Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101750 | XP_003589266.1 | 98.490 | 596 | 9 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101750 | sp|Q8S2E6|Y1235_ORYSJ | 26.913 | 379 | 222 | 11 | 12 | 350 | 17 | 380 | 4.96e-28 | 119 |
| Msa0101750 | sp|Q8S2E6|Y1235_ORYSJ | 37.607 | 117 | 66 | 2 | 463 | 576 | 265 | 377 | 4.82e-15 | 80.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101750 | G7I4K0 | 98.490 | 596 | 9 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1228 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0101750 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0101750 | Msa0336290 | 0.810382 | 1.184916e-50 | -8.615850e-47 |
| Msa0101750 | Msa0411390 | 0.803600 | 3.226679e-49 | -8.615850e-47 |
| Msa0101750 | Msa0530560 | 0.832259 | 1.046729e-55 | -8.615850e-47 |
| Msa0101750 | Msa0534230 | 0.813974 | 1.950824e-51 | -8.615850e-47 |
| Msa0101750 | Msa0578920 | 0.807726 | 4.390266e-50 | -8.615850e-47 |
| Msa0101750 | Msa0610880 | 0.808855 | 2.523050e-50 | -8.615850e-47 |
| Msa0101750 | Msa0692040 | -0.804736 | 1.871769e-49 | -8.615850e-47 |
| Msa0101750 | Msa0765910 | 0.841164 | 5.608054e-58 | -8.615850e-47 |
| Msa0101750 | Msa0832340 | 0.802758 | 4.820255e-49 | -8.615850e-47 |
| Msa0101750 | Msa1061270 | 0.805897 | 1.069187e-49 | -8.615850e-47 |
| Msa0101750 | Msa1189070 | 0.808077 | 3.696486e-50 | -8.615850e-47 |
| Msa0101750 | Msa1226990 | 0.822085 | 2.859860e-53 | -8.615850e-47 |
| Msa0101750 | Msa1243490 | 0.812334 | 4.466273e-51 | -8.615850e-47 |
| Msa0101750 | Msa1360360 | 0.905346 | 4.732808e-80 | -8.615850e-47 |
| Msa0101750 | Msa1390670 | 0.810534 | 1.099141e-50 | -8.615850e-47 |
| Msa0101750 | Msa1392880 | 0.810347 | 1.205863e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101750 | MtrunA17_Chr1g0154041 | 98.490 | 596 | 9 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1228 |
| Msa0101750 | MtrunA17_Chr1g0154101 | 77.720 | 386 | 80 | 2 | 209 | 593 | 460 | 840 | 0.0 | 602 |
| Msa0101750 | MtrunA17_Chr1g0154101 | 33.434 | 332 | 173 | 8 | 47 | 362 | 539 | 838 | 7.26e-41 | 159 |
| Msa0101750 | MtrunA17_Chr1g0154101 | 40.196 | 102 | 59 | 2 | 15 | 115 | 183 | 283 | 1.28e-16 | 84.0 |
| Msa0101750 | MtrunA17_Chr1g0154101 | 35.156 | 128 | 71 | 4 | 15 | 130 | 24 | 151 | 4.41e-15 | 79.0 |
| Msa0101750 | MtrunA17_Chr1g0154071 | 48.817 | 338 | 147 | 8 | 29 | 355 | 169 | 491 | 4.05e-87 | 279 |
| Msa0101750 | MtrunA17_Chr1g0154071 | 47.619 | 147 | 76 | 1 | 439 | 584 | 345 | 491 | 1.09e-34 | 137 |
| Msa0101750 | MtrunA17_Chr1g0154071 | 32.353 | 102 | 68 | 1 | 15 | 115 | 27 | 128 | 8.31e-11 | 64.7 |
| Msa0101750 | MtrunA17_Chr1g0154211 | 42.091 | 373 | 183 | 8 | 15 | 361 | 22 | 387 | 1.90e-83 | 266 |
| Msa0101750 | MtrunA17_Chr1g0154211 | 43.353 | 173 | 85 | 2 | 426 | 589 | 227 | 395 | 6.87e-38 | 144 |
| Msa0101750 | MtrunA17_Chr1g0154131 | 44.545 | 330 | 129 | 9 | 27 | 353 | 194 | 472 | 1.56e-76 | 251 |
| Msa0101750 | MtrunA17_Chr1g0154131 | 40.994 | 161 | 88 | 1 | 422 | 582 | 319 | 472 | 2.45e-33 | 133 |
| Msa0101750 | MtrunA17_Chr1g0154131 | 36.634 | 101 | 63 | 1 | 16 | 115 | 26 | 126 | 8.31e-15 | 77.4 |
| Msa0101750 | MtrunA17_Chr1g0154111 | 41.899 | 358 | 178 | 9 | 17 | 359 | 26 | 368 | 2.74e-72 | 243 |
| Msa0101750 | MtrunA17_Chr1g0154111 | 45.679 | 162 | 82 | 3 | 426 | 587 | 212 | 367 | 5.36e-35 | 139 |
| Msa0101750 | MtrunA17_Chr1g0154191 | 40.361 | 332 | 155 | 7 | 293 | 596 | 56 | 372 | 7.78e-64 | 214 |
| Msa0101750 | MtrunA17_Chr1g0154191 | 36.538 | 364 | 191 | 10 | 17 | 360 | 22 | 365 | 1.38e-60 | 206 |
| Msa0101750 | MtrunA17_Chr1g0154161 | 39.884 | 346 | 160 | 11 | 252 | 596 | 27 | 325 | 1.40e-62 | 209 |
| Msa0101750 | MtrunA17_Chr1g0154161 | 36.207 | 348 | 162 | 8 | 15 | 360 | 29 | 318 | 7.05e-54 | 186 |
| Msa0101750 | MtrunA17_Chr1g0154171 | 39.444 | 360 | 183 | 11 | 252 | 595 | 20 | 360 | 3.46e-61 | 207 |
| Msa0101750 | MtrunA17_Chr1g0154171 | 36.134 | 357 | 193 | 9 | 15 | 360 | 22 | 354 | 1.39e-56 | 194 |
| Msa0101750 | MtrunA17_Chr1g0154151 | 37.464 | 347 | 174 | 9 | 31 | 367 | 20 | 333 | 2.42e-58 | 198 |
| Msa0101750 | MtrunA17_Chr1g0154151 | 37.888 | 322 | 175 | 7 | 272 | 587 | 20 | 322 | 4.78e-50 | 176 |
| Msa0101750 | MtrunA17_Chr1g0154121 | 66.279 | 86 | 27 | 1 | 278 | 361 | 1 | 86 | 8.69e-31 | 115 |
| Msa0101750 | MtrunA17_Chr1g0154121 | 46.000 | 100 | 43 | 2 | 508 | 596 | 2 | 101 | 1.58e-21 | 89.7 |
| Msa0101750 | MtrunA17_Chr6g0464121 | 69.333 | 75 | 22 | 1 | 274 | 347 | 113 | 187 | 1.41e-27 | 114 |
| Msa0101750 | MtrunA17_Chr7g0233561 | 27.679 | 336 | 186 | 11 | 11 | 338 | 13 | 299 | 5.22e-25 | 106 |
| Msa0101750 | MtrunA17_Chr1g0163071 | 25.868 | 317 | 200 | 6 | 31 | 347 | 2 | 283 | 5.12e-24 | 102 |
| Msa0101750 | MtrunA17_Chr8g0390841 | 22.438 | 566 | 321 | 20 | 28 | 576 | 52 | 516 | 3.71e-22 | 100 |
| Msa0101750 | MtrunA17_Chr7g0233521 | 25.080 | 311 | 168 | 8 | 31 | 338 | 2 | 250 | 5.22e-19 | 87.8 |
| Msa0101750 | MtrunA17_Chr4g0033961 | 23.250 | 400 | 236 | 11 | 14 | 353 | 4 | 392 | 6.52e-19 | 89.7 |
| Msa0101750 | MtrunA17_Chr1g0154251 | 24.468 | 376 | 222 | 14 | 15 | 336 | 26 | 393 | 2.46e-15 | 79.0 |
| Msa0101750 | MtrunA17_Chr1g0162441 | 28.188 | 149 | 106 | 1 | 13 | 160 | 4 | 152 | 1.18e-14 | 76.6 |
| Msa0101750 | MtrunA17_Chr1g0154241 | 34.314 | 102 | 66 | 1 | 15 | 115 | 21 | 122 | 1.94e-14 | 73.9 |
| Msa0101750 | MtrunA17_Chr1g0162411 | 35.870 | 92 | 58 | 1 | 14 | 104 | 5 | 96 | 2.20e-12 | 69.3 |
| Msa0101750 | MtrunA17_Chr7g0233571 | 34.021 | 97 | 63 | 1 | 15 | 110 | 9 | 105 | 1.23e-11 | 64.7 |
| Msa0101750 | MtrunA17_Chr3g0103151 | 29.457 | 129 | 85 | 4 | 15 | 143 | 11 | 133 | 5.75e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101750 | AT3G18990.2 | 25.405 | 370 | 229 | 13 | 13 | 361 | 3 | 346 | 1.91e-23 | 102 |
| Msa0101750 | AT3G18990.1 | 25.562 | 356 | 218 | 13 | 13 | 347 | 3 | 332 | 4.71e-23 | 101 |
| Msa0101750 | AT4G33280.3 | 23.932 | 351 | 227 | 13 | 15 | 336 | 24 | 363 | 7.14e-14 | 74.3 |
| Msa0101750 | AT5G66980.1 | 21.777 | 349 | 215 | 12 | 15 | 348 | 9 | 314 | 1.18e-13 | 72.8 |
| Msa0101750 | AT3G06220.1 | 26.712 | 146 | 98 | 2 | 14 | 158 | 8 | 145 | 2.65e-13 | 68.9 |
| Msa0101750 | AT5G42700.2 | 32.110 | 109 | 69 | 1 | 475 | 583 | 76 | 179 | 3.92e-12 | 65.9 |
| Msa0101750 | AT5G42700.2 | 30.556 | 144 | 89 | 3 | 216 | 354 | 42 | 179 | 5.02e-12 | 65.5 |
| Msa0101750 | AT3G06160.5 | 26.733 | 101 | 74 | 0 | 14 | 114 | 8 | 108 | 5.42e-12 | 67.8 |
| Msa0101750 | AT3G06160.4 | 26.733 | 101 | 74 | 0 | 14 | 114 | 8 | 108 | 5.42e-12 | 67.8 |
| Msa0101750 | AT3G06160.3 | 26.733 | 101 | 74 | 0 | 14 | 114 | 8 | 108 | 5.42e-12 | 67.8 |
| Msa0101750 | AT3G06160.2 | 26.733 | 101 | 74 | 0 | 14 | 114 | 67 | 167 | 5.68e-12 | 68.2 |
| Msa0101750 | AT3G06160.1 | 26.733 | 101 | 74 | 0 | 14 | 114 | 23 | 123 | 5.72e-12 | 67.8 |
| Msa0101750 | AT5G42700.1 | 32.075 | 106 | 67 | 1 | 475 | 580 | 121 | 221 | 7.42e-12 | 65.9 |
| Msa0101750 | AT5G42700.1 | 30.556 | 144 | 89 | 3 | 216 | 354 | 87 | 224 | 1.08e-11 | 65.5 |
Find 139 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGATAATGACATCAATTT+TGG | 0.121301 | 1_3:-8399537 | Msa0101750:CDS |
| CAATGTTTGATTATTGATTT+TGG | 0.135050 | 1_3:-8403561 | Msa0101750:five_prime_UTR |
| TGCTGAGGTGATTTCTTCTT+TGG | 0.181730 | 1_3:-8402132 | Msa0101750:CDS |
| CATTTCACCGTGCAAGTATT+TGG | 0.220691 | 1_3:-8402245 | Msa0101750:CDS |
| GAGCTAACTTTAGGTTTCTT+TGG | 0.250603 | 1_3:+8400412 | None:intergenic |
| GTTTGAATTCGATTGATTAA+TGG | 0.251858 | 1_3:-8403480 | Msa0101750:intron |
| GCATATATCTGGAAGTATTA+TGG | 0.252813 | 1_3:+8400434 | None:intergenic |
| TTAGCGATGATACAACTAAT+TGG | 0.263378 | 1_3:+8399255 | None:intergenic |
| ATCTACTAAGCCACTGCTTT+TGG | 0.270341 | 1_3:-8399208 | Msa0101750:three_prime_UTR |
| GAAGGTCTTGACCATCAAAT+TGG | 0.285624 | 1_3:-8399447 | Msa0101750:CDS |
| TGCGGATTAGTTTCATTAAC+TGG | 0.291460 | 1_3:-8402407 | Msa0101750:CDS |
| ATTGTTCTGCCTTTGGCATC+TGG | 0.293818 | 1_3:+8399594 | None:intergenic |
| AGGTTTCTTTGGCATATATC+TGG | 0.305794 | 1_3:+8400423 | None:intergenic |
| CTGCACTTTGAGCTAACTTT+AGG | 0.312808 | 1_3:+8400403 | None:intergenic |
| TTTGAATTCGATTGATTAAT+GGG | 0.316339 | 1_3:-8403479 | Msa0101750:intron |
| TGGTCTAACCAACTCATAAT+TGG | 0.316491 | 1_3:+8402022 | None:intergenic |
| ATAATCTTTGTCTTGCAGTT+TGG | 0.320704 | 1_3:+8400715 | None:intergenic |
| GTTTCACGTGCCCAATTTGA+TGG | 0.328477 | 1_3:+8399436 | None:intergenic |
| TGTGCAGCAGAGAACTGATA+TGG | 0.328537 | 1_3:+8399687 | None:intergenic |
| ACTAGCTGAACATTCTTTGC+AGG | 0.330880 | 1_3:+8401971 | None:intergenic |
| CTTCCTTCCCACTTCTATAC+AGG | 0.338352 | 1_3:+8401717 | None:intergenic |
| TGTGACATCGAAAATTGATA+TGG | 0.348004 | 1_3:+8400742 | None:intergenic |
| TTTACAATATGGCGACCTTT+TGG | 0.367843 | 1_3:-8402291 | Msa0101750:CDS |
| GGAGATCATCATTTACAATA+TGG | 0.369169 | 1_3:-8402302 | Msa0101750:CDS |
| ATTTCTTCTTTGGATGTTGT+TGG | 0.376542 | 1_3:-8402122 | Msa0101750:CDS |
| TTCTCAAACCAGCTTTAGCC+TGG | 0.378926 | 1_3:+8399916 | None:intergenic |
| GTTTCTCTGATCATACTGAT+TGG | 0.381923 | 1_3:+8402002 | None:intergenic |
| TTGAATTCAATGGCTAAAAC+AGG | 0.382436 | 1_3:+8400331 | None:intergenic |
| GAGCCTGAGTTGGCTATTGC+TGG | 0.383202 | 1_3:-8402056 | Msa0101750:CDS |
| GTGATGCAGGTTCATATATC+CGG | 0.383257 | 1_3:-8399480 | Msa0101750:CDS |
| ACCGGATTTCTTGAATTCAA+TGG | 0.386457 | 1_3:+8400321 | None:intergenic |
| CAAGAACATTAGCAAGTAGA+TGG | 0.398461 | 1_3:+8399387 | None:intergenic |
| ATTAATGGGTCGTGAGTGTA+AGG | 0.408425 | 1_3:-8403465 | Msa0101750:exon |
| GAAAAGAGGACGTAAATGAT+TGG | 0.410999 | 1_3:+8401627 | None:intergenic |
| GCCATTGAATTCAAGAAATC+CGG | 0.411437 | 1_3:-8400322 | Msa0101750:CDS |
| TTAAACTTCAATAATATTGA+AGG | 0.413589 | 1_3:-8402167 | Msa0101750:CDS |
| CTTGTATGCACTCTAGTTGT+TGG | 0.420097 | 1_3:+8400649 | None:intergenic |
| TCATCAATATGATATGATAA+TGG | 0.426978 | 1_3:+8403849 | None:intergenic |
| ATGTCGTGCCCTCCATTTGA+TGG | 0.432582 | 1_3:+8402429 | None:intergenic |
| GATTATTCTTTATAATTTGA+AGG | 0.433632 | 1_3:-8400698 | Msa0101750:CDS |
| AAATTGGTTTCGTTAAGAAA+TGG | 0.440445 | 1_3:-8403903 | None:intergenic |
| TTACTATTTCCTGTTTGAAA+AGG | 0.440868 | 1_3:+8401936 | None:intergenic |
| ACAGATCAATCAATCTCAAA+TGG | 0.450374 | 1_3:-8399356 | Msa0101750:three_prime_UTR |
| CGTGTTCGCATTGCTGAGGT+TGG | 0.454549 | 1_3:-8400529 | Msa0101750:CDS |
| TTCTTCAACCTCTCAATCTC+TGG | 0.460887 | 1_3:-8403396 | Msa0101750:intron |
| TTTAACAAAATATGGAAAAG+AGG | 0.462248 | 1_3:+8401613 | None:intergenic |
| CTAGATCGCTGACCAAGTTA+AGG | 0.465446 | 1_3:-8399028 | Msa0101750:three_prime_UTR |
| CGAAGTAGTTGAAGCTCTAC+CGG | 0.467583 | 1_3:+8400303 | None:intergenic |
| TAGCGATGATACAACTAATT+GGG | 0.467856 | 1_3:+8399256 | None:intergenic |
| TCATGGATGGTCAACATTTG+TGG | 0.468855 | 1_3:-8402324 | Msa0101750:CDS |
| GGTGTGAATTGTTCTGCCTT+TGG | 0.469200 | 1_3:+8399587 | None:intergenic |
| CTGGTCCTAGTGGAAATACT+TGG | 0.471402 | 1_3:-8402388 | Msa0101750:CDS |
| CACTCTATGTGGAGGATGGA+TGG | 0.472108 | 1_3:-8400623 | Msa0101750:CDS |
| TTCAACTACTTCGAAGAAGA+TGG | 0.472680 | 1_3:-8400293 | Msa0101750:CDS |
| AGAGATTGAGAGGTTGAAGA+AGG | 0.474879 | 1_3:+8403398 | None:intergenic |
| TGATACAACTAATTGGGATC+TGG | 0.476883 | 1_3:+8399262 | None:intergenic |
| CTAAGTTCCCAGGCTAAAGC+TGG | 0.489551 | 1_3:-8399924 | Msa0101750:CDS |
| AAAAGAGGACGTAAATGATT+GGG | 0.490021 | 1_3:+8401628 | None:intergenic |
| ATTTGATGGACAAAACCATC+TGG | 0.494945 | 1_3:+8402443 | None:intergenic |
| AAGGTCTTGACCATCAAATT+GGG | 0.499167 | 1_3:-8399446 | Msa0101750:CDS |
| ATACGAACCACTGACATTGA+AGG | 0.499194 | 1_3:+8401580 | None:intergenic |
| AATCATCTGTTCTTCCATCA+TGG | 0.499739 | 1_3:-8402341 | Msa0101750:CDS |
| GCAAGTTCGATTAGTTGAGC+AGG | 0.500057 | 1_3:-8402366 | Msa0101750:CDS |
| TGATGCAGGTTCATATATCC+GGG | 0.500346 | 1_3:-8399479 | Msa0101750:CDS |
| ATTATTCTTTATAATTTGAA+GGG | 0.502841 | 1_3:-8400697 | Msa0101750:CDS |
| AGGTTGAAGAAGGGTTAAAG+AGG | 0.505560 | 1_3:+8403408 | None:intergenic |
| CGTATCTCATTATGTGATGC+AGG | 0.510845 | 1_3:-8399493 | Msa0101750:CDS |
| GTGCGACGCCATCGAGAACC+AGG | 0.511386 | 1_3:-8402078 | Msa0101750:CDS |
| GGAAATAGTAATGAAGTTGA+AGG | 0.516580 | 1_3:-8401924 | Msa0101750:intron |
| AGAAATTACCAGAGATTGAG+AGG | 0.520071 | 1_3:+8403388 | None:intergenic |
| CATGGATGGTCAACATTTGT+GGG | 0.520091 | 1_3:-8402323 | Msa0101750:CDS |
| TCAGTAGGCTCGTGAAATGT+TGG | 0.521161 | 1_3:-8399149 | Msa0101750:three_prime_UTR |
| AGGCTCGTGAAATGTTGGTC+TGG | 0.524564 | 1_3:-8399144 | Msa0101750:three_prime_UTR |
| CAGGTGTTGCGCTGAGGCAA+AGG | 0.527024 | 1_3:-8403626 | Msa0101750:five_prime_UTR |
| TCATATATCCGGGGTTGGAA+AGG | 0.529986 | 1_3:-8399469 | Msa0101750:CDS |
| TCTTCAACACGATGTTTCCT+CGG | 0.530379 | 1_3:+8399951 | None:intergenic |
| CAATAGCCAACTCAGGCTCC+TGG | 0.530813 | 1_3:+8402060 | None:intergenic |
| AAATCTATCCAATTATGAGT+TGG | 0.532358 | 1_3:-8402030 | Msa0101750:CDS |
| TCAACTACTTCGAAGAAGAT+GGG | 0.533657 | 1_3:-8400292 | Msa0101750:CDS |
| TTAAAGAGGTGATAGAAGTG+AGG | 0.536876 | 1_3:+8403422 | None:intergenic |
| GCAATTCAAGAGGCCAGTGT+TGG | 0.538663 | 1_3:-8399632 | Msa0101750:CDS |
| CGTGGCAATAGCATAAAAGT+TGG | 0.540845 | 1_3:-8400592 | Msa0101750:CDS |
| GAATATGATCAACCTTAACT+TGG | 0.542669 | 1_3:+8399016 | None:intergenic |
| CTCAGGCTCCTGGTTCTCGA+TGG | 0.547387 | 1_3:+8402070 | None:intergenic |
| GTGAAATGTTGGTCTGGTAG+AGG | 0.547760 | 1_3:-8399138 | Msa0101750:three_prime_UTR |
| GCAGTAGTATATAAATTTCG+AGG | 0.547864 | 1_3:-8403595 | Msa0101750:five_prime_UTR |
| ACACGGAGGGACAGTGTTGT+CGG | 0.553639 | 1_3:+8403793 | None:intergenic |
| CAAATGTTGACCATCCATGA+TGG | 0.553915 | 1_3:+8402327 | None:intergenic |
| CAGGTTCATATATCCGGGGT+TGG | 0.554905 | 1_3:-8399474 | Msa0101750:CDS |
| CCTCGTATCTGAAAACCAAA+AGG | 0.559251 | 1_3:+8402276 | None:intergenic |
| TTCCTGTTTGAAAAGGAACA+TGG | 0.559808 | 1_3:+8401943 | None:intergenic |
| ATATCCGGGGTTGGAAAGGA+AGG | 0.561335 | 1_3:-8399465 | Msa0101750:CDS |
| ATCTGTTCTTCCATCATGGA+TGG | 0.561421 | 1_3:-8402337 | Msa0101750:CDS |
| TTACCAGCAATAGCCAACTC+AGG | 0.564889 | 1_3:+8402053 | None:intergenic |
| ATAATTTGAAGGGAGAACAC+TGG | 0.567172 | 1_3:-8400687 | Msa0101750:CDS |
| AATGGGTTAGACTGCCAGGT+TGG | 0.568245 | 1_3:-8400502 | Msa0101750:CDS |
| CAAATGGAGGGCACGACATG+CGG | 0.572358 | 1_3:-8402425 | Msa0101750:CDS |
| CGAGAACCAGGAGCCTGAGT+TGG | 0.572650 | 1_3:-8402066 | Msa0101750:CDS |
| GTTACGCTTCGCAATTCAAG+AGG | 0.575759 | 1_3:-8399642 | Msa0101750:CDS |
| GTTTCATTAACTGGTCCTAG+TGG | 0.577634 | 1_3:-8402398 | Msa0101750:CDS |
| ATGAAGAAGTTCAATGTCAG+TGG | 0.577831 | 1_3:-8399822 | Msa0101750:CDS |
| GAGATTGAGAGGTTGAAGAA+GGG | 0.578022 | 1_3:+8403399 | None:intergenic |
| AAGACCTTCCTTTCCAACCC+CGG | 0.580500 | 1_3:+8399461 | None:intergenic |
| TGTCAGTGGTTCGTATACTC+TGG | 0.580584 | 1_3:-8401573 | Msa0101750:intron |
| CATACAAGTCACACTCTATG+TGG | 0.582424 | 1_3:-8400634 | Msa0101750:CDS |
| GCAGCAATCCTGTATAGAAG+TGG | 0.586525 | 1_3:-8401725 | Msa0101750:CDS |
| GTCACACTCTATGTGGAGGA+TGG | 0.589858 | 1_3:-8400627 | Msa0101750:CDS |
| TCTCAAACCAGCTTTAGCCT+GGG | 0.589973 | 1_3:+8399917 | None:intergenic |
| TGAAGATGAACTAAGTTCCC+AGG | 0.590157 | 1_3:-8399934 | Msa0101750:CDS |
| GAGATGTTCCGAAGAAAATG+AGG | 0.590900 | 1_3:-8402100 | Msa0101750:CDS |
| GTGCAGCAGAGAACTGATAT+GGG | 0.592876 | 1_3:+8399688 | None:intergenic |
| GATGTCATTATCACGAACAA+AGG | 0.594099 | 1_3:+8399545 | None:intergenic |
| ATCAAAACCTTCAATGTCAG+TGG | 0.599816 | 1_3:-8401587 | Msa0101750:CDS |
| CTTTGGGTTCAGTAGTTACG+AGG | 0.601823 | 1_3:+8403766 | None:intergenic |
| TGTCAGTGGATCATACACTT+TGG | 0.614461 | 1_3:-8399808 | Msa0101750:intron |
| GATTGTCTATAACATTCAGT+AGG | 0.614697 | 1_3:-8399164 | Msa0101750:three_prime_UTR |
| CAGCAATCCTGTATAGAAGT+GGG | 0.617200 | 1_3:-8401724 | Msa0101750:CDS |
| CAACTACTTCGAAGAAGATG+GGG | 0.619729 | 1_3:-8400291 | Msa0101750:CDS |
| ACTTGCCAAGTATTTCCACT+AGG | 0.637449 | 1_3:+8402383 | None:intergenic |
| ATTACGTGTTCGCATTGCTG+AGG | 0.639477 | 1_3:-8400533 | Msa0101750:CDS |
| AACTCTGTTCCAGATGCCAA+AGG | 0.640736 | 1_3:-8399603 | Msa0101750:CDS |
| ATGATAAGAACCAAAAGCAG+TGG | 0.641516 | 1_3:+8399198 | None:intergenic |
| AATCCTGTATAGAAGTGGGA+AGG | 0.661650 | 1_3:-8401720 | Msa0101750:CDS |
| ATTCTCACCAAATACTTGCA+CGG | 0.664539 | 1_3:+8402238 | None:intergenic |
| AGTAGTTACGAGGAGAAACA+CGG | 0.669808 | 1_3:+8403776 | None:intergenic |
| TAGCTCAAAGTGCAGAACGA+AGG | 0.671058 | 1_3:-8400395 | Msa0101750:CDS |
| ACAAGTCACACTCTATGTGG+AGG | 0.673956 | 1_3:-8400631 | Msa0101750:CDS |
| TTAATGGGTCGTGAGTGTAA+GGG | 0.677928 | 1_3:-8403464 | Msa0101750:CDS |
| CTCGTAACTACTGAACCCAA+AGG | 0.682460 | 1_3:-8403765 | Msa0101750:intron |
| TTTGACCAGGTGTTGCGCTG+AGG | 0.683475 | 1_3:-8403632 | Msa0101750:intron |
| GTTACGAGGAGAAACACGGA+GGG | 0.686153 | 1_3:+8403780 | None:intergenic |
| CAGAGTTTACAATCCAACAC+TGG | 0.686442 | 1_3:+8399619 | None:intergenic |
| TTAATGCAGAGAGTTCCAGA+TGG | 0.692519 | 1_3:-8402458 | Msa0101750:intron |
| AGGACAGAAAAGTGATGCTG+AGG | 0.705655 | 1_3:-8402147 | Msa0101750:CDS |
| AAGCTCCGCTGAGAATATCG+TGG | 0.711691 | 1_3:+8401690 | None:intergenic |
| AAACAAAGACAGCTGTACCG+AGG | 0.720792 | 1_3:-8399968 | Msa0101750:intron |
| GATGCAGGTTCATATATCCG+GGG | 0.727717 | 1_3:-8399478 | Msa0101750:CDS |
| GATGACCACGATATTCTCAG+CGG | 0.779588 | 1_3:-8401695 | Msa0101750:CDS |
| AGTTACGAGGAGAAACACGG+AGG | 0.804934 | 1_3:+8403779 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTGAGATTTTTAAAAAA+TGG | - | chr1_3:8400002-8400021 | Msa0101750:intron | 10.0% |
| !!! | TTGATTATTTTAACAAAATA+TGG | + | chr1_3:8401323-8401342 | None:intergenic | 10.0% |
| !! | ATTATTCTTTATAATTTGAA+GGG | - | chr1_3:8402228-8402247 | Msa0101750:CDS | 10.0% |
| !! | ATTAAAAAATAATTGAAGGA+GGG | + | chr1_3:8399238-8399257 | None:intergenic | 15.0% |
| !! | ACAGATTAAAAAATAATTGA+AGG | + | chr1_3:8399242-8399261 | None:intergenic | 15.0% |
| !!! | TTGATATCATAAAATACTTT+TGG | - | chr1_3:8400419-8400438 | Msa0101750:CDS | 15.0% |
| !! | TTAAACTTCAATAATATTGA+AGG | - | chr1_3:8400758-8400777 | Msa0101750:intron | 15.0% |
| !! | GATAAATTATAAATGACAAA+AGG | + | chr1_3:8401388-8401407 | None:intergenic | 15.0% |
| !! | TAAAATAAGTCAATCAAAAT+GGG | - | chr1_3:8401855-8401874 | Msa0101750:intron | 15.0% |
| !!! | GTTTCTTATTTTATGTTTAA+TGG | - | chr1_3:8402067-8402086 | Msa0101750:CDS | 15.0% |
| !! | GATTATTCTTTATAATTTGA+AGG | - | chr1_3:8402227-8402246 | Msa0101750:CDS | 15.0% |
| !!! | TATTTTTTTTACAATTGCAA+TGG | - | chr1_3:8402827-8402846 | Msa0101750:intron | 15.0% |
| !! | TCATCAATATGATATGATAA+TGG | + | chr1_3:8399079-8399098 | None:intergenic | 20.0% |
| !! | GATTAAAAAATAATTGAAGG+AGG | + | chr1_3:8399239-8399258 | None:intergenic | 20.0% |
| !!! | CAATGTTTGATTATTGATTT+TGG | - | chr1_3:8399364-8399383 | Msa0101750:three_prime_UTR | 20.0% |
| !! | TTTGAATTCGATTGATTAAT+GGG | - | chr1_3:8399446-8399465 | Msa0101750:CDS | 20.0% |
| !! | ATAAATTGAAACATGCAATT+AGG | + | chr1_3:8399577-8399596 | None:intergenic | 20.0% |
| !!! | ATAACTTACAACATATTTTG+TGG | - | chr1_3:8399661-8399680 | Msa0101750:CDS | 20.0% |
| !!! | ACTCTAAAAGAAAATACTTT+TGG | + | chr1_3:8399930-8399949 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTTAGAGTATGTT+TGG | - | chr1_3:8399935-8399954 | Msa0101750:CDS | 20.0% |
| !!! | ATTCCAAATCAATACTTTTT+GGG | + | chr1_3:8400274-8400293 | None:intergenic | 20.0% |
| !!! | AATTCCAAATCAATACTTTT+TGG | + | chr1_3:8400275-8400294 | None:intergenic | 20.0% |
| !! | TTAAATAAAATGATAAGCTC+TGG | + | chr1_3:8401148-8401167 | None:intergenic | 20.0% |
| !! | TTTAACAAAATATGGAAAAG+AGG | + | chr1_3:8401315-8401334 | None:intergenic | 20.0% |
| !! | AAGATAAAACAGCATTATTT+GGG | + | chr1_3:8401412-8401431 | None:intergenic | 20.0% |
| !! | CTAAAATAAGTCAATCAAAA+TGG | - | chr1_3:8401854-8401873 | Msa0101750:intron | 20.0% |
| !!! | ATTTTCACAAAATTAGGAAA+TGG | + | chr1_3:8403082-8403101 | None:intergenic | 20.0% |
| !!! | TTCATGATTTTCACAAAATT+AGG | + | chr1_3:8403088-8403107 | None:intergenic | 20.0% |
| !!! | TTCATTATTTTTGTTTGACC+AGG | - | chr1_3:8399280-8399299 | Msa0101750:three_prime_UTR | 25.0% |
| ! | GAATTTAATAACAAAGAGAC+AGG | - | chr1_3:8399423-8399442 | Msa0101750:CDS | 25.0% |
| ! | GTTTGAATTCGATTGATTAA+TGG | - | chr1_3:8399445-8399464 | Msa0101750:CDS | 25.0% |
| !! | ATTTTGTGGACAAGTAAAAT+TGG | - | chr1_3:8399675-8399694 | Msa0101750:CDS | 25.0% |
| ! | AAGTAAAATTGGAAGCAAAT+GGG | - | chr1_3:8399686-8399705 | Msa0101750:CDS | 25.0% |
| !! | CGATTTTCTTTTCAAAATCA+AGG | + | chr1_3:8400102-8400121 | None:intergenic | 25.0% |
| !!! | AAATCAATACTTTTTGGGAA+AGG | + | chr1_3:8400269-8400288 | None:intergenic | 25.0% |
| !!! | TTTCCCAAAAAGTATTGATT+TGG | - | chr1_3:8400268-8400287 | Msa0101750:CDS | 25.0% |
| !!! | AGTATTGATTTGGAATTGAT+TGG | - | chr1_3:8400278-8400297 | Msa0101750:CDS | 25.0% |
| ! | AAATCTATCCAATTATGAGT+TGG | - | chr1_3:8400895-8400914 | Msa0101750:intron | 25.0% |
| ! | TTACTATTTCCTGTTTGAAA+AGG | + | chr1_3:8400992-8401011 | None:intergenic | 25.0% |
| !! | TAAGCTCTGGTATAAATATA+AGG | + | chr1_3:8401135-8401154 | None:intergenic | 25.0% |
| ! | GAAGATAAAACAGCATTATT+TGG | + | chr1_3:8401413-8401432 | None:intergenic | 25.0% |
| ! | ATTTGTTTGCATAGCTATTT+AGG | + | chr1_3:8401711-8401730 | None:intergenic | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr1_3:8401806-8401825 | None:intergenic | 25.0% |
| !! | AATATAATTTGCCATCTAGT+GGG | + | chr1_3:8402718-8402737 | None:intergenic | 25.0% |
| ! | TAGTGAAAGAAAGAACAAAA+AGG | - | chr1_3:8402861-8402880 | Msa0101750:intron | 25.0% |
| !! | CAATATCATTGCTAAACTTT+TGG | - | chr1_3:8403191-8403210 | Msa0101750:intron | 25.0% |
| !!! | CTCAAATGGAGATTTTTTTT+TGG | - | chr1_3:8403583-8403602 | Msa0101750:five_prime_UTR | 25.0% |
| GCAGTAGTATATAAATTTCG+AGG | - | chr1_3:8399330-8399349 | Msa0101750:three_prime_UTR | 30.0% | |
| CAAGTAAAATTGGAAGCAAA+TGG | - | chr1_3:8399685-8399704 | Msa0101750:CDS | 30.0% | |
| AGTAAAATTGGAAGCAAATG+GGG | - | chr1_3:8399687-8399706 | Msa0101750:CDS | 30.0% | |
| ! | GGTAAGATGTTTATCTTTTG+AGG | - | chr1_3:8399708-8399727 | Msa0101750:intron | 30.0% |
| TCAAAAGCTAAATGTGTGTT+TGG | - | chr1_3:8399732-8399751 | Msa0101750:intron | 30.0% | |
| TAAATGTGTGTTTGGATTGA+CGG | - | chr1_3:8399740-8399759 | Msa0101750:intron | 30.0% | |
| !! | GTTTTGGTAAAACTAGAGTT+TGG | - | chr1_3:8399795-8399814 | Msa0101750:intron | 30.0% |
| !!! | TCTTTTAGAGTATGTTTGGA+TGG | - | chr1_3:8399939-8399958 | Msa0101750:CDS | 30.0% |
| AGAGTGATTGAAATGTTGTA+TGG | + | chr1_3:8400049-8400068 | None:intergenic | 30.0% | |
| ATAGTTTCTCAGCTTCTTAT+AGG | + | chr1_3:8400211-8400230 | None:intergenic | 30.0% | |
| ! | GTTACTCTCTGCATTTTTAA+TGG | + | chr1_3:8400304-8400323 | None:intergenic | 30.0% |
| ATACATGATACTGGAAATTG+AGG | + | chr1_3:8400367-8400386 | None:intergenic | 30.0% | |
| CTTGTTTAGATACATGATAC+TGG | + | chr1_3:8400376-8400395 | None:intergenic | 30.0% | |
| GGAGATCATCATTTACAATA+TGG | - | chr1_3:8400623-8400642 | Msa0101750:CDS | 30.0% | |
| ATTTCTTCTTTGGATGTTGT+TGG | - | chr1_3:8400803-8400822 | Msa0101750:intron | 30.0% | |
| GGAAATAGTAATGAAGTTGA+AGG | - | chr1_3:8401001-8401020 | Msa0101750:intron | 30.0% | |
| TAGCAAATTCGATTTCATTC+TGG | - | chr1_3:8401026-8401045 | Msa0101750:intron | 30.0% | |
| AGCAAATTCGATTTCATTCT+GGG | - | chr1_3:8401027-8401046 | Msa0101750:intron | 30.0% | |
| ! | AGACAAGTATCAGTTTTCTA+GGG | + | chr1_3:8401087-8401106 | None:intergenic | 30.0% |
| ! | TAGACAAGTATCAGTTTTCT+AGG | + | chr1_3:8401088-8401107 | None:intergenic | 30.0% |
| AAAAGAGGACGTAAATGATT+GGG | + | chr1_3:8401300-8401319 | None:intergenic | 30.0% | |
| TAAAGGGAGAAACACTATTT+GGG | + | chr1_3:8401473-8401492 | None:intergenic | 30.0% | |
| ATAAAGGGAGAAACACTATT+TGG | + | chr1_3:8401474-8401493 | None:intergenic | 30.0% | |
| AAATGTCATAGCAGTAGAAA+AGG | + | chr1_3:8401895-8401914 | None:intergenic | 30.0% | |
| TGAATCTAAAAGTTTGAGCA+AGG | + | chr1_3:8402011-8402030 | None:intergenic | 30.0% | |
| ATAAGAAACATGTGAGTAGA+AGG | + | chr1_3:8402056-8402075 | None:intergenic | 30.0% | |
| TGTGACATCGAAAATTGATA+TGG | + | chr1_3:8402186-8402205 | None:intergenic | 30.0% | |
| ATAATCTTTGTCTTGCAGTT+TGG | + | chr1_3:8402213-8402232 | None:intergenic | 30.0% | |
| !! | GCATATATCTGGAAGTATTA+TGG | + | chr1_3:8402494-8402513 | None:intergenic | 30.0% |
| TTGAATTCAATGGCTAAAAC+AGG | + | chr1_3:8402597-8402616 | None:intergenic | 30.0% | |
| AAAAGCTTCCCATAAAAAGA+CGG | - | chr1_3:8402671-8402690 | Msa0101750:intron | 30.0% | |
| ! | CAATATAATTTGCCATCTAG+TGG | + | chr1_3:8402719-8402738 | None:intergenic | 30.0% |
| ! | AAGGTAGAAACTTTTACAGA+AGG | + | chr1_3:8402905-8402924 | None:intergenic | 30.0% |
| GACTGAAGTCATAATTTGAA+AGG | + | chr1_3:8402924-8402943 | None:intergenic | 30.0% | |
| !! | CGTGATAATGACATCAATTT+TGG | - | chr1_3:8403388-8403407 | Msa0101750:intron | 30.0% |
| ACAGATCAATCAATCTCAAA+TGG | - | chr1_3:8403569-8403588 | Msa0101750:five_prime_UTR | 30.0% | |
| TAGCGATGATACAACTAATT+GGG | + | chr1_3:8403672-8403691 | None:intergenic | 30.0% | |
| TTAGCGATGATACAACTAAT+TGG | + | chr1_3:8403673-8403692 | None:intergenic | 30.0% | |
| GATTGTCTATAACATTCAGT+AGG | - | chr1_3:8403761-8403780 | Msa0101750:intron | 30.0% | |
| TTAAAGAGGTGATAGAAGTG+AGG | + | chr1_3:8399506-8399525 | None:intergenic | 35.0% | |
| AGAAATTACCAGAGATTGAG+AGG | + | chr1_3:8399540-8399559 | None:intergenic | 35.0% | |
| TGACTTTGACGAAATTACTG+TGG | - | chr1_3:8399763-8399782 | Msa0101750:intron | 35.0% | |
| GACTTTGACGAAATTACTGT+GGG | - | chr1_3:8399764-8399783 | Msa0101750:intron | 35.0% | |
| ! | TTTAGAGTATGTTTGGATGG+AGG | - | chr1_3:8399942-8399961 | Msa0101750:CDS | 35.0% |
| TTAGAGTATGTTTGGATGGA+GGG | - | chr1_3:8399943-8399962 | Msa0101750:CDS | 35.0% | |
| TGTGTTTGGATGAAAGTTCT+CGG | + | chr1_3:8400146-8400165 | None:intergenic | 35.0% | |
| AAGAAGCTGAGAAACTATGT+CGG | - | chr1_3:8400213-8400232 | Msa0101750:intron | 35.0% | |
| !! | CAATACTTTTTGGGAAAGGT+AGG | + | chr1_3:8400265-8400284 | None:intergenic | 35.0% |
| ! | ATTTGATGGACAAAACCATC+TGG | + | chr1_3:8400485-8400504 | None:intergenic | 35.0% |
| !!! | AGATGGTTTTGTCCATCAAA+TGG | - | chr1_3:8400484-8400503 | Msa0101750:CDS | 35.0% |
| !! | TGCGGATTAGTTTCATTAAC+TGG | - | chr1_3:8400518-8400537 | Msa0101750:CDS | 35.0% |
| AATCATCTGTTCTTCCATCA+TGG | - | chr1_3:8400584-8400603 | Msa0101750:CDS | 35.0% | |
| ! | TTTACAATATGGCGACCTTT+TGG | - | chr1_3:8400634-8400653 | Msa0101750:CDS | 35.0% |
| !!! | CTTTTGGTTTTCAGATACGA+GGG | - | chr1_3:8400650-8400669 | Msa0101750:CDS | 35.0% |
| ATTCTCACCAAATACTTGCA+CGG | + | chr1_3:8400690-8400709 | None:intergenic | 35.0% | |
| TGGTCTAACCAACTCATAAT+TGG | + | chr1_3:8400906-8400925 | None:intergenic | 35.0% | |
| GTTTCTCTGATCATACTGAT+TGG | + | chr1_3:8400926-8400945 | None:intergenic | 35.0% | |
| TTCCTGTTTGAAAAGGAACA+TGG | + | chr1_3:8400985-8401004 | None:intergenic | 35.0% | |
| GAAAAGAGGACGTAAATGAT+TGG | + | chr1_3:8401301-8401320 | None:intergenic | 35.0% | |
| ATCAAAACCTTCAATGTCAG+TGG | - | chr1_3:8401338-8401357 | Msa0101750:intron | 35.0% | |
| ATCTTCTTGAGAAACTGATC+TGG | - | chr1_3:8401427-8401446 | Msa0101750:intron | 35.0% | |
| AGTGTTTCTCCCTTTATGTA+TGG | - | chr1_3:8401477-8401496 | Msa0101750:intron | 35.0% | |
| TTAGTATCAGTATGGATGGA+TGG | + | chr1_3:8401574-8401593 | None:intergenic | 35.0% | |
| ACTAGGACTTAGTATCAGTA+TGG | + | chr1_3:8401582-8401601 | None:intergenic | 35.0% | |
| AGAATAGTTCAAATCTACCC+AGG | + | chr1_3:8401616-8401635 | None:intergenic | 35.0% | |
| GACAAGAGTAGTAGTAGAAA+AGG | + | chr1_3:8401989-8402008 | None:intergenic | 35.0% | |
| TCAGCAAGAGATTTGTGTTA+AGG | + | chr1_3:8402130-8402149 | None:intergenic | 35.0% | |
| ATAATTTGAAGGGAGAACAC+TGG | - | chr1_3:8402238-8402257 | Msa0101750:CDS | 35.0% | |
| ATTGCTGAGGTTGGAAAAAA+TGG | - | chr1_3:8402405-8402424 | Msa0101750:CDS | 35.0% | |
| TTGCTGAGGTTGGAAAAAAT+GGG | - | chr1_3:8402406-8402425 | Msa0101750:CDS | 35.0% | |
| AGGTTTCTTTGGCATATATC+TGG | + | chr1_3:8402505-8402524 | None:intergenic | 35.0% | |
| ! | GAGCTAACTTTAGGTTTCTT+TGG | + | chr1_3:8402516-8402535 | None:intergenic | 35.0% |
| GCCATTGAATTCAAGAAATC+CGG | - | chr1_3:8402603-8402622 | Msa0101750:intron | 35.0% | |
| ACCGGATTTCTTGAATTCAA+TGG | + | chr1_3:8402607-8402626 | None:intergenic | 35.0% | |
| TTCAACTACTTCGAAGAAGA+TGG | - | chr1_3:8402632-8402651 | Msa0101750:intron | 35.0% | |
| TCAACTACTTCGAAGAAGAT+GGG | - | chr1_3:8402633-8402652 | Msa0101750:intron | 35.0% | |
| !!! | TTATGGGAAGCTTTTGACTT+GGG | + | chr1_3:8402666-8402685 | None:intergenic | 35.0% |
| !! | TTTATGGGAAGCTTTTGACT+TGG | + | chr1_3:8402667-8402686 | None:intergenic | 35.0% |
| AAAGCTTCCCATAAAAAGAC+GGG | - | chr1_3:8402672-8402691 | Msa0101750:intron | 35.0% | |
| ! | AACCTTACCCGTCTTTTTAT+GGG | + | chr1_3:8402682-8402701 | None:intergenic | 35.0% |
| ! | AAACCTTACCCGTCTTTTTA+TGG | + | chr1_3:8402683-8402702 | None:intergenic | 35.0% |
| ATGAAGAAGTTCAATGTCAG+TGG | - | chr1_3:8403103-8403122 | Msa0101750:intron | 35.0% | |
| ! | AAGCGTAACTTCTGTTTTGT+AGG | + | chr1_3:8403272-8403291 | None:intergenic | 35.0% |
| ! | AGAACAATTCACACCTTTTG+TGG | - | chr1_3:8403346-8403365 | Msa0101750:intron | 35.0% |
| ! | GAACAATTCACACCTTTTGT+GGG | - | chr1_3:8403347-8403366 | Msa0101750:intron | 35.0% |
| ! | AACAATTCACACCTTTTGTG+GGG | - | chr1_3:8403348-8403367 | Msa0101750:intron | 35.0% |
| GATGTCATTATCACGAACAA+AGG | + | chr1_3:8403383-8403402 | None:intergenic | 35.0% | |
| AAGGTCTTGACCATCAAATT+GGG | - | chr1_3:8403479-8403498 | Msa0101750:intron | 35.0% | |
| CAAGAACATTAGCAAGTAGA+TGG | + | chr1_3:8403541-8403560 | None:intergenic | 35.0% | |
| TGATACAACTAATTGGGATC+TGG | + | chr1_3:8403666-8403685 | None:intergenic | 35.0% | |
| ATGATAAGAACCAAAAGCAG+TGG | + | chr1_3:8403730-8403749 | None:intergenic | 35.0% | |
| AGTAGTTACGAGGAGAAACA+CGG | + | chr1_3:8399152-8399171 | None:intergenic | 40.0% | |
| ! | ATTAATGGGTCGTGAGTGTA+AGG | - | chr1_3:8399460-8399479 | Msa0101750:CDS | 40.0% |
| ! | TTAATGGGTCGTGAGTGTAA+GGG | - | chr1_3:8399461-8399480 | Msa0101750:CDS | 40.0% |
| AGGTTGAAGAAGGGTTAAAG+AGG | + | chr1_3:8399520-8399539 | None:intergenic | 40.0% | |
| GAGATTGAGAGGTTGAAGAA+GGG | + | chr1_3:8399529-8399548 | None:intergenic | 40.0% | |
| AGAGATTGAGAGGTTGAAGA+AGG | + | chr1_3:8399530-8399549 | None:intergenic | 40.0% | |
| TTCTTCAACCTCTCAATCTC+TGG | - | chr1_3:8399529-8399548 | Msa0101750:CDS | 40.0% | |
| GAAATTACTGTGGGTCATTG+TGG | - | chr1_3:8399773-8399792 | Msa0101750:intron | 40.0% | |
| TCTGATTTCGTCGAACTCAT+GGG | - | chr1_3:8399843-8399862 | Msa0101750:CDS | 40.0% | |
| ACAGATGCAATGTGCATGTT+TGG | + | chr1_3:8399873-8399892 | None:intergenic | 40.0% | |
| ! | TATGTTTGGATGGAGGGTTT+TGG | - | chr1_3:8399949-8399968 | Msa0101750:CDS | 40.0% |
| TTTGGATGAAAGTTCTCGGA+GGG | + | chr1_3:8400142-8400161 | None:intergenic | 40.0% | |
| TCCAAACACACTCTTAAGCA+AGG | - | chr1_3:8400156-8400175 | Msa0101750:intron | 40.0% | |
| ! | ACCTTGCTTAAGAGTGTGTT+TGG | + | chr1_3:8400160-8400179 | None:intergenic | 40.0% |
| TTCTCAGCTTCTTATAGGCT+GGG | + | chr1_3:8400206-8400225 | None:intergenic | 40.0% | |
| TTTCTCAGCTTCTTATAGGC+TGG | + | chr1_3:8400207-8400226 | None:intergenic | 40.0% | |
| TTTGGGAAAGGTAGGACTAT+CGG | + | chr1_3:8400257-8400276 | None:intergenic | 40.0% | |
| TTAATGCAGAGAGTTCCAGA+TGG | - | chr1_3:8400467-8400486 | Msa0101750:CDS | 40.0% | |
| !!! | TGGTTTTGTCCATCAAATGG+AGG | - | chr1_3:8400487-8400506 | Msa0101750:CDS | 40.0% |
| !! | GGTTTTGTCCATCAAATGGA+GGG | - | chr1_3:8400488-8400507 | Msa0101750:CDS | 40.0% |
| GTTTCATTAACTGGTCCTAG+TGG | - | chr1_3:8400527-8400546 | Msa0101750:CDS | 40.0% | |
| ACTTGCCAAGTATTTCCACT+AGG | + | chr1_3:8400545-8400564 | None:intergenic | 40.0% | |
| ATCTGTTCTTCCATCATGGA+TGG | - | chr1_3:8400588-8400607 | Msa0101750:CDS | 40.0% | |
| CAAATGTTGACCATCCATGA+TGG | + | chr1_3:8400601-8400620 | None:intergenic | 40.0% | |
| TCATGGATGGTCAACATTTG+TGG | - | chr1_3:8400601-8400620 | Msa0101750:CDS | 40.0% | |
| CATGGATGGTCAACATTTGT+GGG | - | chr1_3:8400602-8400621 | Msa0101750:CDS | 40.0% | |
| CCTCGTATCTGAAAACCAAA+AGG | + | chr1_3:8400652-8400671 | None:intergenic | 40.0% | |
| !!! | CCTTTTGGTTTTCAGATACG+AGG | - | chr1_3:8400649-8400668 | Msa0101750:CDS | 40.0% |
| CATTTCACCGTGCAAGTATT+TGG | - | chr1_3:8400680-8400699 | Msa0101750:CDS | 40.0% | |
| TGCTGAGGTGATTTCTTCTT+TGG | - | chr1_3:8400793-8400812 | Msa0101750:intron | 40.0% | |
| GAGATGTTCCGAAGAAAATG+AGG | - | chr1_3:8400825-8400844 | Msa0101750:intron | 40.0% | |
| ACTAGCTGAACATTCTTTGC+AGG | + | chr1_3:8400957-8400976 | None:intergenic | 40.0% | |
| ! | GTCCATGTTCCTTTTCAAAC+AGG | - | chr1_3:8400980-8400999 | Msa0101750:intron | 40.0% |
| CAGCAATCCTGTATAGAAGT+GGG | - | chr1_3:8401201-8401220 | Msa0101750:intron | 40.0% | |
| AATCCTGTATAGAAGTGGGA+AGG | - | chr1_3:8401205-8401224 | Msa0101750:intron | 40.0% | |
| ATACGAACCACTGACATTGA+AGG | + | chr1_3:8401348-8401367 | None:intergenic | 40.0% | |
| TCTTGAGAAACTGATCTGGT+TGG | - | chr1_3:8401431-8401450 | Msa0101750:intron | 40.0% | |
| CTTGAGAAACTGATCTGGTT+GGG | - | chr1_3:8401432-8401451 | Msa0101750:intron | 40.0% | |
| TTGAGAAACTGATCTGGTTG+GGG | - | chr1_3:8401433-8401452 | Msa0101750:intron | 40.0% | |
| GTTTCTCCCTTTATGTATGG+AGG | - | chr1_3:8401480-8401499 | Msa0101750:intron | 40.0% | |
| TGCCATCCTCCATACATAAA+GGG | + | chr1_3:8401489-8401508 | None:intergenic | 40.0% | |
| TTGCCATCCTCCATACATAA+AGG | + | chr1_3:8401490-8401509 | None:intergenic | 40.0% | |
| GGACTTAGTATCAGTATGGA+TGG | + | chr1_3:8401578-8401597 | None:intergenic | 40.0% | |
| TCCTAGTTAATGAGTCAACC+TGG | - | chr1_3:8401595-8401614 | Msa0101750:CDS | 40.0% | |
| CCTAGTTAATGAGTCAACCT+GGG | - | chr1_3:8401596-8401615 | Msa0101750:CDS | 40.0% | |
| TACTTAGTGAAGATGCTGCT+TGG | - | chr1_3:8401675-8401694 | Msa0101750:CDS | 40.0% | |
| TAGAAAAGGTCTCGAACTTG+GGG | + | chr1_3:8401881-8401900 | None:intergenic | 40.0% | |
| GTAGAAAAGGTCTCGAACTT+GGG | + | chr1_3:8401882-8401901 | None:intergenic | 40.0% | |
| AGTAGAAAAGGTCTCGAACT+TGG | + | chr1_3:8401883-8401902 | None:intergenic | 40.0% | |
| AGTGTGATGTAGAAGCTTCT+TGG | + | chr1_3:8401956-8401975 | None:intergenic | 40.0% | |
| CTTGTATGCACTCTAGTTGT+TGG | + | chr1_3:8402279-8402298 | None:intergenic | 40.0% | |
| CATACAAGTCACACTCTATG+TGG | - | chr1_3:8402291-8402310 | Msa0101750:CDS | 40.0% | |
| CGTGGCAATAGCATAAAAGT+TGG | - | chr1_3:8402333-8402352 | Msa0101750:CDS | 40.0% | |
| !! | AAAAAATGGGTTAGACTGCC+AGG | - | chr1_3:8402419-8402438 | Msa0101750:CDS | 40.0% |
| !!! | TACAAGCTAGTTTTCCAACC+TGG | + | chr1_3:8402440-8402459 | None:intergenic | 40.0% |
| CTGCACTTTGAGCTAACTTT+AGG | + | chr1_3:8402525-8402544 | None:intergenic | 40.0% | |
| CAACTACTTCGAAGAAGATG+GGG | - | chr1_3:8402634-8402653 | Msa0101750:intron | 40.0% | |
| !!! | TATGGGAAGCTTTTGACTTG+GGG | + | chr1_3:8402665-8402684 | None:intergenic | 40.0% |
| TTCCCATAAAAAGACGGGTA+AGG | - | chr1_3:8402677-8402696 | Msa0101750:intron | 40.0% | |
| TCTTCAACACGATGTTTCCT+CGG | + | chr1_3:8402977-8402996 | None:intergenic | 40.0% | |
| TGAAGATGAACTAAGTTCCC+AGG | - | chr1_3:8402991-8403010 | Msa0101750:intron | 40.0% | |
| TGTCAGTGGATCATACACTT+TGG | - | chr1_3:8403117-8403136 | Msa0101750:intron | 40.0% | |
| AGTGGATCATACACTTTGGT+GGG | - | chr1_3:8403121-8403140 | Msa0101750:intron | 40.0% | |
| ! | TAACTTCTGTTTTGTAGGCG+GGG | + | chr1_3:8403267-8403286 | None:intergenic | 40.0% |
| ! | GTAACTTCTGTTTTGTAGGC+GGG | + | chr1_3:8403268-8403287 | None:intergenic | 40.0% |
| ! | CGTAACTTCTGTTTTGTAGG+CGG | + | chr1_3:8403269-8403288 | None:intergenic | 40.0% |
| CAGAGTTTACAATCCAACAC+TGG | + | chr1_3:8403309-8403328 | None:intergenic | 40.0% | |
| ! | ACAATTCACACCTTTTGTGG+GGG | - | chr1_3:8403349-8403368 | Msa0101750:intron | 40.0% |
| CGTATCTCATTATGTGATGC+AGG | - | chr1_3:8403432-8403451 | Msa0101750:CDS | 40.0% | |
| GTGATGCAGGTTCATATATC+CGG | - | chr1_3:8403445-8403464 | Msa0101750:CDS | 40.0% | |
| TGATGCAGGTTCATATATCC+GGG | - | chr1_3:8403446-8403465 | Msa0101750:CDS | 40.0% | |
| GAAGGTCTTGACCATCAAAT+TGG | - | chr1_3:8403478-8403497 | Msa0101750:intron | 40.0% | |
| ! | ATCTACTAAGCCACTGCTTT+TGG | - | chr1_3:8403717-8403736 | Msa0101750:intron | 40.0% |
| ! | CTTTGGGTTCAGTAGTTACG+AGG | + | chr1_3:8399162-8399181 | None:intergenic | 45.0% |
| CTCGTAACTACTGAACCCAA+AGG | - | chr1_3:8399160-8399179 | Msa0101750:three_prime_UTR | 45.0% | |
| GAGAGAGAGAGAGAACCTTT+GGG | + | chr1_3:8399178-8399197 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAACCTT+TGG | + | chr1_3:8399179-8399198 | None:intergenic | 45.0% | |
| ! | ACTGTGGGTCATTGTGGTTT+TGG | - | chr1_3:8399779-8399798 | Msa0101750:intron | 45.0% |
| ACGAAATCAGAGTGGCATTC+TGG | + | chr1_3:8399834-8399853 | None:intergenic | 45.0% | |
| TGAGTTCGACGAAATCAGAG+TGG | + | chr1_3:8399842-8399861 | None:intergenic | 45.0% | |
| CTCTGATTTCGTCGAACTCA+TGG | - | chr1_3:8399842-8399861 | Msa0101750:CDS | 45.0% | |
| CTGATTTCGTCGAACTCATG+GGG | - | chr1_3:8399844-8399863 | Msa0101750:CDS | 45.0% | |
| TTGGATGAAAGTTCTCGGAG+GGG | + | chr1_3:8400141-8400160 | None:intergenic | 45.0% | |
| GTTTGGATGAAAGTTCTCGG+AGG | + | chr1_3:8400143-8400162 | None:intergenic | 45.0% | |
| CACACTCTTAAGCAAGGTGA+AGG | - | chr1_3:8400162-8400181 | Msa0101750:intron | 45.0% | |
| AAAGGTAGGACTATCGGATC+GGG | + | chr1_3:8400251-8400270 | None:intergenic | 45.0% | |
| GAAAGGTAGGACTATCGGAT+CGG | + | chr1_3:8400252-8400271 | None:intergenic | 45.0% | |
| ACTGGAAATTGAGGACTGTC+TGG | + | chr1_3:8400358-8400377 | None:intergenic | 45.0% | |
| CTGGTCCTAGTGGAAATACT+TGG | - | chr1_3:8400537-8400556 | Msa0101750:CDS | 45.0% | |
| ! | GCAAGTTCGATTAGTTGAGC+AGG | - | chr1_3:8400559-8400578 | Msa0101750:CDS | 45.0% |
| AGGACAGAAAAGTGATGCTG+AGG | - | chr1_3:8400778-8400797 | Msa0101750:intron | 45.0% | |
| TTACCAGCAATAGCCAACTC+AGG | + | chr1_3:8400875-8400894 | None:intergenic | 45.0% | |
| GCAGCAATCCTGTATAGAAG+TGG | - | chr1_3:8401200-8401219 | Msa0101750:intron | 45.0% | |
| CTTCCTTCCCACTTCTATAC+AGG | + | chr1_3:8401211-8401230 | None:intergenic | 45.0% | |
| GATGACCACGATATTCTCAG+CGG | - | chr1_3:8401230-8401249 | Msa0101750:intron | 45.0% | |
| TGTCAGTGGTTCGTATACTC+TGG | - | chr1_3:8401352-8401371 | Msa0101750:intron | 45.0% | |
| CTCCCTTTATGTATGGAGGA+TGG | - | chr1_3:8401484-8401503 | Msa0101750:intron | 45.0% | |
| ! | CCCAGGTTGACTCATTAACT+AGG | + | chr1_3:8401599-8401618 | None:intergenic | 45.0% |
| CCAACATGCATTGAAGTGCA+AGG | + | chr1_3:8401642-8401661 | None:intergenic | 45.0% | |
| CCTTGCACTTCAATGCATGT+TGG | - | chr1_3:8401639-8401658 | Msa0101750:CDS | 45.0% | |
| ACAAGTCACACTCTATGTGG+AGG | - | chr1_3:8402294-8402313 | Msa0101750:CDS | 45.0% | |
| ATTACGTGTTCGCATTGCTG+AGG | - | chr1_3:8402392-8402411 | Msa0101750:CDS | 45.0% | |
| TAGCTCAAAGTGCAGAACGA+AGG | - | chr1_3:8402530-8402549 | Msa0101750:intron | 45.0% | |
| CGAAGTAGTTGAAGCTCTAC+CGG | + | chr1_3:8402625-8402644 | None:intergenic | 45.0% | |
| !!! | ATGGGAAGCTTTTGACTTGG+GGG | + | chr1_3:8402664-8402683 | None:intergenic | 45.0% |
| TCCTCTATTTGCCCACTAGA+TGG | - | chr1_3:8402704-8402723 | Msa0101750:intron | 45.0% | |
| AAACAAAGACAGCTGTACCG+AGG | - | chr1_3:8402957-8402976 | Msa0101750:intron | 45.0% | |
| ! | TCTCAAACCAGCTTTAGCCT+GGG | + | chr1_3:8403011-8403030 | None:intergenic | 45.0% |
| ! | TTCTCAAACCAGCTTTAGCC+TGG | + | chr1_3:8403012-8403031 | None:intergenic | 45.0% |
| CAGTGGATCATACACTTTGG+TGG | - | chr1_3:8403120-8403139 | Msa0101750:intron | 45.0% | |
| GTGCAGCAGAGAACTGATAT+GGG | + | chr1_3:8403240-8403259 | None:intergenic | 45.0% | |
| TGTGCAGCAGAGAACTGATA+TGG | + | chr1_3:8403241-8403260 | None:intergenic | 45.0% | |
| GTTACGCTTCGCAATTCAAG+AGG | - | chr1_3:8403283-8403302 | Msa0101750:intron | 45.0% | |
| AACTCTGTTCCAGATGCCAA+AGG | - | chr1_3:8403322-8403341 | Msa0101750:intron | 45.0% | |
| ATTGTTCTGCCTTTGGCATC+TGG | + | chr1_3:8403334-8403353 | None:intergenic | 45.0% | |
| GGTGTGAATTGTTCTGCCTT+TGG | + | chr1_3:8403341-8403360 | None:intergenic | 45.0% | |
| GATGCAGGTTCATATATCCG+GGG | - | chr1_3:8403447-8403466 | Msa0101750:CDS | 45.0% | |
| TCATATATCCGGGGTTGGAA+AGG | - | chr1_3:8403456-8403475 | Msa0101750:CDS | 45.0% | |
| GTTTCACGTGCCCAATTTGA+TGG | + | chr1_3:8403492-8403511 | None:intergenic | 45.0% | |
| TCAGTAGGCTCGTGAAATGT+TGG | - | chr1_3:8403776-8403795 | Msa0101750:five_prime_UTR | 45.0% | |
| ! | GTGAAATGTTGGTCTGGTAG+AGG | - | chr1_3:8403787-8403806 | Msa0101750:five_prime_UTR | 45.0% |
| GTTACGAGGAGAAACACGGA+GGG | + | chr1_3:8399148-8399167 | None:intergenic | 50.0% | |
| AGTTACGAGGAGAAACACGG+AGG | + | chr1_3:8399149-8399168 | None:intergenic | 50.0% | |
| !! | GTTTGGATGGAGGGTTTTGG+AGG | - | chr1_3:8399952-8399971 | Msa0101750:CDS | 50.0% |
| CAGCTTCTTATAGGCTGGGA+GGG | + | chr1_3:8400202-8400221 | None:intergenic | 50.0% | |
| TCAGCTTCTTATAGGCTGGG+AGG | + | chr1_3:8400203-8400222 | None:intergenic | 50.0% | |
| ATGTCGTGCCCTCCATTTGA+TGG | + | chr1_3:8400499-8400518 | None:intergenic | 50.0% | |
| ! | GCGTCGCACCTCATTTTCTT+CGG | + | chr1_3:8400836-8400855 | None:intergenic | 50.0% |
| AAGCTCCGCTGAGAATATCG+TGG | + | chr1_3:8401238-8401257 | None:intergenic | 50.0% | |
| GTCACACTCTATGTGGAGGA+TGG | - | chr1_3:8402298-8402317 | Msa0101750:CDS | 50.0% | |
| CACTCTATGTGGAGGATGGA+TGG | - | chr1_3:8402302-8402321 | Msa0101750:CDS | 50.0% | |
| ! | GGATGGATGGCTTTTGTTCG+TGG | - | chr1_3:8402315-8402334 | Msa0101750:CDS | 50.0% |
| !! | AATGGGTTAGACTGCCAGGT+TGG | - | chr1_3:8402423-8402442 | Msa0101750:CDS | 50.0% |
| ! | GCCATCTAGTGGGCAAATAG+AGG | + | chr1_3:8402708-8402727 | None:intergenic | 50.0% |
| CTAAGTTCCCAGGCTAAAGC+TGG | - | chr1_3:8403001-8403020 | Msa0101750:intron | 50.0% | |
| GCAATTCAAGAGGCCAGTGT+TGG | - | chr1_3:8403293-8403312 | Msa0101750:intron | 50.0% | |
| ! | TTCACACCTTTTGTGGGGGA+TGG | - | chr1_3:8403353-8403372 | Msa0101750:intron | 50.0% |
| CAGGTTCATATATCCGGGGT+TGG | - | chr1_3:8403451-8403470 | Msa0101750:CDS | 50.0% | |
| ATATCCGGGGTTGGAAAGGA+AGG | - | chr1_3:8403460-8403479 | Msa0101750:CDS | 50.0% | |
| AAGACCTTCCTTTCCAACCC+CGG | + | chr1_3:8403467-8403486 | None:intergenic | 50.0% | |
| AGGCTCGTGAAATGTTGGTC+TGG | - | chr1_3:8403781-8403800 | Msa0101750:five_prime_UTR | 50.0% | |
| ACACGGAGGGACAGTGTTGT+CGG | + | chr1_3:8399135-8399154 | None:intergenic | 55.0% | |
| ! | TTTGACCAGGTGTTGCGCTG+AGG | - | chr1_3:8399293-8399312 | Msa0101750:three_prime_UTR | 55.0% |
| TGAAAGTTCTCGGAGGGGAG+AGG | + | chr1_3:8400136-8400155 | None:intergenic | 55.0% | |
| TAGGCTGGGAGGGAAAGTGA+GGG | + | chr1_3:8400192-8400211 | None:intergenic | 55.0% | |
| ATAGGCTGGGAGGGAAAGTG+AGG | + | chr1_3:8400193-8400212 | None:intergenic | 55.0% | |
| ! | CAAATGGAGGGCACGACATG+CGG | - | chr1_3:8400500-8400519 | Msa0101750:CDS | 55.0% |
| CAATAGCCAACTCAGGCTCC+TGG | + | chr1_3:8400868-8400887 | None:intergenic | 55.0% | |
| ! | GAGCCTGAGTTGGCTATTGC+TGG | - | chr1_3:8400869-8400888 | Msa0101750:intron | 55.0% |
| CGTGTTCGCATTGCTGAGGT+TGG | - | chr1_3:8402396-8402415 | Msa0101750:CDS | 55.0% | |
| GGCTATCCATCCCCCACAAA+AGG | + | chr1_3:8403362-8403381 | None:intergenic | 55.0% | |
| CTTTGCCTCAGCGCAACACC+TGG | + | chr1_3:8399301-8399320 | None:intergenic | 60.0% | |
| ! | CAGGTGTTGCGCTGAGGCAA+AGG | - | chr1_3:8399299-8399318 | Msa0101750:three_prime_UTR | 60.0% |
| ! | CTCAGGCTCCTGGTTCTCGA+TGG | + | chr1_3:8400858-8400877 | None:intergenic | 60.0% |
| CGAGAACCAGGAGCCTGAGT+TGG | - | chr1_3:8400859-8400878 | Msa0101750:intron | 60.0% | |
| GTTCTCGGAGGGGAGAGGAG+TGG | + | chr1_3:8400131-8400150 | None:intergenic | 65.0% | |
| GTGCGACGCCATCGAGAACC+AGG | - | chr1_3:8400847-8400866 | Msa0101750:intron | 65.0% | |
| CTCGGAGGGGAGAGGAGTGG+AGG | + | chr1_3:8400128-8400147 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 8399028 | 8403919 | 8399028 | ID=Msa0101750;Name=Msa0101750 |
| chr1_3 | mRNA | 8399028 | 8403919 | 8399028 | ID=Msa0101750-mRNA-1;Parent=Msa0101750;Name=Msa0101750-mRNA-1;_AED=0.38;_eAED=0.38;_QI=296|1|1|1|0.71|0.62|8|394|596 |
| chr1_3 | exon | 8399028 | 8399715 | 8399028 | ID=Msa0101750-mRNA-1:exon:3367;Parent=Msa0101750-mRNA-1 |
| chr1_3 | exon | 8399809 | 8399978 | 8399809 | ID=Msa0101750-mRNA-1:exon:3366;Parent=Msa0101750-mRNA-1 |
| chr1_3 | exon | 8400254 | 8400770 | 8400254 | ID=Msa0101750-mRNA-1:exon:3365;Parent=Msa0101750-mRNA-1 |
| chr1_3 | exon | 8401574 | 8401749 | 8401574 | ID=Msa0101750-mRNA-1:exon:3364;Parent=Msa0101750-mRNA-1 |
| chr1_3 | exon | 8401925 | 8402471 | 8401925 | ID=Msa0101750-mRNA-1:exon:3363;Parent=Msa0101750-mRNA-1 |
| chr1_3 | exon | 8403397 | 8403487 | 8403397 | ID=Msa0101750-mRNA-1:exon:3362;Parent=Msa0101750-mRNA-1 |
| chr1_3 | exon | 8403508 | 8403645 | 8403508 | ID=Msa0101750-mRNA-1:exon:3361;Parent=Msa0101750-mRNA-1 |
| chr1_3 | exon | 8403766 | 8403919 | 8403766 | ID=Msa0101750-mRNA-1:exon:3360;Parent=Msa0101750-mRNA-1 |
| chr1_3 | five_prime_UTR | 8403766 | 8403919 | 8403766 | ID=Msa0101750-mRNA-1:five_prime_utr;Parent=Msa0101750-mRNA-1 |
| chr1_3 | five_prime_UTR | 8403508 | 8403645 | 8403508 | ID=Msa0101750-mRNA-1:five_prime_utr;Parent=Msa0101750-mRNA-1 |
| chr1_3 | five_prime_UTR | 8403484 | 8403487 | 8403484 | ID=Msa0101750-mRNA-1:five_prime_utr;Parent=Msa0101750-mRNA-1 |
| chr1_3 | CDS | 8403397 | 8403483 | 8403397 | ID=Msa0101750-mRNA-1:cds;Parent=Msa0101750-mRNA-1 |
| chr1_3 | CDS | 8401925 | 8402471 | 8401925 | ID=Msa0101750-mRNA-1:cds;Parent=Msa0101750-mRNA-1 |
| chr1_3 | CDS | 8401574 | 8401749 | 8401574 | ID=Msa0101750-mRNA-1:cds;Parent=Msa0101750-mRNA-1 |
| chr1_3 | CDS | 8400254 | 8400770 | 8400254 | ID=Msa0101750-mRNA-1:cds;Parent=Msa0101750-mRNA-1 |
| chr1_3 | CDS | 8399809 | 8399978 | 8399809 | ID=Msa0101750-mRNA-1:cds;Parent=Msa0101750-mRNA-1 |
| chr1_3 | CDS | 8399422 | 8399715 | 8399422 | ID=Msa0101750-mRNA-1:cds;Parent=Msa0101750-mRNA-1 |
| chr1_3 | three_prime_UTR | 8399028 | 8399421 | 8399028 | ID=Msa0101750-mRNA-1:three_prime_utr;Parent=Msa0101750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
