Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0803920 | XP_003612953.2 | 98.982 | 786 | 8 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1608 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0803920 | sp|Q94AM1|OOPDA_ARATH | 77.440 | 789 | 159 | 3 | 15 | 786 | 1 | 787 | 0.0 | 1233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0803920 | G7KGF6 | 98.982 | 786 | 8 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1608 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011850 | Msa0803920 | 0.816799 | 4.589988e-52 | -8.615850e-47 |
| Msa0017940 | Msa0803920 | 0.801460 | 8.910607e-49 | -8.615850e-47 |
| Msa0030000 | Msa0803920 | 0.831486 | 1.624468e-55 | -8.615850e-47 |
| Msa0032120 | Msa0803920 | 0.850343 | 1.805821e-60 | -8.615850e-47 |
| Msa0032400 | Msa0803920 | 0.837564 | 4.824420e-57 | -8.615850e-47 |
| Msa0681890 | Msa0803920 | 0.804561 | 2.036377e-49 | -8.615850e-47 |
| Msa0706530 | Msa0803920 | 0.806144 | 9.486844e-50 | -8.615850e-47 |
| Msa0709480 | Msa0803920 | 0.844975 | 5.418069e-59 | -8.615850e-47 |
| Msa0720840 | Msa0803920 | 0.941114 | 7.298185e-101 | -8.615850e-47 |
| Msa0726440 | Msa0803920 | 0.802827 | 4.664592e-49 | -8.615850e-47 |
| Msa0726610 | Msa0803920 | 0.807728 | 4.387536e-50 | -8.615850e-47 |
| Msa0730180 | Msa0803920 | 0.803608 | 3.214247e-49 | -8.615850e-47 |
| Msa0748930 | Msa0803920 | 0.807665 | 4.524252e-50 | -8.615850e-47 |
| Msa0761320 | Msa0803920 | 0.884982 | 1.203688e-71 | -8.615850e-47 |
| Msa0770430 | Msa0803920 | 0.802463 | 5.543267e-49 | -8.615850e-47 |
| Msa0790830 | Msa0803920 | 0.809394 | 1.933716e-50 | -8.615850e-47 |
| Msa0803920 | Msa0841970 | 0.939707 | 8.079966e-100 | -8.615850e-47 |
| Msa0803920 | Msa0854590 | 0.811093 | 8.318712e-51 | -8.615850e-47 |
| Msa0803920 | Msa0890250 | 0.802426 | 5.643411e-49 | -8.615850e-47 |
| Msa0803920 | Msa0901100 | 0.815994 | 6.949044e-52 | -8.615850e-47 |
| Msa0803920 | Msa0969570 | 0.813595 | 2.364013e-51 | -8.615850e-47 |
| Msa0803920 | Msa1008490 | 0.808540 | 2.945468e-50 | -8.615850e-47 |
| Msa0803920 | Msa1018050 | 0.820104 | 8.179105e-53 | -8.615850e-47 |
| Msa0803920 | Msa1020710 | 0.859917 | 2.966876e-63 | -8.615850e-47 |
| Msa0803920 | Msa1023960 | 0.824177 | 9.298564e-54 | -8.615850e-47 |
| Msa0803920 | Msa1063850 | 0.817031 | 4.070589e-52 | -8.615850e-47 |
| Msa0803920 | Msa1073840 | 0.830289 | 3.194069e-55 | -8.615850e-47 |
| Msa0803920 | Msa1084490 | 0.843611 | 1.259731e-58 | -8.615850e-47 |
| Msa0803920 | Msa1099030 | 0.838236 | 3.241543e-57 | -8.615850e-47 |
| Msa0803920 | Msa1122160 | 0.823387 | 1.423942e-53 | -8.615850e-47 |
| Msa0803920 | Msa1125780 | 0.832717 | 8.062211e-56 | -8.615850e-47 |
| Msa0803920 | Msa1125950 | 0.833052 | 6.655811e-56 | -8.615850e-47 |
| Msa0803920 | Msa1159100 | 0.816489 | 5.386995e-52 | -8.615850e-47 |
| Msa0803920 | Msa1171340 | 0.829089 | 6.256658e-55 | -8.615850e-47 |
| Msa0803920 | Msa1176690 | 0.804622 | 1.977695e-49 | -8.615850e-47 |
| Msa0803920 | Msa1211070 | 0.827919 | 1.199318e-54 | -8.615850e-47 |
| Msa0803920 | Msa1229660 | 0.834123 | 3.595975e-56 | -8.615850e-47 |
| Msa0803920 | Msa1237030 | 0.815723 | 7.987435e-52 | -8.615850e-47 |
| Msa0803920 | Msa1265070 | 0.837960 | 3.817134e-57 | -8.615850e-47 |
| Msa0803920 | Msa1265260 | 0.803431 | 3.498462e-49 | -8.615850e-47 |
| Msa0803920 | Msa1309240 | 0.800259 | 1.567043e-48 | -8.615850e-47 |
| Msa0803920 | Msa1310340 | 0.830989 | 2.152045e-55 | -8.615850e-47 |
| Msa0803920 | Msa1327760 | 0.811870 | 5.638332e-51 | -8.615850e-47 |
| Msa0803920 | Msa1362510 | 0.802011 | 6.867106e-49 | -8.615850e-47 |
| Msa0803920 | Msa1375630 | 0.828234 | 1.007069e-54 | -8.615850e-47 |
| Msa0803920 | Msa1376530 | 0.838090 | 3.536146e-57 | -8.615850e-47 |
| Msa0803920 | Msa1376640 | 0.800364 | 1.492287e-48 | -8.615850e-47 |
| Msa0803920 | Msa1398480 | 0.829763 | 4.290440e-55 | -8.615850e-47 |
| Msa0803920 | Msa1419850 | 0.803436 | 3.489013e-49 | -8.615850e-47 |
| Msa0803920 | Msa1425250 | 0.807403 | 5.141178e-50 | -8.615850e-47 |
| Msa0803920 | Msa1450030 | 0.805647 | 1.206607e-49 | -8.615850e-47 |
| Msa0803920 | Msa1454020 | 0.827072 | 1.913961e-54 | -8.615850e-47 |
| Msa0171780 | Msa0803920 | 0.801198 | 1.008196e-48 | -8.615850e-47 |
| Msa0185550 | Msa0803920 | 0.810606 | 1.060110e-50 | -8.615850e-47 |
| Msa0185700 | Msa0803920 | 0.832714 | 8.076733e-56 | -8.615850e-47 |
| Msa0207000 | Msa0803920 | 0.815832 | 7.551549e-52 | -8.615850e-47 |
| Msa0227510 | Msa0803920 | 0.804727 | 1.880033e-49 | -8.615850e-47 |
| Msa0368660 | Msa0803920 | 0.830792 | 2.405739e-55 | -8.615850e-47 |
| Msa0374070 | Msa0803920 | 0.808769 | 2.632203e-50 | -8.615850e-47 |
| Msa0380310 | Msa0803920 | 0.803900 | 2.795071e-49 | -8.615850e-47 |
| Msa0380420 | Msa0803920 | 0.829446 | 5.124988e-55 | -8.615850e-47 |
| Msa0420700 | Msa0803920 | 0.826375 | 2.807696e-54 | -8.615850e-47 |
| Msa0423250 | Msa0803920 | 0.809742 | 1.628283e-50 | -8.615850e-47 |
| Msa0468610 | Msa0803920 | 0.811184 | 7.949464e-51 | -8.615850e-47 |
| Msa0476150 | Msa0803920 | 0.803736 | 3.023635e-49 | -8.615850e-47 |
| Msa0265820 | Msa0803920 | 0.801282 | 9.690935e-49 | -8.615850e-47 |
| Msa0514000 | Msa0803920 | 0.809787 | 1.592050e-50 | -8.615850e-47 |
| Msa0514490 | Msa0803920 | 0.812240 | 4.682321e-51 | -8.615850e-47 |
| Msa0546840 | Msa0803920 | 0.825839 | 3.766407e-54 | -8.615850e-47 |
| Msa0581460 | Msa0803920 | 0.804861 | 1.762607e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0803920 | MtrunA17_Chr5g0411651 | 98.982 | 786 | 8 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1608 |
| Msa0803920 | MtrunA17_Chr3g0123041 | 27.787 | 583 | 373 | 17 | 199 | 773 | 153 | 695 | 1.64e-54 | 200 |
| Msa0803920 | MtrunA17_Chr3g0079521 | 24.096 | 664 | 453 | 18 | 137 | 784 | 66 | 694 | 4.80e-47 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0803920 | AT5G65620.2 | 76.588 | 803 | 169 | 3 | 1 | 786 | 1 | 801 | 0.0 | 1241 |
| Msa0803920 | AT5G65620.1 | 77.440 | 789 | 159 | 3 | 15 | 786 | 1 | 787 | 0.0 | 1233 |
| Msa0803920 | AT5G10540.1 | 81.662 | 698 | 128 | 0 | 89 | 786 | 2 | 699 | 0.0 | 1209 |
| Msa0803920 | AT1G67690.1 | 26.268 | 552 | 365 | 16 | 233 | 778 | 187 | 702 | 3.55e-49 | 185 |
| Msa0803920 | AT5G51540.1 | 24.540 | 652 | 438 | 18 | 140 | 771 | 67 | 684 | 2.60e-48 | 182 |
Find 181 sgRNAs with CRISPR-Local
Find 550 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTACCTTCTCAGTTTA+TGG | 0.075843 | 5_3:-19397104 | Msa0803920:CDS |
| GAGACTGTCTTCCATGAATT+TGG | 0.180270 | 5_3:-19397205 | Msa0803920:CDS |
| GGATAGGTTGGCTGTTGTTT+GGG | 0.205666 | 5_3:-19402480 | Msa0803920:CDS |
| TCGTGCTCTTCTTGAGAAAT+TGG | 0.224630 | 5_3:-19403154 | Msa0803920:intron |
| TAAGAACTGCCTCCTTTATT+TGG | 0.229698 | 5_3:+19401369 | None:intergenic |
| AGCTTCTGATATACGTCTTC+TGG | 0.235471 | 5_3:+19396884 | None:intergenic |
| ATGAGACACGAAGCACTTAT+TGG | 0.235646 | 5_3:-19403513 | Msa0803920:CDS |
| TGGATAGGTTGGCTGTTGTT+TGG | 0.249872 | 5_3:-19402481 | Msa0803920:CDS |
| TTGATTTAGAAAGACTTTAA+TGG | 0.272313 | 5_3:-19396942 | Msa0803920:intron |
| CACTTCAACACATGCTTACT+AGG | 0.287061 | 5_3:-19397177 | Msa0803920:CDS |
| CTTCTCAGTTTATGGAAAAC+TGG | 0.306346 | 5_3:-19397096 | Msa0803920:CDS |
| AGCTTCAGTCATATATTTGC+AGG | 0.317151 | 5_3:-19396187 | Msa0803920:intron |
| TTCACCTTCGTTTACTTGTT+CGG | 0.325252 | 5_3:-19403286 | Msa0803920:CDS |
| AGGGTCTAGTTGCTGGTATT+AGG | 0.327586 | 5_3:-19397147 | Msa0803920:CDS |
| AAAATTTGGGGAGAACGTTC+TGG | 0.328152 | 5_3:-19400723 | Msa0803920:CDS |
| AGGGAGACCATTCTTGCTCT+TGG | 0.328299 | 5_3:-19395338 | Msa0803920:CDS |
| GGATTACCTGCTACTGCTCT+TGG | 0.328426 | 5_3:-19400650 | Msa0803920:CDS |
| ATACATAATTGTGGTTGTTA+AGG | 0.334938 | 5_3:-19394969 | Msa0803920:three_prime_UTR |
| ATAAAGGAGGCAGTTCTTAA+TGG | 0.339071 | 5_3:-19401365 | Msa0803920:CDS |
| GGGTCTAGTTGCTGGTATTA+GGG | 0.341623 | 5_3:-19397146 | Msa0803920:CDS |
| CACATTGGGACATTAGCTTT+TGG | 0.345362 | 5_3:-19399731 | Msa0803920:CDS |
| TGATTTAGAAAGACTTTAAT+GGG | 0.346240 | 5_3:-19396941 | Msa0803920:intron |
| AATCCCTTCCTTGTCCCCTT+TGG | 0.350778 | 5_3:-19403353 | Msa0803920:CDS |
| TCGAGCATCGAGTGGTGATT+TGG | 0.351443 | 5_3:-19400381 | Msa0803920:CDS |
| TTTATCAACAGTTGCCATCT+TGG | 0.353309 | 5_3:+19400202 | None:intergenic |
| GCCTAAGTTGGTAGAACCTT+TGG | 0.367143 | 5_3:-19402513 | Msa0803920:CDS |
| AGAATGCTTAGGGTTGAAAA+AGG | 0.370003 | 5_3:+19403380 | None:intergenic |
| TTCTCTGCATTTGAGGATGC+AGG | 0.375358 | 5_3:-19395631 | Msa0803920:CDS |
| TAGAAACGGGACACAAGTTC+AGG | 0.377165 | 5_3:-19395358 | Msa0803920:CDS |
| TGCACAAAGCGCAGTATCTA+AGG | 0.381372 | 5_3:-19400621 | Msa0803920:intron |
| AGAAGCTTCGTAAAGCTTCC+TGG | 0.381601 | 5_3:-19400163 | Msa0803920:CDS |
| CTTCATACAAAATATGTTCC+TGG | 0.382795 | 5_3:-19396298 | Msa0803920:CDS |
| GGTCTTTAGAAAATTTCTTA+AGG | 0.383307 | 5_3:+19399781 | None:intergenic |
| TCAAGAAGAGCACGAATTCC+CGG | 0.388964 | 5_3:+19403162 | None:intergenic |
| AGATGCTTTCTCTGCATTTG+AGG | 0.398525 | 5_3:-19395638 | Msa0803920:CDS |
| CGATTCAAGACTCTCCTGAT+TGG | 0.407241 | 5_3:-19401873 | Msa0803920:CDS |
| AAAATTTGCAACTGTCGATC+TGG | 0.407728 | 5_3:-19396323 | Msa0803920:CDS |
| TACCTTTGCAGACCAAATAA+AGG | 0.408649 | 5_3:-19401381 | Msa0803920:intron |
| TCTGCGATCAACATCATAGA+TGG | 0.409287 | 5_3:+19396264 | None:intergenic |
| GAAGATGAGGGTCTAGTTGC+TGG | 0.410208 | 5_3:-19397154 | Msa0803920:CDS |
| AGGGATTTATGAGAATGCTT+AGG | 0.411147 | 5_3:+19403369 | None:intergenic |
| CAATGGCCTAATTGCAGCTT+AGG | 0.414174 | 5_3:-19395049 | Msa0803920:exon |
| GGGATTTATGAGAATGCTTA+GGG | 0.418338 | 5_3:+19403370 | None:intergenic |
| GATTACCTGCTACTGCTCTT+GGG | 0.426451 | 5_3:-19400649 | Msa0803920:CDS |
| GAAAATGCCACCGCTGAGAA+TGG | 0.428871 | 5_3:-19400503 | Msa0803920:CDS |
| AAGAGTCCATCCATAACATT+TGG | 0.435222 | 5_3:+19399009 | None:intergenic |
| TGTTCTGTAGGAACGTGATT+TGG | 0.437308 | 5_3:-19402567 | Msa0803920:intron |
| ACAGTTTAACAAAATTGAAC+AGG | 0.437317 | 5_3:-19401315 | Msa0803920:intron |
| GATAGGTTGGCTGTTGTTTG+GGG | 0.438512 | 5_3:-19402479 | Msa0803920:CDS |
| ACCTGCTACTGCTCTTGGGT+TGG | 0.439003 | 5_3:-19400645 | Msa0803920:CDS |
| ACCATTCTTGCTCTTGGAGG+TGG | 0.441175 | 5_3:-19395332 | Msa0803920:CDS |
| AAACTTGGCTTGCTTCCTAC+TGG | 0.443627 | 5_3:+19398633 | None:intergenic |
| TCGCTAAGTGTCTTCCAATC+AGG | 0.444065 | 5_3:+19401859 | None:intergenic |
| TTTAAAGCTGAGGTTGGAAA+AGG | 0.445783 | 5_3:-19400333 | Msa0803920:CDS |
| TACACAGGCTGTTGTAGAAA+CGG | 0.446001 | 5_3:-19395372 | Msa0803920:intron |
| GGAAAAGGAAGAAGACCAAA+GGG | 0.448040 | 5_3:+19403338 | None:intergenic |
| ACACAGGCTGTTGTAGAAAC+GGG | 0.450144 | 5_3:-19395371 | Msa0803920:intron |
| AGTGCCAGCACGATAAGTTC+TGG | 0.452574 | 5_3:+19396853 | None:intergenic |
| AGCTGATGATTTGACACATT+GGG | 0.453880 | 5_3:-19399745 | Msa0803920:CDS |
| GCCACCTCCAAGAGCAAGAA+TGG | 0.454854 | 5_3:+19395331 | None:intergenic |
| TAATCATCTCAAAGCTGTTA+AGG | 0.456249 | 5_3:-19402450 | Msa0803920:CDS |
| TACTTGTTCGGCTTCTTCCA+TGG | 0.461561 | 5_3:-19403274 | Msa0803920:CDS |
| TGCATTTGAGGATGCAGGAT+TGG | 0.466218 | 5_3:-19395626 | Msa0803920:CDS |
| GAGACCATTCTTGCTCTTGG+AGG | 0.466637 | 5_3:-19395335 | Msa0803920:CDS |
| TTCTAAAGACCAGGGTGCAT+TGG | 0.468313 | 5_3:-19399769 | Msa0803920:CDS |
| CTCTATCCTAAGCTGCAATT+AGG | 0.469049 | 5_3:+19395043 | None:intergenic |
| CTAATTGCAGCTTAGGATAG+AGG | 0.471602 | 5_3:-19395042 | Msa0803920:exon |
| GCTTCTGATATACGTCTTCT+GGG | 0.472090 | 5_3:+19396885 | None:intergenic |
| TTCATACAAAATATGTTCCT+GGG | 0.472245 | 5_3:-19396297 | Msa0803920:CDS |
| ACCTTGTACTGCAGCATCCC+AGG | 0.474341 | 5_3:+19400145 | None:intergenic |
| TTGTGTCTGAGCAATGCATC+TGG | 0.474510 | 5_3:+19395069 | None:intergenic |
| GAAGTGCGTGTCCAAATTCA+TGG | 0.479227 | 5_3:+19397194 | None:intergenic |
| AAAATGCCACCGCTGAGAAT+GGG | 0.481659 | 5_3:-19400502 | Msa0803920:CDS |
| GTTATTGTAGTTGAGAAGCT+TGG | 0.482142 | 5_3:+19400310 | None:intergenic |
| AACGGAGTGTGGAACCTTCG+TGG | 0.487427 | 5_3:-19402535 | Msa0803920:CDS |
| TCCTGGGATGCTGCAGTACA+AGG | 0.493226 | 5_3:-19400146 | Msa0803920:intron |
| TTCGCTTCAACAACATCAAA+AGG | 0.496202 | 5_3:+19403195 | None:intergenic |
| TCACGGAATGTCATTAAACT+TGG | 0.498854 | 5_3:+19398618 | None:intergenic |
| TGAATCAATGCAGAAGGAAA+AGG | 0.499062 | 5_3:+19403323 | None:intergenic |
| TGAAGCGAAGCATGTGAGAC+CGG | 0.499274 | 5_3:-19403181 | Msa0803920:CDS |
| ATCAAGAGCAGAAGCAGCCA+TGG | 0.501446 | 5_3:+19403257 | None:intergenic |
| GAAGAAGACCAAAGGGGACA+AGG | 0.501580 | 5_3:+19403345 | None:intergenic |
| CTGAGCAATGCATCTGGTGT+TGG | 0.501895 | 5_3:+19395075 | None:intergenic |
| AAGTACCTGCACATCTTCAA+TGG | 0.503459 | 5_3:+19402406 | None:intergenic |
| AAAGCTCATTACAGATAAGA+AGG | 0.504735 | 5_3:-19400681 | Msa0803920:CDS |
| TCCAAAGGTTCTACCAACTT+AGG | 0.505439 | 5_3:+19402512 | None:intergenic |
| TTGTTAGGTGGATATGCAGC+TGG | 0.507023 | 5_3:-19395827 | Msa0803920:intron |
| CGCCTGATGGTAACTCATCA+AGG | 0.512302 | 5_3:-19398692 | Msa0803920:CDS |
| GCCAGCTGACGGTCTAGCTC+CGG | 0.513713 | 5_3:-19398950 | Msa0803920:intron |
| GCCAACCCAAGAGCAGTAGC+AGG | 0.516424 | 5_3:+19400644 | None:intergenic |
| GCTTTGAACGCATTATAAAG+AGG | 0.517387 | 5_3:+19401895 | None:intergenic |
| ACAGATAAGAAGGAGATTGA+AGG | 0.520338 | 5_3:-19400671 | Msa0803920:CDS |
| AGGAATCTGTCCTCTGGCAA+TGG | 0.520908 | 5_3:+19396214 | None:intergenic |
| TTCAGCCATTGAAGATGTGC+AGG | 0.521027 | 5_3:-19402411 | Msa0803920:intron |
| TCTCTGCCAAATGTTATGGA+TGG | 0.522804 | 5_3:-19399015 | Msa0803920:CDS |
| TTTCGTGTCAAAGATTCCTC+AGG | 0.523767 | 5_3:-19398816 | Msa0803920:CDS |
| AACCTTGATGAGTTACCATC+AGG | 0.524848 | 5_3:+19398690 | None:intergenic |
| CTGCAAAGGAATCTGTCCTC+TGG | 0.524924 | 5_3:+19396208 | None:intergenic |
| AAAACAAACTCCTTCAAAAG+AGG | 0.528565 | 5_3:+19403222 | None:intergenic |
| ACCGGAGCTAGACCGTCAGC+TGG | 0.528990 | 5_3:+19398949 | None:intergenic |
| ATAGGTTGGCTGTTGTTTGG+GGG | 0.531375 | 5_3:-19402478 | Msa0803920:CDS |
| TGAGCATGTTTGATATAAGA+AGG | 0.536126 | 5_3:+19403487 | None:intergenic |
| GGAGAAGATTGTGGATAGGT+TGG | 0.537085 | 5_3:-19402492 | Msa0803920:CDS |
| TGCATGACTGCAATATAACT+TGG | 0.537134 | 5_3:+19400455 | None:intergenic |
| GCCGCCAGAACTTATCGTGC+TGG | 0.539991 | 5_3:-19396857 | Msa0803920:CDS |
| AGAACCTTTGGAGAAGATTG+TGG | 0.540574 | 5_3:-19402501 | Msa0803920:CDS |
| GAAGCTTCGTAAAGCTTCCT+GGG | 0.542327 | 5_3:-19400162 | Msa0803920:CDS |
| ATATATGACTGAAGCTGCAA+AGG | 0.543109 | 5_3:+19396194 | None:intergenic |
| TTGCACACCATGTGGGCCAC+AGG | 0.544073 | 5_3:+19398666 | None:intergenic |
| AGGAAAAGGAAGAAGACCAA+AGG | 0.546451 | 5_3:+19403337 | None:intergenic |
| TCTGTAGGAACGTGATTTGG+AGG | 0.549045 | 5_3:-19402564 | Msa0803920:intron |
| AGTCGTGTACTGTCGCCTGA+TGG | 0.549429 | 5_3:-19398705 | Msa0803920:CDS |
| GGAACCTTCGTGGCCTAAGT+TGG | 0.549948 | 5_3:-19402525 | Msa0803920:CDS |
| GGTTAGCATGGCAACCAAGA+TGG | 0.553217 | 5_3:-19400216 | Msa0803920:CDS |
| GGAGGAGCTTGAACGGAGTG+TGG | 0.554314 | 5_3:-19402546 | Msa0803920:CDS |
| CTGGTATTAGGGGAATAGAG+TGG | 0.554763 | 5_3:-19397135 | Msa0803920:CDS |
| CTGGTGTTGGTTCTCTCCCA+CGG | 0.555391 | 5_3:+19395088 | None:intergenic |
| CATTATCTTTCAGGTTAGCA+TGG | 0.555932 | 5_3:-19400228 | Msa0803920:intron |
| GTGATTTGGAGGAGCTTGAA+CGG | 0.556023 | 5_3:-19402553 | Msa0803920:CDS |
| TGGCACTCAAAGTCTTCGAC+AGG | 0.557047 | 5_3:-19396837 | Msa0803920:intron |
| AAGACCAAAGGGGACAAGGA+AGG | 0.557340 | 5_3:+19403349 | None:intergenic |
| AGACTTCCTCACGCAGAGAA+CGG | 0.558595 | 5_3:+19400420 | None:intergenic |
| TCTTATATCAAACATGCTCA+TGG | 0.559336 | 5_3:-19403484 | Msa0803920:CDS |
| CTTTGGAGAAGATTGTGGAT+AGG | 0.559597 | 5_3:-19402496 | Msa0803920:CDS |
| TTCATCCATAGGAGCTGGAA+AGG | 0.560102 | 5_3:-19400754 | Msa0803920:intron |
| TAGGTGTTTGTGCAATTCCG+TGG | 0.562292 | 5_3:-19395105 | Msa0803920:CDS |
| GTTAAGTTTCAGCTTAGACT+AGG | 0.564326 | 5_3:-19401928 | Msa0803920:CDS |
| ATCTCAATTCTCACCTCAAG+TGG | 0.569275 | 5_3:+19395302 | None:intergenic |
| AGACCAAAGGGGACAAGGAA+GGG | 0.570214 | 5_3:+19403350 | None:intergenic |
| AAGGTTGCCTGTGGCCCACA+TGG | 0.572152 | 5_3:-19398673 | Msa0803920:CDS |
| GAAGCGAAGCATGTGAGACC+GGG | 0.577608 | 5_3:-19403180 | Msa0803920:CDS |
| GTGAAGTGAATCAATGCAGA+AGG | 0.581186 | 5_3:+19403317 | None:intergenic |
| TGGGCCATGGGTAATTACAT+TGG | 0.581788 | 5_3:-19400483 | Msa0803920:CDS |
| AGAAACGGGACACAAGTTCA+GGG | 0.585165 | 5_3:-19395357 | Msa0803920:CDS |
| AGGTGGCAAGCCACCACTTG+AGG | 0.586218 | 5_3:-19395315 | Msa0803920:intron |
| CTTGGCTTGCTTCCTACTGG+AGG | 0.587354 | 5_3:+19398636 | None:intergenic |
| AATCTGTCCTCTGGCAATGG+AGG | 0.587690 | 5_3:+19396217 | None:intergenic |
| CACCGCTGAGAATGGGCCAT+GGG | 0.587887 | 5_3:-19400495 | Msa0803920:CDS |
| GTGTTTGATTGCACACCATG+TGG | 0.591264 | 5_3:+19398658 | None:intergenic |
| CAAGAAGTGCGTTTAAGAAG+AGG | 0.592964 | 5_3:+19403405 | None:intergenic |
| CTATCCACAATCTTCTCCAA+AGG | 0.594046 | 5_3:+19402497 | None:intergenic |
| CCATGGCCCATTCTCAGCGG+TGG | 0.595708 | 5_3:+19400496 | None:intergenic |
| ATCAAAATATGACATTAATG+AGG | 0.597730 | 5_3:-19399691 | Msa0803920:intron |
| ATTACAATAATACATAATTG+TGG | 0.599573 | 5_3:-19394978 | Msa0803920:three_prime_UTR |
| CATGCTTACTAGGGAAGATG+AGG | 0.600428 | 5_3:-19397167 | Msa0803920:CDS |
| ACTTCAACACATGCTTACTA+GGG | 0.601967 | 5_3:-19397176 | Msa0803920:CDS |
| GCACATCTTCAATGGCTGAA+CGG | 0.602014 | 5_3:+19402414 | None:intergenic |
| GCATCCAATGTAATTACCCA+TGG | 0.603781 | 5_3:+19400479 | None:intergenic |
| CCACCGCTGAGAATGGGCCA+TGG | 0.605460 | 5_3:-19400496 | Msa0803920:CDS |
| GGTCTAGTTGCTGGTATTAG+GGG | 0.609680 | 5_3:-19397145 | Msa0803920:CDS |
| TGGTATTAGGGGAATAGAGT+GGG | 0.609977 | 5_3:-19397134 | Msa0803920:CDS |
| TGCAGGATTGGATGATAACA+AGG | 0.611790 | 5_3:-19395614 | Msa0803920:intron |
| TCAATTCTCACCTCAAGTGG+TGG | 0.612691 | 5_3:+19395305 | None:intergenic |
| AGCTGGATACTATAGCTACA+AGG | 0.613270 | 5_3:-19395810 | Msa0803920:intron |
| ATTGAAATTGAGCCAGCTGA+CGG | 0.620834 | 5_3:-19398961 | Msa0803920:CDS |
| ATAGGCAACTGGACTGCCTG+AGG | 0.621371 | 5_3:+19398800 | None:intergenic |
| AAGAAGTGCGTTTAAGAAGA+GGG | 0.621610 | 5_3:+19403406 | None:intergenic |
| AAGCTGATGATTTGACACAT+TGG | 0.621920 | 5_3:-19399746 | Msa0803920:CDS |
| TCGCAACCGTTCTCTGCGTG+AGG | 0.623634 | 5_3:-19400426 | Msa0803920:CDS |
| CATCAGCTTCCAATGCACCC+TGG | 0.627389 | 5_3:+19399760 | None:intergenic |
| TCATACAAAATATGTTCCTG+GGG | 0.636482 | 5_3:-19396296 | Msa0803920:CDS |
| GATGCATTGCTCAGACACAA+TGG | 0.636669 | 5_3:-19395066 | Msa0803920:CDS |
| TAACTCATCAAGGTTGCCTG+TGG | 0.655153 | 5_3:-19398682 | Msa0803920:CDS |
| CAACTACAATAACTATGCAG+AGG | 0.660462 | 5_3:-19400300 | Msa0803920:intron |
| AGGTGTTTGTGCAATTCCGT+GGG | 0.660849 | 5_3:-19395104 | Msa0803920:CDS |
| GCCAGCACGATAAGTTCTGG+CGG | 0.666421 | 5_3:+19396856 | None:intergenic |
| TCTACCAACTTAGGCCACGA+AGG | 0.670141 | 5_3:+19402521 | None:intergenic |
| TATTTAACTCGAGCATCGAG+TGG | 0.674265 | 5_3:-19400389 | Msa0803920:CDS |
| AGTGATTCCTCCATTGCCAG+AGG | 0.676653 | 5_3:-19396224 | Msa0803920:CDS |
| CTTTGCAGACCAAATAAAGG+AGG | 0.678762 | 5_3:-19401378 | Msa0803920:intron |
| AGAGTGAGAATGTGAGTGTG+AGG | 0.679163 | 5_3:+19403454 | None:intergenic |
| ATGCTCGAGTTAAATATGCA+CGG | 0.684859 | 5_3:+19400396 | None:intergenic |
| GCTTCAACAACATCAAAAGG+AGG | 0.685808 | 5_3:+19403198 | None:intergenic |
| TGCAATCAAACACCTCCAGT+AGG | 0.695303 | 5_3:-19398648 | Msa0803920:CDS |
| TACCCATGGCCCATTCTCAG+CGG | 0.698386 | 5_3:+19400493 | None:intergenic |
| GAAAAGGAAGAAGACCAAAG+GGG | 0.709033 | 5_3:+19403339 | None:intergenic |
| ATGCTTACTAGGGAAGATGA+GGG | 0.715837 | 5_3:-19397166 | Msa0803920:CDS |
| TGTTTGATTGCACACCATGT+GGG | 0.716151 | 5_3:+19398659 | None:intergenic |
| AAGTTTAATGACATTCCGTG+AGG | 0.718648 | 5_3:-19398616 | Msa0803920:intron |
| GAAGCCGAACAAGTAAACGA+AGG | 0.720648 | 5_3:+19403282 | None:intergenic |
| CATACAAAATATGTTCCTGG+GGG | 0.748795 | 5_3:-19396295 | Msa0803920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTATTTTTTACTATTT+TGG | + | chr5_3:19398418-19398437 | None:intergenic | 10.0% |
| !! | GTATTAAATATTAAATTATG+TGG | + | chr5_3:19398872-19398891 | None:intergenic | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr5_3:19400348-19400367 | Msa0803920:CDS | 10.0% |
| !! | ATTAATAAGTTATACAAAAA+TGG | - | chr5_3:19400968-19400987 | Msa0803920:intron | 10.0% |
| !!! | TGAATTTTTAATGATTAATA+AGG | + | chr5_3:19401129-19401148 | None:intergenic | 10.0% |
| !!! | AATATAATGTTATTTTACAA+AGG | + | chr5_3:19401413-19401432 | None:intergenic | 10.0% |
| !! | TTCAAATAAAAATATAGAAA+AGG | + | chr5_3:19401617-19401636 | None:intergenic | 10.0% |
| !!! | TTTTTTTCAAAATAAAATTG+TGG | + | chr5_3:19403390-19403409 | None:intergenic | 10.0% |
| !! | ATAATAATGTGTTACAATTA+TGG | + | chr5_3:19396354-19396373 | None:intergenic | 15.0% |
| !!! | TGTATATGTATATATTGATT+TGG | - | chr5_3:19398370-19398389 | Msa0803920:intron | 15.0% |
| !! | AATACATAAGAGTAAAATAT+GGG | + | chr5_3:19399814-19399833 | None:intergenic | 15.0% |
| !! | AAATACATAAGAGTAAAATA+TGG | + | chr5_3:19399815-19399834 | None:intergenic | 15.0% |
| !! | TTAAAAGAAAAAAAAACGTT+GGG | + | chr5_3:19400029-19400048 | None:intergenic | 15.0% |
| !! | TTTAAAAGAAAAAAAAACGT+TGG | + | chr5_3:19400030-19400049 | None:intergenic | 15.0% |
| !! | AATTTATGTTGAAAATTATG+AGG | - | chr5_3:19400141-19400160 | Msa0803920:intron | 15.0% |
| !!! | TTTTGAAACAGTTTTTTTTT+TGG | - | chr5_3:19400453-19400472 | Msa0803920:CDS | 15.0% |
| !! | AACTAAAGTTATTAAGAAAT+AGG | + | chr5_3:19400789-19400808 | None:intergenic | 15.0% |
| !! | ATTTCTTAATAACTTTAGTT+TGG | - | chr5_3:19400789-19400808 | Msa0803920:intron | 15.0% |
| !!! | TTTCTTAATAACTTTAGTTT+GGG | - | chr5_3:19400790-19400809 | Msa0803920:intron | 15.0% |
| !!! | TTTATATTGTTACTTACTTA+TGG | + | chr5_3:19401336-19401355 | None:intergenic | 15.0% |
| !! | ACAAAGATATAAACTTTATA+TGG | + | chr5_3:19401360-19401379 | None:intergenic | 15.0% |
| !!! | TATTAACCAAAGTTATTTTT+TGG | + | chr5_3:19402320-19402339 | None:intergenic | 15.0% |
| !!! | TTTATAATTGTCGTTTTTTT+AGG | + | chr5_3:19402487-19402506 | None:intergenic | 15.0% |
| !! | AAATGACTATATATATCTTA+TGG | - | chr5_3:19402700-19402719 | Msa0803920:intron | 15.0% |
| !! | TCTTAGTAAATAAATACAAT+AGG | + | chr5_3:19402941-19402960 | None:intergenic | 15.0% |
| !! | ATTACAATAATACATAATTG+TGG | - | chr5_3:19403423-19403442 | Msa0803920:CDS | 15.0% |
| !!! | GGTATAAAGTTTAAAACTTT+TGG | - | chr5_3:19395268-19395287 | Msa0803920:intron | 20.0% |
| !!! | AAAACTTTTGGATTGTTTAT+TGG | - | chr5_3:19395280-19395299 | Msa0803920:intron | 20.0% |
| !!! | AAACTTTTGGATTGTTTATT+GGG | - | chr5_3:19395281-19395300 | Msa0803920:intron | 20.0% |
| !!! | TTTATTGGGTTTTGATTAAT+GGG | - | chr5_3:19395295-19395314 | Msa0803920:intron | 20.0% |
| !!! | TTTCAACTTTTGTTTTGTTT+TGG | - | chr5_3:19395381-19395400 | Msa0803920:intron | 20.0% |
| !!! | TGATTTTGTGTTTTGATTAA+TGG | - | chr5_3:19395490-19395509 | Msa0803920:intron | 20.0% |
| !!! | GATTTTGTGTTTTGATTAAT+GGG | - | chr5_3:19395491-19395510 | Msa0803920:intron | 20.0% |
| !!! | TCATTTTCTTAAACAAATAC+CGG | + | chr5_3:19395614-19395633 | None:intergenic | 20.0% |
| !!! | TTGATTTTGTGTTTCATTAA+TGG | - | chr5_3:19395734-19395753 | Msa0803920:intron | 20.0% |
| !!! | TGATTTTGTGTTTCATTAAT+GGG | - | chr5_3:19395735-19395754 | Msa0803920:intron | 20.0% |
| !!! | TGATTTTATGTTTTGACTAA+TGG | - | chr5_3:19395796-19395815 | Msa0803920:intron | 20.0% |
| !!! | GATTTTATGTTTTGACTAAT+GGG | - | chr5_3:19395797-19395816 | Msa0803920:intron | 20.0% |
| !!! | ATTTTATGTTTTGACTAATG+GGG | - | chr5_3:19395798-19395817 | Msa0803920:intron | 20.0% |
| !! | TTTAGTATTACTATGATGAT+TGG | - | chr5_3:19396097-19396116 | Msa0803920:intron | 20.0% |
| !! | CATGAAAATATCTTAAACAA+GGG | + | chr5_3:19396388-19396407 | None:intergenic | 20.0% |
| !!! | CTTGTTTAAGATATTTTCAT+GGG | - | chr5_3:19396387-19396406 | Msa0803920:intron | 20.0% |
| !! | TTGATATTTGACTGATAATA+TGG | - | chr5_3:19396860-19396879 | Msa0803920:CDS | 20.0% |
| !!! | TTTTAACAACTGAAAACAAA+TGG | - | chr5_3:19397116-19397135 | Msa0803920:CDS | 20.0% |
| !! | CTATATCCTATATCTATTTA+TGG | - | chr5_3:19397216-19397235 | Msa0803920:intron | 20.0% |
| !! | AAAGGTTATCAGAAAAATTT+GGG | - | chr5_3:19397665-19397684 | Msa0803920:intron | 20.0% |
| !! | TTAAGAACATAATTCTATGT+AGG | - | chr5_3:19398140-19398159 | Msa0803920:intron | 20.0% |
| !!! | TTTTTTCAATTAGCTAGTAT+GGG | - | chr5_3:19398335-19398354 | Msa0803920:intron | 20.0% |
| !! | TTTATTAGATGTTGGAAATT+TGG | + | chr5_3:19398457-19398476 | None:intergenic | 20.0% |
| !! | ATCAAAATATGACATTAATG+AGG | - | chr5_3:19398710-19398729 | Msa0803920:CDS | 20.0% |
| !! | AGAAATAAATTAAGCATATC+TGG | - | chr5_3:19398826-19398845 | Msa0803920:CDS | 20.0% |
| !! | TTTGTAATTGCATAAGATAA+AGG | - | chr5_3:19399008-19399027 | Msa0803920:CDS | 20.0% |
| !! | TTAGATAAATTTGGAGAAAA+AGG | + | chr5_3:19399096-19399115 | None:intergenic | 20.0% |
| !! | TCCAAATTTATCTAACTAAT+GGG | - | chr5_3:19399101-19399120 | Msa0803920:intron | 20.0% |
| !! | AAGGTAATAAAATCTTGTAT+TGG | + | chr5_3:19399268-19399287 | None:intergenic | 20.0% |
| !!! | TATTACCTTTAACAATGTTT+TGG | - | chr5_3:19399279-19399298 | Msa0803920:intron | 20.0% |
| !!! | ACAAATGATTATTGTTATTC+AGG | - | chr5_3:19399539-19399558 | Msa0803920:intron | 20.0% |
| !!! | TATTTAAGTTATCTTTGACA+TGG | + | chr5_3:19399961-19399980 | None:intergenic | 20.0% |
| !! | TAAAAGAAAAAAAAACGTTG+GGG | + | chr5_3:19400028-19400047 | None:intergenic | 20.0% |
| !!! | TTAGACCAAAAATTTAAGTT+CGG | + | chr5_3:19400064-19400083 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr5_3:19400411-19400430 | Msa0803920:CDS | 20.0% |
| !! | GTATAAAACAAGTGATAATT+TGG | + | chr5_3:19401008-19401027 | None:intergenic | 20.0% |
| !! | TTTATACTAGTAAACTTTCA+AGG | - | chr5_3:19401021-19401040 | Msa0803920:intron | 20.0% |
| !!! | ATATGAAAGATTAGTTTAAC+AGG | + | chr5_3:19401063-19401082 | None:intergenic | 20.0% |
| !! | TTGATTTAGAAAGACTTTAA+TGG | - | chr5_3:19401459-19401478 | Msa0803920:intron | 20.0% |
| !! | TGATTTAGAAAGACTTTAAT+GGG | - | chr5_3:19401460-19401479 | Msa0803920:intron | 20.0% |
| !!! | ATTATTTTACTCTTTGCTAA+TGG | - | chr5_3:19401648-19401667 | Msa0803920:intron | 20.0% |
| !!! | ATAACTATTCTTTTTTCTTG+TGG | - | chr5_3:19401737-19401756 | Msa0803920:intron | 20.0% |
| !! | GGTATAAAAATGTAAAAGAT+TGG | + | chr5_3:19401813-19401832 | None:intergenic | 20.0% |
| !!! | TGTTTTAAAGCAAAAGAAAA+TGG | + | chr5_3:19401834-19401853 | None:intergenic | 20.0% |
| !! | ACTTTGATTGTAATCTATAT+TGG | - | chr5_3:19402047-19402066 | Msa0803920:intron | 20.0% |
| !! | TAATGAGTGAATAAAAAGTA+AGG | + | chr5_3:19402361-19402380 | None:intergenic | 20.0% |
| !!! | TAAAATAGTTGATAAAGACA+AGG | - | chr5_3:19402390-19402409 | Msa0803920:intron | 20.0% |
| !!! | CTCATTTTATTTCATTTTTC+TGG | - | chr5_3:19402542-19402561 | Msa0803920:CDS | 20.0% |
| !!! | TTGTATTGCTTTGATAATTA+TGG | - | chr5_3:19402620-19402639 | Msa0803920:intron | 20.0% |
| !! | TTGTATATTTACATTTACAC+AGG | - | chr5_3:19403014-19403033 | Msa0803920:intron | 20.0% |
| !!! | GTTTATTGGGTTTTGATTAA+TGG | - | chr5_3:19395294-19395313 | Msa0803920:intron | 25.0% |
| !!! | TTTTGTTTTGGATTGTTTAC+TGG | - | chr5_3:19395393-19395412 | Msa0803920:intron | 25.0% |
| !!! | TTTGTTTTGGATTGTTTACT+GGG | - | chr5_3:19395394-19395413 | Msa0803920:intron | 25.0% |
| !! | TTTGATTAATGGCTTTTGAT+TGG | - | chr5_3:19395418-19395437 | Msa0803920:intron | 25.0% |
| !!! | TGATTTTGTGTTTTGATTAG+TGG | - | chr5_3:19395521-19395540 | Msa0803920:intron | 25.0% |
| !!! | GATTTTGTGTTTTGATTAGT+GGG | - | chr5_3:19395522-19395541 | Msa0803920:intron | 25.0% |
| !!! | GGTTTTGTATTTAGCTTAAT+TGG | - | chr5_3:19395766-19395785 | Msa0803920:intron | 25.0% |
| ! | TGAATTGCATGTTATCAAAT+AGG | - | chr5_3:19396152-19396171 | Msa0803920:intron | 25.0% |
| ! | GAATTGCATGTTATCAAATA+GGG | - | chr5_3:19396153-19396172 | Msa0803920:intron | 25.0% |
| ! | AATTGACAATACTGATGATT+TGG | - | chr5_3:19396289-19396308 | Msa0803920:CDS | 25.0% |
| ! | CCATGAAAATATCTTAAACA+AGG | + | chr5_3:19396389-19396408 | None:intergenic | 25.0% |
| !!! | CCTTGTTTAAGATATTTTCA+TGG | - | chr5_3:19396386-19396405 | Msa0803920:intron | 25.0% |
| !!! | GTATTTTATTTCTCCTGTAT+TGG | - | chr5_3:19396633-19396652 | Msa0803920:intron | 25.0% |
| ! | ATAAAATAACATGCCAATAC+AGG | + | chr5_3:19396649-19396668 | None:intergenic | 25.0% |
| ! | TAGATTTATAACAGGTAAGA+TGG | - | chr5_3:19396724-19396743 | Msa0803920:intron | 25.0% |
| ! | TTAGAGTAATTCATTGTCTT+TGG | - | chr5_3:19396955-19396974 | Msa0803920:intron | 25.0% |
| ! | ACAGTTTAACAAAATTGAAC+AGG | - | chr5_3:19397086-19397105 | Msa0803920:CDS | 25.0% |
| ! | TTGCTTCCATAAATAGATAT+AGG | + | chr5_3:19397225-19397244 | None:intergenic | 25.0% |
| ! | TTGTCCTATTTATTTGTAAG+CGG | + | chr5_3:19397327-19397346 | None:intergenic | 25.0% |
| ! | GAAAGGTTATCAGAAAAATT+TGG | - | chr5_3:19397664-19397683 | Msa0803920:intron | 25.0% |
| ! | AAGGTTATCAGAAAAATTTG+GGG | - | chr5_3:19397666-19397685 | Msa0803920:intron | 25.0% |
| !! | AATGAGCTTTTCAAACTTTT+TGG | + | chr5_3:19397710-19397729 | None:intergenic | 25.0% |
| !!! | GTTTTTTCAATTAGCTAGTA+TGG | - | chr5_3:19398334-19398353 | Msa0803920:intron | 25.0% |
| !!! | TTTTTCAATTAGCTAGTATG+GGG | - | chr5_3:19398336-19398355 | Msa0803920:intron | 25.0% |
| ! | ATGTCTGATTTATTAGATGT+TGG | + | chr5_3:19398465-19398484 | None:intergenic | 25.0% |
| !! | GGTCTTTAGAAAATTTCTTA+AGG | + | chr5_3:19398623-19398642 | None:intergenic | 25.0% |
| !!! | TAAGAAATTTTCTAAAGACC+AGG | - | chr5_3:19398623-19398642 | Msa0803920:CDS | 25.0% |
| !!! | AAGAAATTTTCTAAAGACCA+GGG | - | chr5_3:19398624-19398643 | Msa0803920:CDS | 25.0% |
| !! | AAAGACACTTTAAGAACATA+AGG | - | chr5_3:19398770-19398789 | Msa0803920:CDS | 25.0% |
| !!! | ACTTTAAGAACATAAGGTTT+TGG | - | chr5_3:19398776-19398795 | Msa0803920:CDS | 25.0% |
| !! | CAATATTTTATACAGCTTGA+AGG | - | chr5_3:19398922-19398941 | Msa0803920:intron | 25.0% |
| ! | TTTGAAAAACTGTTATGTCA+AGG | - | chr5_3:19398950-19398969 | Msa0803920:intron | 25.0% |
| ! | CTCCAAATTTATCTAACTAA+TGG | - | chr5_3:19399100-19399119 | Msa0803920:intron | 25.0% |
| ! | TCCCATTAGTTAGATAAATT+TGG | + | chr5_3:19399105-19399124 | None:intergenic | 25.0% |
| ! | AAAACCATATACTATAACTG+GGG | + | chr5_3:19399211-19399230 | None:intergenic | 25.0% |
| ! | GAAAACCATATACTATAACT+GGG | + | chr5_3:19399212-19399231 | None:intergenic | 25.0% |
| ! | AGAAAACCATATACTATAAC+TGG | + | chr5_3:19399213-19399232 | None:intergenic | 25.0% |
| !!! | TCTTGTATTGGTTAGTAAAT+TGG | + | chr5_3:19399256-19399275 | None:intergenic | 25.0% |
| ! | AAAGACCAAAACATTGTTAA+AGG | + | chr5_3:19399287-19399306 | None:intergenic | 25.0% |
| !! | TGATTATTGTTATTCAGGTT+TGG | - | chr5_3:19399544-19399563 | Msa0803920:intron | 25.0% |
| ! | TCAAAATAAAAATAGGCAAC+TGG | + | chr5_3:19399615-19399634 | None:intergenic | 25.0% |
| ! | GTAGGGATCAAAATAAAAAT+AGG | + | chr5_3:19399622-19399641 | None:intergenic | 25.0% |
| ! | TTAATTAAAGTGGCACTAAT+GGG | + | chr5_3:19399989-19400008 | None:intergenic | 25.0% |
| ! | ATTAATTAAAGTGGCACTAA+TGG | + | chr5_3:19399990-19400009 | None:intergenic | 25.0% |
| !! | TTACAGTTAGCTGTATTTTA+TGG | - | chr5_3:19400115-19400134 | Msa0803920:intron | 25.0% |
| ! | TTAGATAACAGAAAAGTAAC+AGG | - | chr5_3:19400165-19400184 | Msa0803920:CDS | 25.0% |
| ! | AAGAATAAGGACTTTGAATA+TGG | - | chr5_3:19400188-19400207 | Msa0803920:CDS | 25.0% |
| !!! | AAACGACATTCATTTTGAAA+CGG | + | chr5_3:19400232-19400251 | None:intergenic | 25.0% |
| !! | TTCAAAATGAATGTCGTTTA+AGG | - | chr5_3:19400233-19400252 | Msa0803920:intron | 25.0% |
| ! | GCATTAATTAAAAGAAAGAG+AGG | - | chr5_3:19400279-19400298 | Msa0803920:intron | 25.0% |
| ! | AATAGTTGATTGGGATAATT+TGG | + | chr5_3:19400315-19400334 | None:intergenic | 25.0% |
| ! | AAATTATCCCAATCAACTAT+TGG | - | chr5_3:19400314-19400333 | Msa0803920:CDS | 25.0% |
| ! | AAACAAACCAATAGTTGATT+GGG | + | chr5_3:19400324-19400343 | None:intergenic | 25.0% |
| ! | AAAACAAACCAATAGTTGAT+TGG | + | chr5_3:19400325-19400344 | None:intergenic | 25.0% |
| ! | GTTAAAGATTTAAACCTGAA+TGG | - | chr5_3:19400871-19400890 | Msa0803920:intron | 25.0% |
| ! | AATATTGATATGTACCATTC+AGG | + | chr5_3:19400888-19400907 | None:intergenic | 25.0% |
| ! | GTTTATATCTTTGTCTTGAA+TGG | - | chr5_3:19401366-19401385 | Msa0803920:CDS | 25.0% |
| !!! | ATTGCAAAACATTTTGAAAC+TGG | - | chr5_3:19401484-19401503 | Msa0803920:intron | 25.0% |
| !!! | TTGCAAAACATTTTGAAACT+GGG | - | chr5_3:19401485-19401504 | Msa0803920:intron | 25.0% |
| !!! | TTTCTTTTGCTTTAAAACAG+TGG | - | chr5_3:19401835-19401854 | Msa0803920:intron | 25.0% |
| ! | AACAGACACAATAGAAAAAA+AGG | + | chr5_3:19401895-19401914 | None:intergenic | 25.0% |
| ! | TTCATACAAAATATGTTCCT+GGG | - | chr5_3:19402104-19402123 | Msa0803920:intron | 25.0% |
| ! | CACAAACCAAAAAATAACTT+TGG | - | chr5_3:19402311-19402330 | Msa0803920:intron | 25.0% |
| !!! | TGGTTACGTTAACTATTTTT+TGG | + | chr5_3:19402425-19402444 | None:intergenic | 25.0% |
| !!! | CGTTTTGTTTCATATATTGA+AGG | - | chr5_3:19402644-19402663 | Msa0803920:intron | 25.0% |
| ! | ATTAAGAAAAACTGTCGATA+AGG | - | chr5_3:19402821-19402840 | Msa0803920:intron | 25.0% |
| !!! | GCATGTTTTTAGAAAAATAG+AGG | + | chr5_3:19402894-19402913 | None:intergenic | 25.0% |
| ! | ATACATAATTGTGGTTGTTA+AGG | - | chr5_3:19403432-19403451 | Msa0803920:CDS | 25.0% |
| TGAGCATGTTTGATATAAGA+AGG | + | chr5_3:19394917-19394936 | None:intergenic | 30.0% | |
| TCTTATATCAAACATGCTCA+TGG | - | chr5_3:19394917-19394936 | Msa0803920:three_prime_UTR | 30.0% | |
| AAAACAAACTCCTTCAAAAG+AGG | + | chr5_3:19395182-19395201 | None:intergenic | 30.0% | |
| !! | TTTGATTAATGGGTGTTGAT+TGG | - | chr5_3:19395305-19395324 | Msa0803920:intron | 30.0% |
| !!! | TGTTGATTGGTTTTGTGTTT+TGG | - | chr5_3:19395318-19395337 | Msa0803920:CDS | 30.0% |
| !!! | TGGTTTTGTGTTTTGGTTAA+TGG | - | chr5_3:19395325-19395344 | Msa0803920:CDS | 30.0% |
| !!! | GGTTTTGTGTTTTGGTTAAT+GGG | - | chr5_3:19395326-19395345 | Msa0803920:CDS | 30.0% |
| !!! | TTTCGATTGGTTTTGTGTTT+GGG | - | chr5_3:19395349-19395368 | Msa0803920:CDS | 30.0% |
| !!! | GTTTACTGGGTTTTGATTAA+TGG | - | chr5_3:19395407-19395426 | Msa0803920:intron | 30.0% |
| !!! | GATTGGTTTTGTGTTTTGAT+TGG | - | chr5_3:19395435-19395454 | Msa0803920:intron | 30.0% |
| !!! | GATTTTGTGTTTTGGTTTGT+GGG | - | chr5_3:19395460-19395479 | Msa0803920:intron | 30.0% |
| !!! | GTGTTTTGATTAATGGGTAT+TGG | - | chr5_3:19395497-19395516 | Msa0803920:intron | 30.0% |
| ! | ATGCATTCAATCAAAAGTGT+CGG | - | chr5_3:19395694-19395713 | Msa0803920:intron | 30.0% |
| ! | TTTCATTAATGGGTCTTGAT+TGG | - | chr5_3:19395745-19395764 | Msa0803920:intron | 30.0% |
| TAATCATCTCAAAGCTGTTA+AGG | - | chr5_3:19395951-19395970 | Msa0803920:intron | 30.0% | |
| !!! | GGTACTTTTGGTTTTTGTTT+TGG | - | chr5_3:19396011-19396030 | Msa0803920:intron | 30.0% |
| ATGTGTAATTGTGCATTTCT+CGG | - | chr5_3:19396044-19396063 | Msa0803920:intron | 30.0% | |
| !! | ATACTGATGATTTGGTTTGT+TGG | - | chr5_3:19396297-19396316 | Msa0803920:CDS | 30.0% |
| GTCATCATATGCTAAAATTG+AGG | + | chr5_3:19396323-19396342 | None:intergenic | 30.0% | |
| !! | GTTTAAGATATTTTCATGGG+TGG | - | chr5_3:19396390-19396409 | Msa0803920:intron | 30.0% |
| !! | ATTGCTGTAATTTTGTTTGC+AGG | - | chr5_3:19396442-19396461 | Msa0803920:intron | 30.0% |
| TCAGCTTCTAGATTTATAAC+AGG | - | chr5_3:19396716-19396735 | Msa0803920:intron | 30.0% | |
| TGGAGAATTGTGAAAAATGA+TGG | - | chr5_3:19396744-19396763 | Msa0803920:intron | 30.0% | |
| !! | AAAAATGATGGATGTGTAGT+TGG | - | chr5_3:19396756-19396775 | Msa0803920:intron | 30.0% |
| ! | GTGTGAAGTTTTCTGATTTA+CGG | - | chr5_3:19396778-19396797 | Msa0803920:intron | 30.0% |
| TTAAATTTCCGCTTCATTGT+CGG | - | chr5_3:19396814-19396833 | Msa0803920:intron | 30.0% | |
| ATCAGTCAAATATCAACAAG+TGG | + | chr5_3:19396856-19396875 | None:intergenic | 30.0% | |
| ! | TGAATTACTCTAAGAACAAG+TGG | + | chr5_3:19396948-19396967 | None:intergenic | 30.0% |
| CTGAAAACAAATGGAAATTG+TGG | - | chr5_3:19397125-19397144 | Msa0803920:CDS | 30.0% | |
| !!! | TTCCCATTTTTTCACCATTT+AGG | - | chr5_3:19397171-19397190 | Msa0803920:CDS | 30.0% |
| !!! | TCCCATTTTTTCACCATTTA+GGG | - | chr5_3:19397172-19397191 | Msa0803920:CDS | 30.0% |
| ACCCTAAATGGTGAAAAAAT+GGG | + | chr5_3:19397176-19397195 | None:intergenic | 30.0% | |
| TAGTACATAATCACCCTAAA+TGG | + | chr5_3:19397188-19397207 | None:intergenic | 30.0% | |
| ! | ATTTAGGGTGATTATGTACT+AGG | - | chr5_3:19397187-19397206 | Msa0803920:CDS | 30.0% |
| ! | AATGCCGCTTACAAATAAAT+AGG | - | chr5_3:19397320-19397339 | Msa0803920:intron | 30.0% |
| ! | GAGATTTTCAAAAATCCCAA+AGG | - | chr5_3:19397387-19397406 | Msa0803920:intron | 30.0% |
| ACATATACTGCCAATGAAAT+TGG | + | chr5_3:19397439-19397458 | None:intergenic | 30.0% | |
| ! | TCACTACATTTGGTTTAACT+GGG | + | chr5_3:19397492-19397511 | None:intergenic | 30.0% |
| CAAAATCTTGTCACTACATT+TGG | + | chr5_3:19397502-19397521 | None:intergenic | 30.0% | |
| AAAGCTCATTACAGATAAGA+AGG | - | chr5_3:19397720-19397739 | Msa0803920:intron | 30.0% | |
| ! | TTTGAGTTCTGATTACTTGA+TGG | - | chr5_3:19397857-19397876 | Msa0803920:intron | 30.0% |
| TACTTGATGGAAAAAAATGC+AGG | - | chr5_3:19397870-19397889 | Msa0803920:intron | 30.0% | |
| ACTTGATGGAAAAAAATGCA+GGG | - | chr5_3:19397871-19397890 | Msa0803920:intron | 30.0% | |
| AATTCTATGTAGGTTACTGA+TGG | - | chr5_3:19398150-19398169 | Msa0803920:intron | 30.0% | |
| TGTTTGCTTCATGATTTGAA+TGG | - | chr5_3:19398304-19398323 | Msa0803920:intron | 30.0% | |
| GTTTGCTTCATGATTTGAAT+GGG | - | chr5_3:19398305-19398324 | Msa0803920:intron | 30.0% | |
| TGGAATAGTAGATGACAATA+AGG | + | chr5_3:19398398-19398417 | None:intergenic | 30.0% | |
| AATTAAGCATATCTGGAAGA+AGG | - | chr5_3:19398833-19398852 | Msa0803920:CDS | 30.0% | |
| CAAATGCAGGAACAAAATAA+CGG | + | chr5_3:19399051-19399070 | None:intergenic | 30.0% | |
| TGGCAAAAATATTCAAATGC+AGG | + | chr5_3:19399064-19399083 | None:intergenic | 30.0% | |
| GGATATCCATCTTAGTTAAA+GGG | - | chr5_3:19399122-19399141 | Msa0803920:intron | 30.0% | |
| AAGTACAGTGAACAGAATTA+TGG | + | chr5_3:19399154-19399173 | None:intergenic | 30.0% | |
| AAACCATATACTATAACTGG+GGG | + | chr5_3:19399210-19399229 | None:intergenic | 30.0% | |
| TGGTTAGTAAATTGGTCAAT+GGG | + | chr5_3:19399248-19399267 | None:intergenic | 30.0% | |
| TTGGTTAGTAAATTGGTCAA+TGG | + | chr5_3:19399249-19399268 | None:intergenic | 30.0% | |
| ! | TTGTAACTTTTAATCTGCCT+TGG | - | chr5_3:19399310-19399329 | Msa0803920:intron | 30.0% |
| CATTTGGCAGAGAAAAAAAT+GGG | + | chr5_3:19399379-19399398 | None:intergenic | 30.0% | |
| ACATTTGGCAGAGAAAAAAA+TGG | + | chr5_3:19399380-19399399 | None:intergenic | 30.0% | |
| ! | TTTTTCTCTGCCAAATGTTA+TGG | - | chr5_3:19399382-19399401 | Msa0803920:intron | 30.0% |
| ATAAAAGGGAGTCTAATTAC+CGG | + | chr5_3:19399473-19399492 | None:intergenic | 30.0% | |
| AGAACCACAGATGAATAAAA+GGG | + | chr5_3:19399487-19399506 | None:intergenic | 30.0% | |
| AAGAACCACAGATGAATAAA+AGG | + | chr5_3:19399488-19399507 | None:intergenic | 30.0% | |
| TGTACGAAAAAAAAGTTGTC+TGG | - | chr5_3:19399868-19399887 | Msa0803920:intron | 30.0% | |
| GTACGAAAAAAAAGTTGTCT+GGG | - | chr5_3:19399869-19399888 | Msa0803920:intron | 30.0% | |
| TAATTGCTTCTACCATTATC+TGG | - | chr5_3:19399910-19399929 | Msa0803920:intron | 30.0% | |
| GAAAAGTAACAGGAAGAATA+AGG | - | chr5_3:19400175-19400194 | Msa0803920:CDS | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+TGG | - | chr5_3:19400479-19400498 | Msa0803920:CDS | 30.0% |
| ! | CTTTGATCTTTTGTTCTTGA+TGG | + | chr5_3:19400575-19400594 | None:intergenic | 30.0% |
| TATAATATCACACCATCATC+AGG | + | chr5_3:19400706-19400725 | None:intergenic | 30.0% | |
| TTCACACTTCAATTGAAAAC+AGG | + | chr5_3:19400842-19400861 | None:intergenic | 30.0% | |
| TGAATTACCTTCTCAGTTTA+TGG | - | chr5_3:19401297-19401316 | Msa0803920:intron | 30.0% | |
| !!! | TGCAAAACATTTTGAAACTG+GGG | - | chr5_3:19401486-19401505 | Msa0803920:intron | 30.0% |
| !! | ATTCCAGAAATCTGTTTTGA+AGG | + | chr5_3:19401707-19401726 | None:intergenic | 30.0% |
| CTTCATACAAAATATGTTCC+TGG | - | chr5_3:19402103-19402122 | Msa0803920:intron | 30.0% | |
| TCATACAAAATATGTTCCTG+GGG | - | chr5_3:19402105-19402124 | Msa0803920:intron | 30.0% | |
| ATCTTAAAAGCCATGTACAA+TGG | + | chr5_3:19402284-19402303 | None:intergenic | 30.0% | |
| !! | TTAGTCGTTTTCAAAACAGA+TGG | + | chr5_3:19402445-19402464 | None:intergenic | 30.0% |
| ! | TTCTGGATTTTGCATTTGTT+AGG | - | chr5_3:19402559-19402578 | Msa0803920:CDS | 30.0% |
| !! | AGGATTTTGCTTTTCTCTTT+AGG | - | chr5_3:19402841-19402860 | Msa0803920:intron | 30.0% |
| !! | GGATTTTGCTTTTCTCTTTA+GGG | - | chr5_3:19402842-19402861 | Msa0803920:intron | 30.0% |
| !!! | CTAGGATTTTTTACCAACTT+TGG | - | chr5_3:19403231-19403250 | Msa0803920:CDS | 30.0% |
| CTTGAACATTTAATGCAATG+TGG | - | chr5_3:19403263-19403282 | Msa0803920:CDS | 30.0% | |
| !!! | GCAATGTGGTTTTTTTATGT+AGG | - | chr5_3:19403277-19403296 | Msa0803920:CDS | 30.0% |
| ! | AAGAAGTGCGTTTAAGAAGA+GGG | + | chr5_3:19394998-19395017 | None:intergenic | 35.0% |
| AGAATGCTTAGGGTTGAAAA+AGG | + | chr5_3:19395024-19395043 | None:intergenic | 35.0% | |
| GGGATTTATGAGAATGCTTA+GGG | + | chr5_3:19395034-19395053 | None:intergenic | 35.0% | |
| AGGGATTTATGAGAATGCTT+AGG | + | chr5_3:19395035-19395054 | None:intergenic | 35.0% | |
| TGAATCAATGCAGAAGGAAA+AGG | + | chr5_3:19395081-19395100 | None:intergenic | 35.0% | |
| TTCACCTTCGTTTACTTGTT+CGG | - | chr5_3:19395115-19395134 | Msa0803920:intron | 35.0% | |
| ! | TGAAGCTAATCCTCTTTTGA+AGG | - | chr5_3:19395169-19395188 | Msa0803920:intron | 35.0% |
| TTCGCTTCAACAACATCAAA+AGG | + | chr5_3:19395209-19395228 | None:intergenic | 35.0% | |
| !! | TTTGGTTAATGGGTTTCGAT+TGG | - | chr5_3:19395336-19395355 | Msa0803920:CDS | 35.0% |
| !!! | GTTTCGATTGGTTTTGTGTT+TGG | - | chr5_3:19395348-19395367 | Msa0803920:CDS | 35.0% |
| !!! | TTCGATTGGTTTTGTGTTTG+GGG | - | chr5_3:19395350-19395369 | Msa0803920:CDS | 35.0% |
| !!! | TGGTTTTGTGTTTTGATTGG+TGG | - | chr5_3:19395438-19395457 | Msa0803920:intron | 35.0% |
| !!! | GATTGGTGGATTTTGTGTTT+TGG | - | chr5_3:19395452-19395471 | Msa0803920:intron | 35.0% |
| !!! | GGATTTTGTGTTTTGGTTTG+TGG | - | chr5_3:19395459-19395478 | Msa0803920:intron | 35.0% |
| CTGAATGTAATCACATGTGT+CGG | - | chr5_3:19395639-19395658 | Msa0803920:CDS | 35.0% | |
| !! | CTTTTGATTGAATGCATGTC+CGG | + | chr5_3:19395691-19395710 | None:intergenic | 35.0% |
| ! | TATGATGATTGGTTGTGCTT+TGG | - | chr5_3:19396108-19396127 | Msa0803920:intron | 35.0% |
| ! | ATGATGATTGGTTGTGCTTT+GGG | - | chr5_3:19396109-19396128 | Msa0803920:intron | 35.0% |
| TGTGTATCATGAAACAATCG+TGG | + | chr5_3:19396212-19396231 | None:intergenic | 35.0% | |
| GTTAAGTTTCAGCTTAGACT+AGG | - | chr5_3:19396473-19396492 | Msa0803920:intron | 35.0% | |
| ! | GCTTTGAACGCATTATAAAG+AGG | + | chr5_3:19396509-19396528 | None:intergenic | 35.0% |
| GCGGAAATTTAACAAAAGAG+TGG | + | chr5_3:19396806-19396825 | None:intergenic | 35.0% | |
| TGAAAGAACAGGCTGTTATT+GGG | + | chr5_3:19396917-19396936 | None:intergenic | 35.0% | |
| ! | TTACTCTAAGAACAAGTGGA+AGG | + | chr5_3:19396944-19396963 | None:intergenic | 35.0% |
| TACCTTTGCAGACCAAATAA+AGG | - | chr5_3:19397020-19397039 | Msa0803920:intron | 35.0% | |
| TAAGAACTGCCTCCTTTATT+TGG | + | chr5_3:19397035-19397054 | None:intergenic | 35.0% | |
| ATAAAGGAGGCAGTTCTTAA+TGG | - | chr5_3:19397036-19397055 | Msa0803920:intron | 35.0% | |
| CACCCTAAATGGTGAAAAAA+TGG | + | chr5_3:19397177-19397196 | None:intergenic | 35.0% | |
| AGCAACATGAACTGGTAATA+TGG | - | chr5_3:19397346-19397365 | Msa0803920:intron | 35.0% | |
| GCCTGAAATTCCAATTTCAT+TGG | - | chr5_3:19397426-19397445 | Msa0803920:intron | 35.0% | |
| GCCAATGAAATTGGAATTTC+AGG | + | chr5_3:19397430-19397449 | None:intergenic | 35.0% | |
| ! | GTCACTACATTTGGTTTAAC+TGG | + | chr5_3:19397493-19397512 | None:intergenic | 35.0% |
| GTGTGTGTGTAATATTGTCA+TGG | - | chr5_3:19397623-19397642 | Msa0803920:intron | 35.0% | |
| ATTGTCATGGTTTCATCCAT+AGG | - | chr5_3:19397636-19397655 | Msa0803920:intron | 35.0% | |
| ACAGATAAGAAGGAGATTGA+AGG | - | chr5_3:19397730-19397749 | Msa0803920:intron | 35.0% | |
| CTTGATGGAAAAAAATGCAG+GGG | - | chr5_3:19397872-19397891 | Msa0803920:intron | 35.0% | |
| TGCATGACTGCAATATAACT+TGG | + | chr5_3:19397949-19397968 | None:intergenic | 35.0% | |
| ATGCTCGAGTTAAATATGCA+CGG | + | chr5_3:19398008-19398027 | None:intergenic | 35.0% | |
| !!! | TCGAGCAAATTTTAAAGCTG+AGG | - | chr5_3:19398058-19398077 | Msa0803920:intron | 35.0% |
| !!! | GCAAATTTTAAAGCTGAGGT+TGG | - | chr5_3:19398062-19398081 | Msa0803920:intron | 35.0% |
| ! | TTTAAAGCTGAGGTTGGAAA+AGG | - | chr5_3:19398068-19398087 | Msa0803920:intron | 35.0% |
| GTTATTGTAGTTGAGAAGCT+TGG | + | chr5_3:19398094-19398113 | None:intergenic | 35.0% | |
| CAACTACAATAACTATGCAG+AGG | - | chr5_3:19398101-19398120 | Msa0803920:intron | 35.0% | |
| TACTGATGGCATTATCTTTC+AGG | - | chr5_3:19398164-19398183 | Msa0803920:intron | 35.0% | |
| !! | CATTATCTTTCAGGTTAGCA+TGG | - | chr5_3:19398173-19398192 | Msa0803920:intron | 35.0% |
| TTTATCAACAGTTGCCATCT+TGG | + | chr5_3:19398202-19398221 | None:intergenic | 35.0% | |
| ATATCTGCAAGGAAGAAAGA+TGG | + | chr5_3:19398594-19398613 | None:intergenic | 35.0% | |
| ATCTTTCTTCCTTGCAGATA+TGG | - | chr5_3:19398593-19398612 | Msa0803920:intron | 35.0% | |
| AAGCTGATGATTTGACACAT+TGG | - | chr5_3:19398655-19398674 | Msa0803920:CDS | 35.0% | |
| AGCTGATGATTTGACACATT+GGG | - | chr5_3:19398656-19398675 | Msa0803920:CDS | 35.0% | |
| GGGATATCCATCTTAGTTAA+AGG | - | chr5_3:19399121-19399140 | Msa0803920:intron | 35.0% | |
| AGCTTTCCCTTTAACTAAGA+TGG | + | chr5_3:19399131-19399150 | None:intergenic | 35.0% | |
| AACCATATACTATAACTGGG+GGG | + | chr5_3:19399209-19399228 | None:intergenic | 35.0% | |
| GGTTAGTAAATTGGTCAATG+GGG | + | chr5_3:19399247-19399266 | None:intergenic | 35.0% | |
| !!! | CATCTGCTATTTTGTCTCAT+AGG | - | chr5_3:19399343-19399362 | Msa0803920:intron | 35.0% |
| AAGAGTCCATCCATAACATT+TGG | + | chr5_3:19399395-19399414 | None:intergenic | 35.0% | |
| ! | GACCTTGCAAAAACACTTTT+TGG | - | chr5_3:19399416-19399435 | Msa0803920:intron | 35.0% |
| !!! | TGCCAAAAAGTGTTTTTGCA+AGG | + | chr5_3:19399421-19399440 | None:intergenic | 35.0% |
| TCACGGAATGTCATTAAACT+TGG | + | chr5_3:19399786-19399805 | None:intergenic | 35.0% | |
| AAGTTTAATGACATTCCGTG+AGG | - | chr5_3:19399785-19399804 | Msa0803920:CDS | 35.0% | |
| ! | GTAAAATATGGGTTACCTCA+CGG | + | chr5_3:19399803-19399822 | None:intergenic | 35.0% |
| ATCATGTGAAGACCAGATAA+TGG | + | chr5_3:19399925-19399944 | None:intergenic | 35.0% | |
| AAAAAAAAACGTTGGGGAAG+TGG | + | chr5_3:19400022-19400041 | None:intergenic | 35.0% | |
| !!! | AGGTGCCGAACTTAAATTTT+TGG | - | chr5_3:19400056-19400075 | Msa0803920:intron | 35.0% |
| !!! | GACATTCATTTTGAAACGGA+GGG | + | chr5_3:19400228-19400247 | None:intergenic | 35.0% |
| AGAAATGCTTAACCACCAAA+AGG | - | chr5_3:19400529-19400548 | Msa0803920:intron | 35.0% | |
| !!! | CTTTGGTTGCTTTTTCCTTT+TGG | + | chr5_3:19400547-19400566 | None:intergenic | 35.0% |
| ! | TGTTCTTGATGGTTAAGCTT+TGG | + | chr5_3:19400564-19400583 | None:intergenic | 35.0% |
| AACTTTGCTTATGTCTTGAG+TGG | + | chr5_3:19400609-19400628 | None:intergenic | 35.0% | |
| ! | TTTGTCTTCTCCTTTTTCTC+AGG | - | chr5_3:19401171-19401190 | Msa0803920:intron | 35.0% |
| ACTTCAACACATGCTTACTA+GGG | - | chr5_3:19401225-19401244 | Msa0803920:intron | 35.0% | |
| ! | CAGTTTTCCATAAACTGAGA+AGG | + | chr5_3:19401307-19401326 | None:intergenic | 35.0% |
| CTTCTCAGTTTATGGAAAAC+TGG | - | chr5_3:19401305-19401324 | Msa0803920:intron | 35.0% | |
| TATCTTTGTCTTGAATGGAC+AGG | - | chr5_3:19401371-19401390 | Msa0803920:CDS | 35.0% | |
| ACAGGTCAGTATGAATGAAT+TGG | - | chr5_3:19401582-19401601 | Msa0803920:intron | 35.0% | |
| GTTCCTTCAAAACAGATTTC+TGG | - | chr5_3:19401701-19401720 | Msa0803920:intron | 35.0% | |
| TAAGCTTTCTGCATCAGTAT+TGG | - | chr5_3:19401773-19401792 | Msa0803920:intron | 35.0% | |
| !!! | TGCATCAGTATTGGTACTTT+TGG | - | chr5_3:19401782-19401801 | Msa0803920:intron | 35.0% |
| !!! | GCATCAGTATTGGTACTTTT+GGG | - | chr5_3:19401783-19401802 | Msa0803920:intron | 35.0% |
| TGATTCAAACCCATCTTTCT+TGG | - | chr5_3:19401994-19402013 | Msa0803920:intron | 35.0% | |
| GATTCAAACCCATCTTTCTT+GGG | - | chr5_3:19401995-19402014 | Msa0803920:intron | 35.0% | |
| TAACACAACCCAAGAAAGAT+GGG | + | chr5_3:19402006-19402025 | None:intergenic | 35.0% | |
| AAAATTTGCAACTGTCGATC+TGG | - | chr5_3:19402078-19402097 | Msa0803920:intron | 35.0% | |
| CATACAAAATATGTTCCTGG+GGG | - | chr5_3:19402106-19402125 | Msa0803920:intron | 35.0% | |
| ATATATGACTGAAGCTGCAA+AGG | + | chr5_3:19402210-19402229 | None:intergenic | 35.0% | |
| AGCTTCAGTCATATATTTGC+AGG | - | chr5_3:19402214-19402233 | Msa0803920:intron | 35.0% | |
| ! | AATCAACAAAGAGGTATAGG+AGG | + | chr5_3:19402249-19402268 | None:intergenic | 35.0% |
| ! | CGTAATCAACAAAGAGGTAT+AGG | + | chr5_3:19402252-19402271 | None:intergenic | 35.0% |
| !! | TGGATTTTGCATTTGTTAGG+TGG | - | chr5_3:19402562-19402581 | Msa0803920:intron | 35.0% |
| TGTCATATAGTCCACAGAAA+AGG | - | chr5_3:19402674-19402693 | Msa0803920:intron | 35.0% | |
| GTCATATAGTCCACAGAAAA+GGG | - | chr5_3:19402675-19402694 | Msa0803920:intron | 35.0% | |
| TCATATAGTCCACAGAAAAG+GGG | - | chr5_3:19402676-19402695 | Msa0803920:intron | 35.0% | |
| TGAATTTGTGTGTTATGCAG+TGG | - | chr5_3:19402723-19402742 | Msa0803920:intron | 35.0% | |
| GAATTTGTGTGTTATGCAGT+GGG | - | chr5_3:19402724-19402743 | Msa0803920:intron | 35.0% | |
| ! | CATATGCATGTGACAGATTT+TGG | + | chr5_3:19403203-19403222 | None:intergenic | 35.0% |
| AAATCTGTCACATGCATATG+TGG | - | chr5_3:19403203-19403222 | Msa0803920:CDS | 35.0% | |
| AATCTGTCACATGCATATGT+GGG | - | chr5_3:19403204-19403223 | Msa0803920:CDS | 35.0% | |
| !! | TTTTTACCAACTTTGGTGTG+TGG | - | chr5_3:19403238-19403257 | Msa0803920:CDS | 35.0% |
| ! | ATGAGACACGAAGCACTTAT+TGG | - | chr5_3:19394888-19394907 | Msa0803920:three_prime_UTR | 40.0% |
| ! | CAAGAAGTGCGTTTAAGAAG+AGG | + | chr5_3:19394999-19395018 | None:intergenic | 40.0% |
| GAAAAGGAAGAAGACCAAAG+GGG | + | chr5_3:19395065-19395084 | None:intergenic | 40.0% | |
| GGAAAAGGAAGAAGACCAAA+GGG | + | chr5_3:19395066-19395085 | None:intergenic | 40.0% | |
| AGGAAAAGGAAGAAGACCAA+AGG | + | chr5_3:19395067-19395086 | None:intergenic | 40.0% | |
| GTGAAGTGAATCAATGCAGA+AGG | + | chr5_3:19395087-19395106 | None:intergenic | 40.0% | |
| GCTTCAACAACATCAAAAGG+AGG | + | chr5_3:19395206-19395225 | None:intergenic | 40.0% | |
| TCGTGCTCTTCTTGAGAAAT+TGG | - | chr5_3:19395247-19395266 | Msa0803920:intron | 40.0% | |
| CATATTAGTGTCATGTCCGT+TGG | + | chr5_3:19395585-19395604 | None:intergenic | 40.0% | |
| ACGGACATGACACTAATATG+TGG | - | chr5_3:19395585-19395604 | Msa0803920:intron | 40.0% | |
| TGACACTAATATGTGGACAC+CGG | - | chr5_3:19395592-19395611 | Msa0803920:intron | 40.0% | |
| !! | TTGACTAATGGGGTGTTGAT+TGG | - | chr5_3:19395808-19395827 | Msa0803920:intron | 40.0% |
| ! | GTTGATTGGTTGTGTTCTGT+AGG | - | chr5_3:19395822-19395841 | Msa0803920:CDS | 40.0% |
| TGTTCTGTAGGAACGTGATT+TGG | - | chr5_3:19395834-19395853 | Msa0803920:intron | 40.0% | |
| TCCAAAGGTTCTACCAACTT+AGG | + | chr5_3:19395892-19395911 | None:intergenic | 40.0% | |
| ! | AGAACCTTTGGAGAAGATTG+TGG | - | chr5_3:19395900-19395919 | Msa0803920:intron | 40.0% |
| CTATCCACAATCTTCTCCAA+AGG | + | chr5_3:19395907-19395926 | None:intergenic | 40.0% | |
| ! | CTTTGGAGAAGATTGTGGAT+AGG | - | chr5_3:19395905-19395924 | Msa0803920:intron | 40.0% |
| AAGTACCTGCACATCTTCAA+TGG | + | chr5_3:19395998-19396017 | None:intergenic | 40.0% | |
| ! | TGAAGATGTGCAGGTACTTT+TGG | - | chr5_3:19395999-19396018 | Msa0803920:intron | 40.0% |
| GAAAGAACAGGCTGTTATTG+GGG | + | chr5_3:19396916-19396935 | None:intergenic | 40.0% | |
| GTGAAAGAACAGGCTGTTAT+TGG | + | chr5_3:19396918-19396937 | None:intergenic | 40.0% | |
| TGGAAGGTAAGTGAAAGAAC+AGG | + | chr5_3:19396928-19396947 | None:intergenic | 40.0% | |
| ! | CTCCTTTATTTGGTCTGCAA+AGG | + | chr5_3:19397025-19397044 | None:intergenic | 40.0% |
| CTTTGCAGACCAAATAAAGG+AGG | - | chr5_3:19397023-19397042 | Msa0803920:intron | 40.0% | |
| GGTGATTATGTACTAGGCTT+TGG | - | chr5_3:19397193-19397212 | Msa0803920:CDS | 40.0% | |
| ACTGAGCATATCATGTTCTC+AGG | - | chr5_3:19397244-19397263 | Msa0803920:intron | 40.0% | |
| CATATCATGTTCTCAGGCTA+GGG | - | chr5_3:19397250-19397269 | Msa0803920:intron | 40.0% | |
| ATAGGACAAGCAACATGAAC+TGG | - | chr5_3:19397338-19397357 | Msa0803920:intron | 40.0% | |
| CTTCAGGAATTTGAGCACAT+TGG | + | chr5_3:19397545-19397564 | None:intergenic | 40.0% | |
| CTCAAATTCCTGAAGCAAAG+TGG | - | chr5_3:19397550-19397569 | Msa0803920:intron | 40.0% | |
| ATGTACAACCACTTTGCTTC+AGG | + | chr5_3:19397561-19397580 | None:intergenic | 40.0% | |
| AAAATTTGGGGAGAACGTTC+TGG | - | chr5_3:19397678-19397697 | Msa0803920:intron | 40.0% | |
| GCATCCAATGTAATTACCCA+TGG | + | chr5_3:19397925-19397944 | None:intergenic | 40.0% | |
| !! | TATTTAACTCGAGCATCGAG+TGG | - | chr5_3:19398012-19398031 | Msa0803920:intron | 40.0% |
| ATTGCCTCATTAGAGGAAGA+TGG | + | chr5_3:19398559-19398578 | None:intergenic | 40.0% | |
| CCAAGTTATTGCCTCATTAG+AGG | + | chr5_3:19398566-19398585 | None:intergenic | 40.0% | |
| CCTCTAATGAGGCAATAACT+TGG | - | chr5_3:19398563-19398582 | Msa0803920:intron | 40.0% | |
| TAAGGTCTTCCATATCTGCA+AGG | + | chr5_3:19398605-19398624 | None:intergenic | 40.0% | |
| !!! | CACATTGGGACATTAGCTTT+TGG | - | chr5_3:19398670-19398689 | Msa0803920:CDS | 40.0% |
| !!! | ACATTAGCTTTTGGAGTGAG+AGG | - | chr5_3:19398679-19398698 | Msa0803920:CDS | 40.0% |
| GGAGAAAAAGGAACGTTTAG+TGG | + | chr5_3:19399084-19399103 | None:intergenic | 40.0% | |
| GGGGAATGAACTTTCATATG+TGG | + | chr5_3:19399190-19399209 | None:intergenic | 40.0% | |
| TTCCCCCCAGTTATAGTATA+TGG | - | chr5_3:19399204-19399223 | Msa0803920:intron | 40.0% | |
| AAATTGGTCAATGGGGCAAA+CGG | + | chr5_3:19399240-19399259 | None:intergenic | 40.0% | |
| TCTCTGCCAAATGTTATGGA+TGG | - | chr5_3:19399386-19399405 | Msa0803920:intron | 40.0% | |
| ATTGAAATTGAGCCAGCTGA+CGG | - | chr5_3:19399440-19399459 | Msa0803920:intron | 40.0% | |
| ! | GACTCCCTTTTATTCATCTG+TGG | - | chr5_3:19399480-19399499 | Msa0803920:intron | 40.0% |
| TTTCGTGTCAAAGATTCCTC+AGG | - | chr5_3:19399585-19399604 | Msa0803920:intron | 40.0% | |
| AACCTTGATGAGTTACCATC+AGG | + | chr5_3:19399714-19399733 | None:intergenic | 40.0% | |
| TGTTTGATTGCACACCATGT+GGG | + | chr5_3:19399745-19399764 | None:intergenic | 40.0% | |
| AGTTGTCTGGGCTATATCAA+TGG | - | chr5_3:19399881-19399900 | Msa0803920:intron | 40.0% | |
| GTTGTCTGGGCTATATCAAT+GGG | - | chr5_3:19399882-19399901 | Msa0803920:intron | 40.0% | |
| GTAAATACAGCAAGACTGAG+AGG | + | chr5_3:19400099-19400118 | None:intergenic | 40.0% | |
| !!! | CGACATTCATTTTGAAACGG+AGG | + | chr5_3:19400229-19400248 | None:intergenic | 40.0% |
| !!! | TGGTTGCTTTTTCCTTTTGG+TGG | + | chr5_3:19400544-19400563 | None:intergenic | 40.0% |
| AAGCTTAACCATCAAGCACA+AGG | - | chr5_3:19400633-19400652 | Msa0803920:CDS | 40.0% | |
| AAGATATGCCTTGTGCTTGA+TGG | + | chr5_3:19400644-19400663 | None:intergenic | 40.0% | |
| CAAGCACAAGGCATATCTTA+AGG | - | chr5_3:19400645-19400664 | Msa0803920:CDS | 40.0% | |
| CATGCTTAATCACCTGATGA+TGG | - | chr5_3:19400691-19400710 | Msa0803920:CDS | 40.0% | |
| GGAAACCTTCATCCTAACTT+GGG | - | chr5_3:19400811-19400830 | Msa0803920:intron | 40.0% | |
| AGTTTCCCAAGTTAGGATGA+AGG | + | chr5_3:19400819-19400838 | None:intergenic | 40.0% | |
| AAACAGGAGTTTCCCAAGTT+AGG | + | chr5_3:19400826-19400845 | None:intergenic | 40.0% | |
| ACAGTCTCAACCTGAGAAAA+AGG | + | chr5_3:19401184-19401203 | None:intergenic | 40.0% | |
| GAGACTGTCTTCCATGAATT+TGG | - | chr5_3:19401196-19401215 | Msa0803920:intron | 40.0% | |
| CACTTCAACACATGCTTACT+AGG | - | chr5_3:19401224-19401243 | Msa0803920:intron | 40.0% | |
| ATGCTTACTAGGGAAGATGA+GGG | - | chr5_3:19401235-19401254 | Msa0803920:intron | 40.0% | |
| TGGTATTAGGGGAATAGAGT+GGG | - | chr5_3:19401267-19401286 | Msa0803920:intron | 40.0% | |
| GCTTCTGATATACGTCTTCT+GGG | + | chr5_3:19401519-19401538 | None:intergenic | 40.0% | |
| AGCTTCTGATATACGTCTTC+TGG | + | chr5_3:19401520-19401539 | None:intergenic | 40.0% | |
| GTAACACAACCCAAGAAAGA+TGG | + | chr5_3:19402007-19402026 | None:intergenic | 40.0% | |
| TCTGCGATCAACATCATAGA+TGG | + | chr5_3:19402140-19402159 | None:intergenic | 40.0% | |
| AGCTGGATACTATAGCTACA+AGG | - | chr5_3:19402591-19402610 | Msa0803920:intron | 40.0% | |
| CATATAGTCCACAGAAAAGG+GGG | - | chr5_3:19402677-19402696 | Msa0803920:intron | 40.0% | |
| AGATGCTTTCTCTGCATTTG+AGG | - | chr5_3:19402763-19402782 | Msa0803920:intron | 40.0% | |
| TGCAGGATTGGATGATAACA+AGG | - | chr5_3:19402787-19402806 | Msa0803920:intron | 40.0% | |
| TACACAGGCTGTTGTAGAAA+CGG | - | chr5_3:19403029-19403048 | Msa0803920:intron | 40.0% | |
| ATCTCAATTCTCACCTCAAG+TGG | + | chr5_3:19403102-19403121 | None:intergenic | 40.0% | |
| ATCTGTCACATGCATATGTG+GGG | - | chr5_3:19403205-19403224 | Msa0803920:CDS | 40.0% | |
| CTCTATCCTAAGCTGCAATT+AGG | + | chr5_3:19403361-19403380 | None:intergenic | 40.0% | |
| CTAATTGCAGCTTAGGATAG+AGG | - | chr5_3:19403359-19403378 | Msa0803920:CDS | 40.0% | |
| AGAGTGAGAATGTGAGTGTG+AGG | + | chr5_3:19394950-19394969 | None:intergenic | 45.0% | |
| GAAGCCGAACAAGTAAACGA+AGG | + | chr5_3:19395122-19395141 | None:intergenic | 45.0% | |
| TACTTGTTCGGCTTCTTCCA+TGG | - | chr5_3:19395127-19395146 | Msa0803920:intron | 45.0% | |
| ! | TCAAGAAGAGCACGAATTCC+CGG | + | chr5_3:19395242-19395261 | None:intergenic | 45.0% |
| CACTAACATCGACACACCAA+CGG | - | chr5_3:19395566-19395585 | Msa0803920:intron | 45.0% | |
| ! | TCTGTAGGAACGTGATTTGG+AGG | - | chr5_3:19395837-19395856 | Msa0803920:intron | 45.0% |
| ! | GTGATTTGGAGGAGCTTGAA+CGG | - | chr5_3:19395848-19395867 | Msa0803920:intron | 45.0% |
| !! | GCCTAAGTTGGTAGAACCTT+TGG | - | chr5_3:19395888-19395907 | Msa0803920:intron | 45.0% |
| GGAGAAGATTGTGGATAGGT+TGG | - | chr5_3:19395909-19395928 | Msa0803920:intron | 45.0% | |
| ! | TGGATAGGTTGGCTGTTGTT+TGG | - | chr5_3:19395920-19395939 | Msa0803920:intron | 45.0% |
| ! | GGATAGGTTGGCTGTTGTTT+GGG | - | chr5_3:19395921-19395940 | Msa0803920:intron | 45.0% |
| ! | GATAGGTTGGCTGTTGTTTG+GGG | - | chr5_3:19395922-19395941 | Msa0803920:intron | 45.0% |
| ! | ATAGGTTGGCTGTTGTTTGG+GGG | - | chr5_3:19395923-19395942 | Msa0803920:intron | 45.0% |
| GCACATCTTCAATGGCTGAA+CGG | + | chr5_3:19395990-19396009 | None:intergenic | 45.0% | |
| TTCAGCCATTGAAGATGTGC+AGG | - | chr5_3:19395990-19396009 | Msa0803920:intron | 45.0% | |
| !! | TTGGTTGTGCTTTGGGATGT+AGG | - | chr5_3:19396116-19396135 | Msa0803920:intron | 45.0% |
| !! | TGGTTGTGCTTTGGGATGTA+GGG | - | chr5_3:19396117-19396136 | Msa0803920:intron | 45.0% |
| CGATTCAAGACTCTCCTGAT+TGG | - | chr5_3:19396528-19396547 | Msa0803920:intron | 45.0% | |
| TCGCTAAGTGTCTTCCAATC+AGG | + | chr5_3:19396545-19396564 | None:intergenic | 45.0% | |
| TAGAAGCTGAGAACCAGCTA+CGG | + | chr5_3:19396706-19396725 | None:intergenic | 45.0% | |
| CGACATTTCCGACAATGAAG+CGG | + | chr5_3:19396825-19396844 | None:intergenic | 45.0% | |
| GCATATCATGTTCTCAGGCT+AGG | - | chr5_3:19397249-19397268 | Msa0803920:intron | 45.0% | |
| GTGATGCATGTGGTTCCTTT+GGG | + | chr5_3:19397405-19397424 | None:intergenic | 45.0% | |
| TGTGATGCATGTGGTTCCTT+TGG | + | chr5_3:19397406-19397425 | None:intergenic | 45.0% | |
| ATTTCAGGCTGTGATGCATG+TGG | + | chr5_3:19397415-19397434 | None:intergenic | 45.0% | |
| ATTGGCAGTATATGTCAGCG+AGG | - | chr5_3:19397444-19397463 | Msa0803920:intron | 45.0% | |
| ATGGTTTCATCCATAGGAGC+TGG | - | chr5_3:19397642-19397661 | Msa0803920:intron | 45.0% | |
| TTCATCCATAGGAGCTGGAA+AGG | - | chr5_3:19397647-19397666 | Msa0803920:intron | 45.0% | |
| GATAACCTTTCCAGCTCCTA+TGG | + | chr5_3:19397655-19397674 | None:intergenic | 45.0% | |
| GATTACCTGCTACTGCTCTT+GGG | - | chr5_3:19397752-19397771 | Msa0803920:intron | 45.0% | |
| TGCACAAAGCGCAGTATCTA+AGG | - | chr5_3:19397780-19397799 | Msa0803920:intron | 45.0% | |
| AAAATGCCACCGCTGAGAAT+GGG | - | chr5_3:19397899-19397918 | Msa0803920:intron | 45.0% | |
| TGGGCCATGGGTAATTACAT+TGG | - | chr5_3:19397918-19397937 | Msa0803920:intron | 45.0% | |
| AGAAGCTTCGTAAAGCTTCC+TGG | - | chr5_3:19398238-19398257 | Msa0803920:intron | 45.0% | |
| GAAGCTTCGTAAAGCTTCCT+GGG | - | chr5_3:19398239-19398258 | Msa0803920:intron | 45.0% | |
| ACGTCCATCTTCCTCTAATG+AGG | - | chr5_3:19398552-19398571 | Msa0803920:intron | 45.0% | |
| ! | TTCTAAAGACCAGGGTGCAT+TGG | - | chr5_3:19398632-19398651 | Msa0803920:CDS | 45.0% |
| TTCAAGTGAGTGAGTGTGAG+AGG | + | chr5_3:19398738-19398757 | None:intergenic | 45.0% | |
| AATTGGTCAATGGGGCAAAC+GGG | + | chr5_3:19399239-19399258 | None:intergenic | 45.0% | |
| GCAGATGTATGAGCTTTCCA+AGG | + | chr5_3:19399330-19399349 | None:intergenic | 45.0% | |
| TTCATCTGTGGTTCTTGCGT+TGG | - | chr5_3:19399492-19399511 | Msa0803920:intron | 45.0% | |
| TCATCTGTGGTTCTTGCGTT+GGG | - | chr5_3:19399493-19399512 | Msa0803920:intron | 45.0% | |
| ! | TTTTCCGAAGGACGACTGTA+GGG | + | chr5_3:19399639-19399658 | None:intergenic | 45.0% |
| ! | TTTTTCCGAAGGACGACTGT+AGG | + | chr5_3:19399640-19399659 | None:intergenic | 45.0% |
| ACAGTCGTCCTTCGGAAAAA+AGG | - | chr5_3:19399640-19399659 | Msa0803920:intron | 45.0% | |
| TAACTCATCAAGGTTGCCTG+TGG | - | chr5_3:19399719-19399738 | Msa0803920:CDS | 45.0% | |
| GTGTTTGATTGCACACCATG+TGG | + | chr5_3:19399746-19399765 | None:intergenic | 45.0% | |
| TGCAATCAAACACCTCCAGT+AGG | - | chr5_3:19399753-19399772 | Msa0803920:CDS | 45.0% | |
| !! | AAACTTGGCTTGCTTCCTAC+TGG | + | chr5_3:19399771-19399790 | None:intergenic | 45.0% |
| GGGAAACCTTCATCCTAACT+TGG | - | chr5_3:19400810-19400829 | Msa0803920:intron | 45.0% | |
| GAAGTGCGTGTCCAAATTCA+TGG | + | chr5_3:19401210-19401229 | None:intergenic | 45.0% | |
| CATGCTTACTAGGGAAGATG+AGG | - | chr5_3:19401234-19401253 | Msa0803920:intron | 45.0% | |
| AGGGTCTAGTTGCTGGTATT+AGG | - | chr5_3:19401254-19401273 | Msa0803920:intron | 45.0% | |
| GGGTCTAGTTGCTGGTATTA+GGG | - | chr5_3:19401255-19401274 | Msa0803920:intron | 45.0% | |
| GGTCTAGTTGCTGGTATTAG+GGG | - | chr5_3:19401256-19401275 | Msa0803920:intron | 45.0% | |
| CTGGTATTAGGGGAATAGAG+TGG | - | chr5_3:19401266-19401285 | Msa0803920:intron | 45.0% | |
| ! | ACAAAGAGGTATAGGAGGCA+CGG | + | chr5_3:19402244-19402263 | None:intergenic | 45.0% |
| AGACGGCGTAATCAACAAAG+AGG | + | chr5_3:19402258-19402277 | None:intergenic | 45.0% | |
| GCCATGTACAATGGAACAGA+CGG | + | chr5_3:19402275-19402294 | None:intergenic | 45.0% | |
| TTGTTAGGTGGATATGCAGC+TGG | - | chr5_3:19402574-19402593 | Msa0803920:intron | 45.0% | |
| ! | AGTCATTTCCCCCTTTTCTG+TGG | + | chr5_3:19402688-19402707 | None:intergenic | 45.0% |
| TTCTCTGCATTTGAGGATGC+AGG | - | chr5_3:19402770-19402789 | Msa0803920:intron | 45.0% | |
| TGCATTTGAGGATGCAGGAT+TGG | - | chr5_3:19402775-19402794 | Msa0803920:intron | 45.0% | |
| ACACAGGCTGTTGTAGAAAC+GGG | - | chr5_3:19403030-19403049 | Msa0803920:intron | 45.0% | |
| TAGAAACGGGACACAAGTTC+AGG | - | chr5_3:19403043-19403062 | Msa0803920:intron | 45.0% | |
| AGAAACGGGACACAAGTTCA+GGG | - | chr5_3:19403044-19403063 | Msa0803920:intron | 45.0% | |
| TCAATTCTCACCTCAAGTGG+TGG | + | chr5_3:19403099-19403118 | None:intergenic | 45.0% | |
| CATGCATATGTGGGGTAACT+AGG | - | chr5_3:19403213-19403232 | Msa0803920:CDS | 45.0% | |
| CAAGATCCACACACCAAAGT+TGG | + | chr5_3:19403247-19403266 | None:intergenic | 45.0% | |
| TAGGTGTTTGTGCAATTCCG+TGG | - | chr5_3:19403296-19403315 | Msa0803920:CDS | 45.0% | |
| AGGTGTTTGTGCAATTCCGT+GGG | - | chr5_3:19403297-19403316 | Msa0803920:CDS | 45.0% | |
| TTGTGTCTGAGCAATGCATC+TGG | + | chr5_3:19403335-19403354 | None:intergenic | 45.0% | |
| GATGCATTGCTCAGACACAA+TGG | - | chr5_3:19403335-19403354 | Msa0803920:CDS | 45.0% | |
| CAATGGCCTAATTGCAGCTT+AGG | - | chr5_3:19403352-19403371 | Msa0803920:CDS | 45.0% | |
| !! | TAAAAATAATTATATATCAA+GGG | + | chr5_3:19398979-19398998 | None:intergenic | 5.0% |
| !! | TTAAAAATAATTATATATCA+AGG | + | chr5_3:19398980-19398999 | None:intergenic | 5.0% |
| !! | AAAATTATTATTAATTAAAG+TGG | + | chr5_3:19399999-19400018 | None:intergenic | 5.0% |
| !!! | TTTTTTCTTTTAAAAAAAAT+AGG | - | chr5_3:19400036-19400055 | Msa0803920:intron | 5.0% |
| AATCCCTTCCTTGTCCCCTT+TGG | - | chr5_3:19395048-19395067 | Msa0803920:exon | 50.0% | |
| AGACCAAAGGGGACAAGGAA+GGG | + | chr5_3:19395054-19395073 | None:intergenic | 50.0% | |
| AAGACCAAAGGGGACAAGGA+AGG | + | chr5_3:19395055-19395074 | None:intergenic | 50.0% | |
| GAAGAAGACCAAAGGGGACA+AGG | + | chr5_3:19395059-19395078 | None:intergenic | 50.0% | |
| ATCAAGAGCAGAAGCAGCCA+TGG | + | chr5_3:19395147-19395166 | None:intergenic | 50.0% | |
| TGAAGCGAAGCATGTGAGAC+CGG | - | chr5_3:19395220-19395239 | Msa0803920:intron | 50.0% | |
| ! | CATGTGTCGGTGCATGTTAG+TGG | - | chr5_3:19395652-19395671 | Msa0803920:CDS | 50.0% |
| TGCATGTTAGTGGCGTGTGT+CGG | - | chr5_3:19395662-19395681 | Msa0803920:intron | 50.0% | |
| !! | CAAAAGTGTCGGTGCTACAG+AGG | - | chr5_3:19395705-19395724 | Msa0803920:intron | 50.0% |
| TCTACCAACTTAGGCCACGA+AGG | + | chr5_3:19395883-19395902 | None:intergenic | 50.0% | |
| CTCGGTCTTGCTTCTGTTGA+TGG | - | chr5_3:19396062-19396081 | Msa0803920:intron | 50.0% | |
| TTCACCTTGCATTCCGTAGC+TGG | - | chr5_3:19396690-19396709 | Msa0803920:intron | 50.0% | |
| AGAACCAGCTACGGAATGCA+AGG | + | chr5_3:19396697-19396716 | None:intergenic | 50.0% | |
| GGATTACCTGCTACTGCTCT+TGG | - | chr5_3:19397751-19397770 | Msa0803920:intron | 50.0% | |
| GAAAATGCCACCGCTGAGAA+TGG | - | chr5_3:19397898-19397917 | Msa0803920:intron | 50.0% | |
| AGACTTCCTCACGCAGAGAA+CGG | + | chr5_3:19397984-19398003 | None:intergenic | 50.0% | |
| !! | TCGAGCATCGAGTGGTGATT+TGG | - | chr5_3:19398020-19398039 | Msa0803920:intron | 50.0% |
| GGTTAGCATGGCAACCAAGA+TGG | - | chr5_3:19398185-19398204 | Msa0803920:intron | 50.0% | |
| CATCTGTGGTTCTTGCGTTG+GGG | - | chr5_3:19399494-19399513 | Msa0803920:intron | 50.0% | |
| TGATCCCTACAGTCGTCCTT+CGG | - | chr5_3:19399632-19399651 | Msa0803920:intron | 50.0% | |
| CGTCCTTCGGAAAAAAGGCA+AGG | - | chr5_3:19399645-19399664 | Msa0803920:intron | 50.0% | |
| !!! | GCACCTTGCCTTTTTTCCGA+AGG | + | chr5_3:19399651-19399670 | None:intergenic | 50.0% |
| AAAAAGGCAAGGTGCGTGGA+TGG | - | chr5_3:19399656-19399675 | Msa0803920:intron | 50.0% | |
| CGCCTGATGGTAACTCATCA+AGG | - | chr5_3:19399709-19399728 | Msa0803920:CDS | 50.0% | |
| GAAGATGAGGGTCTAGTTGC+TGG | - | chr5_3:19401247-19401266 | Msa0803920:intron | 50.0% | |
| AGTGCCAGCACGATAAGTTC+TGG | + | chr5_3:19401551-19401570 | None:intergenic | 50.0% | |
| TGGCACTCAAAGTCTTCGAC+AGG | - | chr5_3:19401564-19401583 | Msa0803920:intron | 50.0% | |
| ! | TAGATGGATTCTTGTCCCCC+AGG | + | chr5_3:19402124-19402143 | None:intergenic | 50.0% |
| AGTGATTCCTCCATTGCCAG+AGG | - | chr5_3:19402177-19402196 | Msa0803920:intron | 50.0% | |
| AATCTGTCCTCTGGCAATGG+AGG | + | chr5_3:19402187-19402206 | None:intergenic | 50.0% | |
| AGGAATCTGTCCTCTGGCAA+TGG | + | chr5_3:19402190-19402209 | None:intergenic | 50.0% | |
| CTGCAAAGGAATCTGTCCTC+TGG | + | chr5_3:19402196-19402215 | None:intergenic | 50.0% | |
| GCCGTCTGTTCCATTGTACA+TGG | - | chr5_3:19402271-19402290 | Msa0803920:intron | 50.0% | |
| AGGGAGACCATTCTTGCTCT+TGG | - | chr5_3:19403063-19403082 | Msa0803920:intron | 50.0% | |
| GAGACCATTCTTGCTCTTGG+AGG | - | chr5_3:19403066-19403085 | Msa0803920:intron | 50.0% | |
| ACCATTCTTGCTCTTGGAGG+TGG | - | chr5_3:19403069-19403088 | Msa0803920:intron | 50.0% | |
| CTGAGCAATGCATCTGGTGT+TGG | + | chr5_3:19403329-19403348 | None:intergenic | 50.0% | |
| GAAGCGAAGCATGTGAGACC+GGG | - | chr5_3:19395221-19395240 | Msa0803920:intron | 55.0% | |
| AACGGAGTGTGGAACCTTCG+TGG | - | chr5_3:19395866-19395885 | Msa0803920:intron | 55.0% | |
| GGAACCTTCGTGGCCTAAGT+TGG | - | chr5_3:19395876-19395895 | Msa0803920:intron | 55.0% | |
| ! | GTTGGCTGTTGTTTGGGGGA+TGG | - | chr5_3:19395927-19395946 | Msa0803920:intron | 55.0% |
| ACCTGCTACTGCTCTTGGGT+TGG | - | chr5_3:19397756-19397775 | Msa0803920:intron | 55.0% | |
| TACCCATGGCCCATTCTCAG+CGG | + | chr5_3:19397911-19397930 | None:intergenic | 55.0% | |
| TCCTGGGATGCTGCAGTACA+AGG | - | chr5_3:19398255-19398274 | Msa0803920:intron | 55.0% | |
| ACCTTGTACTGCAGCATCCC+AGG | + | chr5_3:19398259-19398278 | None:intergenic | 55.0% | |
| CATCAGCTTCCAATGCACCC+TGG | + | chr5_3:19398644-19398663 | None:intergenic | 55.0% | |
| ATAGGCAACTGGACTGCCTG+AGG | + | chr5_3:19399604-19399623 | None:intergenic | 55.0% | |
| CGGAAAAAAGGCAAGGTGCG+TGG | - | chr5_3:19399652-19399671 | Msa0803920:intron | 55.0% | |
| AGTCGTGTACTGTCGCCTGA+TGG | - | chr5_3:19399696-19399715 | Msa0803920:CDS | 55.0% | |
| !! | CTTGGCTTGCTTCCTACTGG+AGG | + | chr5_3:19399768-19399787 | None:intergenic | 55.0% |
| ! | GCCAGCACGATAAGTTCTGG+CGG | + | chr5_3:19401548-19401567 | None:intergenic | 55.0% |
| GCCACCTCCAAGAGCAAGAA+TGG | + | chr5_3:19403073-19403092 | None:intergenic | 55.0% | |
| !! | CTGGTGTTGGTTCTCTCCCA+CGG | + | chr5_3:19403316-19403335 | None:intergenic | 55.0% |
| TAGTGGCGTGTGTCGGACAC+CGG | - | chr5_3:19395669-19395688 | Msa0803920:intron | 60.0% | |
| GGAGGAGCTTGAACGGAGTG+TGG | - | chr5_3:19395855-19395874 | Msa0803920:intron | 60.0% | |
| GCCAACCCAAGAGCAGTAGC+AGG | + | chr5_3:19397760-19397779 | None:intergenic | 60.0% | |
| CACCGCTGAGAATGGGCCAT+GGG | - | chr5_3:19397906-19397925 | Msa0803920:intron | 60.0% | |
| TCGCAACCGTTCTCTGCGTG+AGG | - | chr5_3:19397975-19397994 | Msa0803920:intron | 60.0% | |
| AAGGTTGCCTGTGGCCCACA+TGG | - | chr5_3:19399728-19399747 | Msa0803920:CDS | 60.0% | |
| TTGCACACCATGTGGGCCAC+AGG | + | chr5_3:19399738-19399757 | None:intergenic | 60.0% | |
| GCCGCCAGAACTTATCGTGC+TGG | - | chr5_3:19401544-19401563 | Msa0803920:intron | 60.0% | |
| AGGTGGCAAGCCACCACTTG+AGG | - | chr5_3:19403086-19403105 | Msa0803920:intron | 60.0% | |
| CCATGGCCCATTCTCAGCGG+TGG | + | chr5_3:19397908-19397927 | None:intergenic | 65.0% | |
| CCACCGCTGAGAATGGGCCA+TGG | - | chr5_3:19397905-19397924 | Msa0803920:intron | 65.0% | |
| ! | GCCAGCTGACGGTCTAGCTC+CGG | - | chr5_3:19399451-19399470 | Msa0803920:intron | 65.0% |
| ACCGGAGCTAGACCGTCAGC+TGG | + | chr5_3:19399455-19399474 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 19394882 | 19403541 | 19394882 | ID=Msa0803920;Name=Msa0803920 |
| chr5_3 | mRNA | 19394882 | 19403541 | 19394882 | ID=Msa0803920-mRNA-1;Parent=Msa0803920;Name=Msa0803920-mRNA-1;_AED=0.07;_eAED=0.07;_QI=6|1|1|1|1|1|17|168|786 |
| chr5_3 | exon | 19394882 | 19395124 | 19394882 | ID=Msa0803920-mRNA-1:exon:7954;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19395316 | 19395387 | 19395316 | ID=Msa0803920-mRNA-1:exon:7953;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19395615 | 19395680 | 19395615 | ID=Msa0803920-mRNA-1:exon:7952;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19395811 | 19395842 | 19395811 | ID=Msa0803920-mRNA-1:exon:7951;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19396188 | 19396347 | 19396188 | ID=Msa0803920-mRNA-1:exon:7950;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19396838 | 19396955 | 19396838 | ID=Msa0803920-mRNA-1:exon:7949;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19397085 | 19397230 | 19397085 | ID=Msa0803920-mRNA-1:exon:7948;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19398617 | 19398862 | 19398617 | ID=Msa0803920-mRNA-1:exon:7947;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19398951 | 19399058 | 19398951 | ID=Msa0803920-mRNA-1:exon:7946;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19399692 | 19399813 | 19399692 | ID=Msa0803920-mRNA-1:exon:7945;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19400147 | 19400237 | 19400147 | ID=Msa0803920-mRNA-1:exon:7944;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19400301 | 19400531 | 19400301 | ID=Msa0803920-mRNA-1:exon:7943;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19400622 | 19400765 | 19400622 | ID=Msa0803920-mRNA-1:exon:7942;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19401316 | 19401392 | 19401316 | ID=Msa0803920-mRNA-1:exon:7941;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19401836 | 19401959 | 19401836 | ID=Msa0803920-mRNA-1:exon:7940;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19402412 | 19402579 | 19402412 | ID=Msa0803920-mRNA-1:exon:7939;Parent=Msa0803920-mRNA-1 |
| chr5_3 | exon | 19403155 | 19403541 | 19403155 | ID=Msa0803920-mRNA-1:exon:7938;Parent=Msa0803920-mRNA-1 |
| chr5_3 | five_prime_UTR | 19403536 | 19403541 | 19403536 | ID=Msa0803920-mRNA-1:five_prime_utr;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19403155 | 19403535 | 19403155 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19402412 | 19402579 | 19402412 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19401836 | 19401959 | 19401836 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19401316 | 19401392 | 19401316 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19400622 | 19400765 | 19400622 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19400301 | 19400531 | 19400301 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19400147 | 19400237 | 19400147 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19399692 | 19399813 | 19399692 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19398951 | 19399058 | 19398951 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19398617 | 19398862 | 19398617 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19397085 | 19397230 | 19397085 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19396838 | 19396955 | 19396838 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19396188 | 19396347 | 19396188 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19395811 | 19395842 | 19395811 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19395615 | 19395680 | 19395615 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19395316 | 19395387 | 19395316 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | CDS | 19395050 | 19395124 | 19395050 | ID=Msa0803920-mRNA-1:cds;Parent=Msa0803920-mRNA-1 |
| chr5_3 | three_prime_UTR | 19394882 | 19395049 | 19394882 | ID=Msa0803920-mRNA-1:three_prime_utr;Parent=Msa0803920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
