Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156630 | XP_003624282.1 | 94.683 | 489 | 9 | 3 | 1 | 474 | 1 | 487 | 0.0 | 938 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156630 | sp|A2Q1V6|ATG4_MEDTR | 94.683 | 489 | 9 | 3 | 1 | 474 | 1 | 487 | 0.0 | 938 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156630 | G7KTD2 | 94.683 | 489 | 9 | 3 | 1 | 474 | 1 | 487 | 0.0 | 938 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0667770 | Msa1156630 | 0.826745 | 2.291448e-54 | -8.615850e-47 |
| Msa0667790 | Msa1156630 | 0.806403 | 8.368530e-50 | -8.615850e-47 |
| Msa0763920 | Msa1156630 | 0.804890 | 1.738422e-49 | -8.615850e-47 |
| Msa1029740 | Msa1156630 | 0.889803 | 1.746699e-73 | -8.615850e-47 |
| Msa1068850 | Msa1156630 | 0.912910 | 1.132839e-83 | -8.615850e-47 |
| Msa1156630 | Msa1207310 | 0.806653 | 7.409166e-50 | -8.615850e-47 |
| Msa1156630 | Msa1337480 | 0.800190 | 1.619114e-48 | -8.615850e-47 |
| Msa1156630 | Msa1376130 | 0.807357 | 5.257900e-50 | -8.615850e-47 |
| Msa1156630 | Msa1428780 | 0.812928 | 3.311925e-51 | -8.615850e-47 |
| Msa0485490 | Msa1156630 | 0.806205 | 9.211152e-50 | -8.615850e-47 |
| Msa0566750 | Msa1156630 | 0.800513 | 1.391145e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156630 | MtrunA17_Chr7g0250241 | 87.730 | 489 | 10 | 3 | 1 | 474 | 1 | 454 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156630 | AT2G44140.1 | 60.179 | 447 | 157 | 7 | 3 | 433 | 1 | 442 | 0.0 | 546 |
| Msa1156630 | AT2G44140.3 | 60.179 | 447 | 157 | 7 | 3 | 433 | 1 | 442 | 0.0 | 546 |
| Msa1156630 | AT2G44140.2 | 62.694 | 386 | 126 | 5 | 64 | 433 | 14 | 397 | 1.46e-177 | 504 |
| Msa1156630 | AT2G44140.4 | 63.889 | 360 | 114 | 3 | 89 | 433 | 1 | 359 | 7.05e-172 | 488 |
| Msa1156630 | AT2G44140.5 | 60.428 | 374 | 142 | 5 | 3 | 375 | 1 | 369 | 4.89e-163 | 466 |
| Msa1156630 | AT3G59950.1 | 56.823 | 447 | 174 | 5 | 3 | 432 | 1 | 445 | 6.38e-163 | 469 |
| Msa1156630 | AT3G59950.4 | 63.231 | 359 | 117 | 1 | 89 | 432 | 1 | 359 | 5.82e-159 | 456 |
| Msa1156630 | AT3G59950.5 | 57.979 | 376 | 152 | 5 | 3 | 375 | 1 | 373 | 7.48e-137 | 400 |
| Msa1156630 | AT3G59950.2 | 54.573 | 328 | 145 | 4 | 3 | 328 | 1 | 326 | 1.11e-105 | 319 |
| Msa1156630 | AT3G59950.3 | 62.602 | 246 | 92 | 0 | 89 | 334 | 1 | 246 | 1.87e-104 | 312 |
Find 136 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGCTATTTACGTTGTTTC+TGG | 0.136184 | 7_4:-45007441 | Msa1156630:CDS |
| AGAGAATGATGAAGAAATTT+TGG | 0.165836 | 7_4:+45009762 | None:intergenic |
| TTATTGGTTCCTTTGGTTCT+TGG | 0.168245 | 7_4:-45007312 | Msa1156630:CDS |
| TATTGTAGCCCGACATTTAT+AGG | 0.173191 | 7_4:+45005487 | None:intergenic |
| ACAATTCTGTAGCCAATAAA+AGG | 0.199002 | 7_4:+45005247 | None:intergenic |
| AGTATACTAGTGATGTTAAT+TGG | 0.200002 | 7_4:-45008022 | Msa1156630:CDS |
| ATTGACATCTTGCAACTATT+TGG | 0.209877 | 7_4:-45007630 | Msa1156630:CDS |
| TTGAACTCATTGTGATTCTT+TGG | 0.224858 | 7_4:-45005352 | Msa1156630:three_prime_UTR |
| CGGTTCAATGAGGAGATTTC+AGG | 0.252524 | 7_4:-45008330 | Msa1156630:CDS |
| GCCACGTAAAACATAGAATT+TGG | 0.253924 | 7_4:+45008631 | None:intergenic |
| ATTGATCCATCTTTGGCTAT+TGG | 0.271467 | 7_4:-45005834 | Msa1156630:CDS |
| AGATTCAATTGATCCATCTT+TGG | 0.287046 | 7_4:-45005841 | Msa1156630:CDS |
| TCCTCAGAGCCTTGGAATCT+TGG | 0.287759 | 7_4:-45006622 | Msa1156630:CDS |
| TTAAAAGTTGACTGCAATAA+AGG | 0.294600 | 7_4:+45006648 | None:intergenic |
| TGTTTACTCATTTGTTCATA+TGG | 0.297579 | 7_4:-45005322 | Msa1156630:three_prime_UTR |
| CTTCAAGCTGGTAAAGGTTA+TGG | 0.328585 | 7_4:-45007570 | Msa1156630:CDS |
| TGGTCAACCTTCTTTACATC+TGG | 0.335280 | 7_4:-45008461 | Msa1156630:CDS |
| GGTGCTTCGACATACATTAT+TGG | 0.338715 | 7_4:-45006588 | Msa1156630:CDS |
| CCTCAGAGCCTTGGAATCTT+GGG | 0.343448 | 7_4:-45006621 | Msa1156630:CDS |
| CAAGCTCTGATGGCGATATA+TGG | 0.346988 | 7_4:-45008274 | Msa1156630:CDS |
| TTCAGGTATGCGACTTCGTT+CGG | 0.357924 | 7_4:+45009802 | None:intergenic |
| CTAGCTGTTGGGTCATGGGT+GGG | 0.361496 | 7_4:-45007546 | Msa1156630:CDS |
| AAGATGGATCAATTGAATCT+AGG | 0.366440 | 7_4:+45005844 | None:intergenic |
| CTTGCTCATTCTTCTCCCTC+TGG | 0.367196 | 7_4:+45007481 | None:intergenic |
| ATCGTGAATTGTTGTTGTTC+AGG | 0.368455 | 7_4:+45009785 | None:intergenic |
| ATGGTCTAGCTGTTGGGTCA+TGG | 0.369139 | 7_4:-45007551 | Msa1156630:CDS |
| GATGGCGATATATGGCTTCT+AGG | 0.371719 | 7_4:-45008266 | Msa1156630:CDS |
| GTATACTAGTGATGTTAATT+GGG | 0.374403 | 7_4:-45008021 | Msa1156630:CDS |
| AGATTTCAGGAGCGTGTACT+AGG | 0.390219 | 7_4:-45008317 | Msa1156630:CDS |
| AAACTCTAAACAGCGTTTGC+AGG | 0.391047 | 7_4:+45007368 | None:intergenic |
| TGGTCTAGCTGTTGGGTCAT+GGG | 0.397135 | 7_4:-45007550 | Msa1156630:CDS |
| CAGTCAGATGCTTGTTGCTC+AGG | 0.397178 | 7_4:-45007982 | Msa1156630:intron |
| TTTAAATTTCCTCAGAGCCT+TGG | 0.405739 | 7_4:-45006630 | Msa1156630:CDS |
| ATGTGCCTGCTAATGCTGTT+AGG | 0.412532 | 7_4:+45005870 | None:intergenic |
| TTCACAAATTAGGTAGATCA+TGG | 0.414869 | 7_4:-45007829 | Msa1156630:CDS |
| TTTCAAGGGGCCTAGTTCCT+TGG | 0.415808 | 7_4:-45007347 | Msa1156630:CDS |
| GCACTCTTCAAACGTTTAGT+AGG | 0.419679 | 7_4:-45005386 | Msa1156630:three_prime_UTR |
| GACTTGATAAAGTCAATCTA+AGG | 0.424719 | 7_4:-45007290 | Msa1156630:intron |
| TAGCTGTTGGGTCATGGGTG+GGG | 0.425413 | 7_4:-45007545 | Msa1156630:CDS |
| AGTTTCCCAAGGCTTCCTTA+TGG | 0.427428 | 7_4:-45008481 | Msa1156630:CDS |
| ACAGTTCATTCTCGAAATAG+TGG | 0.430178 | 7_4:-45008386 | Msa1156630:CDS |
| AGATGGATCAATTGAATCTA+GGG | 0.433513 | 7_4:+45005845 | None:intergenic |
| TATTGAAGGATTTATGTGAT+AGG | 0.437062 | 7_4:-45008598 | Msa1156630:CDS |
| ATTTCACAGCATGAATCAAC+TGG | 0.438381 | 7_4:-45008230 | Msa1156630:CDS |
| AAAGGTTATGGTCTAGCTGT+TGG | 0.438899 | 7_4:-45007558 | Msa1156630:CDS |
| TTCTGCAAGCTTAGTTGCTC+GGG | 0.438986 | 7_4:+45005674 | None:intergenic |
| TGTAAAGAAGGTTGACCATA+AGG | 0.441752 | 7_4:+45008466 | None:intergenic |
| ATTGGTAGCGTACGTGGATA+AGG | 0.442501 | 7_4:+45009726 | None:intergenic |
| GAATTGCCAGTCATCTTCAT+TGG | 0.444109 | 7_4:+45005509 | None:intergenic |
| TTGTTTACCACTGCCGAGTT+CGG | 0.446268 | 7_4:-45005430 | Msa1156630:three_prime_UTR |
| GAATTACTTGTGACTTGCAT+TGG | 0.451605 | 7_4:+45005603 | None:intergenic |
| GCATCTTCAATGCAGACAAC+TGG | 0.452358 | 7_4:+45007390 | None:intergenic |
| AATTGTAGTGGATATTACTT+TGG | 0.452497 | 7_4:-45005230 | Msa1156630:three_prime_UTR |
| TGCAGATATTGACACAAACT+TGG | 0.453753 | 7_4:-45008668 | Msa1156630:intron |
| GACTGAGCTACAGTGAATAA+TGG | 0.459266 | 7_4:+45005636 | None:intergenic |
| AACCTTCTTCAAGCTGGTAA+AGG | 0.461307 | 7_4:-45007576 | Msa1156630:CDS |
| GTCACAAGTAATTCTGTGTC+AGG | 0.467454 | 7_4:-45005594 | Msa1156630:CDS |
| AATTACTTGTGACTTGCATT+GGG | 0.467885 | 7_4:+45005604 | None:intergenic |
| TCAATATATTCTTTATCCAC+TGG | 0.468590 | 7_4:+45007648 | None:intergenic |
| AACCTTTACCAGCTTGAAGA+AGG | 0.471470 | 7_4:+45007574 | None:intergenic |
| TGGCTTCATAATGGTATTGA+AGG | 0.475033 | 7_4:-45008612 | Msa1156630:exon |
| CTTCTGCAAGCTTAGTTGCT+CGG | 0.477017 | 7_4:+45005673 | None:intergenic |
| GGTTGACCATAAGGAAGCCT+TGG | 0.480154 | 7_4:+45008475 | None:intergenic |
| GTGCCCGCCTCTTCAAAGGC+AGG | 0.484347 | 7_4:-45008518 | Msa1156630:CDS |
| TCTAGCTGTTGGGTCATGGG+TGG | 0.486738 | 7_4:-45007547 | Msa1156630:CDS |
| CTTTGGCAATGTCAAATAAG+TGG | 0.491327 | 7_4:-45005213 | Msa1156630:three_prime_UTR |
| CATGTGCGACACATAGCATA+TGG | 0.492479 | 7_4:+45007522 | None:intergenic |
| TACCAGCTTGAAGAAGGTTG+TGG | 0.493797 | 7_4:+45007580 | None:intergenic |
| TATTGGTGTTCAGAATGATA+AGG | 0.494330 | 7_4:-45006571 | Msa1156630:CDS |
| TAAAATCCAATAGCCAAAGA+TGG | 0.496148 | 7_4:+45005828 | None:intergenic |
| AAGGTTATGGTCTAGCTGTT+GGG | 0.496723 | 7_4:-45007557 | Msa1156630:CDS |
| TGGCAATTCCTATAAATGTC+GGG | 0.498592 | 7_4:-45005495 | Msa1156630:exon |
| ATGAACCTTGTTAATGATGC+AGG | 0.501355 | 7_4:-45005534 | Msa1156630:CDS |
| CATATGCTATGTGTCGCACA+TGG | 0.515009 | 7_4:-45007521 | Msa1156630:CDS |
| ATCCACAACCTTCTTCAAGC+TGG | 0.518114 | 7_4:-45007582 | Msa1156630:CDS |
| GCAGAGGTGTCCAAGGAACT+AGG | 0.518806 | 7_4:+45007337 | None:intergenic |
| GAAACAACGTAAATAGCCAT+TGG | 0.522414 | 7_4:+45007444 | None:intergenic |
| ACGTAAATAGCCATTGGAAG+TGG | 0.527082 | 7_4:+45007450 | None:intergenic |
| GGAATCTTGGGAGGAAAACC+AGG | 0.527113 | 7_4:-45006609 | Msa1156630:CDS |
| GTTGACCATAAGGAAGCCTT+GGG | 0.529980 | 7_4:+45008476 | None:intergenic |
| GCTACAATATGAATTAAGTA+AGG | 0.537034 | 7_4:-45005473 | Msa1156630:three_prime_UTR |
| TGCCCGCCTCTTCAAAGGCA+GGG | 0.539052 | 7_4:-45008517 | Msa1156630:CDS |
| GACCCTGCCTTTGAAGAGGC+GGG | 0.540202 | 7_4:+45008515 | None:intergenic |
| TCAGGTGCCCGCCTCTTCAA+AGG | 0.542478 | 7_4:-45008522 | Msa1156630:CDS |
| TATACTAGTGATGTTAATTG+GGG | 0.543594 | 7_4:-45008020 | Msa1156630:CDS |
| CAATTCTGTAGCCAATAAAA+GGG | 0.545788 | 7_4:+45005248 | None:intergenic |
| CTGAGTATTATCAACAATCT+CGG | 0.546723 | 7_4:+45008541 | None:intergenic |
| GCTTAACTTCATGTGGATCA+AGG | 0.546867 | 7_4:+45006541 | None:intergenic |
| CTGGCAATTCCTATAAATGT+CGG | 0.547592 | 7_4:-45005496 | Msa1156630:exon |
| ATACATTTAACAGACCTTTG+CGG | 0.548501 | 7_4:+45008138 | None:intergenic |
| TATTCACTGTAGCTCAGTCT+AGG | 0.548706 | 7_4:-45005632 | Msa1156630:CDS |
| GCTGTGAGGAAAGTCGTTAG+TGG | 0.549234 | 7_4:-45008353 | Msa1156630:CDS |
| AGTCAAGCATCAACCGAACT+CGG | 0.552985 | 7_4:+45005417 | None:intergenic |
| AGGAGAACTGCCACTTCCAA+TGG | 0.553512 | 7_4:-45007460 | Msa1156630:CDS |
| ATTTGTTCATATGGCTAACC+AGG | 0.555159 | 7_4:-45005313 | Msa1156630:three_prime_UTR |
| AGACTCCTAACAGCATTAGC+AGG | 0.560789 | 7_4:-45005875 | Msa1156630:CDS |
| AGCGTGTACTAGGGTCATGC+AGG | 0.568179 | 7_4:-45008307 | Msa1156630:CDS |
| CAGGCACCAATGAAGATGAC+TGG | 0.568826 | 7_4:-45005515 | Msa1156630:CDS |
| ACTGACGTTTCAAGCTCTGA+TGG | 0.572355 | 7_4:-45008284 | Msa1156630:CDS |
| TATTGGCTACAGAATTGTAG+TGG | 0.572874 | 7_4:-45005242 | Msa1156630:three_prime_UTR |
| GCATCAACCGAACTCGGCAG+TGG | 0.577325 | 7_4:+45005423 | None:intergenic |
| GCAACTATTTGGTGATTCCG+AGG | 0.577389 | 7_4:-45007619 | Msa1156630:CDS |
| GTTGTTTCTGGAGATGAAGA+CGG | 0.579696 | 7_4:-45007429 | Msa1156630:CDS |
| CGAGATTGTTGATAATACTC+AGG | 0.584823 | 7_4:-45008540 | Msa1156630:CDS |
| AATAAAAGCAGAGGTGTCCA+AGG | 0.588980 | 7_4:+45007330 | None:intergenic |
| TTCATTCTCGAAATAGTGGG+TGG | 0.591536 | 7_4:-45008382 | Msa1156630:CDS |
| TAGAGTAGTTCATATTGTGA+TGG | 0.592290 | 7_4:-45005190 | Msa1156630:three_prime_UTR |
| GATTTCAGGAGCGTGTACTA+GGG | 0.594031 | 7_4:-45008316 | Msa1156630:CDS |
| TGATCCACATGAAGTTAAGC+CGG | 0.594832 | 7_4:-45006538 | Msa1156630:intron |
| CAGTTCATTCTCGAAATAGT+GGG | 0.596526 | 7_4:-45008385 | Msa1156630:CDS |
| ATAACGGCAAACCTTTGTCT+CGG | 0.597389 | 7_4:+45005802 | None:intergenic |
| TGGTGCCTGCATCATTAACA+AGG | 0.600444 | 7_4:+45005529 | None:intergenic |
| TAGTGATAGTAAGTTTCCCA+AGG | 0.604554 | 7_4:-45008492 | Msa1156630:CDS |
| CAGAGCCTTGGAATCTTGGG+AGG | 0.606666 | 7_4:-45006618 | Msa1156630:CDS |
| CCCAAGATTCCAAGGCTCTG+AGG | 0.607877 | 7_4:+45006621 | None:intergenic |
| AAGCTTGCAGAAGAATCAAA+CGG | 0.608695 | 7_4:-45005663 | Msa1156630:CDS |
| CAGAGGGAGAAGAATGAGCA+AGG | 0.610636 | 7_4:-45007480 | Msa1156630:CDS |
| AGACCCTGCCTTTGAAGAGG+CGG | 0.611555 | 7_4:+45008514 | None:intergenic |
| TGACGACACTAGATTTGAAG+AGG | 0.616064 | 7_4:-45005571 | Msa1156630:CDS |
| ACTAGACCCTGCCTTTGAAG+AGG | 0.621051 | 7_4:+45008511 | None:intergenic |
| CATACCGGCTTAACTTCATG+TGG | 0.621554 | 7_4:+45006534 | None:intergenic |
| TTTAATGTACAATAAATACC+TGG | 0.623565 | 7_4:+45005295 | None:intergenic |
| TTATCAAGTCCAAGAACCAA+AGG | 0.627304 | 7_4:+45007303 | None:intergenic |
| ATATTAATAACTTACCGCAA+AGG | 0.627695 | 7_4:-45008152 | Msa1156630:intron |
| GATGAAGACGGAGAGCGAGG+TGG | 0.633026 | 7_4:-45007417 | Msa1156630:CDS |
| GATGGATCAATTGAATCTAG+GGG | 0.634509 | 7_4:+45005846 | None:intergenic |
| ATGGAGAAAATCTGTTGACA+AGG | 0.637899 | 7_4:-45007810 | Msa1156630:intron |
| GGAGATGAAGACGGAGAGCG+AGG | 0.638450 | 7_4:-45007420 | Msa1156630:CDS |
| ATAATGTATGTCGAAGCACC+TGG | 0.644500 | 7_4:+45006591 | None:intergenic |
| TCATTCTCGAAATAGTGGGT+GGG | 0.651636 | 7_4:-45008381 | Msa1156630:CDS |
| GTGAGGAAAGTCGTTAGTGG+CGG | 0.662295 | 7_4:-45008350 | Msa1156630:CDS |
| AAAGGAACCAATAAAAGCAG+AGG | 0.666025 | 7_4:+45007321 | None:intergenic |
| TCGTTAGTGGCGGTTCAATG+AGG | 0.671495 | 7_4:-45008340 | Msa1156630:CDS |
| ACTATTTGGTGATTCCGAGG+CGG | 0.686375 | 7_4:-45007616 | Msa1156630:CDS |
| ATATGCTATGTGTCGCACAT+GGG | 0.694790 | 7_4:-45007520 | Msa1156630:CDS |
| GTGGGTGGGCAGCTGCTGTG+AGG | 0.740507 | 7_4:-45008367 | Msa1156630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAATGAATTAAGA+TGG | + | chr7_4:45005339-45005358 | None:intergenic | 10.0% |
| !!! | TTCAATATAAATTCTATTTT+GGG | - | chr7_4:45005447-45005466 | Msa1156630:three_prime_UTR | 10.0% |
| !!! | TTTTTTTTTTTTGTTTAAGA+TGG | - | chr7_4:45005628-45005647 | Msa1156630:CDS | 10.0% |
| !! | TGATTTAAAAATTATGATAA+AGG | + | chr7_4:45007897-45007916 | None:intergenic | 10.0% |
| !! | CAAAATAGAATTTATATTGA+AGG | + | chr7_4:45005448-45005467 | None:intergenic | 15.0% |
| !!! | CTTCAATATAAATTCTATTT+TGG | - | chr7_4:45005446-45005465 | Msa1156630:three_prime_UTR | 15.0% |
| !! | TTTGAACAAACAATAAAATT+GGG | + | chr7_4:45005763-45005782 | None:intergenic | 15.0% |
| !!! | TTTTGAACAAACAATAAAAT+TGG | + | chr7_4:45005764-45005783 | None:intergenic | 15.0% |
| !! | AAAAGTCAAATTTATTGAAT+TGG | - | chr7_4:45005781-45005800 | Msa1156630:intron | 15.0% |
| !!! | TTTTAATATACATACCTTAT+AGG | - | chr7_4:45006951-45006970 | Msa1156630:intron | 15.0% |
| !!! | AAAAAAATTCAGAGATTTTA+AGG | + | chr7_4:45007117-45007136 | None:intergenic | 15.0% |
| !!! | TAATTGATAGTATAAGAAAA+GGG | + | chr7_4:45008005-45008024 | None:intergenic | 15.0% |
| !! | ATAAAAAAAAATGCTGAAAA+AGG | + | chr7_4:45008520-45008539 | None:intergenic | 15.0% |
| !!! | TCAAAAGATTCCTTTTTTTT+TGG | - | chr7_4:45005474-45005493 | Msa1156630:three_prime_UTR | 20.0% |
| !!! | CAAAAGATTCCTTTTTTTTT+GGG | - | chr7_4:45005475-45005494 | Msa1156630:three_prime_UTR | 20.0% |
| !! | TTGAACAAACAATAAAATTG+GGG | + | chr7_4:45005762-45005781 | None:intergenic | 20.0% |
| !!! | TTAAATTGTAGGACATTTTT+AGG | - | chr7_4:45005901-45005920 | Msa1156630:intron | 20.0% |
| !!! | TAAATTGTAGGACATTTTTA+GGG | - | chr7_4:45005902-45005921 | Msa1156630:intron | 20.0% |
| !! | TAATAATCAGCTTATATGTT+TGG | - | chr7_4:45006299-45006318 | Msa1156630:intron | 20.0% |
| !! | TAAGGTATGTATATTAAAAC+TGG | + | chr7_4:45006950-45006969 | None:intergenic | 20.0% |
| !! | CACAAAAATAACAAAAACAA+AGG | + | chr7_4:45007284-45007303 | None:intergenic | 20.0% |
| !!! | GTAATTGATAGTATAAGAAA+AGG | + | chr7_4:45008006-45008025 | None:intergenic | 20.0% |
| !!! | AGTTTTGTTTAATTTACAAC+CGG | + | chr7_4:45008685-45008704 | None:intergenic | 20.0% |
| !! | ATCACTAAGTACATATTAAA+TGG | - | chr7_4:45008925-45008944 | Msa1156630:intron | 20.0% |
| !! | AACTAGTTATAGCAAAATAA+CGG | + | chr7_4:45009236-45009255 | None:intergenic | 20.0% |
| !! | TTTAATGTACAATAAATACC+TGG | + | chr7_4:45009727-45009746 | None:intergenic | 20.0% |
| !! | GATTTTCTTCTCAACTTTTA+AGG | + | chr7_4:45005186-45005205 | None:intergenic | 25.0% |
| !! | AGAGAATGATGAAGAAATTT+TGG | + | chr7_4:45005260-45005279 | None:intergenic | 25.0% |
| ! | TGGAAAATTGAAGAGAATAA+GGG | + | chr7_4:45005319-45005338 | None:intergenic | 25.0% |
| ! | ATGGAAAATTGAAGAGAATA+AGG | + | chr7_4:45005320-45005339 | None:intergenic | 25.0% |
| ! | TGAAGAAAACCCAAAAAAAA+AGG | + | chr7_4:45005487-45005506 | None:intergenic | 25.0% |
| ! | AAATTTCATAAGAGCTTCAA+AGG | + | chr7_4:45005552-45005571 | None:intergenic | 25.0% |
| ! | TATTGAATTGGATCGAAATA+TGG | - | chr7_4:45005793-45005812 | Msa1156630:intron | 25.0% |
| ! | TTCTGTTTAGTGGTATATAT+AGG | - | chr7_4:45005843-45005862 | Msa1156630:CDS | 25.0% |
| ! | AACCTACATGATTAAATTGT+AGG | - | chr7_4:45005890-45005909 | Msa1156630:intron | 25.0% |
| ! | AGATGTTATCTTTACACTAT+TGG | - | chr7_4:45006264-45006283 | Msa1156630:intron | 25.0% |
| ! | TATTGAAGGATTTATGTGAT+AGG | - | chr7_4:45006421-45006440 | Msa1156630:intron | 25.0% |
| !! | ATTCATGCTGTGAAATTTTA+TGG | + | chr7_4:45006785-45006804 | None:intergenic | 25.0% |
| ! | ATATTAATAACTTACCGCAA+AGG | - | chr7_4:45006867-45006886 | Msa1156630:intron | 25.0% |
| ! | AGTATACTAGTGATGTTAAT+TGG | - | chr7_4:45006997-45007016 | Msa1156630:intron | 25.0% |
| ! | GTATACTAGTGATGTTAATT+GGG | - | chr7_4:45006998-45007017 | Msa1156630:intron | 25.0% |
| ! | TATACTAGTGATGTTAATTG+GGG | - | chr7_4:45006999-45007018 | Msa1156630:intron | 25.0% |
| !!! | GCATTACTTTTTCACAAATT+AGG | - | chr7_4:45007180-45007199 | Msa1156630:intron | 25.0% |
| ! | TATTTATAATTTACAGCCAG+TGG | - | chr7_4:45007355-45007374 | Msa1156630:CDS | 25.0% |
| ! | TCAATATATTCTTTATCCAC+TGG | + | chr7_4:45007374-45007393 | None:intergenic | 25.0% |
| ! | ACAAGCATAATCGTATAAAA+AGG | + | chr7_4:45007807-45007826 | None:intergenic | 25.0% |
| ! | TTGTGTAAAAGAATCCAAAT+AGG | + | chr7_4:45007846-45007865 | None:intergenic | 25.0% |
| !! | ATTCTTTTACACAATAGAAG+TGG | - | chr7_4:45007852-45007871 | Msa1156630:intron | 25.0% |
| ! | CAAATAAGCCAATATAAACA+TGG | - | chr7_4:45007915-45007934 | Msa1156630:intron | 25.0% |
| ! | GCAAATTTCCATGTTTATAT+TGG | + | chr7_4:45007926-45007945 | None:intergenic | 25.0% |
| ! | TTAAAAGTTGACTGCAATAA+AGG | + | chr7_4:45008374-45008393 | None:intergenic | 25.0% |
| ! | GGTTGTAAATTAAACAAAAC+TGG | - | chr7_4:45008684-45008703 | Msa1156630:intron | 25.0% |
| ! | AAAACTGGCATCATATATAA+AGG | - | chr7_4:45008699-45008718 | Msa1156630:intron | 25.0% |
| !! | AAAGAGAGTGCAATATATAA+AGG | - | chr7_4:45008728-45008747 | Msa1156630:intron | 25.0% |
| !! | GTACATATTAAATGGTTTTC+AGG | - | chr7_4:45008933-45008952 | Msa1156630:intron | 25.0% |
| !!! | TTTCAGGTTGTTAATATTAC+TGG | - | chr7_4:45008949-45008968 | Msa1156630:intron | 25.0% |
| !!! | TTCAGGTTGTTAATATTACT+GGG | - | chr7_4:45008950-45008969 | Msa1156630:intron | 25.0% |
| ! | CAAAAATCATCAAAATCATC+TGG | + | chr7_4:45009323-45009342 | None:intergenic | 25.0% |
| ! | GCTACAATATGAATTAAGTA+AGG | - | chr7_4:45009546-45009565 | Msa1156630:intron | 25.0% |
| ! | TGTTTACTCATTTGTTCATA+TGG | - | chr7_4:45009697-45009716 | Msa1156630:intron | 25.0% |
| !!! | AATTGTAGTGGATATTACTT+TGG | - | chr7_4:45009789-45009808 | Msa1156630:five_prime_UTR | 25.0% |
| AATTGAAGAGAATAAGGGAT+TGG | + | chr7_4:45005314-45005333 | None:intergenic | 30.0% | |
| TGGTATATATAGGATACCAA+AGG | - | chr7_4:45005853-45005872 | Msa1156630:CDS | 30.0% | |
| GGTATATATAGGATACCAAA+GGG | - | chr7_4:45005854-45005873 | Msa1156630:CDS | 30.0% | |
| GTATATATAGGATACCAAAG+GGG | - | chr7_4:45005855-45005874 | Msa1156630:CDS | 30.0% | |
| GTCCTACAATTTAATCATGT+AGG | + | chr7_4:45005895-45005914 | None:intergenic | 30.0% | |
| !!! | TGTCTGGTTTTTAAGAAACA+TGG | + | chr7_4:45005944-45005963 | None:intergenic | 30.0% |
| TTAAAAACCAGACATGATTC+TGG | - | chr7_4:45005950-45005969 | Msa1156630:intron | 30.0% | |
| ! | ATGTTTACATTTGAAGTGTG+AGG | - | chr7_4:45006014-45006033 | Msa1156630:intron | 30.0% |
| GAATAGTTCAACTGGTTAAA+GGG | + | chr7_4:45006137-45006156 | None:intergenic | 30.0% | |
| AGAATAGTTCAACTGGTTAA+AGG | + | chr7_4:45006138-45006157 | None:intergenic | 30.0% | |
| TTCATCAATGCAGATTATGA+TGG | - | chr7_4:45006178-45006197 | Msa1156630:intron | 30.0% | |
| ! | CAGATTATGATGGCATTTTA+GGG | - | chr7_4:45006188-45006207 | Msa1156630:intron | 30.0% |
| CTGAGTATTATCAACAATCT+CGG | + | chr7_4:45006481-45006500 | None:intergenic | 30.0% | |
| TGAAAAACCAGATGTAAAGA+AGG | + | chr7_4:45006568-45006587 | None:intergenic | 30.0% | |
| ATACATTTAACAGACCTTTG+CGG | + | chr7_4:45006884-45006903 | None:intergenic | 30.0% | |
| CATCTAAACATCGCATAAAA+AGG | + | chr7_4:45006911-45006930 | None:intergenic | 30.0% | |
| TGAATATGACAAAGCAGTAT+TGG | + | chr7_4:45007159-45007178 | None:intergenic | 30.0% | |
| AATACTGCTTTGTCATATTC+AGG | - | chr7_4:45007158-45007177 | Msa1156630:intron | 30.0% | |
| TTCACAAATTAGGTAGATCA+TGG | - | chr7_4:45007190-45007209 | Msa1156630:intron | 30.0% | |
| ATTGACATCTTGCAACTATT+TGG | - | chr7_4:45007389-45007408 | Msa1156630:CDS | 30.0% | |
| GACTTGATAAAGTCAATCTA+AGG | - | chr7_4:45007729-45007748 | Msa1156630:intron | 30.0% | |
| GATAAAGGAACTTCTCTTTA+CGG | + | chr7_4:45007882-45007901 | None:intergenic | 30.0% | |
| ! | TTGATAGTATAAGAAAAGGG+TGG | + | chr7_4:45008002-45008021 | None:intergenic | 30.0% |
| ACTATCAATTACACCTGTTA+TGG | - | chr7_4:45008014-45008033 | Msa1156630:CDS | 30.0% | |
| TTTGATTCAATGTCCATAAC+AGG | + | chr7_4:45008030-45008049 | None:intergenic | 30.0% | |
| TTAATAGATGTGTCTCTGTA+AGG | + | chr7_4:45008106-45008125 | None:intergenic | 30.0% | |
| ACAGAGACACATCTATTAAT+AGG | - | chr7_4:45008107-45008126 | Msa1156630:intron | 30.0% | |
| TACATAGCAGAGATAATAAC+CGG | - | chr7_4:45008201-45008220 | Msa1156630:CDS | 30.0% | |
| TGCTATTATAAACTGTCTTC+AGG | - | chr7_4:45008342-45008361 | Msa1156630:CDS | 30.0% | |
| ! | TATTGGTGTTCAGAATGATA+AGG | - | chr7_4:45008448-45008467 | Msa1156630:CDS | 30.0% |
| AAAAGGATTATCTTGCATAC+CGG | + | chr7_4:45008503-45008522 | None:intergenic | 30.0% | |
| AATTATCGTTATGCAAGTTC+TGG | - | chr7_4:45008553-45008572 | Msa1156630:CDS | 30.0% | |
| TAGAAAAGACTACACAATGA+TGG | - | chr7_4:45008797-45008816 | Msa1156630:intron | 30.0% | |
| TTAAGTAACAACAAACAGCA+AGG | + | chr7_4:45008862-45008881 | None:intergenic | 30.0% | |
| ! | TCAGGTTGTTAATATTACTG+GGG | - | chr7_4:45008951-45008970 | Msa1156630:intron | 30.0% |
| ! | CAGTGATATGATGATGTATT+AGG | + | chr7_4:45008988-45009007 | None:intergenic | 30.0% |
| AGATGGATCAATTGAATCTA+GGG | + | chr7_4:45009177-45009196 | None:intergenic | 30.0% | |
| AAGATGGATCAATTGAATCT+AGG | + | chr7_4:45009178-45009197 | None:intergenic | 30.0% | |
| AGATTCAATTGATCCATCTT+TGG | - | chr7_4:45009178-45009197 | Msa1156630:intron | 30.0% | |
| TAAAATCCAATAGCCAAAGA+TGG | + | chr7_4:45009194-45009213 | None:intergenic | 30.0% | |
| ! | TAACTAGTTTAATTGTAGCG+AGG | - | chr7_4:45009247-45009266 | Msa1156630:intron | 30.0% |
| ! | AATTACTTGTGACTTGCATT+GGG | + | chr7_4:45009418-45009437 | None:intergenic | 30.0% |
| TTGAACTCATTGTGATTCTT+TGG | - | chr7_4:45009667-45009686 | Msa1156630:intron | 30.0% | |
| !! | TTGTTGATGAACCCTTTTAT+TGG | - | chr7_4:45009760-45009779 | Msa1156630:five_prime_UTR | 30.0% |
| CAATTCTGTAGCCAATAAAA+GGG | + | chr7_4:45009774-45009793 | None:intergenic | 30.0% | |
| ACAATTCTGTAGCCAATAAA+AGG | + | chr7_4:45009775-45009794 | None:intergenic | 30.0% | |
| TAGAGTAGTTCATATTGTGA+TGG | - | chr7_4:45009829-45009848 | Msa1156630:five_prime_UTR | 30.0% | |
| ! | ATCGTGAATTGTTGTTGTTC+AGG | + | chr7_4:45005237-45005256 | None:intergenic | 35.0% |
| ! | TTAACCTTTTCCATCAACGT+TGG | - | chr7_4:45005414-45005433 | Msa1156630:three_prime_UTR | 35.0% |
| ! | TAAACCAACGTTGATGGAAA+AGG | + | chr7_4:45005421-45005440 | None:intergenic | 35.0% |
| !!! | CACGAAAACTGTGTTTTTTC+AGG | - | chr7_4:45005991-45006010 | Msa1156630:intron | 35.0% |
| !!! | TGAGGATTTTAACTTGACCT+GGG | - | chr7_4:45006032-45006051 | Msa1156630:intron | 35.0% |
| ! | GCAGATTATGATGGCATTTT+AGG | - | chr7_4:45006187-45006206 | Msa1156630:intron | 35.0% |
| TGCAGATATTGACACAAACT+TGG | - | chr7_4:45006351-45006370 | Msa1156630:intron | 35.0% | |
| ! | GCCAAATTCTATGTTTTACG+TGG | - | chr7_4:45006387-45006406 | Msa1156630:intron | 35.0% |
| GCCACGTAAAACATAGAATT+TGG | + | chr7_4:45006391-45006410 | None:intergenic | 35.0% | |
| ! | TGTTTTACGTGGCTTCATAA+TGG | - | chr7_4:45006398-45006417 | Msa1156630:intron | 35.0% |
| ! | TGGCTTCATAATGGTATTGA+AGG | - | chr7_4:45006407-45006426 | Msa1156630:intron | 35.0% |
| !! | CGAGATTGTTGATAATACTC+AGG | - | chr7_4:45006479-45006498 | Msa1156630:intron | 35.0% |
| TAGTGATAGTAAGTTTCCCA+AGG | - | chr7_4:45006527-45006546 | Msa1156630:intron | 35.0% | |
| TGTAAAGAAGGTTGACCATA+AGG | + | chr7_4:45006556-45006575 | None:intergenic | 35.0% | |
| ACAGTTCATTCTCGAAATAG+TGG | - | chr7_4:45006633-45006652 | Msa1156630:CDS | 35.0% | |
| CAGTTCATTCTCGAAATAGT+GGG | - | chr7_4:45006634-45006653 | Msa1156630:CDS | 35.0% | |
| ATTTCACAGCATGAATCAAC+TGG | - | chr7_4:45006789-45006808 | Msa1156630:intron | 35.0% | |
| !! | TTGGTAGTGTTAGTTCGAAA+GGG | + | chr7_4:45007140-45007159 | None:intergenic | 35.0% |
| !! | ATTGGTAGTGTTAGTTCGAA+AGG | + | chr7_4:45007141-45007160 | None:intergenic | 35.0% |
| ATGGAGAAAATCTGTTGACA+AGG | - | chr7_4:45007209-45007228 | Msa1156630:intron | 35.0% | |
| GAAACAACGTAAATAGCCAT+TGG | + | chr7_4:45007578-45007597 | None:intergenic | 35.0% | |
| ! | ATGGCTATTTACGTTGTTTC+TGG | - | chr7_4:45007578-45007597 | Msa1156630:CDS | 35.0% |
| !! | AACGCTGTTTAGAGTTTTCA+AGG | - | chr7_4:45007657-45007676 | Msa1156630:intron | 35.0% |
| !! | ACGCTGTTTAGAGTTTTCAA+GGG | - | chr7_4:45007658-45007677 | Msa1156630:intron | 35.0% |
| AAAGGAACCAATAAAAGCAG+AGG | + | chr7_4:45007701-45007720 | None:intergenic | 35.0% | |
| !!! | TCTGCTTTTATTGGTTCCTT+TGG | - | chr7_4:45007700-45007719 | Msa1156630:intron | 35.0% |
| !! | TTATTGGTTCCTTTGGTTCT+TGG | - | chr7_4:45007707-45007726 | Msa1156630:intron | 35.0% |
| TTATCAAGTCCAAGAACCAA+AGG | + | chr7_4:45007719-45007738 | None:intergenic | 35.0% | |
| ! | TAAAGTCAATCTAAGGTGTG+TGG | - | chr7_4:45007736-45007755 | Msa1156630:intron | 35.0% |
| GTAAAAGAATCCAAATAGGC+AGG | + | chr7_4:45007842-45007861 | None:intergenic | 35.0% | |
| AAAGATAGAAACTTCCCTGT+CGG | - | chr7_4:45008047-45008066 | Msa1156630:CDS | 35.0% | |
| ! | ACATCGAAATTTTACCGACA+GGG | + | chr7_4:45008064-45008083 | None:intergenic | 35.0% |
| ! | AACATCGAAATTTTACCGAC+AGG | + | chr7_4:45008065-45008084 | None:intergenic | 35.0% |
| CTCTCGTGATGTAATATGAT+TGG | - | chr7_4:45008151-45008170 | Msa1156630:intron | 35.0% | |
| TTTAAATTTCCTCAGAGCCT+TGG | - | chr7_4:45008389-45008408 | Msa1156630:CDS | 35.0% | |
| AAACAGCAAGGAAACCAAAT+AGG | + | chr7_4:45008850-45008869 | None:intergenic | 35.0% | |
| ! | TGTTCAGACTGTTGTTTGAT+AGG | - | chr7_4:45008889-45008908 | Msa1156630:intron | 35.0% |
| GATGGATCAATTGAATCTAG+GGG | + | chr7_4:45009176-45009195 | None:intergenic | 35.0% | |
| ATTGATCCATCTTTGGCTAT+TGG | - | chr7_4:45009185-45009204 | Msa1156630:intron | 35.0% | |
| AAGCTTGCAGAAGAATCAAA+CGG | - | chr7_4:45009356-45009375 | Msa1156630:intron | 35.0% | |
| ! | GAATTACTTGTGACTTGCAT+TGG | + | chr7_4:45009419-45009438 | None:intergenic | 35.0% |
| ATGAACCTTGTTAATGATGC+AGG | - | chr7_4:45009485-45009504 | Msa1156630:intron | 35.0% | |
| CTGGCAATTCCTATAAATGT+CGG | - | chr7_4:45009523-45009542 | Msa1156630:intron | 35.0% | |
| TGGCAATTCCTATAAATGTC+GGG | - | chr7_4:45009524-45009543 | Msa1156630:intron | 35.0% | |
| TATTGTAGCCCGACATTTAT+AGG | + | chr7_4:45009535-45009554 | None:intergenic | 35.0% | |
| ATTTGTTCATATGGCTAACC+AGG | - | chr7_4:45009706-45009725 | Msa1156630:intron | 35.0% | |
| ! | TATTGGCTACAGAATTGTAG+TGG | - | chr7_4:45009777-45009796 | Msa1156630:five_prime_UTR | 35.0% |
| CTTTGGCAATGTCAAATAAG+TGG | - | chr7_4:45009806-45009825 | Msa1156630:five_prime_UTR | 35.0% | |
| !! | TTTCGTCGTTTTCGTTGCAA+AGG | - | chr7_4:45005388-45005407 | Msa1156630:three_prime_UTR | 40.0% |
| TGTCGTATGCTTCTGTTTAG+TGG | - | chr7_4:45005833-45005852 | Msa1156630:CDS | 40.0% | |
| !! | TCATGTAGGTTGACTTTTGC+CGG | + | chr7_4:45005881-45005900 | None:intergenic | 40.0% |
| TGTACTTCCAGAATCATGTC+TGG | + | chr7_4:45005960-45005979 | None:intergenic | 40.0% | |
| !!! | GTGAGGATTTTAACTTGACC+TGG | - | chr7_4:45006031-45006050 | Msa1156630:intron | 40.0% |
| !!! | TTTTAACTTGACCTGGGCTT+AGG | - | chr7_4:45006038-45006057 | Msa1156630:intron | 40.0% |
| !! | TTTAACTTGACCTGGGCTTA+GGG | - | chr7_4:45006039-45006058 | Msa1156630:intron | 40.0% |
| GCAACACAGAATAGTTCAAC+TGG | + | chr7_4:45006145-45006164 | None:intergenic | 40.0% | |
| TGGTCAACCTTCTTTACATC+TGG | - | chr7_4:45006558-45006577 | Msa1156630:CDS | 40.0% | |
| ! | TTCATTCTCGAAATAGTGGG+TGG | - | chr7_4:45006637-45006656 | Msa1156630:CDS | 40.0% |
| !! | TCATTCTCGAAATAGTGGGT+GGG | - | chr7_4:45006638-45006657 | Msa1156630:CDS | 40.0% |
| CAATTGCATCGAAGCCTATA+AGG | + | chr7_4:45006968-45006987 | None:intergenic | 40.0% | |
| GAAAATCTGTTGACAAGGTC+AGG | - | chr7_4:45007214-45007233 | Msa1156630:intron | 40.0% | |
| GCCTTTGTGTTGAGGTATAA+CGG | - | chr7_4:45007309-45007328 | Msa1156630:CDS | 40.0% | |
| TGTTGAGGTATAACGGCATT+AGG | - | chr7_4:45007316-45007335 | Msa1156630:CDS | 40.0% | |
| AACCTTCTTCAAGCTGGTAA+AGG | - | chr7_4:45007443-45007462 | Msa1156630:CDS | 40.0% | |
| AACCTTTACCAGCTTGAAGA+AGG | + | chr7_4:45007448-45007467 | None:intergenic | 40.0% | |
| CTTCAAGCTGGTAAAGGTTA+TGG | - | chr7_4:45007449-45007468 | Msa1156630:CDS | 40.0% | |
| AAAGGTTATGGTCTAGCTGT+TGG | - | chr7_4:45007461-45007480 | Msa1156630:CDS | 40.0% | |
| AAGGTTATGGTCTAGCTGTT+GGG | - | chr7_4:45007462-45007481 | Msa1156630:CDS | 40.0% | |
| ATATGCTATGTGTCGCACAT+GGG | - | chr7_4:45007499-45007518 | Msa1156630:CDS | 40.0% | |
| !!! | AAGTTTTAGCTCGAAACCAG+AGG | - | chr7_4:45007522-45007541 | Msa1156630:CDS | 40.0% |
| !!! | AGTTTTAGCTCGAAACCAGA+GGG | - | chr7_4:45007523-45007542 | Msa1156630:CDS | 40.0% |
| ACGTAAATAGCCATTGGAAG+TGG | + | chr7_4:45007572-45007591 | None:intergenic | 40.0% | |
| !! | GTTGTTTCTGGAGATGAAGA+CGG | - | chr7_4:45007590-45007609 | Msa1156630:CDS | 40.0% |
| AAACTCTAAACAGCGTTTGC+AGG | + | chr7_4:45007654-45007673 | None:intergenic | 40.0% | |
| !! | CGCTGTTTAGAGTTTTCAAG+GGG | - | chr7_4:45007659-45007678 | Msa1156630:intron | 40.0% |
| !! | AATAAAAGCAGAGGTGTCCA+AGG | + | chr7_4:45007692-45007711 | None:intergenic | 40.0% |
| !! | TTGGACACCTCTGCTTTTAT+TGG | - | chr7_4:45007691-45007710 | Msa1156630:intron | 40.0% |
| ! | TAAGGTGTGTGGCATTTTCA+AGG | - | chr7_4:45007747-45007766 | Msa1156630:intron | 40.0% |
| !! | GTGGCATTTTCAAGGTTCTA+TGG | - | chr7_4:45007755-45007774 | Msa1156630:intron | 40.0% |
| TAATGTGTTGCCTGCCTATT+TGG | - | chr7_4:45007829-45007848 | Msa1156630:CDS | 40.0% | |
| AGAGATAATAACCGGTGTGA+TGG | - | chr7_4:45008209-45008228 | Msa1156630:CDS | 40.0% | |
| ATTATGTGCATCCATCACAC+CGG | + | chr7_4:45008223-45008242 | None:intergenic | 40.0% | |
| ! | ATAATGTATGTCGAAGCACC+TGG | + | chr7_4:45008431-45008450 | None:intergenic | 40.0% |
| GGTGCTTCGACATACATTAT+TGG | - | chr7_4:45008431-45008450 | Msa1156630:CDS | 40.0% | |
| GCTTAACTTCATGTGGATCA+AGG | + | chr7_4:45008481-45008500 | None:intergenic | 40.0% | |
| TGATCCACATGAAGTTAAGC+CGG | - | chr7_4:45008481-45008500 | Msa1156630:CDS | 40.0% | |
| GCAAATGTGATAGCACTTAC+AGG | - | chr7_4:45008578-45008597 | Msa1156630:CDS | 40.0% | |
| CTAAGTACCAATATGAGCAC+CGG | - | chr7_4:45008663-45008682 | Msa1156630:five_prime_UTR | 40.0% | |
| TTTACAACCGGTGCTCATAT+TGG | + | chr7_4:45008673-45008692 | None:intergenic | 40.0% | |
| ATAACGGCAAACCTTTGTCT+CGG | + | chr7_4:45009220-45009239 | None:intergenic | 40.0% | |
| GACTGAGCTACAGTGAATAA+TGG | + | chr7_4:45009386-45009405 | None:intergenic | 40.0% | |
| TATTCACTGTAGCTCAGTCT+AGG | - | chr7_4:45009387-45009406 | Msa1156630:intron | 40.0% | |
| GTCACAAGTAATTCTGTGTC+AGG | - | chr7_4:45009425-45009444 | Msa1156630:intron | 40.0% | |
| TGACGACACTAGATTTGAAG+AGG | - | chr7_4:45009448-45009467 | Msa1156630:intron | 40.0% | |
| GAATTGCCAGTCATCTTCAT+TGG | + | chr7_4:45009513-45009532 | None:intergenic | 40.0% | |
| GCACTCTTCAAACGTTTAGT+AGG | - | chr7_4:45009633-45009652 | Msa1156630:intron | 40.0% | |
| TTCAGGTATGCGACTTCGTT+CGG | + | chr7_4:45005220-45005239 | None:intergenic | 45.0% | |
| !! | ATTGGTAGCGTACGTGGATA+AGG | + | chr7_4:45005296-45005315 | None:intergenic | 45.0% |
| GGCGTATAAACCAACGTTGA+TGG | + | chr7_4:45005427-45005446 | None:intergenic | 45.0% | |
| ATATAGGATACCAAAGGGGC+CGG | - | chr7_4:45005859-45005878 | Msa1156630:CDS | 45.0% | |
| ! | TCTGGAAGTACACATCCAGA+TGG | - | chr7_4:45005968-45005987 | Msa1156630:intron | 45.0% |
| ! | AACACAGTTTTCGTGCCATC+TGG | + | chr7_4:45005986-45006005 | None:intergenic | 45.0% |
| ! | TTAACTTGACCTGGGCTTAG+GGG | - | chr7_4:45006040-45006059 | Msa1156630:intron | 45.0% |
| !! | TCAAGTTGGACTTCGAGTCA+AGG | - | chr7_4:45006086-45006105 | Msa1156630:intron | 45.0% |
| ! | CAAGTTGGACTTCGAGTCAA+GGG | - | chr7_4:45006087-45006106 | Msa1156630:intron | 45.0% |
| AAGTTGGACTTCGAGTCAAG+GGG | - | chr7_4:45006088-45006107 | Msa1156630:intron | 45.0% | |
| AGTTTCCCAAGGCTTCCTTA+TGG | - | chr7_4:45006538-45006557 | Msa1156630:intron | 45.0% | |
| GTTGACCATAAGGAAGCCTT+GGG | + | chr7_4:45006546-45006565 | None:intergenic | 45.0% | |
| CGGTTCAATGAGGAGATTTC+AGG | - | chr7_4:45006689-45006708 | Msa1156630:intron | 45.0% | |
| ! | AGATTTCAGGAGCGTGTACT+AGG | - | chr7_4:45006702-45006721 | Msa1156630:intron | 45.0% |
| ! | GATTTCAGGAGCGTGTACTA+GGG | - | chr7_4:45006703-45006722 | Msa1156630:intron | 45.0% |
| ! | ACTGACGTTTCAAGCTCTGA+TGG | - | chr7_4:45006735-45006754 | Msa1156630:intron | 45.0% |
| ! | CAAGCTCTGATGGCGATATA+TGG | - | chr7_4:45006745-45006764 | Msa1156630:intron | 45.0% |
| GATGGCGATATATGGCTTCT+AGG | - | chr7_4:45006753-45006772 | Msa1156630:intron | 45.0% | |
| GCCGTTATACCTCAACACAA+AGG | + | chr7_4:45007313-45007332 | None:intergenic | 45.0% | |
| ! | GCAACTATTTGGTGATTCCG+AGG | - | chr7_4:45007400-45007419 | Msa1156630:CDS | 45.0% |
| ! | ACTATTTGGTGATTCCGAGG+CGG | - | chr7_4:45007403-45007422 | Msa1156630:CDS | 45.0% |
| ATCCACAACCTTCTTCAAGC+TGG | - | chr7_4:45007437-45007456 | Msa1156630:CDS | 45.0% | |
| TACCAGCTTGAAGAAGGTTG+TGG | + | chr7_4:45007442-45007461 | None:intergenic | 45.0% | |
| CATGTGCGACACATAGCATA+TGG | + | chr7_4:45007500-45007519 | None:intergenic | 45.0% | |
| CATATGCTATGTGTCGCACA+TGG | - | chr7_4:45007498-45007517 | Msa1156630:CDS | 45.0% | |
| GCATCTTCAATGCAGACAAC+TGG | + | chr7_4:45007632-45007651 | None:intergenic | 45.0% | |
| ! | GTTTTCCTCCCAAGATTCCA+AGG | + | chr7_4:45008409-45008428 | None:intergenic | 45.0% |
| !! | CATACCGGCTTAACTTCATG+TGG | + | chr7_4:45008488-45008507 | None:intergenic | 45.0% |
| ACACAATGATGGCCTAGTAG+TGG | - | chr7_4:45008808-45008827 | Msa1156630:intron | 45.0% | |
| AATGATGGCCTAGTAGTGGT+TGG | - | chr7_4:45008812-45008831 | Msa1156630:intron | 45.0% | |
| ATGATGGCCTAGTAGTGGTT+GGG | - | chr7_4:45008813-45008832 | Msa1156630:intron | 45.0% | |
| GGGAGGAGTGAAATCCTATT+TGG | - | chr7_4:45008833-45008852 | Msa1156630:intron | 45.0% | |
| TTTATGCTGACCCCCTTTAG+TGG | - | chr7_4:45009081-45009100 | Msa1156630:intron | 45.0% | |
| TTATGCTGACCCCCTTTAGT+GGG | - | chr7_4:45009082-45009101 | Msa1156630:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAAGG+GGG | + | chr7_4:45009094-45009113 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAAG+GGG | + | chr7_4:45009095-45009114 | None:intergenic | 45.0% |
| ! | CCAAGCCTTATCCCACTAAA+GGG | + | chr7_4:45009096-45009115 | None:intergenic | 45.0% |
| ! | ACCAAGCCTTATCCCACTAA+AGG | + | chr7_4:45009097-45009116 | None:intergenic | 45.0% |
| AGACTCCTAACAGCATTAGC+AGG | - | chr7_4:45009144-45009163 | Msa1156630:intron | 45.0% | |
| ATGTGCCTGCTAATGCTGTT+AGG | + | chr7_4:45009152-45009171 | None:intergenic | 45.0% | |
| ! | GGATTTTACTGCCGAGACAA+AGG | - | chr7_4:45009206-45009225 | Msa1156630:intron | 45.0% |
| TTCTGCAAGCTTAGTTGCTC+GGG | + | chr7_4:45009348-45009367 | None:intergenic | 45.0% | |
| CTTCTGCAAGCTTAGTTGCT+CGG | + | chr7_4:45009349-45009368 | None:intergenic | 45.0% | |
| TGGTGCCTGCATCATTAACA+AGG | + | chr7_4:45009493-45009512 | None:intergenic | 45.0% | |
| TTGTTTACCACTGCCGAGTT+CGG | - | chr7_4:45009589-45009608 | Msa1156630:intron | 45.0% | |
| AGTCAAGCATCAACCGAACT+CGG | + | chr7_4:45009605-45009624 | None:intergenic | 45.0% | |
| !! | TAAGGGATTGGTAGCGTACG+TGG | + | chr7_4:45005302-45005321 | None:intergenic | 50.0% |
| GCGAGGGATGATCATCAAGT+TGG | - | chr7_4:45006072-45006091 | Msa1156630:intron | 50.0% | |
| AGTTGGACTTCGAGTCAAGG+GGG | - | chr7_4:45006089-45006108 | Msa1156630:intron | 50.0% | |
| GGGGGATGGAAAGTCTCATT+TGG | - | chr7_4:45006109-45006128 | Msa1156630:intron | 50.0% | |
| ! | ACTAGACCCTGCCTTTGAAG+AGG | + | chr7_4:45006511-45006530 | None:intergenic | 50.0% |
| GGTTGACCATAAGGAAGCCT+TGG | + | chr7_4:45006547-45006566 | None:intergenic | 50.0% | |
| GCTGTGAGGAAAGTCGTTAG+TGG | - | chr7_4:45006666-45006685 | Msa1156630:intron | 50.0% | |
| GTGAGGAAAGTCGTTAGTGG+CGG | - | chr7_4:45006669-45006688 | Msa1156630:intron | 50.0% | |
| TCGTTAGTGGCGGTTCAATG+AGG | - | chr7_4:45006679-45006698 | Msa1156630:intron | 50.0% | |
| ! | CAGTCAGATGCTTGTTGCTC+AGG | - | chr7_4:45007037-45007056 | Msa1156630:intron | 50.0% |
| GTGTTTGCGCCTTTGTGTTG+AGG | - | chr7_4:45007301-45007320 | Msa1156630:CDS | 50.0% | |
| GATAGAAAAAGCAGCCGCCT+CGG | + | chr7_4:45007420-45007439 | None:intergenic | 50.0% | |
| ATGGTCTAGCTGTTGGGTCA+TGG | - | chr7_4:45007468-45007487 | Msa1156630:CDS | 50.0% | |
| TGGTCTAGCTGTTGGGTCAT+GGG | - | chr7_4:45007469-45007488 | Msa1156630:CDS | 50.0% | |
| CTTGCTCATTCTTCTCCCTC+TGG | + | chr7_4:45007541-45007560 | None:intergenic | 50.0% | |
| CAGAGGGAGAAGAATGAGCA+AGG | - | chr7_4:45007539-45007558 | Msa1156630:CDS | 50.0% | |
| ! | AGGAGAACTGCCACTTCCAA+TGG | - | chr7_4:45007559-45007578 | Msa1156630:CDS | 50.0% |
| TTTCAAGGGGCCTAGTTCCT+TGG | - | chr7_4:45007672-45007691 | Msa1156630:intron | 50.0% | |
| GTGTCTCTGTAAGGCAGATG+AGG | + | chr7_4:45008097-45008116 | None:intergenic | 50.0% | |
| TCCTCAGAGCCTTGGAATCT+TGG | - | chr7_4:45008397-45008416 | Msa1156630:CDS | 50.0% | |
| CCTCAGAGCCTTGGAATCTT+GGG | - | chr7_4:45008398-45008417 | Msa1156630:CDS | 50.0% | |
| GGAATCTTGGGAGGAAAACC+AGG | - | chr7_4:45008410-45008429 | Msa1156630:CDS | 50.0% | |
| TGACCCCCTTTAGTGGGATA+AGG | - | chr7_4:45009088-45009107 | Msa1156630:intron | 50.0% | |
| CCCTTTAGTGGGATAAGGCT+TGG | - | chr7_4:45009093-45009112 | Msa1156630:intron | 50.0% | |
| CAGGCACCAATGAAGATGAC+TGG | - | chr7_4:45009504-45009523 | Msa1156630:intron | 50.0% | |
| ! | TTGACTTTTGCCGGCCCCTT+TGG | + | chr7_4:45005872-45005891 | None:intergenic | 55.0% |
| ! | CCTGGGCTTAGGGGATTTTG+CGG | - | chr7_4:45006049-45006068 | Msa1156630:intron | 55.0% |
| ! | CTGGGCTTAGGGGATTTTGC+GGG | - | chr7_4:45006050-45006069 | Msa1156630:intron | 55.0% |
| ! | TTAGGGGATTTTGCGGGCGA+GGG | - | chr7_4:45006056-45006075 | Msa1156630:intron | 55.0% |
| GTTGGACTTCGAGTCAAGGG+GGG | - | chr7_4:45006090-45006109 | Msa1156630:intron | 55.0% | |
| TTGGACTTCGAGTCAAGGGG+GGG | - | chr7_4:45006091-45006110 | Msa1156630:intron | 55.0% | |
| ! | AGACCCTGCCTTTGAAGAGG+CGG | + | chr7_4:45006508-45006527 | None:intergenic | 55.0% |
| AGCGTGTACTAGGGTCATGC+AGG | - | chr7_4:45006712-45006731 | Msa1156630:intron | 55.0% | |
| TCTAGCTGTTGGGTCATGGG+TGG | - | chr7_4:45007472-45007491 | Msa1156630:CDS | 55.0% | |
| CTAGCTGTTGGGTCATGGGT+GGG | - | chr7_4:45007473-45007492 | Msa1156630:CDS | 55.0% | |
| TAGCTGTTGGGTCATGGGTG+GGG | - | chr7_4:45007474-45007493 | Msa1156630:CDS | 55.0% | |
| !! | GCAGAGGTGTCCAAGGAACT+AGG | + | chr7_4:45007685-45007704 | None:intergenic | 55.0% |
| CCCAAGATTCCAAGGCTCTG+AGG | + | chr7_4:45008401-45008420 | None:intergenic | 55.0% | |
| CAGAGCCTTGGAATCTTGGG+AGG | - | chr7_4:45008401-45008420 | Msa1156630:CDS | 55.0% | |
| ATGGCCTAGTAGTGGTTGGG+AGG | - | chr7_4:45008816-45008835 | Msa1156630:intron | 55.0% | |
| CACTCCTCCCAACCACTACT+AGG | + | chr7_4:45008823-45008842 | None:intergenic | 55.0% | |
| CCGCAAAATCCCCTAAGCCC+AGG | + | chr7_4:45006052-45006071 | None:intergenic | 60.0% | |
| ! | CTTAGGGGATTTTGCGGGCG+AGG | - | chr7_4:45006055-45006074 | Msa1156630:intron | 60.0% |
| ACTTCGAGTCAAGGGGGGGA+TGG | - | chr7_4:45006095-45006114 | Msa1156630:intron | 60.0% | |
| TCAGGTGCCCGCCTCTTCAA+AGG | - | chr7_4:45006497-45006516 | Msa1156630:intron | 60.0% | |
| TGCCCGCCTCTTCAAAGGCA+GGG | - | chr7_4:45006502-45006521 | Msa1156630:intron | 60.0% | |
| ! | GACCCTGCCTTTGAAGAGGC+GGG | + | chr7_4:45006507-45006526 | None:intergenic | 60.0% |
| GGAGATGAAGACGGAGAGCG+AGG | - | chr7_4:45007599-45007618 | Msa1156630:CDS | 60.0% | |
| GATGAAGACGGAGAGCGAGG+TGG | - | chr7_4:45007602-45007621 | Msa1156630:CDS | 60.0% | |
| GCATCAACCGAACTCGGCAG+TGG | + | chr7_4:45009599-45009618 | None:intergenic | 60.0% | |
| GTGCCCGCCTCTTCAAAGGC+AGG | - | chr7_4:45006501-45006520 | Msa1156630:intron | 65.0% | |
| GTGGGTGGGCAGCTGCTGTG+AGG | - | chr7_4:45006652-45006671 | Msa1156630:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 45005144 | 45009897 | 45005144 | ID=Msa1156630;Name=Msa1156630 |
| chr7_4 | mRNA | 45005144 | 45009897 | 45005144 | ID=Msa1156630-mRNA-1;Parent=Msa1156630;Name=Msa1156630-mRNA-1;_AED=0.10;_eAED=0.10;_QI=220|0.85|0.87|1|0.85|0.75|8|359|474 |
| chr7_4 | exon | 45005144 | 45005717 | 45005144 | ID=Msa1156630-mRNA-1:exon:11673;Parent=Msa1156630-mRNA-1 |
| chr7_4 | exon | 45005814 | 45005895 | 45005814 | ID=Msa1156630-mRNA-1:exon:11672;Parent=Msa1156630-mRNA-1 |
| chr7_4 | exon | 45006539 | 45006677 | 45006539 | ID=Msa1156630-mRNA-1:exon:11671;Parent=Msa1156630-mRNA-1 |
| chr7_4 | exon | 45007291 | 45007670 | 45007291 | ID=Msa1156630-mRNA-1:exon:11670;Parent=Msa1156630-mRNA-1 |
| chr7_4 | exon | 45007811 | 45007861 | 45007811 | ID=Msa1156630-mRNA-1:exon:11669;Parent=Msa1156630-mRNA-1 |
| chr7_4 | exon | 45007983 | 45008068 | 45007983 | ID=Msa1156630-mRNA-1:exon:11668;Parent=Msa1156630-mRNA-1 |
| chr7_4 | exon | 45008153 | 45008685 | 45008153 | ID=Msa1156630-mRNA-1:exon:11667;Parent=Msa1156630-mRNA-1 |
| chr7_4 | exon | 45009739 | 45009897 | 45009739 | ID=Msa1156630-mRNA-1:exon:11666;Parent=Msa1156630-mRNA-1 |
| chr7_4 | five_prime_UTR | 45009739 | 45009897 | 45009739 | ID=Msa1156630-mRNA-1:five_prime_utr;Parent=Msa1156630-mRNA-1 |
| chr7_4 | five_prime_UTR | 45008625 | 45008685 | 45008625 | ID=Msa1156630-mRNA-1:five_prime_utr;Parent=Msa1156630-mRNA-1 |
| chr7_4 | CDS | 45008153 | 45008624 | 45008153 | ID=Msa1156630-mRNA-1:cds;Parent=Msa1156630-mRNA-1 |
| chr7_4 | CDS | 45007983 | 45008068 | 45007983 | ID=Msa1156630-mRNA-1:cds;Parent=Msa1156630-mRNA-1 |
| chr7_4 | CDS | 45007811 | 45007861 | 45007811 | ID=Msa1156630-mRNA-1:cds;Parent=Msa1156630-mRNA-1 |
| chr7_4 | CDS | 45007291 | 45007670 | 45007291 | ID=Msa1156630-mRNA-1:cds;Parent=Msa1156630-mRNA-1 |
| chr7_4 | CDS | 45006539 | 45006677 | 45006539 | ID=Msa1156630-mRNA-1:cds;Parent=Msa1156630-mRNA-1 |
| chr7_4 | CDS | 45005814 | 45005895 | 45005814 | ID=Msa1156630-mRNA-1:cds;Parent=Msa1156630-mRNA-1 |
| chr7_4 | CDS | 45005503 | 45005717 | 45005503 | ID=Msa1156630-mRNA-1:cds;Parent=Msa1156630-mRNA-1 |
| chr7_4 | three_prime_UTR | 45005144 | 45005502 | 45005144 | ID=Msa1156630-mRNA-1:three_prime_utr;Parent=Msa1156630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
