Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068850 | XP_003624282.1 | 94.683 | 489 | 9 | 3 | 1 | 474 | 1 | 487 | 0.0 | 938 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068850 | sp|A2Q1V6|ATG4_MEDTR | 94.683 | 489 | 9 | 3 | 1 | 474 | 1 | 487 | 0.0 | 938 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068850 | G7KTD2 | 94.683 | 489 | 9 | 3 | 1 | 474 | 1 | 487 | 0.0 | 938 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0667770 | Msa1068850 | 0.814991 | 1.162097e-51 | -8.615850e-47 |
| Msa1029740 | Msa1068850 | 0.953007 | 7.051111e-111 | -8.615850e-47 |
| Msa1068850 | Msa1156630 | 0.912910 | 1.132839e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068850 | MtrunA17_Chr7g0250241 | 87.730 | 489 | 10 | 3 | 1 | 474 | 1 | 454 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068850 | AT2G44140.1 | 60.179 | 447 | 157 | 7 | 3 | 433 | 1 | 442 | 0.0 | 546 |
| Msa1068850 | AT2G44140.3 | 60.179 | 447 | 157 | 7 | 3 | 433 | 1 | 442 | 0.0 | 546 |
| Msa1068850 | AT2G44140.2 | 62.694 | 386 | 126 | 5 | 64 | 433 | 14 | 397 | 1.46e-177 | 504 |
| Msa1068850 | AT2G44140.4 | 63.889 | 360 | 114 | 3 | 89 | 433 | 1 | 359 | 7.05e-172 | 488 |
| Msa1068850 | AT2G44140.5 | 60.428 | 374 | 142 | 5 | 3 | 375 | 1 | 369 | 4.89e-163 | 466 |
| Msa1068850 | AT3G59950.1 | 56.823 | 447 | 174 | 5 | 3 | 432 | 1 | 445 | 6.38e-163 | 469 |
| Msa1068850 | AT3G59950.4 | 63.231 | 359 | 117 | 1 | 89 | 432 | 1 | 359 | 5.82e-159 | 456 |
| Msa1068850 | AT3G59950.5 | 57.979 | 376 | 152 | 5 | 3 | 375 | 1 | 373 | 7.48e-137 | 400 |
| Msa1068850 | AT3G59950.2 | 54.573 | 328 | 145 | 4 | 3 | 328 | 1 | 326 | 1.11e-105 | 319 |
| Msa1068850 | AT3G59950.3 | 62.602 | 246 | 92 | 0 | 89 | 334 | 1 | 246 | 1.87e-104 | 312 |
Find 136 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGCTATTTACGTTGTTTC+TGG | 0.136184 | 7_2:-64237127 | Msa1068850:CDS |
| AGAGAATGATGAAGAAATTT+TGG | 0.165836 | 7_2:+64239447 | None:intergenic |
| TTATTGGTTCCTTTGGTTCT+TGG | 0.168245 | 7_2:-64236998 | Msa1068850:CDS |
| TATTGTAGCCCGACATTTAT+AGG | 0.173191 | 7_2:+64235173 | None:intergenic |
| ACAATTCTGTAGCCAATAAA+AGG | 0.199002 | 7_2:+64234933 | None:intergenic |
| AGTATACTAGTGATGTTAAT+TGG | 0.200002 | 7_2:-64237708 | Msa1068850:CDS |
| ATTGACATCTTGCAACTATT+TGG | 0.209877 | 7_2:-64237316 | Msa1068850:CDS |
| TTGAACTCATTGTGATTCTT+TGG | 0.224858 | 7_2:-64235038 | Msa1068850:three_prime_UTR |
| CGGTTCAATGAGGAGATTTC+AGG | 0.252524 | 7_2:-64238016 | Msa1068850:CDS |
| GCCACGTAAAACATAGAATT+TGG | 0.253924 | 7_2:+64238317 | None:intergenic |
| ATTGATCCATCTTTGGCTAT+TGG | 0.271467 | 7_2:-64235520 | Msa1068850:CDS |
| AGATTCAATTGATCCATCTT+TGG | 0.287046 | 7_2:-64235527 | Msa1068850:CDS |
| TCCTCAGAGCCTTGGAATCT+TGG | 0.287759 | 7_2:-64236308 | Msa1068850:CDS |
| TTAAAAGTTGACTGCAATAA+AGG | 0.294600 | 7_2:+64236334 | None:intergenic |
| TGTTTACTCATTTGTTCATA+TGG | 0.297579 | 7_2:-64235008 | Msa1068850:three_prime_UTR |
| ATCGTGAATTGTTGTTCTTC+AGG | 0.318462 | 7_2:+64239470 | None:intergenic |
| CTTCAAGCTGGTAAAGGTTA+TGG | 0.328585 | 7_2:-64237256 | Msa1068850:CDS |
| TGGTCAACCTTCTTTACATC+TGG | 0.335280 | 7_2:-64238147 | Msa1068850:CDS |
| GGTGCTTCGACATACATTAT+TGG | 0.338715 | 7_2:-64236274 | Msa1068850:CDS |
| TTCAGGTATGCGACTTCGTT+CGG | 0.342350 | 7_2:+64239487 | None:intergenic |
| CCTCAGAGCCTTGGAATCTT+GGG | 0.343448 | 7_2:-64236307 | Msa1068850:CDS |
| CAAGCTCTGATGGCGATATA+TGG | 0.346988 | 7_2:-64237960 | Msa1068850:CDS |
| CTAGCTGTTGGGTCATGGGT+GGG | 0.361496 | 7_2:-64237232 | Msa1068850:CDS |
| AAGATGGATCAATTGAATCT+AGG | 0.366440 | 7_2:+64235530 | None:intergenic |
| CTTGCTCATTCTTCTCCCTC+TGG | 0.367196 | 7_2:+64237167 | None:intergenic |
| ATGGTCTAGCTGTTGGGTCA+TGG | 0.369139 | 7_2:-64237237 | Msa1068850:CDS |
| GATGGCGATATATGGCTTCT+AGG | 0.371719 | 7_2:-64237952 | Msa1068850:CDS |
| GTATACTAGTGATGTTAATT+GGG | 0.374403 | 7_2:-64237707 | Msa1068850:CDS |
| AGATTTCAGGAGCGTGTACT+AGG | 0.390219 | 7_2:-64238003 | Msa1068850:CDS |
| AAACTCTAAACAGCGTTTGC+AGG | 0.391047 | 7_2:+64237054 | None:intergenic |
| TGGTCTAGCTGTTGGGTCAT+GGG | 0.397135 | 7_2:-64237236 | Msa1068850:CDS |
| CAGTCAGATGCTTGTTGCTC+AGG | 0.397178 | 7_2:-64237668 | Msa1068850:intron |
| TTTAAATTTCCTCAGAGCCT+TGG | 0.405739 | 7_2:-64236316 | Msa1068850:CDS |
| ATGTGCCTGCTAATGCTGTT+AGG | 0.412532 | 7_2:+64235556 | None:intergenic |
| TTCACAAATTAGGTAGATCA+TGG | 0.414869 | 7_2:-64237515 | Msa1068850:CDS |
| TTTCAAGGGGCCTAGTTCCT+TGG | 0.415808 | 7_2:-64237033 | Msa1068850:CDS |
| GCACTCTTCAAACGTTTAGT+AGG | 0.419679 | 7_2:-64235072 | Msa1068850:three_prime_UTR |
| GACTTGATAAAGTCAATCTA+AGG | 0.424719 | 7_2:-64236976 | Msa1068850:intron |
| TAGCTGTTGGGTCATGGGTG+GGG | 0.425413 | 7_2:-64237231 | Msa1068850:CDS |
| AGTTTCCCAAGGCTTCCTTA+TGG | 0.427428 | 7_2:-64238167 | Msa1068850:CDS |
| ACAGTTCATTCTCGAAATAG+TGG | 0.430178 | 7_2:-64238072 | Msa1068850:CDS |
| AGATGGATCAATTGAATCTA+GGG | 0.433513 | 7_2:+64235531 | None:intergenic |
| TATTGAAGGATTTATGTGAT+AGG | 0.437062 | 7_2:-64238284 | Msa1068850:CDS |
| ATTTCACAGCATGAATCAAC+TGG | 0.438381 | 7_2:-64237916 | Msa1068850:CDS |
| AAAGGTTATGGTCTAGCTGT+TGG | 0.438899 | 7_2:-64237244 | Msa1068850:CDS |
| TTCTGCAAGCTTAGTTGCTC+GGG | 0.438986 | 7_2:+64235360 | None:intergenic |
| TGTAAAGAAGGTTGACCATA+AGG | 0.441752 | 7_2:+64238152 | None:intergenic |
| ATTGGTAGCGTACGTGGATA+AGG | 0.442501 | 7_2:+64239411 | None:intergenic |
| GAATTGCCAGTCATCTTCAT+TGG | 0.444109 | 7_2:+64235195 | None:intergenic |
| TTGTTTACCACTGCCGAGTT+CGG | 0.446268 | 7_2:-64235116 | Msa1068850:three_prime_UTR |
| GAATTACTTGTGACTTGCAT+TGG | 0.451605 | 7_2:+64235289 | None:intergenic |
| GCATCTTCAATGCAGACAAC+TGG | 0.452358 | 7_2:+64237076 | None:intergenic |
| AATTGTAGTGGATATTACTT+TGG | 0.452497 | 7_2:-64234916 | Msa1068850:three_prime_UTR |
| TGCAGATATTGACACAAACT+TGG | 0.453753 | 7_2:-64238354 | Msa1068850:intron |
| GACTGAGCTACAGTGAATAA+TGG | 0.459266 | 7_2:+64235322 | None:intergenic |
| AACCTTCTTCAAGCTGGTAA+AGG | 0.461307 | 7_2:-64237262 | Msa1068850:CDS |
| GTCACAAGTAATTCTGTGTC+AGG | 0.467454 | 7_2:-64235280 | Msa1068850:CDS |
| AATTACTTGTGACTTGCATT+GGG | 0.467885 | 7_2:+64235290 | None:intergenic |
| TCAATATATTCTTTATCCAC+TGG | 0.468590 | 7_2:+64237334 | None:intergenic |
| AACCTTTACCAGCTTGAAGA+AGG | 0.471470 | 7_2:+64237260 | None:intergenic |
| TGGCTTCATAATGGTATTGA+AGG | 0.475033 | 7_2:-64238298 | Msa1068850:exon |
| CTTCTGCAAGCTTAGTTGCT+CGG | 0.477017 | 7_2:+64235359 | None:intergenic |
| GGTTGACCATAAGGAAGCCT+TGG | 0.480154 | 7_2:+64238161 | None:intergenic |
| GTGCCCGCCTCTTCAAAGGC+AGG | 0.484347 | 7_2:-64238204 | Msa1068850:CDS |
| TCTAGCTGTTGGGTCATGGG+TGG | 0.486738 | 7_2:-64237233 | Msa1068850:CDS |
| CTTTGGCAATGTCAAATAAG+TGG | 0.491327 | 7_2:-64234899 | Msa1068850:three_prime_UTR |
| CATGTGCGACACATAGCATA+TGG | 0.492479 | 7_2:+64237208 | None:intergenic |
| TACCAGCTTGAAGAAGGTTG+TGG | 0.493797 | 7_2:+64237266 | None:intergenic |
| TATTGGTGTTCAGAATGATA+AGG | 0.494330 | 7_2:-64236257 | Msa1068850:CDS |
| TAAAATCCAATAGCCAAAGA+TGG | 0.496148 | 7_2:+64235514 | None:intergenic |
| AAGGTTATGGTCTAGCTGTT+GGG | 0.496723 | 7_2:-64237243 | Msa1068850:CDS |
| TGGCAATTCCTATAAATGTC+GGG | 0.498592 | 7_2:-64235181 | Msa1068850:exon |
| ATGAACCTTGTTAATGATGC+AGG | 0.501355 | 7_2:-64235220 | Msa1068850:CDS |
| CATATGCTATGTGTCGCACA+TGG | 0.515009 | 7_2:-64237207 | Msa1068850:CDS |
| ATCCACAACCTTCTTCAAGC+TGG | 0.518114 | 7_2:-64237268 | Msa1068850:CDS |
| GCAGAGGTGTCCAAGGAACT+AGG | 0.518806 | 7_2:+64237023 | None:intergenic |
| GAAACAACGTAAATAGCCAT+TGG | 0.522414 | 7_2:+64237130 | None:intergenic |
| ACGTAAATAGCCATTGGAAG+TGG | 0.527082 | 7_2:+64237136 | None:intergenic |
| GGAATCTTGGGAGGAAAACC+AGG | 0.527113 | 7_2:-64236295 | Msa1068850:CDS |
| GTTGACCATAAGGAAGCCTT+GGG | 0.529980 | 7_2:+64238162 | None:intergenic |
| GCTACAATATGAATTAAGTA+AGG | 0.537034 | 7_2:-64235159 | Msa1068850:three_prime_UTR |
| TGCCCGCCTCTTCAAAGGCA+GGG | 0.539052 | 7_2:-64238203 | Msa1068850:CDS |
| GACCCTGCCTTTGAAGAGGC+GGG | 0.540202 | 7_2:+64238201 | None:intergenic |
| TCAGGTGCCCGCCTCTTCAA+AGG | 0.542478 | 7_2:-64238208 | Msa1068850:CDS |
| TATACTAGTGATGTTAATTG+GGG | 0.543594 | 7_2:-64237706 | Msa1068850:CDS |
| CAATTCTGTAGCCAATAAAA+GGG | 0.545788 | 7_2:+64234934 | None:intergenic |
| CTGAGTATTATCAACAATCT+CGG | 0.546723 | 7_2:+64238227 | None:intergenic |
| GCTTAACTTCATGTGGATCA+AGG | 0.546867 | 7_2:+64236227 | None:intergenic |
| CTGGCAATTCCTATAAATGT+CGG | 0.547592 | 7_2:-64235182 | Msa1068850:exon |
| ATACATTTAACAGACCTTTG+CGG | 0.548501 | 7_2:+64237824 | None:intergenic |
| TATTCACTGTAGCTCAGTCT+AGG | 0.548706 | 7_2:-64235318 | Msa1068850:CDS |
| GCTGTGAGGAAAGTCGTTAG+TGG | 0.549234 | 7_2:-64238039 | Msa1068850:CDS |
| AGTCAAGCATCAACCGAACT+CGG | 0.552985 | 7_2:+64235103 | None:intergenic |
| AGGAGAACTGCCACTTCCAA+TGG | 0.553512 | 7_2:-64237146 | Msa1068850:CDS |
| ATTTGTTCATATGGCTAACC+AGG | 0.555159 | 7_2:-64234999 | Msa1068850:three_prime_UTR |
| AGACTCCTAACAGCATTAGC+AGG | 0.560789 | 7_2:-64235561 | Msa1068850:CDS |
| AGCGTGTACTAGGGTCATGC+AGG | 0.568179 | 7_2:-64237993 | Msa1068850:CDS |
| CAGGCACCAATGAAGATGAC+TGG | 0.568826 | 7_2:-64235201 | Msa1068850:CDS |
| ACTGACGTTTCAAGCTCTGA+TGG | 0.572355 | 7_2:-64237970 | Msa1068850:CDS |
| TATTGGCTACAGAATTGTAG+TGG | 0.572874 | 7_2:-64234928 | Msa1068850:three_prime_UTR |
| GCATCAACCGAACTCGGCAG+TGG | 0.577325 | 7_2:+64235109 | None:intergenic |
| GCAACTATTTGGTGATTCCG+AGG | 0.577389 | 7_2:-64237305 | Msa1068850:CDS |
| GTTGTTTCTGGAGATGAAGA+CGG | 0.579696 | 7_2:-64237115 | Msa1068850:CDS |
| CGAGATTGTTGATAATACTC+AGG | 0.584823 | 7_2:-64238226 | Msa1068850:CDS |
| AATAAAAGCAGAGGTGTCCA+AGG | 0.588980 | 7_2:+64237016 | None:intergenic |
| TTCATTCTCGAAATAGTGGG+TGG | 0.591536 | 7_2:-64238068 | Msa1068850:CDS |
| TAGAGTAGTTCATATTGTGA+TGG | 0.592290 | 7_2:-64234876 | Msa1068850:three_prime_UTR |
| GATTTCAGGAGCGTGTACTA+GGG | 0.594031 | 7_2:-64238002 | Msa1068850:CDS |
| TGATCCACATGAAGTTAAGC+CGG | 0.594832 | 7_2:-64236224 | Msa1068850:intron |
| CAGTTCATTCTCGAAATAGT+GGG | 0.596526 | 7_2:-64238071 | Msa1068850:CDS |
| ATAACGGCAAACCTTTGTCT+CGG | 0.597389 | 7_2:+64235488 | None:intergenic |
| TGGTGCCTGCATCATTAACA+AGG | 0.600444 | 7_2:+64235215 | None:intergenic |
| TAGTGATAGTAAGTTTCCCA+AGG | 0.604554 | 7_2:-64238178 | Msa1068850:CDS |
| CAGAGCCTTGGAATCTTGGG+AGG | 0.606666 | 7_2:-64236304 | Msa1068850:CDS |
| CCCAAGATTCCAAGGCTCTG+AGG | 0.607877 | 7_2:+64236307 | None:intergenic |
| AAGCTTGCAGAAGAATCAAA+CGG | 0.608695 | 7_2:-64235349 | Msa1068850:CDS |
| CAGAGGGAGAAGAATGAGCA+AGG | 0.610636 | 7_2:-64237166 | Msa1068850:CDS |
| AGACCCTGCCTTTGAAGAGG+CGG | 0.611555 | 7_2:+64238200 | None:intergenic |
| TGACGACACTAGATTTGAAG+AGG | 0.616064 | 7_2:-64235257 | Msa1068850:CDS |
| ACTAGACCCTGCCTTTGAAG+AGG | 0.621051 | 7_2:+64238197 | None:intergenic |
| CATACCGGCTTAACTTCATG+TGG | 0.621554 | 7_2:+64236220 | None:intergenic |
| TTTAATGTACAATAAATACC+TGG | 0.623565 | 7_2:+64234981 | None:intergenic |
| TTATCAAGTCCAAGAACCAA+AGG | 0.627304 | 7_2:+64236989 | None:intergenic |
| ATATTAATAACTTACCGCAA+AGG | 0.627695 | 7_2:-64237838 | Msa1068850:intron |
| GATGAAGACGGAGAGCGAGG+TGG | 0.633026 | 7_2:-64237103 | Msa1068850:CDS |
| GATGGATCAATTGAATCTAG+GGG | 0.634509 | 7_2:+64235532 | None:intergenic |
| ATGGAGAAAATCTGTTGACA+AGG | 0.637899 | 7_2:-64237496 | Msa1068850:intron |
| GGAGATGAAGACGGAGAGCG+AGG | 0.638450 | 7_2:-64237106 | Msa1068850:CDS |
| ATAATGTATGTCGAAGCACC+TGG | 0.644500 | 7_2:+64236277 | None:intergenic |
| TCATTCTCGAAATAGTGGGT+GGG | 0.651636 | 7_2:-64238067 | Msa1068850:CDS |
| GTGAGGAAAGTCGTTAGTGG+CGG | 0.662295 | 7_2:-64238036 | Msa1068850:CDS |
| AAAGGAACCAATAAAAGCAG+AGG | 0.666025 | 7_2:+64237007 | None:intergenic |
| TCGTTAGTGGCGGTTCAATG+AGG | 0.671495 | 7_2:-64238026 | Msa1068850:CDS |
| ACTATTTGGTGATTCCGAGG+CGG | 0.686375 | 7_2:-64237302 | Msa1068850:CDS |
| ATATGCTATGTGTCGCACAT+GGG | 0.694790 | 7_2:-64237206 | Msa1068850:CDS |
| GTGGGTGGGCAGCTGCTGTG+AGG | 0.740507 | 7_2:-64238053 | Msa1068850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAATGAATTAAGA+TGG | + | chr7_2:64235025-64235044 | None:intergenic | 10.0% |
| !!! | TTCAATATAAATTCTATTTT+GGG | - | chr7_2:64235132-64235151 | Msa1068850:three_prime_UTR | 10.0% |
| !! | TGATTTAAAAATTATGATAA+AGG | + | chr7_2:64237582-64237601 | None:intergenic | 10.0% |
| !! | CAAAATAGAATTTATATTGA+AGG | + | chr7_2:64235133-64235152 | None:intergenic | 15.0% |
| !!! | CTTCAATATAAATTCTATTT+TGG | - | chr7_2:64235131-64235150 | Msa1068850:three_prime_UTR | 15.0% |
| !!! | GTTTTTTTTTTTGTTTAAGA+TGG | - | chr7_2:64235312-64235331 | Msa1068850:CDS | 15.0% |
| !! | TTTGAACAAACAATAAAATT+GGG | + | chr7_2:64235448-64235467 | None:intergenic | 15.0% |
| !!! | TTTTGAACAAACAATAAAAT+TGG | + | chr7_2:64235449-64235468 | None:intergenic | 15.0% |
| !! | AAAAGTCAAATTTATTGAAT+TGG | - | chr7_2:64235466-64235485 | Msa1068850:intron | 15.0% |
| !!! | TTTTAATATACATACCTTAT+AGG | - | chr7_2:64236636-64236655 | Msa1068850:intron | 15.0% |
| !!! | AAAAAAATTCAGAGATTTTA+AGG | + | chr7_2:64236802-64236821 | None:intergenic | 15.0% |
| !!! | TAATTGATAGTATAAGAAAA+GGG | + | chr7_2:64237690-64237709 | None:intergenic | 15.0% |
| !! | ATAAAAAAAAATGCTGAAAA+AGG | + | chr7_2:64238205-64238224 | None:intergenic | 15.0% |
| !!! | TCAAAAGATTCCTTTTTTTT+TGG | - | chr7_2:64235159-64235178 | Msa1068850:three_prime_UTR | 20.0% |
| !!! | CAAAAGATTCCTTTTTTTTT+GGG | - | chr7_2:64235160-64235179 | Msa1068850:three_prime_UTR | 20.0% |
| !! | TTGAACAAACAATAAAATTG+GGG | + | chr7_2:64235447-64235466 | None:intergenic | 20.0% |
| !!! | TTAAATTGTAGGACATTTTT+AGG | - | chr7_2:64235586-64235605 | Msa1068850:intron | 20.0% |
| !!! | TAAATTGTAGGACATTTTTA+GGG | - | chr7_2:64235587-64235606 | Msa1068850:intron | 20.0% |
| !! | TAATAATCAGCTTATATGTT+TGG | - | chr7_2:64235984-64236003 | Msa1068850:intron | 20.0% |
| !! | TAAGGTATGTATATTAAAAC+TGG | + | chr7_2:64236635-64236654 | None:intergenic | 20.0% |
| !! | CACAAAAATAACAAAAACAA+AGG | + | chr7_2:64236969-64236988 | None:intergenic | 20.0% |
| !!! | GTAATTGATAGTATAAGAAA+AGG | + | chr7_2:64237691-64237710 | None:intergenic | 20.0% |
| !!! | AGTTTTGTTTAATTTACAAC+CGG | + | chr7_2:64238370-64238389 | None:intergenic | 20.0% |
| !! | ATCACTAAGTACATATTAAA+TGG | - | chr7_2:64238610-64238629 | Msa1068850:intron | 20.0% |
| !! | AACTAGTTATAGCAAAATAA+CGG | + | chr7_2:64238921-64238940 | None:intergenic | 20.0% |
| !! | TTTAATGTACAATAAATACC+TGG | + | chr7_2:64239412-64239431 | None:intergenic | 20.0% |
| !! | GATTTTCTTCTCAACTTTTA+AGG | + | chr7_2:64234872-64234891 | None:intergenic | 25.0% |
| !! | AGAGAATGATGAAGAAATTT+TGG | + | chr7_2:64234946-64234965 | None:intergenic | 25.0% |
| ! | TGGAAAATTGAAGAGAATAA+GGG | + | chr7_2:64235005-64235024 | None:intergenic | 25.0% |
| ! | ATGGAAAATTGAAGAGAATA+AGG | + | chr7_2:64235006-64235025 | None:intergenic | 25.0% |
| ! | TGAAGAAAACCCAAAAAAAA+AGG | + | chr7_2:64235172-64235191 | None:intergenic | 25.0% |
| ! | AAATTTCATAAGAGCTTCAA+AGG | + | chr7_2:64235237-64235256 | None:intergenic | 25.0% |
| ! | TATTGAATTGGATCGAAATA+TGG | - | chr7_2:64235478-64235497 | Msa1068850:intron | 25.0% |
| ! | TTCTGTTTAGTGGTATATAT+AGG | - | chr7_2:64235528-64235547 | Msa1068850:CDS | 25.0% |
| ! | AACCTACATGATTAAATTGT+AGG | - | chr7_2:64235575-64235594 | Msa1068850:intron | 25.0% |
| ! | AGATGTTATCTTTACACTAT+TGG | - | chr7_2:64235949-64235968 | Msa1068850:intron | 25.0% |
| ! | TATTGAAGGATTTATGTGAT+AGG | - | chr7_2:64236106-64236125 | Msa1068850:intron | 25.0% |
| !! | ATTCATGCTGTGAAATTTTA+TGG | + | chr7_2:64236470-64236489 | None:intergenic | 25.0% |
| ! | ATATTAATAACTTACCGCAA+AGG | - | chr7_2:64236552-64236571 | Msa1068850:intron | 25.0% |
| ! | AGTATACTAGTGATGTTAAT+TGG | - | chr7_2:64236682-64236701 | Msa1068850:intron | 25.0% |
| ! | GTATACTAGTGATGTTAATT+GGG | - | chr7_2:64236683-64236702 | Msa1068850:intron | 25.0% |
| ! | TATACTAGTGATGTTAATTG+GGG | - | chr7_2:64236684-64236703 | Msa1068850:intron | 25.0% |
| !!! | GCATTACTTTTTCACAAATT+AGG | - | chr7_2:64236865-64236884 | Msa1068850:intron | 25.0% |
| ! | TATTTATAATTTACAGCCAG+TGG | - | chr7_2:64237040-64237059 | Msa1068850:CDS | 25.0% |
| ! | TCAATATATTCTTTATCCAC+TGG | + | chr7_2:64237059-64237078 | None:intergenic | 25.0% |
| ! | ACAAGCATAATCGTATAAAA+AGG | + | chr7_2:64237492-64237511 | None:intergenic | 25.0% |
| ! | TTGTGTAAAAGAATCCAAAT+AGG | + | chr7_2:64237531-64237550 | None:intergenic | 25.0% |
| !! | ATTCTTTTACACAATAGAAG+TGG | - | chr7_2:64237537-64237556 | Msa1068850:intron | 25.0% |
| ! | CAAATAAGCCAATATAAACA+TGG | - | chr7_2:64237600-64237619 | Msa1068850:intron | 25.0% |
| ! | GCAAATTTCCATGTTTATAT+TGG | + | chr7_2:64237611-64237630 | None:intergenic | 25.0% |
| ! | TTAAAAGTTGACTGCAATAA+AGG | + | chr7_2:64238059-64238078 | None:intergenic | 25.0% |
| ! | GGTTGTAAATTAAACAAAAC+TGG | - | chr7_2:64238369-64238388 | Msa1068850:intron | 25.0% |
| ! | AAAACTGGCATCATATATAA+AGG | - | chr7_2:64238384-64238403 | Msa1068850:intron | 25.0% |
| !! | AAAGAGAGTGCAATATATAA+AGG | - | chr7_2:64238413-64238432 | Msa1068850:intron | 25.0% |
| !! | GTACATATTAAATGGTTTTC+AGG | - | chr7_2:64238618-64238637 | Msa1068850:intron | 25.0% |
| !!! | TTTCAGGTTGTTAATATTAC+TGG | - | chr7_2:64238634-64238653 | Msa1068850:intron | 25.0% |
| !!! | TTCAGGTTGTTAATATTACT+GGG | - | chr7_2:64238635-64238654 | Msa1068850:intron | 25.0% |
| ! | CAAAAATCATCAAAATCATC+TGG | + | chr7_2:64239008-64239027 | None:intergenic | 25.0% |
| ! | GCTACAATATGAATTAAGTA+AGG | - | chr7_2:64239231-64239250 | Msa1068850:intron | 25.0% |
| ! | TGTTTACTCATTTGTTCATA+TGG | - | chr7_2:64239382-64239401 | Msa1068850:intron | 25.0% |
| !!! | AATTGTAGTGGATATTACTT+TGG | - | chr7_2:64239474-64239493 | Msa1068850:five_prime_UTR | 25.0% |
| AATTGAAGAGAATAAGGGAT+TGG | + | chr7_2:64235000-64235019 | None:intergenic | 30.0% | |
| TGGTATATATAGGATACCAA+AGG | - | chr7_2:64235538-64235557 | Msa1068850:CDS | 30.0% | |
| GGTATATATAGGATACCAAA+GGG | - | chr7_2:64235539-64235558 | Msa1068850:CDS | 30.0% | |
| GTATATATAGGATACCAAAG+GGG | - | chr7_2:64235540-64235559 | Msa1068850:CDS | 30.0% | |
| GTCCTACAATTTAATCATGT+AGG | + | chr7_2:64235580-64235599 | None:intergenic | 30.0% | |
| !!! | TGTCTGGTTTTTAAGAAACA+TGG | + | chr7_2:64235629-64235648 | None:intergenic | 30.0% |
| TTAAAAACCAGACATGATTC+TGG | - | chr7_2:64235635-64235654 | Msa1068850:intron | 30.0% | |
| ! | ATGTTTACATTTGAAGTGTG+AGG | - | chr7_2:64235699-64235718 | Msa1068850:intron | 30.0% |
| GAATAGTTCAACTGGTTAAA+GGG | + | chr7_2:64235822-64235841 | None:intergenic | 30.0% | |
| AGAATAGTTCAACTGGTTAA+AGG | + | chr7_2:64235823-64235842 | None:intergenic | 30.0% | |
| TTCATCAATGCAGATTATGA+TGG | - | chr7_2:64235863-64235882 | Msa1068850:intron | 30.0% | |
| ! | CAGATTATGATGGCATTTTA+GGG | - | chr7_2:64235873-64235892 | Msa1068850:intron | 30.0% |
| CTGAGTATTATCAACAATCT+CGG | + | chr7_2:64236166-64236185 | None:intergenic | 30.0% | |
| TGAAAAACCAGATGTAAAGA+AGG | + | chr7_2:64236253-64236272 | None:intergenic | 30.0% | |
| ATACATTTAACAGACCTTTG+CGG | + | chr7_2:64236569-64236588 | None:intergenic | 30.0% | |
| CATCTAAACATCGCATAAAA+AGG | + | chr7_2:64236596-64236615 | None:intergenic | 30.0% | |
| TGAATATGACAAAGCAGTAT+TGG | + | chr7_2:64236844-64236863 | None:intergenic | 30.0% | |
| AATACTGCTTTGTCATATTC+AGG | - | chr7_2:64236843-64236862 | Msa1068850:intron | 30.0% | |
| TTCACAAATTAGGTAGATCA+TGG | - | chr7_2:64236875-64236894 | Msa1068850:intron | 30.0% | |
| ATTGACATCTTGCAACTATT+TGG | - | chr7_2:64237074-64237093 | Msa1068850:CDS | 30.0% | |
| GACTTGATAAAGTCAATCTA+AGG | - | chr7_2:64237414-64237433 | Msa1068850:intron | 30.0% | |
| GATAAAGGAACTTCTCTTTA+CGG | + | chr7_2:64237567-64237586 | None:intergenic | 30.0% | |
| ! | TTGATAGTATAAGAAAAGGG+TGG | + | chr7_2:64237687-64237706 | None:intergenic | 30.0% |
| ACTATCAATTACACCTGTTA+TGG | - | chr7_2:64237699-64237718 | Msa1068850:CDS | 30.0% | |
| TTTGATTCAATGTCCATAAC+AGG | + | chr7_2:64237715-64237734 | None:intergenic | 30.0% | |
| TTAATAGATGTGTCTCTGTA+AGG | + | chr7_2:64237791-64237810 | None:intergenic | 30.0% | |
| ACAGAGACACATCTATTAAT+AGG | - | chr7_2:64237792-64237811 | Msa1068850:intron | 30.0% | |
| TACATAGCAGAGATAATAAC+CGG | - | chr7_2:64237886-64237905 | Msa1068850:CDS | 30.0% | |
| TGCTATTATAAACTGTCTTC+AGG | - | chr7_2:64238027-64238046 | Msa1068850:CDS | 30.0% | |
| ! | TATTGGTGTTCAGAATGATA+AGG | - | chr7_2:64238133-64238152 | Msa1068850:CDS | 30.0% |
| AAAAGGATTATCTTGCATAC+CGG | + | chr7_2:64238188-64238207 | None:intergenic | 30.0% | |
| AATTATCGTTATGCAAGTTC+TGG | - | chr7_2:64238238-64238257 | Msa1068850:CDS | 30.0% | |
| TAGAAAAGACTACACAATGA+TGG | - | chr7_2:64238482-64238501 | Msa1068850:intron | 30.0% | |
| TTAAGTAACAACAAACAGCA+AGG | + | chr7_2:64238547-64238566 | None:intergenic | 30.0% | |
| ! | TCAGGTTGTTAATATTACTG+GGG | - | chr7_2:64238636-64238655 | Msa1068850:intron | 30.0% |
| ! | CAGTGATATGATGATGTATT+AGG | + | chr7_2:64238673-64238692 | None:intergenic | 30.0% |
| AGATGGATCAATTGAATCTA+GGG | + | chr7_2:64238862-64238881 | None:intergenic | 30.0% | |
| AAGATGGATCAATTGAATCT+AGG | + | chr7_2:64238863-64238882 | None:intergenic | 30.0% | |
| AGATTCAATTGATCCATCTT+TGG | - | chr7_2:64238863-64238882 | Msa1068850:intron | 30.0% | |
| TAAAATCCAATAGCCAAAGA+TGG | + | chr7_2:64238879-64238898 | None:intergenic | 30.0% | |
| ! | TAACTAGTTTAATTGTAGCG+AGG | - | chr7_2:64238932-64238951 | Msa1068850:intron | 30.0% |
| ! | AATTACTTGTGACTTGCATT+GGG | + | chr7_2:64239103-64239122 | None:intergenic | 30.0% |
| TTGAACTCATTGTGATTCTT+TGG | - | chr7_2:64239352-64239371 | Msa1068850:intron | 30.0% | |
| !! | TTGTTGATGAACCCTTTTAT+TGG | - | chr7_2:64239445-64239464 | Msa1068850:five_prime_UTR | 30.0% |
| CAATTCTGTAGCCAATAAAA+GGG | + | chr7_2:64239459-64239478 | None:intergenic | 30.0% | |
| ACAATTCTGTAGCCAATAAA+AGG | + | chr7_2:64239460-64239479 | None:intergenic | 30.0% | |
| TAGAGTAGTTCATATTGTGA+TGG | - | chr7_2:64239514-64239533 | Msa1068850:five_prime_UTR | 30.0% | |
| ! | ATCGTGAATTGTTGTTCTTC+AGG | + | chr7_2:64234923-64234942 | None:intergenic | 35.0% |
| ! | TTAACCTTTTCCATCAACGT+TGG | - | chr7_2:64235099-64235118 | Msa1068850:three_prime_UTR | 35.0% |
| ! | TAAACCAACGTTGATGGAAA+AGG | + | chr7_2:64235106-64235125 | None:intergenic | 35.0% |
| !!! | CACGAAAACTGTGTTTTTTC+AGG | - | chr7_2:64235676-64235695 | Msa1068850:intron | 35.0% |
| !!! | TGAGGATTTTAACTTGACCT+GGG | - | chr7_2:64235717-64235736 | Msa1068850:intron | 35.0% |
| ! | GCAGATTATGATGGCATTTT+AGG | - | chr7_2:64235872-64235891 | Msa1068850:intron | 35.0% |
| TGCAGATATTGACACAAACT+TGG | - | chr7_2:64236036-64236055 | Msa1068850:intron | 35.0% | |
| ! | GCCAAATTCTATGTTTTACG+TGG | - | chr7_2:64236072-64236091 | Msa1068850:intron | 35.0% |
| GCCACGTAAAACATAGAATT+TGG | + | chr7_2:64236076-64236095 | None:intergenic | 35.0% | |
| ! | TGTTTTACGTGGCTTCATAA+TGG | - | chr7_2:64236083-64236102 | Msa1068850:intron | 35.0% |
| ! | TGGCTTCATAATGGTATTGA+AGG | - | chr7_2:64236092-64236111 | Msa1068850:intron | 35.0% |
| !! | CGAGATTGTTGATAATACTC+AGG | - | chr7_2:64236164-64236183 | Msa1068850:intron | 35.0% |
| TAGTGATAGTAAGTTTCCCA+AGG | - | chr7_2:64236212-64236231 | Msa1068850:intron | 35.0% | |
| TGTAAAGAAGGTTGACCATA+AGG | + | chr7_2:64236241-64236260 | None:intergenic | 35.0% | |
| ACAGTTCATTCTCGAAATAG+TGG | - | chr7_2:64236318-64236337 | Msa1068850:CDS | 35.0% | |
| CAGTTCATTCTCGAAATAGT+GGG | - | chr7_2:64236319-64236338 | Msa1068850:CDS | 35.0% | |
| ATTTCACAGCATGAATCAAC+TGG | - | chr7_2:64236474-64236493 | Msa1068850:intron | 35.0% | |
| !! | TTGGTAGTGTTAGTTCGAAA+GGG | + | chr7_2:64236825-64236844 | None:intergenic | 35.0% |
| !! | ATTGGTAGTGTTAGTTCGAA+AGG | + | chr7_2:64236826-64236845 | None:intergenic | 35.0% |
| ATGGAGAAAATCTGTTGACA+AGG | - | chr7_2:64236894-64236913 | Msa1068850:intron | 35.0% | |
| GAAACAACGTAAATAGCCAT+TGG | + | chr7_2:64237263-64237282 | None:intergenic | 35.0% | |
| ! | ATGGCTATTTACGTTGTTTC+TGG | - | chr7_2:64237263-64237282 | Msa1068850:CDS | 35.0% |
| !! | AACGCTGTTTAGAGTTTTCA+AGG | - | chr7_2:64237342-64237361 | Msa1068850:intron | 35.0% |
| !! | ACGCTGTTTAGAGTTTTCAA+GGG | - | chr7_2:64237343-64237362 | Msa1068850:intron | 35.0% |
| AAAGGAACCAATAAAAGCAG+AGG | + | chr7_2:64237386-64237405 | None:intergenic | 35.0% | |
| !!! | TCTGCTTTTATTGGTTCCTT+TGG | - | chr7_2:64237385-64237404 | Msa1068850:intron | 35.0% |
| !! | TTATTGGTTCCTTTGGTTCT+TGG | - | chr7_2:64237392-64237411 | Msa1068850:intron | 35.0% |
| TTATCAAGTCCAAGAACCAA+AGG | + | chr7_2:64237404-64237423 | None:intergenic | 35.0% | |
| ! | TAAAGTCAATCTAAGGTGTG+TGG | - | chr7_2:64237421-64237440 | Msa1068850:intron | 35.0% |
| GTAAAAGAATCCAAATAGGC+AGG | + | chr7_2:64237527-64237546 | None:intergenic | 35.0% | |
| AAAGATAGAAACTTCCCTGT+CGG | - | chr7_2:64237732-64237751 | Msa1068850:CDS | 35.0% | |
| ! | ACATCGAAATTTTACCGACA+GGG | + | chr7_2:64237749-64237768 | None:intergenic | 35.0% |
| ! | AACATCGAAATTTTACCGAC+AGG | + | chr7_2:64237750-64237769 | None:intergenic | 35.0% |
| CTCTCGTGATGTAATATGAT+TGG | - | chr7_2:64237836-64237855 | Msa1068850:intron | 35.0% | |
| TTTAAATTTCCTCAGAGCCT+TGG | - | chr7_2:64238074-64238093 | Msa1068850:CDS | 35.0% | |
| AAACAGCAAGGAAACCAAAT+AGG | + | chr7_2:64238535-64238554 | None:intergenic | 35.0% | |
| ! | TGTTCAGACTGTTGTTTGAT+AGG | - | chr7_2:64238574-64238593 | Msa1068850:intron | 35.0% |
| GATGGATCAATTGAATCTAG+GGG | + | chr7_2:64238861-64238880 | None:intergenic | 35.0% | |
| ATTGATCCATCTTTGGCTAT+TGG | - | chr7_2:64238870-64238889 | Msa1068850:intron | 35.0% | |
| AAGCTTGCAGAAGAATCAAA+CGG | - | chr7_2:64239041-64239060 | Msa1068850:intron | 35.0% | |
| ! | GAATTACTTGTGACTTGCAT+TGG | + | chr7_2:64239104-64239123 | None:intergenic | 35.0% |
| ATGAACCTTGTTAATGATGC+AGG | - | chr7_2:64239170-64239189 | Msa1068850:intron | 35.0% | |
| CTGGCAATTCCTATAAATGT+CGG | - | chr7_2:64239208-64239227 | Msa1068850:intron | 35.0% | |
| TGGCAATTCCTATAAATGTC+GGG | - | chr7_2:64239209-64239228 | Msa1068850:intron | 35.0% | |
| TATTGTAGCCCGACATTTAT+AGG | + | chr7_2:64239220-64239239 | None:intergenic | 35.0% | |
| ATTTGTTCATATGGCTAACC+AGG | - | chr7_2:64239391-64239410 | Msa1068850:intron | 35.0% | |
| ! | TATTGGCTACAGAATTGTAG+TGG | - | chr7_2:64239462-64239481 | Msa1068850:five_prime_UTR | 35.0% |
| CTTTGGCAATGTCAAATAAG+TGG | - | chr7_2:64239491-64239510 | Msa1068850:five_prime_UTR | 35.0% | |
| !! | TTTCGTCGTTTTCGTTGCAA+AGG | - | chr7_2:64235073-64235092 | Msa1068850:three_prime_UTR | 40.0% |
| TGTCGTATGCTTCTGTTTAG+TGG | - | chr7_2:64235518-64235537 | Msa1068850:CDS | 40.0% | |
| !! | TCATGTAGGTTGACTTTTGC+CGG | + | chr7_2:64235566-64235585 | None:intergenic | 40.0% |
| TGTACTTCCAGAATCATGTC+TGG | + | chr7_2:64235645-64235664 | None:intergenic | 40.0% | |
| !!! | GTGAGGATTTTAACTTGACC+TGG | - | chr7_2:64235716-64235735 | Msa1068850:intron | 40.0% |
| !!! | TTTTAACTTGACCTGGGCTT+AGG | - | chr7_2:64235723-64235742 | Msa1068850:intron | 40.0% |
| !! | TTTAACTTGACCTGGGCTTA+GGG | - | chr7_2:64235724-64235743 | Msa1068850:intron | 40.0% |
| GCAACACAGAATAGTTCAAC+TGG | + | chr7_2:64235830-64235849 | None:intergenic | 40.0% | |
| TGGTCAACCTTCTTTACATC+TGG | - | chr7_2:64236243-64236262 | Msa1068850:CDS | 40.0% | |
| ! | TTCATTCTCGAAATAGTGGG+TGG | - | chr7_2:64236322-64236341 | Msa1068850:CDS | 40.0% |
| !! | TCATTCTCGAAATAGTGGGT+GGG | - | chr7_2:64236323-64236342 | Msa1068850:CDS | 40.0% |
| CAATTGCATCGAAGCCTATA+AGG | + | chr7_2:64236653-64236672 | None:intergenic | 40.0% | |
| GAAAATCTGTTGACAAGGTC+AGG | - | chr7_2:64236899-64236918 | Msa1068850:intron | 40.0% | |
| GCCTTTGTGTTGAGGTATAA+CGG | - | chr7_2:64236994-64237013 | Msa1068850:CDS | 40.0% | |
| TGTTGAGGTATAACGGCATT+AGG | - | chr7_2:64237001-64237020 | Msa1068850:CDS | 40.0% | |
| AACCTTCTTCAAGCTGGTAA+AGG | - | chr7_2:64237128-64237147 | Msa1068850:CDS | 40.0% | |
| AACCTTTACCAGCTTGAAGA+AGG | + | chr7_2:64237133-64237152 | None:intergenic | 40.0% | |
| CTTCAAGCTGGTAAAGGTTA+TGG | - | chr7_2:64237134-64237153 | Msa1068850:CDS | 40.0% | |
| AAAGGTTATGGTCTAGCTGT+TGG | - | chr7_2:64237146-64237165 | Msa1068850:CDS | 40.0% | |
| AAGGTTATGGTCTAGCTGTT+GGG | - | chr7_2:64237147-64237166 | Msa1068850:CDS | 40.0% | |
| ATATGCTATGTGTCGCACAT+GGG | - | chr7_2:64237184-64237203 | Msa1068850:CDS | 40.0% | |
| !!! | AAGTTTTAGCTCGAAACCAG+AGG | - | chr7_2:64237207-64237226 | Msa1068850:CDS | 40.0% |
| !!! | AGTTTTAGCTCGAAACCAGA+GGG | - | chr7_2:64237208-64237227 | Msa1068850:CDS | 40.0% |
| ACGTAAATAGCCATTGGAAG+TGG | + | chr7_2:64237257-64237276 | None:intergenic | 40.0% | |
| !! | GTTGTTTCTGGAGATGAAGA+CGG | - | chr7_2:64237275-64237294 | Msa1068850:CDS | 40.0% |
| AAACTCTAAACAGCGTTTGC+AGG | + | chr7_2:64237339-64237358 | None:intergenic | 40.0% | |
| !! | CGCTGTTTAGAGTTTTCAAG+GGG | - | chr7_2:64237344-64237363 | Msa1068850:intron | 40.0% |
| !! | AATAAAAGCAGAGGTGTCCA+AGG | + | chr7_2:64237377-64237396 | None:intergenic | 40.0% |
| !! | TTGGACACCTCTGCTTTTAT+TGG | - | chr7_2:64237376-64237395 | Msa1068850:intron | 40.0% |
| ! | TAAGGTGTGTGGCATTTTCA+AGG | - | chr7_2:64237432-64237451 | Msa1068850:intron | 40.0% |
| !! | GTGGCATTTTCAAGGTTCTA+TGG | - | chr7_2:64237440-64237459 | Msa1068850:intron | 40.0% |
| TAATGTGTTGCCTGCCTATT+TGG | - | chr7_2:64237514-64237533 | Msa1068850:CDS | 40.0% | |
| AGAGATAATAACCGGTGTGA+TGG | - | chr7_2:64237894-64237913 | Msa1068850:CDS | 40.0% | |
| ATTATGTGCATCCATCACAC+CGG | + | chr7_2:64237908-64237927 | None:intergenic | 40.0% | |
| ! | ATAATGTATGTCGAAGCACC+TGG | + | chr7_2:64238116-64238135 | None:intergenic | 40.0% |
| GGTGCTTCGACATACATTAT+TGG | - | chr7_2:64238116-64238135 | Msa1068850:CDS | 40.0% | |
| GCTTAACTTCATGTGGATCA+AGG | + | chr7_2:64238166-64238185 | None:intergenic | 40.0% | |
| TGATCCACATGAAGTTAAGC+CGG | - | chr7_2:64238166-64238185 | Msa1068850:CDS | 40.0% | |
| GCAAATGTGATAGCACTTAC+AGG | - | chr7_2:64238263-64238282 | Msa1068850:CDS | 40.0% | |
| CTAAGTACCAATATGAGCAC+CGG | - | chr7_2:64238348-64238367 | Msa1068850:five_prime_UTR | 40.0% | |
| TTTACAACCGGTGCTCATAT+TGG | + | chr7_2:64238358-64238377 | None:intergenic | 40.0% | |
| ATAACGGCAAACCTTTGTCT+CGG | + | chr7_2:64238905-64238924 | None:intergenic | 40.0% | |
| GACTGAGCTACAGTGAATAA+TGG | + | chr7_2:64239071-64239090 | None:intergenic | 40.0% | |
| TATTCACTGTAGCTCAGTCT+AGG | - | chr7_2:64239072-64239091 | Msa1068850:intron | 40.0% | |
| GTCACAAGTAATTCTGTGTC+AGG | - | chr7_2:64239110-64239129 | Msa1068850:intron | 40.0% | |
| TGACGACACTAGATTTGAAG+AGG | - | chr7_2:64239133-64239152 | Msa1068850:intron | 40.0% | |
| GAATTGCCAGTCATCTTCAT+TGG | + | chr7_2:64239198-64239217 | None:intergenic | 40.0% | |
| GCACTCTTCAAACGTTTAGT+AGG | - | chr7_2:64239318-64239337 | Msa1068850:intron | 40.0% | |
| TTCAGGTATGCGACTTCGTT+CGG | + | chr7_2:64234906-64234925 | None:intergenic | 45.0% | |
| !! | ATTGGTAGCGTACGTGGATA+AGG | + | chr7_2:64234982-64235001 | None:intergenic | 45.0% |
| GGCGTATAAACCAACGTTGA+TGG | + | chr7_2:64235112-64235131 | None:intergenic | 45.0% | |
| ATATAGGATACCAAAGGGGC+CGG | - | chr7_2:64235544-64235563 | Msa1068850:CDS | 45.0% | |
| ! | TCTGGAAGTACACATCCAGA+TGG | - | chr7_2:64235653-64235672 | Msa1068850:intron | 45.0% |
| ! | AACACAGTTTTCGTGCCATC+TGG | + | chr7_2:64235671-64235690 | None:intergenic | 45.0% |
| ! | TTAACTTGACCTGGGCTTAG+GGG | - | chr7_2:64235725-64235744 | Msa1068850:intron | 45.0% |
| !! | TCAAGTTGGACTTCGAGTCA+AGG | - | chr7_2:64235771-64235790 | Msa1068850:intron | 45.0% |
| ! | CAAGTTGGACTTCGAGTCAA+GGG | - | chr7_2:64235772-64235791 | Msa1068850:intron | 45.0% |
| AAGTTGGACTTCGAGTCAAG+GGG | - | chr7_2:64235773-64235792 | Msa1068850:intron | 45.0% | |
| AGTTTCCCAAGGCTTCCTTA+TGG | - | chr7_2:64236223-64236242 | Msa1068850:intron | 45.0% | |
| GTTGACCATAAGGAAGCCTT+GGG | + | chr7_2:64236231-64236250 | None:intergenic | 45.0% | |
| CGGTTCAATGAGGAGATTTC+AGG | - | chr7_2:64236374-64236393 | Msa1068850:intron | 45.0% | |
| ! | AGATTTCAGGAGCGTGTACT+AGG | - | chr7_2:64236387-64236406 | Msa1068850:intron | 45.0% |
| ! | GATTTCAGGAGCGTGTACTA+GGG | - | chr7_2:64236388-64236407 | Msa1068850:intron | 45.0% |
| ! | ACTGACGTTTCAAGCTCTGA+TGG | - | chr7_2:64236420-64236439 | Msa1068850:intron | 45.0% |
| ! | CAAGCTCTGATGGCGATATA+TGG | - | chr7_2:64236430-64236449 | Msa1068850:intron | 45.0% |
| GATGGCGATATATGGCTTCT+AGG | - | chr7_2:64236438-64236457 | Msa1068850:intron | 45.0% | |
| GCCGTTATACCTCAACACAA+AGG | + | chr7_2:64236998-64237017 | None:intergenic | 45.0% | |
| ! | GCAACTATTTGGTGATTCCG+AGG | - | chr7_2:64237085-64237104 | Msa1068850:CDS | 45.0% |
| ! | ACTATTTGGTGATTCCGAGG+CGG | - | chr7_2:64237088-64237107 | Msa1068850:CDS | 45.0% |
| ATCCACAACCTTCTTCAAGC+TGG | - | chr7_2:64237122-64237141 | Msa1068850:CDS | 45.0% | |
| TACCAGCTTGAAGAAGGTTG+TGG | + | chr7_2:64237127-64237146 | None:intergenic | 45.0% | |
| CATGTGCGACACATAGCATA+TGG | + | chr7_2:64237185-64237204 | None:intergenic | 45.0% | |
| CATATGCTATGTGTCGCACA+TGG | - | chr7_2:64237183-64237202 | Msa1068850:CDS | 45.0% | |
| GCATCTTCAATGCAGACAAC+TGG | + | chr7_2:64237317-64237336 | None:intergenic | 45.0% | |
| ! | GTTTTCCTCCCAAGATTCCA+AGG | + | chr7_2:64238094-64238113 | None:intergenic | 45.0% |
| !! | CATACCGGCTTAACTTCATG+TGG | + | chr7_2:64238173-64238192 | None:intergenic | 45.0% |
| ACACAATGATGGCCTAGTAG+TGG | - | chr7_2:64238493-64238512 | Msa1068850:intron | 45.0% | |
| AATGATGGCCTAGTAGTGGT+TGG | - | chr7_2:64238497-64238516 | Msa1068850:intron | 45.0% | |
| ATGATGGCCTAGTAGTGGTT+GGG | - | chr7_2:64238498-64238517 | Msa1068850:intron | 45.0% | |
| GGGAGGAGTGAAATCCTATT+TGG | - | chr7_2:64238518-64238537 | Msa1068850:intron | 45.0% | |
| TTTATGCTGACCCCCTTTAG+TGG | - | chr7_2:64238766-64238785 | Msa1068850:intron | 45.0% | |
| TTATGCTGACCCCCTTTAGT+GGG | - | chr7_2:64238767-64238786 | Msa1068850:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAAGG+GGG | + | chr7_2:64238779-64238798 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAAG+GGG | + | chr7_2:64238780-64238799 | None:intergenic | 45.0% |
| ! | CCAAGCCTTATCCCACTAAA+GGG | + | chr7_2:64238781-64238800 | None:intergenic | 45.0% |
| ! | ACCAAGCCTTATCCCACTAA+AGG | + | chr7_2:64238782-64238801 | None:intergenic | 45.0% |
| AGACTCCTAACAGCATTAGC+AGG | - | chr7_2:64238829-64238848 | Msa1068850:intron | 45.0% | |
| ATGTGCCTGCTAATGCTGTT+AGG | + | chr7_2:64238837-64238856 | None:intergenic | 45.0% | |
| ! | GGATTTTACTGCCGAGACAA+AGG | - | chr7_2:64238891-64238910 | Msa1068850:intron | 45.0% |
| TTCTGCAAGCTTAGTTGCTC+GGG | + | chr7_2:64239033-64239052 | None:intergenic | 45.0% | |
| CTTCTGCAAGCTTAGTTGCT+CGG | + | chr7_2:64239034-64239053 | None:intergenic | 45.0% | |
| TGGTGCCTGCATCATTAACA+AGG | + | chr7_2:64239178-64239197 | None:intergenic | 45.0% | |
| TTGTTTACCACTGCCGAGTT+CGG | - | chr7_2:64239274-64239293 | Msa1068850:intron | 45.0% | |
| AGTCAAGCATCAACCGAACT+CGG | + | chr7_2:64239290-64239309 | None:intergenic | 45.0% | |
| !! | TAAGGGATTGGTAGCGTACG+TGG | + | chr7_2:64234988-64235007 | None:intergenic | 50.0% |
| GCGAGGGATGATCATCAAGT+TGG | - | chr7_2:64235757-64235776 | Msa1068850:intron | 50.0% | |
| AGTTGGACTTCGAGTCAAGG+GGG | - | chr7_2:64235774-64235793 | Msa1068850:intron | 50.0% | |
| GGGGGATGGAAAGTCTCATT+TGG | - | chr7_2:64235794-64235813 | Msa1068850:intron | 50.0% | |
| ! | ACTAGACCCTGCCTTTGAAG+AGG | + | chr7_2:64236196-64236215 | None:intergenic | 50.0% |
| GGTTGACCATAAGGAAGCCT+TGG | + | chr7_2:64236232-64236251 | None:intergenic | 50.0% | |
| GCTGTGAGGAAAGTCGTTAG+TGG | - | chr7_2:64236351-64236370 | Msa1068850:intron | 50.0% | |
| GTGAGGAAAGTCGTTAGTGG+CGG | - | chr7_2:64236354-64236373 | Msa1068850:intron | 50.0% | |
| TCGTTAGTGGCGGTTCAATG+AGG | - | chr7_2:64236364-64236383 | Msa1068850:intron | 50.0% | |
| ! | CAGTCAGATGCTTGTTGCTC+AGG | - | chr7_2:64236722-64236741 | Msa1068850:intron | 50.0% |
| GTGTTTGCGCCTTTGTGTTG+AGG | - | chr7_2:64236986-64237005 | Msa1068850:CDS | 50.0% | |
| GATAGAAAAAGCAGCCGCCT+CGG | + | chr7_2:64237105-64237124 | None:intergenic | 50.0% | |
| ATGGTCTAGCTGTTGGGTCA+TGG | - | chr7_2:64237153-64237172 | Msa1068850:CDS | 50.0% | |
| TGGTCTAGCTGTTGGGTCAT+GGG | - | chr7_2:64237154-64237173 | Msa1068850:CDS | 50.0% | |
| CTTGCTCATTCTTCTCCCTC+TGG | + | chr7_2:64237226-64237245 | None:intergenic | 50.0% | |
| CAGAGGGAGAAGAATGAGCA+AGG | - | chr7_2:64237224-64237243 | Msa1068850:CDS | 50.0% | |
| ! | AGGAGAACTGCCACTTCCAA+TGG | - | chr7_2:64237244-64237263 | Msa1068850:CDS | 50.0% |
| TTTCAAGGGGCCTAGTTCCT+TGG | - | chr7_2:64237357-64237376 | Msa1068850:intron | 50.0% | |
| GTGTCTCTGTAAGGCAGATG+AGG | + | chr7_2:64237782-64237801 | None:intergenic | 50.0% | |
| TCCTCAGAGCCTTGGAATCT+TGG | - | chr7_2:64238082-64238101 | Msa1068850:CDS | 50.0% | |
| CCTCAGAGCCTTGGAATCTT+GGG | - | chr7_2:64238083-64238102 | Msa1068850:CDS | 50.0% | |
| GGAATCTTGGGAGGAAAACC+AGG | - | chr7_2:64238095-64238114 | Msa1068850:CDS | 50.0% | |
| TGACCCCCTTTAGTGGGATA+AGG | - | chr7_2:64238773-64238792 | Msa1068850:intron | 50.0% | |
| CCCTTTAGTGGGATAAGGCT+TGG | - | chr7_2:64238778-64238797 | Msa1068850:intron | 50.0% | |
| CAGGCACCAATGAAGATGAC+TGG | - | chr7_2:64239189-64239208 | Msa1068850:intron | 50.0% | |
| ! | TTGACTTTTGCCGGCCCCTT+TGG | + | chr7_2:64235557-64235576 | None:intergenic | 55.0% |
| ! | CCTGGGCTTAGGGGATTTTG+CGG | - | chr7_2:64235734-64235753 | Msa1068850:intron | 55.0% |
| ! | CTGGGCTTAGGGGATTTTGC+GGG | - | chr7_2:64235735-64235754 | Msa1068850:intron | 55.0% |
| ! | TTAGGGGATTTTGCGGGCGA+GGG | - | chr7_2:64235741-64235760 | Msa1068850:intron | 55.0% |
| GTTGGACTTCGAGTCAAGGG+GGG | - | chr7_2:64235775-64235794 | Msa1068850:intron | 55.0% | |
| TTGGACTTCGAGTCAAGGGG+GGG | - | chr7_2:64235776-64235795 | Msa1068850:intron | 55.0% | |
| ! | AGACCCTGCCTTTGAAGAGG+CGG | + | chr7_2:64236193-64236212 | None:intergenic | 55.0% |
| AGCGTGTACTAGGGTCATGC+AGG | - | chr7_2:64236397-64236416 | Msa1068850:intron | 55.0% | |
| TCTAGCTGTTGGGTCATGGG+TGG | - | chr7_2:64237157-64237176 | Msa1068850:CDS | 55.0% | |
| CTAGCTGTTGGGTCATGGGT+GGG | - | chr7_2:64237158-64237177 | Msa1068850:CDS | 55.0% | |
| TAGCTGTTGGGTCATGGGTG+GGG | - | chr7_2:64237159-64237178 | Msa1068850:CDS | 55.0% | |
| !! | GCAGAGGTGTCCAAGGAACT+AGG | + | chr7_2:64237370-64237389 | None:intergenic | 55.0% |
| CCCAAGATTCCAAGGCTCTG+AGG | + | chr7_2:64238086-64238105 | None:intergenic | 55.0% | |
| CAGAGCCTTGGAATCTTGGG+AGG | - | chr7_2:64238086-64238105 | Msa1068850:CDS | 55.0% | |
| ATGGCCTAGTAGTGGTTGGG+AGG | - | chr7_2:64238501-64238520 | Msa1068850:intron | 55.0% | |
| CACTCCTCCCAACCACTACT+AGG | + | chr7_2:64238508-64238527 | None:intergenic | 55.0% | |
| CCGCAAAATCCCCTAAGCCC+AGG | + | chr7_2:64235737-64235756 | None:intergenic | 60.0% | |
| ! | CTTAGGGGATTTTGCGGGCG+AGG | - | chr7_2:64235740-64235759 | Msa1068850:intron | 60.0% |
| ACTTCGAGTCAAGGGGGGGA+TGG | - | chr7_2:64235780-64235799 | Msa1068850:intron | 60.0% | |
| TCAGGTGCCCGCCTCTTCAA+AGG | - | chr7_2:64236182-64236201 | Msa1068850:intron | 60.0% | |
| TGCCCGCCTCTTCAAAGGCA+GGG | - | chr7_2:64236187-64236206 | Msa1068850:intron | 60.0% | |
| ! | GACCCTGCCTTTGAAGAGGC+GGG | + | chr7_2:64236192-64236211 | None:intergenic | 60.0% |
| GGAGATGAAGACGGAGAGCG+AGG | - | chr7_2:64237284-64237303 | Msa1068850:CDS | 60.0% | |
| GATGAAGACGGAGAGCGAGG+TGG | - | chr7_2:64237287-64237306 | Msa1068850:CDS | 60.0% | |
| GCATCAACCGAACTCGGCAG+TGG | + | chr7_2:64239284-64239303 | None:intergenic | 60.0% | |
| GTGCCCGCCTCTTCAAAGGC+AGG | - | chr7_2:64236186-64236205 | Msa1068850:intron | 65.0% | |
| GTGGGTGGGCAGCTGCTGTG+AGG | - | chr7_2:64236337-64236356 | Msa1068850:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 64234830 | 64239582 | 64234830 | ID=Msa1068850;Name=Msa1068850 |
| chr7_2 | mRNA | 64234830 | 64239582 | 64234830 | ID=Msa1068850-mRNA-1;Parent=Msa1068850;Name=Msa1068850-mRNA-1;_AED=0.10;_eAED=0.10;_QI=220|0.85|0.87|1|0.85|0.75|8|359|474 |
| chr7_2 | exon | 64234830 | 64235403 | 64234830 | ID=Msa1068850-mRNA-1:exon:13335;Parent=Msa1068850-mRNA-1 |
| chr7_2 | exon | 64235500 | 64235581 | 64235500 | ID=Msa1068850-mRNA-1:exon:13334;Parent=Msa1068850-mRNA-1 |
| chr7_2 | exon | 64236225 | 64236363 | 64236225 | ID=Msa1068850-mRNA-1:exon:13333;Parent=Msa1068850-mRNA-1 |
| chr7_2 | exon | 64236977 | 64237356 | 64236977 | ID=Msa1068850-mRNA-1:exon:13332;Parent=Msa1068850-mRNA-1 |
| chr7_2 | exon | 64237497 | 64237547 | 64237497 | ID=Msa1068850-mRNA-1:exon:13331;Parent=Msa1068850-mRNA-1 |
| chr7_2 | exon | 64237669 | 64237754 | 64237669 | ID=Msa1068850-mRNA-1:exon:13330;Parent=Msa1068850-mRNA-1 |
| chr7_2 | exon | 64237839 | 64238371 | 64237839 | ID=Msa1068850-mRNA-1:exon:13329;Parent=Msa1068850-mRNA-1 |
| chr7_2 | exon | 64239424 | 64239582 | 64239424 | ID=Msa1068850-mRNA-1:exon:13328;Parent=Msa1068850-mRNA-1 |
| chr7_2 | five_prime_UTR | 64239424 | 64239582 | 64239424 | ID=Msa1068850-mRNA-1:five_prime_utr;Parent=Msa1068850-mRNA-1 |
| chr7_2 | five_prime_UTR | 64238311 | 64238371 | 64238311 | ID=Msa1068850-mRNA-1:five_prime_utr;Parent=Msa1068850-mRNA-1 |
| chr7_2 | CDS | 64237839 | 64238310 | 64237839 | ID=Msa1068850-mRNA-1:cds;Parent=Msa1068850-mRNA-1 |
| chr7_2 | CDS | 64237669 | 64237754 | 64237669 | ID=Msa1068850-mRNA-1:cds;Parent=Msa1068850-mRNA-1 |
| chr7_2 | CDS | 64237497 | 64237547 | 64237497 | ID=Msa1068850-mRNA-1:cds;Parent=Msa1068850-mRNA-1 |
| chr7_2 | CDS | 64236977 | 64237356 | 64236977 | ID=Msa1068850-mRNA-1:cds;Parent=Msa1068850-mRNA-1 |
| chr7_2 | CDS | 64236225 | 64236363 | 64236225 | ID=Msa1068850-mRNA-1:cds;Parent=Msa1068850-mRNA-1 |
| chr7_2 | CDS | 64235500 | 64235581 | 64235500 | ID=Msa1068850-mRNA-1:cds;Parent=Msa1068850-mRNA-1 |
| chr7_2 | CDS | 64235189 | 64235403 | 64235189 | ID=Msa1068850-mRNA-1:cds;Parent=Msa1068850-mRNA-1 |
| chr7_2 | three_prime_UTR | 64234830 | 64235188 | 64234830 | ID=Msa1068850-mRNA-1:three_prime_utr;Parent=Msa1068850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
