCATTTGTTA+AGG - chr7_2:50436167-50436186 None:intergenic 40.0%
TCTTGGAGGAAAGTTGACAA+TGG + chr7_2:50436250-50436269 Msa1061270:three_prime_UTR 40.0%
AGGAAAGTTGACAATGGACA+AGG + chr7_2:50436256-50436275 Msa1061270:three_prime_UTR 40.0%
GACAAGGAGACAATAATGCT+AGG + chr7_2:50436272-50436291 Msa1061270:three_prime_UTR 40.0%
TACTACTTCTACTCAAGCAG+AGG + chr7_2:50434558-50434577 Msa1061270:CDS 40.0%
!! AAAGTCTTGTTTGCTGAAGC+AGG + chr7_2:50434622-50434641 Msa1061270:CDS 40.0%
!! AAGTCTTGTTTGCTGAAGCA+GGG + chr7_2:50434623-50434642 Msa1061270:CDS 40.0%
AATCTCGCAATGGTTCCTAA+AGG - chr7_2:50434688-50434707 None:intergenic 40.0%
TTTAGGAACCATTGCGAGAT+TGG + chr7_2:50434687-50434706 Msa1061270:CDS 40.0%
TTTCTCTACCAATCTCGCAA+TGG - chr7_2:50434698-50434717 None:intergenic 40.0%
AACATAGGGCAAGTTACAGT+CGG + chr7_2:50434724-50434743 Msa1061270:CDS 40.0%
!! TTATCGAAGTGTTGCAGATC+TGG + chr7_2:50434762-50434781 Msa1061270:CDS 40.0%
TGATGTGATCATCTCACGAT+AGG - chr7_2:50434929-50434948 None:intergenic 40.0%
AGTGTAAAAGAACGACCACA+TGG - chr7_2:50434976-50434995 None:intergenic 40.0%
GGGAGAGGTTTAAGGAAAAT+TGG - chr7_2:50435000-50435019 None:intergenic 40.0%
CACCATTAACAAATCCTTGG+GGG - chr7_2:50435020-50435039 None:intergenic 40.0%
TTTAGTCTGTTCACGGAGTT+TGG + chr7_2:50435102-50435121 Msa1061270:CDS 40.0%
! CCACTTCTTTTACCGAACTA+GGG - chr7_2:50435137-50435156 None:intergenic 40.0%
! ACCACTTCTTTTACCGAACT+AGG - chr7_2:50435138-50435157 None:intergenic 40.0%
CAAATCTGTCAAGGTTGTCT+TGG - chr7_2:50435310-50435329 None:intergenic 40.0%
TTCCTTTGGGTGGAATTGTA+CGG + chr7_2:50435502-50435521 Msa1061270:CDS 40.0%
GGTGGAATTGTACGGATATT+TGG + chr7_2:50435510-50435529 Msa1061270:CDS 40.0%
GGAATTGTACGGATATTTGG+TGG + chr7_2:50435513-50435532 Msa1061270:CDS 40.0%
! ATTTGGTGGGAATTGTTCCT+TGG + chr7_2:50435527-50435546 Msa1061270:CDS 40.0%
TTTGGTGGGAATTGTTCCTT+GGG + chr7_2:50435528-50435547 Msa1061270:CDS 40.0%
TGAACACCAGGATCAAGAAT+TGG - chr7_2:50435684-50435703 None:intergenic 40.0%
TCACCAGGAATCATCACATT+AGG - chr7_2:50435822-50435841 None:intergenic 40.0%
AATGTGATGATTCCTGGTGA+TGG + chr7_2:50435822-50435841 Msa1061270:CDS 40.0%
CAAAGCTGAAATAGGAGTCA+AGG - chr7_2:50435901-50435920 None:intergenic 40.0%
CTTGACTCCTATTTCAGCTT+TGG + chr7_2:50435899-50435918 Msa1061270:CDS 40.0%
AGTTATCACAATCGGCATCA+AGG + chr7_2:50435968-50435987 Msa1061270:CDS 40.0%
TCAAACTAGTCCACCGAAAT+TGG - chr7_2:50436068-50436087 None:intergenic 40.0%
GCAGTGTCTTAGCATATTGA+AGG + chr7_2:50436120-50436139 Msa1061270:intron 40.0%
! GTGAGCCAAACCATTTGTTA+AGG - chr7_2:50436167-50436186 None:intergenic 40.0%
TCTTGGAGGAAAGTTGACAA+TGG + chr7_2:50436250-50436269 Msa1061270:three_prime_UTR 40.0%
AGGAAAGTTGACAATGGACA+AGG + chr7_2:50436256-50436275 Msa1061270:three_prime_UTR 40.0%
GACAAGGAGACAATAATGCT+AGG + chr7_2:50436272-50436291 Msa1061270:three_prime_UTR 40.0%
! GCACATGTGAAGTACTTCGT+TGG - chr7_2:50434889-50434908 None:intergenic 45.0%
TTAACAAATCCTTGGGGGAG+AGG - chr7_2:50435015-50435034 None:intergenic 45.0%
!! CTCCCCCAAGGATTTGTTAA+TGG + chr7_2:50435015-50435034 Msa1061270:CDS 45.0%
CCCTAGTTCGGTAAAAGAAG+TGG + chr7_2:50435134-50435153 Msa1061270:CDS 45.0%
AACCATCCCTCGAGAAATCA+AGG + chr7_2:50435343-50435362 Msa1061270:CDS 45.0%
AACCTTGATTTCTCGAGGGA+TGG - chr7_2:50435348-50435367 None:intergenic 45.0%
ATCCGTACAATTCCACCCAA+AGG - chr7_2:50435507-50435526 None:intergenic 45.0%
!! TGTTCCTTGGGAAGCATCAA+TGG + chr7_2:50435540-50435559 Msa1061270:CDS 45.0%
CAAACCATTGATGCTTCCCA+AGG - chr7_2:50435547-50435566 None:intergenic 45.0%
CATCATTGGATGCGAAGAAC+AGG + chr7_2:50435607-50435626 Msa1061270:CDS 45.0%
TTTAACTGTGGGGCAATGCA+AGG - chr7_2:50435642-50435661 None:intergenic 45.0%
!! TCCTGGTGATGGTTATGTCA+AGG + chr7_2:50435833-50435852 Msa1061270:CDS 45.0%
!! CCTGGTGATGGTTATGTCAA+GGG + chr7_2:50435834-50435853 Msa1061270:CDS 45.0%
TATCACAATCGGCATCAAGG+AGG + chr7_2:50435971-50435990 Msa1061270:CDS 45.0%
! GCACATGTGAAGTACTTCGT+TGG - chr7_2:50434889-50434908 None:intergenic 45.0%
TTAACAAATCCTTGGGGGAG+AGG - chr7_2:50435015-50435034 None:intergenic 45.0%
!! CTCCCCCAAGGATTTGTTAA+TGG + chr7_2:50435015-50435034 Msa1061270:CDS 45.0%
CCCTAGTTCGGTAAAAGAAG+TGG + chr7_2:50435134-50435153 Msa1061270:CDS 45.0%
AACCATCCCTCGAGAAATCA+AGG + chr7_2:50435343-50435362 Msa1061270:CDS 45.0%
AACCTTGATTTCTCGAGGGA+TGG - chr7_2:50435348-50435367 None:intergenic 45.0%
ATCCGTACAATTCCACCCAA+AGG - chr7_2:50435507-50435526 None:intergenic 45.0%
!! TGTTCCTTGGGAAGCATCAA+TGG + chr7_2:50435540-50435559 Msa1061270:CDS 45.0%
CAAACCATTGATGCTTCCCA+AGG - chr7_2:50435547-50435566 None:intergenic 45.0%
CATCATTGGATGCGAAGAAC+AGG + chr7_2:50435607-50435626 Msa1061270:CDS 45.0%
TTTAACTGTGGGGCAATGCA+AGG - chr7_2:50435642-50435661 None:intergenic 45.0%
!! TCCTGGTGATGGTTATGTCA+AGG + chr7_2:50435833-50435852 Msa1061270:CDS 45.0%
!! CCTGGTGATGGTTATGTCAA+GGG + chr7_2:50435834-50435853 Msa1061270:CDS 45.0%
TATCACAATCGGCATCAAGG+AGG + chr7_2:50435971-50435990 Msa1061270:CDS 45.0%
!! AATAGAATATTATTATATTA+GGG + chr7_2:50435776-50435795 Msa1061270:CDS 5.0%
!! AATAGAATATTATTATATTA+GGG + chr7_2:50435776-50435795 Msa1061270:CDS 5.0%
! CTTGTTTGCTGAAGCAGGGA+AGG + chr7_2:50434627-50434646 Msa1061270:CDS 50.0%
! ATAGGCGCGACGTCTAGAAT+CGG - chr7_2:50434911-50434930 None:intergenic 50.0%
TTCCTTAAACCTCTCCCCCA+AGG + chr7_2:50435003-50435022 Msa1061270:CDS 50.0%
ATCCTTGGGGGAGAGGTTTA+AGG - chr7_2:50435008-50435027 None:intergenic 50.0%
CCCTTGACATAACCATCACC+AGG - chr7_2:50435837-50435856 None:intergenic 50.0%
! CTTGTTTGCTGAAGCAGGGA+AGG + chr7_2:50434627-50434646 Msa1061270:CDS 50.0%
! ATAGGCGCGACGTCTAGAAT+CGG - chr7_2:50434911-50434930 None:intergenic 50.0%
TTCCTTAAACCTCTCCCCCA+AGG + chr7_2:50435003-50435022 Msa1061270:CDS 50.0%
ATCCTTGGGGGAGAGGTTTA+AGG - chr7_2:50435008-50435027 None:intergenic 50.0%
CCCTTGACATAACCATCACC+AGG - chr7_2:50435837-50435856 None:intergenic 50.0%
CGCGTGGGGCATGCCAATTT+CGG + chr7_2:50436052-50436071 Msa1061270:intron 60.0%
GTGGGGCATGCCAATTTCGG+TGG + chr7_2:50436055-50436074 Msa1061270:intron 60.0%
CGCGTGGGGCATGCCAATTT+CGG + chr7_2:50436052-50436071 Msa1061270:intron 60.0%
GTGGGGCATGCCAATTTCGG+TGG + chr7_2:50436055-50436074 Msa1061270:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 50434458 50436369 50434458 ID=Msa1061270;Name=Msa1061270
chr7_2 mRNA 50434458 50436369 50434458 ID=Msa1061270-mRNA-1;Parent=Msa1061270;Name=Msa1061270-mRNA-1;_AED=0.03;_eAED=0.03;_QI=92|1|1|1|1|1|3|153|479
chr7_2 exon 50434458 50435179 50434458 ID=Msa1061270-mRNA-1:exon:9116;Parent=Msa1061270-mRNA-1
chr7_2 exon 50435276 50435992 50435276 ID=Msa1061270-mRNA-1:exon:9117;Parent=Msa1061270-mRNA-1
chr7_2 exon 50436124 50436369 50436124 ID=Msa1061270-mRNA-1:exon:9118;Parent=Msa1061270-mRNA-1
chr7_2 five_prime_UTR 50434458 50434549 50434458 ID=Msa1061270-mRNA-1:five_prime_utr;Parent=Msa1061270-mRNA-1
chr7_2 CDS 50434550 50435179 50434550 ID=Msa1061270-mRNA-1:cds;Parent=Msa1061270-mRNA-1
chr7_2 CDS 50435276 50435992 50435276 ID=Msa1061270-mRNA-1:cds;Parent=Msa1061270-mRNA-1
chr7_2 CDS 50436124 50436216 50436124 ID=Msa1061270-mRNA-1:cds;Parent=Msa1061270-mRNA-1
chr7_2 three_prime_UTR 50436217 50436369 50436217 ID=Msa1061270-mRNA-1:three_prime_utr;Parent=Msa1061270-mRNA-1
Gene Sequence

>Msa1061270

ATGGCTGCTACTACTTCTACTCAAGCAGAGGAGCATGTGTCCTTGAAACTTCTTTTGAACGAAAATGGTAACAAAGTCTTGTTTGCTGAAGCAGGGAAGGACTTTGTCGATATTCTCTGTAGCTTCTTAACAATGCCTTTAGGAACCATTGCGAGATTGGTAGAGAAAGAATCTAACATAGGGCAAGTTACAGTCGGCTGTCTGAACTCTCTTTATCGAAGTGTTGCAGATCTGGAAGAATGTTGTTTCTCTACTGAGATAATCAAGCAAATGCTGCTAATCAACTCATCGGAAGATTATTGTAACGCTCTTAAAATCAACATTGACGACAATCAACCAACGAAGTACTTCACATGTGCCGATTCTAGACGTCGCGCCTATCGTGAGATGATCACATCAACAGATAAAGATAAACATAAATGTCCATGTGGTCGTTCTTTTACACTTCCAATTTTCCTTAAACCTCTCCCCCAAGGATTTGTTAATGGTGTAGCTACTTTTGTCATAACTGATGATCTCACTATCAAGCCAAACTGTATTGACTATACAAGCTTTAGTCTGTTCACGGAGTTTGGCATAAAAAACCCTAGTTCGGTAAAAGAAGTGGTTCTGAATGTCACCAAAGAAAAGGTACTTGATTTGCTAAAGTGTTCTTTGCTTTCCAAGACAACCTTGACAGATTTGTTTTTAGGGAAGAAACCATCCCTCGAGAAATCAAGGTTTATCTTGTGTGATGTTGAAATTAGTGGTAATATCCAAATCAATCTAAAGCTAGTTATAAGAAAATCAGATAACAAGGTATTGTATGCTCAAGGGCAGCAAGATTTTGCAAACTTACTTTTAAGTTTTCTTACATTTCCTTTGGGTGGAATTGTACGGATATTTGGTGGGAATTGTTCCTTGGGAAGCATCAATGGTTTGTACAACAGTATAGTTGATTTGGATGAAAACCAATATTTGACATCATTGGATGCGAAGAACAGGCTTGTTGATCCTTGCATTGCCCCACAGTTAAAGTTAAGCAAGCAGATATTACCAATTCTTGATCCTGGTGTTCATGTATATTATGGTGATTTTAAAAGTTCTGCTAACAGTAATAATATTATTCATTTTCAAATTATCAAATCTGGAATAGAATATTATTATATTAGGGATTTGGAGAAACTGTATTTACCTAATGTGATGATTCCTGGTGATGGTTATGTCAAGGGTCCAGCTATGTATTTTGCTACAGATGATTTGGTTGTAGAACCCTTGACTCCTATTTCAGCTTTGGGTTTACTTACCCGATTGAAAACTCCTCTTAATGATTTGAAGGAAAAAGTTATCACAATCGGCATCAAGGAGTGTCTTAGCATATTGAAGGCTTCTTTGACATCAACATCTGCCTTAACAAATGGTTTGGCTCACATGTTAACTGAAGTTAAGGAGGAGAAATGA
Protein sequence

>Msa1061270

MAATTSTQAEEHVSLKLLLNENGNKVLFAEAGKDFVDILCSFLTMPLGTIARLVEKESNIGQVTVGCLNSLYRSVADLEECCFSTEIIKQMLLINSSEDYCNALKINIDDNQPTKYFTCADSRRRAYREMITSTDKDKHKCPCGRSFTLPIFLKPLPQGFVNGVATFVITDDLTIKPNCIDYTSFSLFTEFGIKNPSSVKEVVLNVTKEKVLDLLKCSLLSKTTLTDLFLGKKPSLEKSRFILCDVEISGNIQINLKLVIRKSDNKVLYAQGQQDFANLLLSFLTFPLGGIVRIFGGNCSLGSINGLYNSIVDLDENQYLTSLDAKNRLVDPCIAPQLKLSKQILPILDPGVHVYYGDFKSSANSNNIIHFQIIKSGIEYYYIRDLEKLYLPNVMIPGDGYVKGPAMYFATDDLVVEPLTPISALGLLTRLKTPLNDLKEKVITIGIKECLSILKASLTSTSALTNGLAHMLTEVKEEK*