Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069710 | XP_003624448.2 | 92.506 | 427 | 8 | 3 | 1 | 407 | 1 | 423 | 0.0 | 784 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069710 | sp|Q9SGA2|GDPD1_ARATH | 60.686 | 379 | 108 | 5 | 48 | 405 | 1 | 359 | 4.41e-154 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069710 | G7KW66 | 92.506 | 427 | 8 | 3 | 1 | 407 | 1 | 423 | 0.0 | 784 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1030580 | Msa1069710 | 0.875593 | 2.727623e-68 | -8.615850e-47 |
| Msa1069710 | Msa1120170 | 0.818008 | 2.452884e-52 | -8.615850e-47 |
| Msa1069710 | Msa1383500 | 0.801167 | 1.023010e-48 | -8.615850e-47 |
| Msa0898830 | Msa1069710 | -0.802388 | 5.744910e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069710 | MtrunA17_Chr7g0251681 | 92.506 | 427 | 8 | 3 | 1 | 407 | 1 | 423 | 0.0 | 784 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069710 | AT3G02040.1 | 60.686 | 379 | 108 | 5 | 48 | 405 | 1 | 359 | 4.48e-155 | 442 |
| Msa1069710 | AT5G41080.1 | 58.005 | 381 | 128 | 5 | 48 | 405 | 1 | 372 | 2.41e-148 | 426 |
| Msa1069710 | AT5G41080.2 | 58.857 | 350 | 121 | 2 | 79 | 405 | 7 | 356 | 8.19e-145 | 416 |
| Msa1069710 | AT5G43300.1 | 52.035 | 344 | 139 | 4 | 87 | 405 | 28 | 370 | 5.82e-121 | 356 |
| Msa1069710 | AT5G43300.2 | 56.391 | 266 | 95 | 2 | 87 | 332 | 28 | 292 | 1.83e-103 | 308 |
Find 109 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAGACACATAGTAGAATT+TGG | 0.143971 | 7_2:-65490270 | Msa1069710:three_prime_UTR |
| GGTATTTATTTGAGGGAATT+TGG | 0.153410 | 7_2:+65494266 | None:intergenic |
| TCTCAAAGTTGAACCTTCTT+TGG | 0.179312 | 7_2:-65491362 | Msa1069710:CDS |
| ATGCCAAAGTTCGTTGTAAT+TGG | 0.203809 | 7_2:-65493875 | Msa1069710:CDS |
| CTGAGATTAAAGGGATATTT+AGG | 0.216120 | 7_2:-65490799 | Msa1069710:CDS |
| AAGATGGAAAGATATATAAT+TGG | 0.239327 | 7_2:-65491429 | Msa1069710:CDS |
| TGCTGCATGTAAACCGCTTC+TGG | 0.257661 | 7_2:+65490576 | None:intergenic |
| TCTTCCTCCCCAATCTTTGC+TGG | 0.274045 | 7_2:+65490480 | None:intergenic |
| GGAATTGTTTCTGAGATTAA+AGG | 0.279889 | 7_2:-65490809 | Msa1069710:CDS |
| TTAGACACATAGTAGAATTT+GGG | 0.298159 | 7_2:-65490269 | Msa1069710:three_prime_UTR |
| CTCAAAGTTGAACCTTCTTT+GGG | 0.302561 | 7_2:-65491361 | Msa1069710:CDS |
| AATAAAAGAGTTAATGTAAA+AGG | 0.311552 | 7_2:+65490290 | None:intergenic |
| TTTCATTGAATTTGATGTTC+AGG | 0.320866 | 7_2:-65493744 | Msa1069710:intron |
| TGAAAAGTTGAGAATATAAT+AGG | 0.330593 | 7_2:+65491118 | None:intergenic |
| AGATTTGAGAAGGAACTCTT+TGG | 0.345870 | 7_2:-65490870 | Msa1069710:CDS |
| GGGAACACTGATGATAGTTT+AGG | 0.348892 | 7_2:-65490327 | Msa1069710:three_prime_UTR |
| GAGGGTTTGGCTGAAGGGAT+TGG | 0.350435 | 7_2:-65490459 | Msa1069710:CDS |
| AGGGTTTGGCTGAAGGGATT+GGG | 0.352025 | 7_2:-65490458 | Msa1069710:CDS |
| TTATCAGAGTTTCTTTCCTA+TGG | 0.353326 | 7_2:-65491502 | Msa1069710:CDS |
| GGTTTACATGCAGCACCTAA+TGG | 0.363218 | 7_2:-65490568 | Msa1069710:CDS |
| TACAAATGATTAAGCATTCA+TGG | 0.364964 | 7_2:+65490239 | None:intergenic |
| GATTGGGGAGGAAGAGGGTT+TGG | 0.369410 | 7_2:-65490472 | Msa1069710:CDS |
| GTTTACATGCAGCACCTAAT+GGG | 0.372968 | 7_2:-65490567 | Msa1069710:CDS |
| AGCAAAGATTGGGGAGGAAG+AGG | 0.375857 | 7_2:-65490478 | Msa1069710:CDS |
| AATCTCTCTCTTCTAACATA+TGG | 0.380053 | 7_2:-65490743 | Msa1069710:CDS |
| AAGCTTGTTCATAAACAATA+TGG | 0.381299 | 7_2:+65491311 | None:intergenic |
| AGCAGCATTAAAAGACATAA+TGG | 0.382783 | 7_2:+65493784 | None:intergenic |
| GAATTGTTTCTGAGATTAAA+GGG | 0.391330 | 7_2:-65490808 | Msa1069710:CDS |
| TTGATCTTGCTTACAGCTCC+AGG | 0.402946 | 7_2:+65490773 | None:intergenic |
| GGAGGCTTTGAAACTCAGTT+TGG | 0.410209 | 7_2:-65490846 | Msa1069710:CDS |
| TCACTTGAGGATGAAGGAAA+TGG | 0.417148 | 7_2:-65490197 | Msa1069710:three_prime_UTR |
| ATGATGAAGCCAGCAAAGAT+TGG | 0.421649 | 7_2:-65490489 | Msa1069710:CDS |
| TGATGAAGCCAGCAAAGATT+GGG | 0.421680 | 7_2:-65490488 | Msa1069710:CDS |
| TTACCTTTAAAATGGCTTGA+AGG | 0.424857 | 7_2:+65491275 | None:intergenic |
| CAGCACCTAATGGGGATTGA+TGG | 0.426147 | 7_2:-65490558 | Msa1069710:CDS |
| GGTACGTACCGCTAGGAAAA+CGG | 0.428995 | 7_2:+65494052 | None:intergenic |
| ATATGTTAGAAGAGAGAGAT+TGG | 0.434124 | 7_2:+65490745 | None:intergenic |
| TTGAAACTCAGTTTGGAGAA+TGG | 0.434946 | 7_2:-65490839 | Msa1069710:CDS |
| AACCTTGGGGTATTTATTTG+AGG | 0.437368 | 7_2:+65494258 | None:intergenic |
| TTTGGTAATGAATTAAGATT+GGG | 0.441137 | 7_2:+65494192 | None:intergenic |
| TATCAGAGTTTCTTTCCTAT+GGG | 0.444504 | 7_2:-65491501 | Msa1069710:CDS |
| AGGAATGGAAGGAAAAGTTT+TGG | 0.446126 | 7_2:-65491464 | Msa1069710:CDS |
| AGATGGAAAGATATATAATT+GGG | 0.447338 | 7_2:-65491428 | Msa1069710:CDS |
| AAAGGGATATTTAGGAATCC+TGG | 0.447524 | 7_2:-65490791 | Msa1069710:CDS |
| AGGAAGAGGGTTTGGCTGAA+GGG | 0.448587 | 7_2:-65490464 | Msa1069710:CDS |
| CTTTGAGAAATGCTTCTTGA+AGG | 0.451089 | 7_2:+65491377 | None:intergenic |
| ATTATGTATGAAAATTAGCT+TGG | 0.455702 | 7_2:-65490172 | Msa1069710:three_prime_UTR |
| CGAACAAGTATCGCTGCATC+AGG | 0.458965 | 7_2:+65491094 | None:intergenic |
| TCACCCCATCAATCCCCATT+AGG | 0.460955 | 7_2:+65490553 | None:intergenic |
| GAGGAAGAGGGTTTGGCTGA+AGG | 0.464610 | 7_2:-65490465 | Msa1069710:CDS |
| AGAAATAACAGAGGCGGTTG+CGG | 0.465009 | 7_2:-65490514 | Msa1069710:CDS |
| ACGGCTTTGAGAGCCATGTT+AGG | 0.467523 | 7_2:+65494141 | None:intergenic |
| ACCTTGGGGTATTTATTTGA+GGG | 0.468470 | 7_2:+65494259 | None:intergenic |
| TGTCCAATTACAACGAACTT+TGG | 0.470443 | 7_2:+65493872 | None:intergenic |
| CTTTAAAGCAATAGCAATTG+TGG | 0.470865 | 7_2:+65490378 | None:intergenic |
| TTTCTCTCTTTCACCTAACA+TGG | 0.474646 | 7_2:-65494154 | Msa1069710:CDS |
| TTTGAGAAGGAACTCTTTGG+AGG | 0.476549 | 7_2:-65490867 | Msa1069710:CDS |
| AAAGAAAAGAAAGCTCCTGC+TGG | 0.480481 | 7_2:+65490412 | None:intergenic |
| TAAATTGCAAAGCACATATC+CGG | 0.486469 | 7_2:-65491071 | Msa1069710:intron |
| GGGGAGAGGAGGGAAAGGGA+GGG | 0.486552 | 7_2:+65494075 | None:intergenic |
| TATGAATGTGTTACAATCTA+CGG | 0.500744 | 7_2:-65493837 | Msa1069710:CDS |
| TTGCTTTAAAGAAGAAGAGA+TGG | 0.503337 | 7_2:-65490366 | Msa1069710:exon |
| TGAAGGTGGGAGAGAAACCT+TGG | 0.511002 | 7_2:+65494243 | None:intergenic |
| AGCACCTAATGGGGATTGAT+GGG | 0.513719 | 7_2:-65490557 | Msa1069710:CDS |
| GAGAAGGAACTCTTTGGAGG+AGG | 0.514894 | 7_2:-65490864 | Msa1069710:CDS |
| GAAGGTGGGAGAGAAACCTT+GGG | 0.520570 | 7_2:+65494244 | None:intergenic |
| TTTGAGAAATGCTTCTTGAA+GGG | 0.525807 | 7_2:+65491378 | None:intergenic |
| TATGGGCTTCAAAGAGAGGC+AGG | 0.530911 | 7_2:-65491484 | Msa1069710:CDS |
| TGCTTTAAAGAAGAAGAGAT+GGG | 0.532380 | 7_2:-65490365 | Msa1069710:exon |
| GCAAAGATTGGGGAGGAAGA+GGG | 0.539261 | 7_2:-65490477 | Msa1069710:CDS |
| ATGTATGAAAATTAGCTTGG+AGG | 0.540399 | 7_2:-65490169 | Msa1069710:three_prime_UTR |
| GTAATTGGACATAGAGGAAA+CGG | 0.541049 | 7_2:-65493860 | Msa1069710:CDS |
| TTGGAGATGAGCAATGGTGA+TGG | 0.541138 | 7_2:-65493905 | Msa1069710:CDS |
| GCTTCAAAGAGAGGCAGGAA+TGG | 0.544974 | 7_2:-65491479 | Msa1069710:CDS |
| TGGAGCTGTAAGCAAGATCA+AGG | 0.553638 | 7_2:-65490771 | Msa1069710:CDS |
| TTCCTATGGGCTTCAAAGAG+AGG | 0.559843 | 7_2:-65491488 | Msa1069710:CDS |
| TTACTGATTATGCTAAGGAT+AGG | 0.562411 | 7_2:-65491141 | Msa1069710:CDS |
| AACTCTGATAAACACAACTC+AGG | 0.562675 | 7_2:+65491514 | None:intergenic |
| GATGATGATGATGAAGATGA+AGG | 0.565379 | 7_2:+65494226 | None:intergenic |
| CAAAGAGAGGCAGGAATGGA+AGG | 0.567526 | 7_2:-65491475 | Msa1069710:CDS |
| TCAAATTCAATGAAATCAAG+AGG | 0.567530 | 7_2:+65493752 | None:intergenic |
| AAGAAAAGAAAGCTCCTGCT+GGG | 0.569172 | 7_2:+65490413 | None:intergenic |
| TTCGTTGTAATTGGACATAG+AGG | 0.570824 | 7_2:-65493866 | Msa1069710:CDS |
| AGGGACATCGGAGACGTGGA+CGG | 0.575927 | 7_2:+65494122 | None:intergenic |
| TCAATGTTAAAACCCAAAGA+AGG | 0.576235 | 7_2:+65491349 | None:intergenic |
| AAGAGTTAATGTAAAAGGAG+AGG | 0.577756 | 7_2:+65490295 | None:intergenic |
| GGTTGTTACTGATTATGCTA+AGG | 0.578866 | 7_2:-65491146 | Msa1069710:CDS |
| AAGATCGAGGGAAGGGACAT+CGG | 0.579041 | 7_2:+65494110 | None:intergenic |
| GATGATGATGAAGATGAAGG+TGG | 0.581432 | 7_2:+65494229 | None:intergenic |
| AGCTCCTGCTGGGAAAATTG+AGG | 0.583529 | 7_2:+65490423 | None:intergenic |
| AGTTTGGAGAATGGATTGAA+AGG | 0.583600 | 7_2:-65490830 | Msa1069710:CDS |
| CAGGGACAAGATCGAGGGAA+GGG | 0.588983 | 7_2:+65494103 | None:intergenic |
| ATGATGATGAAGATGAAGGT+GGG | 0.593395 | 7_2:+65494230 | None:intergenic |
| TGACAGTAATGTTCCAGAAG+CGG | 0.597283 | 7_2:-65490589 | Msa1069710:intron |
| GGGAAGGGACATCGGAGACG+TGG | 0.600097 | 7_2:+65494118 | None:intergenic |
| TTTACATGCAGCACCTAATG+GGG | 0.605831 | 7_2:-65490566 | Msa1069710:CDS |
| AAATCTATGAAGATTTGAGA+AGG | 0.605861 | 7_2:-65490880 | Msa1069710:CDS |
| TCCCTCAAATAAATACCCCA+AGG | 0.608620 | 7_2:-65494260 | Msa1069710:CDS |
| TCAGGGACAAGATCGAGGGA+AGG | 0.614252 | 7_2:+65494102 | None:intergenic |
| TAGACACATAGTAGAATTTG+GGG | 0.617688 | 7_2:-65490268 | Msa1069710:three_prime_UTR |
| ATGTGTTACAATCTACGGAT+CGG | 0.624199 | 7_2:-65493832 | Msa1069710:CDS |
| GATGAAGCCAGCAAAGATTG+GGG | 0.647050 | 7_2:-65490487 | Msa1069710:CDS |
| TGCCTCTCTTTGAAGCCCAT+AGG | 0.647075 | 7_2:+65491486 | None:intergenic |
| TGTGCAAGAAATAACAGAGG+CGG | 0.669888 | 7_2:-65490520 | Msa1069710:CDS |
| GCACCTAATGGGGATTGATG+GGG | 0.682183 | 7_2:-65490556 | Msa1069710:CDS |
| GAAGCCAGCAAAGATTGGGG+AGG | 0.683522 | 7_2:-65490484 | Msa1069710:CDS |
| TCAGGTTTGGAGATGAGCAA+TGG | 0.690070 | 7_2:-65493911 | Msa1069710:intron |
| AAGGTGGGAGAGAAACCTTG+GGG | 0.788974 | 7_2:+65494245 | None:intergenic |
| CGTACCGCTAGGAAAACGGG+GGG | 0.801803 | 7_2:+65494056 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAAAAAAAAAATAGTTTT+TGG | - | chr7_2:65491053-65491072 | Msa1069710:intron | 10.0% |
| !! | AAATTAAAATAGAACTTATT+TGG | + | chr7_2:65492199-65492218 | None:intergenic | 10.0% |
| !!! | AATTTTATTTACCTTTAAAA+TGG | + | chr7_2:65493178-65493197 | None:intergenic | 10.0% |
| !!! | GTCAAATATTTCATTTTTTT+TGG | + | chr7_2:65492789-65492808 | None:intergenic | 15.0% |
| !!! | TTTGGTAAATAATTTTCAAA+GGG | + | chr7_2:65492765-65492784 | None:intergenic | 15.0% |
| !!! | TTTTGGTAAATAATTTTCAA+AGG | + | chr7_2:65492764-65492783 | None:intergenic | 15.0% |
| !!! | ACAAATAAGTTTTATTGTAT+AGG | + | chr7_2:65492444-65492463 | None:intergenic | 15.0% |
| !! | GCAAATTAAAAAAAACAAAA+TGG | - | chr7_2:65492050-65492069 | Msa1069710:intron | 15.0% |
| !! | ACTCATTAAAAAAAACAAAA+TGG | + | chr7_2:65492224-65492243 | None:intergenic | 15.0% |
| !!! | ACAAATAAGTTTTATTGTAT+AGG | - | chr7_2:65492444-65492463 | Msa1069710:intron | 15.0% |
| !!! | TTTTGGTAAATAATTTTCAA+AGG | - | chr7_2:65492764-65492783 | Msa1069710:intron | 15.0% |
| !!! | TTTGGTAAATAATTTTCAAA+GGG | - | chr7_2:65492765-65492784 | Msa1069710:intron | 15.0% |
| !!! | GTCAAATATTTCATTTTTTT+TGG | - | chr7_2:65492789-65492808 | Msa1069710:intron | 15.0% |
| !!! | TAAATTTGTTCTAAACAAAA+AGG | + | chr7_2:65493409-65493428 | None:intergenic | 15.0% |
| !! | AATAAAAGAGTTAATGTAAA+AGG | + | chr7_2:65494155-65494174 | None:intergenic | 15.0% |
| !!! | TTTGGTAATGAATTAAGATT+GGG | + | chr7_2:65490253-65490272 | None:intergenic | 20.0% |
| !!! | TTTTGGTAATGAATTAAGAT+TGG | + | chr7_2:65490254-65490273 | None:intergenic | 20.0% |
| !!! | TATGATTTTGTTTTTTGATC+AGG | - | chr7_2:65490513-65490532 | Msa1069710:CDS | 20.0% |
| !!! | CTAATAATTTTCGTGTTTTT+CGG | + | chr7_2:65490807-65490826 | None:intergenic | 20.0% |
| !!! | TCTGTTAATTTTTTTCCTTT+TGG | - | chr7_2:65491007-65491026 | Msa1069710:intron | 20.0% |
| !!! | CTGTTAATTTTTTTCCTTTT+GGG | - | chr7_2:65491008-65491027 | Msa1069710:intron | 20.0% |
| !! | TTTGGATTAAAAAAGTTTGA+AGG | - | chr7_2:65491071-65491090 | Msa1069710:intron | 20.0% |
| !! | ATAATAGTAATGAGAAGAAA+AGG | + | chr7_2:65491221-65491240 | None:intergenic | 20.0% |
| !! | CAGAAAAAAAAAAAATTCCA+TGG | + | chr7_2:65491387-65491406 | None:intergenic | 20.0% |
| !!! | TTTCATTTTTTTTGGCAATA+GGG | + | chr7_2:65492797-65492816 | None:intergenic | 20.0% |
| !!! | ATTTCATTTTTTTTGGCAAT+AGG | + | chr7_2:65492796-65492815 | None:intergenic | 20.0% |
| !!! | TTGGTAAATAATTTTCAAAG+GGG | + | chr7_2:65492766-65492785 | None:intergenic | 20.0% |
| !!! | ATGTCACTTTTTTTTTTTGA+AGG | + | chr7_2:65492376-65492395 | None:intergenic | 20.0% |
| !!! | AATAAATTAAATTTTGCCAC+TGG | + | chr7_2:65492014-65492033 | None:intergenic | 20.0% |
| !!! | TTTTTTTGAGCAAATTTTTG+AGG | + | chr7_2:65492153-65492172 | None:intergenic | 20.0% |
| !!! | ATGTCACTTTTTTTTTTTGA+AGG | - | chr7_2:65492376-65492395 | Msa1069710:intron | 20.0% |
| !!! | TTGGTAAATAATTTTCAAAG+GGG | - | chr7_2:65492766-65492785 | Msa1069710:intron | 20.0% |
| !!! | ATTTCATTTTTTTTGGCAAT+AGG | - | chr7_2:65492796-65492815 | Msa1069710:intron | 20.0% |
| !!! | TTTCATTTTTTTTGGCAATA+GGG | - | chr7_2:65492797-65492816 | Msa1069710:intron | 20.0% |
| !! | GCAATCAAATAATAATAACA+TGG | + | chr7_2:65492846-65492865 | None:intergenic | 20.0% |
| !! | AAGATGGAAAGATATATAAT+TGG | - | chr7_2:65493013-65493032 | Msa1069710:intron | 20.0% |
| !! | AGATGGAAAGATATATAATT+GGG | - | chr7_2:65493014-65493033 | Msa1069710:intron | 20.0% |
| !!! | TTTTAACTTGATGAATGTTT+TGG | - | chr7_2:65493269-65493288 | Msa1069710:intron | 20.0% |
| !!! | TTTAACTTGATGAATGTTTT+GGG | - | chr7_2:65493270-65493289 | Msa1069710:intron | 20.0% |
| !! | TGAAAAGTTGAGAATATAAT+AGG | + | chr7_2:65493327-65493346 | None:intergenic | 20.0% |
| !! | TTGTTCAAAAAAAAACTATG+AGG | - | chr7_2:65493447-65493466 | Msa1069710:intron | 20.0% |
| !!! | TTTTCTTTTTAACTAATGGA+GGG | - | chr7_2:65493535-65493554 | Msa1069710:intron | 20.0% |
| !! | ATGGAAAATTAAAGTATGTT+TGG | - | chr7_2:65493718-65493737 | Msa1069710:intron | 20.0% |
| !! | ACAATTATGGAAAAAACAAT+TGG | + | chr7_2:65493786-65493805 | None:intergenic | 20.0% |
| !! | ATTATGTATGAAAATTAGCT+TGG | - | chr7_2:65494270-65494289 | Msa1069710:CDS | 20.0% |
| !! | AAAGAAAAAGAGAGAGATTT+TGG | + | chr7_2:65490271-65490290 | None:intergenic | 25.0% |
| ! | TGAATGTTAATGTAATGGTA+TGG | + | chr7_2:65490414-65490433 | None:intergenic | 25.0% |
| ! | ATGGATGAATGTTAATGTAA+TGG | + | chr7_2:65490419-65490438 | None:intergenic | 25.0% |
| ! | AAATAAAATAAGAACGTGCA+TGG | + | chr7_2:65490438-65490457 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTTGATCAGGTT+TGG | - | chr7_2:65490518-65490537 | Msa1069710:CDS | 25.0% |
| ! | TATGAATGTGTTACAATCTA+CGG | - | chr7_2:65490605-65490624 | Msa1069710:intron | 25.0% |
| ! | TCAAATTCAATGAAATCAAG+AGG | + | chr7_2:65490693-65490712 | None:intergenic | 25.0% |
| ! | TTTCATTGAATTTGATGTTC+AGG | - | chr7_2:65490698-65490717 | Msa1069710:intron | 25.0% |
| ! | TGTTTGTCGTAAATAAGTTT+GGG | - | chr7_2:65490935-65490954 | Msa1069710:intron | 25.0% |
| !! | TAAATAAGTTTGGGGTTTAA+GGG | - | chr7_2:65490944-65490963 | Msa1069710:intron | 25.0% |
| !!! | AATTTTTTTCCTTTTGGGTT+TGG | - | chr7_2:65491013-65491032 | Msa1069710:intron | 25.0% |
| ! | TAAAAAATTCCAAACCCAAA+AGG | + | chr7_2:65491025-65491044 | None:intergenic | 25.0% |
| ! | GGTGTAAAAAACATTAATGA+CGG | + | chr7_2:65491247-65491266 | None:intergenic | 25.0% |
| !! | TGGTAAATAATTTTCAAAGG+GGG | + | chr7_2:65492767-65492786 | None:intergenic | 25.0% |
| ! | GACAAAAAAAACTTGAAAGT+GGG | + | chr7_2:65492738-65492757 | None:intergenic | 25.0% |
| ! | TGACAAAAAAAACTTGAAAG+TGG | + | chr7_2:65492737-65492756 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTTTGTCATCTAG+TGG | - | chr7_2:65491476-65491495 | Msa1069710:CDS | 25.0% |
| !!! | AGTTTTTTTTGTCATCTAGT+GGG | - | chr7_2:65491477-65491496 | Msa1069710:CDS | 25.0% |
| ! | AAATGAAGAAAAAGAAGTGA+AGG | - | chr7_2:65491957-65491976 | Msa1069710:intron | 25.0% |
| !!! | CTTATTTGGTGTTATTTTTG+AGG | + | chr7_2:65492185-65492204 | None:intergenic | 25.0% |
| ! | TGACAAAAAAAACTTGAAAG+TGG | - | chr7_2:65492737-65492756 | Msa1069710:intron | 25.0% |
| ! | GACAAAAAAAACTTGAAAGT+GGG | - | chr7_2:65492738-65492757 | Msa1069710:intron | 25.0% |
| !! | TGGTAAATAATTTTCAAAGG+GGG | - | chr7_2:65492767-65492786 | Msa1069710:intron | 25.0% |
| !! | AAGCTTGTTCATAAACAATA+TGG | + | chr7_2:65493134-65493153 | None:intergenic | 25.0% |
| ! | GGTAATTCGATTATTATGTT+TGG | - | chr7_2:65493235-65493254 | Msa1069710:intron | 25.0% |
| !! | ATTTGTTCTAAACAAAAAGG+CGG | + | chr7_2:65493406-65493425 | None:intergenic | 25.0% |
| !!! | CAGGTTTTCTTTTTAACTAA+TGG | - | chr7_2:65493531-65493550 | Msa1069710:intron | 25.0% |
| !!! | GTTTTCTTTTTAACTAATGG+AGG | - | chr7_2:65493534-65493553 | Msa1069710:intron | 25.0% |
| ! | AAATCTATGAAGATTTGAGA+AGG | - | chr7_2:65493562-65493581 | Msa1069710:intron | 25.0% |
| !!! | GAATTGTTTCTGAGATTAAA+GGG | - | chr7_2:65493634-65493653 | Msa1069710:intron | 25.0% |
| !!! | TACATGTTATTGGTCTTTTT+TGG | - | chr7_2:65493759-65493778 | Msa1069710:CDS | 25.0% |
| ! | CATTACATTCAACACAATTA+TGG | + | chr7_2:65493799-65493818 | None:intergenic | 25.0% |
| !!! | AGATGGGTTTTAATTTGATT+TGG | - | chr7_2:65494093-65494112 | Msa1069710:CDS | 25.0% |
| !!! | GATGGGTTTTAATTTGATTT+GGG | - | chr7_2:65494094-65494113 | Msa1069710:CDS | 25.0% |
| !!! | ATGGGTTTTAATTTGATTTG+GGG | - | chr7_2:65494095-65494114 | Msa1069710:CDS | 25.0% |
| ! | ATTAGACACATAGTAGAATT+TGG | - | chr7_2:65494172-65494191 | Msa1069710:CDS | 25.0% |
| ! | TTAGACACATAGTAGAATTT+GGG | - | chr7_2:65494173-65494192 | Msa1069710:CDS | 25.0% |
| ! | TACAAATGATTAAGCATTCA+TGG | + | chr7_2:65494206-65494225 | None:intergenic | 25.0% |
| GGTATTTATTTGAGGGAATT+TGG | + | chr7_2:65490179-65490198 | None:intergenic | 30.0% | |
| !! | CATAATGGAGTTTTCTTTGA+TGG | + | chr7_2:65490646-65490665 | None:intergenic | 30.0% |
| AGCAGCATTAAAAGACATAA+TGG | + | chr7_2:65490661-65490680 | None:intergenic | 30.0% | |
| TATTTACGACAAACACCATA+GGG | + | chr7_2:65490930-65490949 | None:intergenic | 30.0% | |
| TTATTTACGACAAACACCAT+AGG | + | chr7_2:65490931-65490950 | None:intergenic | 30.0% | |
| GTGTTTGTCGTAAATAAGTT+TGG | - | chr7_2:65490934-65490953 | Msa1069710:intron | 30.0% | |
| GTTTGTCGTAAATAAGTTTG+GGG | - | chr7_2:65490936-65490955 | Msa1069710:intron | 30.0% | |
| ! | GTAAATAAGTTTGGGGTTTA+AGG | - | chr7_2:65490943-65490962 | Msa1069710:intron | 30.0% |
| !!! | ATGTTTTTTACACCGTCAAT+TGG | - | chr7_2:65491253-65491272 | Msa1069710:intron | 30.0% |
| !! | TGATGATTGTGATTTGTTGA+CGG | - | chr7_2:65491332-65491351 | Msa1069710:CDS | 30.0% |
| TTTCATTTGACAGAAAATGG+CGG | + | chr7_2:65492646-65492665 | None:intergenic | 30.0% | |
| GCATTTCATTTGACAGAAAA+TGG | + | chr7_2:65492643-65492662 | None:intergenic | 30.0% | |
| ! | TTTTTCATGTGTAGCTTGAA+AGG | + | chr7_2:65492333-65492352 | None:intergenic | 30.0% |
| GCTTCACAAATTCAACTAAT+TGG | + | chr7_2:65491989-65492008 | None:intergenic | 30.0% | |
| ! | TTTTTCATGTGTAGCTTGAA+AGG | - | chr7_2:65492333-65492352 | Msa1069710:intron | 30.0% |
| GCATTTCATTTGACAGAAAA+TGG | - | chr7_2:65492643-65492662 | Msa1069710:intron | 30.0% | |
| TTTCATTTGACAGAAAATGG+CGG | - | chr7_2:65492646-65492665 | Msa1069710:intron | 30.0% | |
| ! | ATTGCTTTGAGTTAATTGTG+AGG | - | chr7_2:65492861-65492880 | Msa1069710:intron | 30.0% |
| ! | TTGCTTTGAGTTAATTGTGA+GGG | - | chr7_2:65492862-65492881 | Msa1069710:intron | 30.0% |
| TTATCAGAGTTTCTTTCCTA+TGG | - | chr7_2:65492940-65492959 | Msa1069710:intron | 30.0% | |
| TATCAGAGTTTCTTTCCTAT+GGG | - | chr7_2:65492941-65492960 | Msa1069710:intron | 30.0% | |
| TTGGTGAGAAAAACAAAAGA+TGG | - | chr7_2:65492997-65493016 | Msa1069710:intron | 30.0% | |
| TTTGAGAAATGCTTCTTGAA+GGG | + | chr7_2:65493067-65493086 | None:intergenic | 30.0% | |
| TCAATGTTAAAACCCAAAGA+AGG | + | chr7_2:65493096-65493115 | None:intergenic | 30.0% | |
| !! | TTACCTTTAAAATGGCTTGA+AGG | + | chr7_2:65493170-65493189 | None:intergenic | 30.0% |
| CATCACAATTTCATCAAGAA+TGG | + | chr7_2:65493214-65493233 | None:intergenic | 30.0% | |
| TTCTTGATGAAATTGTGATG+TGG | - | chr7_2:65493214-65493233 | Msa1069710:intron | 30.0% | |
| ! | TTACTGATTATGCTAAGGAT+AGG | - | chr7_2:65493301-65493320 | Msa1069710:intron | 30.0% |
| TAAATTGCAAAGCACATATC+CGG | - | chr7_2:65493371-65493390 | Msa1069710:intron | 30.0% | |
| !!! | CTATGAGGAAGTTGTTTTTT+TGG | - | chr7_2:65493462-65493481 | Msa1069710:intron | 30.0% |
| TATGTGAGATTCTTCTAACA+TGG | - | chr7_2:65493489-65493508 | Msa1069710:intron | 30.0% | |
| ATGTGAGATTCTTCTAACAT+GGG | - | chr7_2:65493490-65493509 | Msa1069710:intron | 30.0% | |
| !! | GGAATTGTTTCTGAGATTAA+AGG | - | chr7_2:65493633-65493652 | Msa1069710:intron | 30.0% |
| CTGAGATTAAAGGGATATTT+AGG | - | chr7_2:65493643-65493662 | Msa1069710:intron | 30.0% | |
| ATATGTTAGAAGAGAGAGAT+TGG | + | chr7_2:65493700-65493719 | None:intergenic | 30.0% | |
| AATCTCTCTCTTCTAACATA+TGG | - | chr7_2:65493699-65493718 | Msa1069710:intron | 30.0% | |
| AATAACATGTAACATGAGAG+TGG | + | chr7_2:65493750-65493769 | None:intergenic | 30.0% | |
| ACTCTCATGTTACATGTTAT+TGG | - | chr7_2:65493749-65493768 | Msa1069710:CDS | 30.0% | |
| !!! | GATACTGATATTTGCTGTTT+TGG | - | chr7_2:65493824-65493843 | Msa1069710:CDS | 30.0% |
| ! | TTTTGTGCAAGAAATAACAG+AGG | - | chr7_2:65493919-65493938 | Msa1069710:intron | 30.0% |
| !! | CTTTAAAGCAATAGCAATTG+TGG | + | chr7_2:65494067-65494086 | None:intergenic | 30.0% |
| !! | TTGCTTTAAAGAAGAAGAGA+TGG | - | chr7_2:65494076-65494095 | Msa1069710:CDS | 30.0% |
| !! | TGCTTTAAAGAAGAAGAGAT+GGG | - | chr7_2:65494077-65494096 | Msa1069710:CDS | 30.0% |
| AAGAGTTAATGTAAAAGGAG+AGG | + | chr7_2:65494150-65494169 | None:intergenic | 30.0% | |
| TAGACACATAGTAGAATTTG+GGG | - | chr7_2:65494174-65494193 | Msa1069710:CDS | 30.0% | |
| ! | GATTTTCTTCTTTTCACTTG+AGG | - | chr7_2:65494232-65494251 | Msa1069710:CDS | 30.0% |
| ! | ATGTATGAAAATTAGCTTGG+AGG | - | chr7_2:65494273-65494292 | Msa1069710:CDS | 30.0% |
| ! | ACCTTGGGGTATTTATTTGA+GGG | + | chr7_2:65490186-65490205 | None:intergenic | 35.0% |
| ! | AACCTTGGGGTATTTATTTG+AGG | + | chr7_2:65490187-65490206 | None:intergenic | 35.0% |
| ! | ATGATGATGAAGATGAAGGT+GGG | + | chr7_2:65490215-65490234 | None:intergenic | 35.0% |
| ! | GATGATGATGATGAAGATGA+AGG | + | chr7_2:65490219-65490238 | None:intergenic | 35.0% |
| TTTCTCTCTTTCACCTAACA+TGG | - | chr7_2:65490288-65490307 | Msa1069710:three_prime_UTR | 35.0% | |
| ATGCCAAAGTTCGTTGTAAT+TGG | - | chr7_2:65490567-65490586 | Msa1069710:CDS | 35.0% | |
| TGTCCAATTACAACGAACTT+TGG | + | chr7_2:65490573-65490592 | None:intergenic | 35.0% | |
| TTCGTTGTAATTGGACATAG+AGG | - | chr7_2:65490576-65490595 | Msa1069710:CDS | 35.0% | |
| GTAATTGGACATAGAGGAAA+CGG | - | chr7_2:65490582-65490601 | Msa1069710:CDS | 35.0% | |
| ATGTGTTACAATCTACGGAT+CGG | - | chr7_2:65490610-65490629 | Msa1069710:intron | 35.0% | |
| ! | GCATGTTCTTTTTCCAGTTT+CGG | - | chr7_2:65490850-65490869 | Msa1069710:CDS | 35.0% |
| ATATGTTCAGATCAGATACG+CGG | + | chr7_2:65490879-65490898 | None:intergenic | 35.0% | |
| AAACACCATAGGGGTAAAAT+AGG | + | chr7_2:65490920-65490939 | None:intergenic | 35.0% | |
| ATTTACGACAAACACCATAG+GGG | + | chr7_2:65490929-65490948 | None:intergenic | 35.0% | |
| ! | TTAAGGGTTTTTCTGTGGTT+TGG | - | chr7_2:65490960-65490979 | Msa1069710:intron | 35.0% |
| AATCATCGTGGAAAATGACT+GGG | + | chr7_2:65491171-65491190 | None:intergenic | 35.0% | |
| TAATCATCGTGGAAAATGAC+TGG | + | chr7_2:65491172-65491191 | None:intergenic | 35.0% | |
| TGACGATTATGACCAATTGA+CGG | + | chr7_2:65491268-65491287 | None:intergenic | 35.0% | |
| CAACAGATCACAATCAGTTA+GGG | + | chr7_2:65491363-65491382 | None:intergenic | 35.0% | |
| TCAACAGATCACAATCAGTT+AGG | + | chr7_2:65491364-65491383 | None:intergenic | 35.0% | |
| ! | AACTTGAAAGTGGGTCATTT+TGG | + | chr7_2:65492747-65492766 | None:intergenic | 35.0% |
| CTCATTACAGCCATTTCAAA+TGG | - | chr7_2:65491500-65491519 | Msa1069710:CDS | 35.0% | |
| ATTACAGCCATTTCAAATGG+CGG | - | chr7_2:65491503-65491522 | Msa1069710:CDS | 35.0% | |
| ATTACAGCCATTTCAAATGG+CGG | + | chr7_2:65491503-65491522 | None:intergenic | 35.0% | |
| CTCATTACAGCCATTTCAAA+TGG | + | chr7_2:65491500-65491519 | None:intergenic | 35.0% | |
| ! | AACTTGAAAGTGGGTCATTT+TGG | - | chr7_2:65492747-65492766 | Msa1069710:intron | 35.0% |
| !!! | AGTTAATTGTGAGGGCATTT+TGG | - | chr7_2:65492870-65492889 | Msa1069710:intron | 35.0% |
| !!! | GTTAATTGTGAGGGCATTTT+GGG | - | chr7_2:65492871-65492890 | Msa1069710:intron | 35.0% |
| !!! | TTAATTGTGAGGGCATTTTG+GGG | - | chr7_2:65492872-65492891 | Msa1069710:intron | 35.0% |
| ! | TTTTTGCAGGGTAATGTGTT+TGG | - | chr7_2:65492895-65492914 | Msa1069710:intron | 35.0% |
| ! | TTTTGCAGGGTAATGTGTTT+GGG | - | chr7_2:65492896-65492915 | Msa1069710:intron | 35.0% |
| AACTCTGATAAACACAACTC+AGG | + | chr7_2:65492931-65492950 | None:intergenic | 35.0% | |
| ! | AGGAATGGAAGGAAAAGTTT+TGG | - | chr7_2:65492978-65492997 | Msa1069710:intron | 35.0% |
| ! | CTTTGAGAAATGCTTCTTGA+AGG | + | chr7_2:65493068-65493087 | None:intergenic | 35.0% |
| TCTCAAAGTTGAACCTTCTT+TGG | - | chr7_2:65493080-65493099 | Msa1069710:intron | 35.0% | |
| CTCAAAGTTGAACCTTCTTT+GGG | - | chr7_2:65493081-65493100 | Msa1069710:intron | 35.0% | |
| !! | TGTCCTTCAAGCCATTTTAA+AGG | - | chr7_2:65493164-65493183 | Msa1069710:intron | 35.0% |
| ! | GGTTGTTACTGATTATGCTA+AGG | - | chr7_2:65493296-65493315 | Msa1069710:intron | 35.0% |
| !!! | AACATGGGTTGGTGATTTTT+TGG | - | chr7_2:65493505-65493524 | Msa1069710:intron | 35.0% |
| AGATTTGAGAAGGAACTCTT+TGG | - | chr7_2:65493572-65493591 | Msa1069710:intron | 35.0% | |
| TTGAAACTCAGTTTGGAGAA+TGG | - | chr7_2:65493603-65493622 | Msa1069710:intron | 35.0% | |
| !! | AGTTTGGAGAATGGATTGAA+AGG | - | chr7_2:65493612-65493631 | Msa1069710:intron | 35.0% |
| AAAGGGATATTTAGGAATCC+TGG | - | chr7_2:65493651-65493670 | Msa1069710:intron | 35.0% | |
| ! | TTCTTTTCACTTGAGGATGA+AGG | - | chr7_2:65494239-65494258 | Msa1069710:CDS | 35.0% |
| TCCCTCAAATAAATACCCCA+AGG | - | chr7_2:65490182-65490201 | Msa1069710:three_prime_UTR | 40.0% | |
| ! | GATGATGATGAAGATGAAGG+TGG | + | chr7_2:65490216-65490235 | None:intergenic | 40.0% |
| !! | ATTTTCAGGGACAAGATCGA+GGG | + | chr7_2:65490347-65490366 | None:intergenic | 40.0% |
| !!! | TGAACATATGCCGCTTTTTC+CGG | - | chr7_2:65490890-65490909 | Msa1069710:CDS | 40.0% |
| AATAGGAAACCCGGAAAAAG+CGG | + | chr7_2:65490903-65490922 | None:intergenic | 40.0% | |
| TAGGGGTAAAATAGGAAACC+CGG | + | chr7_2:65490912-65490931 | None:intergenic | 40.0% | |
| ! | GGTTTCCTATTTTACCCCTA+TGG | - | chr7_2:65490912-65490931 | Msa1069710:intron | 40.0% |
| ! | TAAAGCAAAAGTGCATCGTG+TGG | - | chr7_2:65491118-65491137 | Msa1069710:CDS | 40.0% |
| !!! | TGCATCGTGTGGTTTTTTGT+AGG | - | chr7_2:65491129-65491148 | Msa1069710:CDS | 40.0% |
| GAGAGTAGATGTAATCATCG+TGG | + | chr7_2:65491183-65491202 | None:intergenic | 40.0% | |
| TGATTGTGATCTGTTGACCA+TGG | - | chr7_2:65491367-65491386 | Msa1069710:CDS | 40.0% | |
| TGAATTTGTGAAGCTTCCAG+TGG | - | chr7_2:65491995-65492014 | Msa1069710:intron | 40.0% | |
| !!! | CTTGATGAATGTTTTGGGAC+AGG | - | chr7_2:65493275-65493294 | Msa1069710:intron | 40.0% |
| AAAAAGGCGGAAAAACTCAC+CGG | + | chr7_2:65493393-65493412 | None:intergenic | 40.0% | |
| GAGATTCTTCTAACATGGGT+TGG | - | chr7_2:65493494-65493513 | Msa1069710:intron | 40.0% | |
| !!! | ATGGGTTGGTGATTTTTTGG+TGG | - | chr7_2:65493508-65493527 | Msa1069710:intron | 40.0% |
| TTTGAGAAGGAACTCTTTGG+AGG | - | chr7_2:65493575-65493594 | Msa1069710:intron | 40.0% | |
| TGACAGTAATGTTCCAGAAG+CGG | - | chr7_2:65493853-65493872 | Msa1069710:CDS | 40.0% | |
| GTTTACATGCAGCACCTAAT+GGG | - | chr7_2:65493875-65493894 | Msa1069710:CDS | 40.0% | |
| TTTACATGCAGCACCTAATG+GGG | - | chr7_2:65493876-65493895 | Msa1069710:CDS | 40.0% | |
| TGTGCAAGAAATAACAGAGG+CGG | - | chr7_2:65493922-65493941 | Msa1069710:intron | 40.0% | |
| ATGATGAAGCCAGCAAAGAT+TGG | - | chr7_2:65493953-65493972 | Msa1069710:intron | 40.0% | |
| TGATGAAGCCAGCAAAGATT+GGG | - | chr7_2:65493954-65493973 | Msa1069710:intron | 40.0% | |
| AAGAAAAGAAAGCTCCTGCT+GGG | + | chr7_2:65494032-65494051 | None:intergenic | 40.0% | |
| AAAGAAAAGAAAGCTCCTGC+TGG | + | chr7_2:65494033-65494052 | None:intergenic | 40.0% | |
| GGGAACACTGATGATAGTTT+AGG | - | chr7_2:65494115-65494134 | Msa1069710:CDS | 40.0% | |
| TCACTTGAGGATGAAGGAAA+TGG | - | chr7_2:65494245-65494264 | Msa1069710:CDS | 40.0% | |
| !! | GATTTTCAGGGACAAGATCG+AGG | + | chr7_2:65490348-65490367 | None:intergenic | 45.0% |
| TCAGGTTTGGAGATGAGCAA+TGG | - | chr7_2:65490531-65490550 | Msa1069710:CDS | 45.0% | |
| TTGGAGATGAGCAATGGTGA+TGG | - | chr7_2:65490537-65490556 | Msa1069710:CDS | 45.0% | |
| !!! | GAACATATGCCGCTTTTTCC+GGG | - | chr7_2:65490891-65490910 | Msa1069710:CDS | 45.0% |
| ! | GGGGTTTAAGGGTTTTTCTG+TGG | - | chr7_2:65490955-65490974 | Msa1069710:intron | 45.0% |
| AATGACTGGGCAGTCATCTT+TGG | + | chr7_2:65491158-65491177 | None:intergenic | 45.0% | |
| GCCATTTCAAATGGCGGTAA+TGG | - | chr7_2:65491509-65491528 | Msa1069710:CDS | 45.0% | |
| GCCATTACCGCCATTTGAAA+TGG | + | chr7_2:65492695-65492714 | None:intergenic | 45.0% | |
| ATTTGACAGAAAATGGCGGC+TGG | + | chr7_2:65492650-65492669 | None:intergenic | 45.0% | |
| ACTGTCTCCTGTTCGATTCT+GGG | + | chr7_2:65492548-65492567 | None:intergenic | 45.0% | |
| AACTGTCTCCTGTTCGATTC+TGG | + | chr7_2:65492547-65492566 | None:intergenic | 45.0% | |
| AACTGTCTCCTGTTCGATTC+TGG | - | chr7_2:65492547-65492566 | Msa1069710:intron | 45.0% | |
| ACTGTCTCCTGTTCGATTCT+GGG | - | chr7_2:65492548-65492567 | Msa1069710:intron | 45.0% | |
| ATTTGACAGAAAATGGCGGC+TGG | - | chr7_2:65492650-65492669 | Msa1069710:intron | 45.0% | |
| GCCATTACCGCCATTTGAAA+TGG | - | chr7_2:65492695-65492714 | Msa1069710:intron | 45.0% | |
| GCCATTTCAAATGGCGGTAA+TGG | + | chr7_2:65491509-65491528 | None:intergenic | 45.0% | |
| !!! | GGCATTTTGGGGTTTTTGCA+GGG | - | chr7_2:65492883-65492902 | Msa1069710:intron | 45.0% |
| TTCCTATGGGCTTCAAAGAG+AGG | - | chr7_2:65492954-65492973 | Msa1069710:intron | 45.0% | |
| !!! | GTTGGTGATTTTTTGGTGGC+AGG | - | chr7_2:65493512-65493531 | Msa1069710:intron | 45.0% |
| !! | GGAGGCTTTGAAACTCAGTT+TGG | - | chr7_2:65493596-65493615 | Msa1069710:intron | 45.0% |
| TTGATCTTGCTTACAGCTCC+AGG | + | chr7_2:65493672-65493691 | None:intergenic | 45.0% | |
| TGGAGCTGTAAGCAAGATCA+AGG | - | chr7_2:65493671-65493690 | Msa1069710:intron | 45.0% | |
| GGTTTACATGCAGCACCTAA+TGG | - | chr7_2:65493874-65493893 | Msa1069710:CDS | 45.0% | |
| AGCACCTAATGGGGATTGAT+GGG | - | chr7_2:65493885-65493904 | Msa1069710:CDS | 45.0% | |
| AGAAATAACAGAGGCGGTTG+CGG | - | chr7_2:65493928-65493947 | Msa1069710:intron | 45.0% | |
| GATGAAGCCAGCAAAGATTG+GGG | - | chr7_2:65493955-65493974 | Msa1069710:intron | 45.0% | |
| ! | AAAGCCTCAATTTTCCCAGC+AGG | - | chr7_2:65494015-65494034 | Msa1069710:intron | 45.0% |
| AAGGTGGGAGAGAAACCTTG+GGG | + | chr7_2:65490200-65490219 | None:intergenic | 50.0% | |
| GAAGGTGGGAGAGAAACCTT+GGG | + | chr7_2:65490201-65490220 | None:intergenic | 50.0% | |
| TGAAGGTGGGAGAGAAACCT+TGG | + | chr7_2:65490202-65490221 | None:intergenic | 50.0% | |
| !! | ACGGCTTTGAGAGCCATGTT+AGG | + | chr7_2:65490304-65490323 | None:intergenic | 50.0% |
| AAGATCGAGGGAAGGGACAT+CGG | + | chr7_2:65490335-65490354 | None:intergenic | 50.0% | |
| ! | GGGAAAGGGAGGGATTTTCA+GGG | + | chr7_2:65490360-65490379 | None:intergenic | 50.0% |
| ! | AGGGAAAGGGAGGGATTTTC+AGG | + | chr7_2:65490361-65490380 | None:intergenic | 50.0% |
| TACGTACCGCTAGGAAAACG+GGG | + | chr7_2:65490391-65490410 | None:intergenic | 50.0% | |
| GTACGTACCGCTAGGAAAAC+GGG | + | chr7_2:65490392-65490411 | None:intergenic | 50.0% | |
| GGTACGTACCGCTAGGAAAA+CGG | + | chr7_2:65490393-65490412 | None:intergenic | 50.0% | |
| ATGGTATGGTACGTACCGCT+AGG | + | chr7_2:65490400-65490419 | None:intergenic | 50.0% | |
| TACGTTGCAGTTGCATGCAG+AGG | + | chr7_2:65490477-65490496 | None:intergenic | 50.0% | |
| TGCCACGTGTCAACCAAAAG+AGG | - | chr7_2:65491585-65491604 | Msa1069710:intron | 50.0% | |
| GCCACGTGTCAACCAAAAGA+GGG | - | chr7_2:65491586-65491605 | Msa1069710:intron | 50.0% | |
| CCACGTGTCAACCAAAAGAG+GGG | - | chr7_2:65491587-65491606 | Msa1069710:intron | 50.0% | |
| TCAGTTGGTCGAGCGTTTGT+TGG | + | chr7_2:65492517-65492536 | None:intergenic | 50.0% | |
| ACAAGTGTGAGCAGCTCAGT+TGG | + | chr7_2:65492502-65492521 | None:intergenic | 50.0% | |
| ACAAGTGTGAGCAGCTCAGT+TGG | - | chr7_2:65492502-65492521 | Msa1069710:intron | 50.0% | |
| TCAGTTGGTCGAGCGTTTGT+TGG | - | chr7_2:65492517-65492536 | Msa1069710:intron | 50.0% | |
| CCACGTGTCAACCAAAAGAG+GGG | + | chr7_2:65491587-65491606 | None:intergenic | 50.0% | |
| GCCACGTGTCAACCAAAAGA+GGG | + | chr7_2:65491586-65491605 | None:intergenic | 50.0% | |
| TGCCACGTGTCAACCAAAAG+AGG | + | chr7_2:65491585-65491604 | None:intergenic | 50.0% | |
| !!! | GGGCATTTTGGGGTTTTTGC+AGG | - | chr7_2:65492882-65492901 | Msa1069710:intron | 50.0% |
| !! | TGCCTCTCTTTGAAGCCCAT+AGG | + | chr7_2:65492959-65492978 | None:intergenic | 50.0% |
| TATGGGCTTCAAAGAGAGGC+AGG | - | chr7_2:65492958-65492977 | Msa1069710:intron | 50.0% | |
| GCTTCAAAGAGAGGCAGGAA+TGG | - | chr7_2:65492963-65492982 | Msa1069710:intron | 50.0% | |
| CAAAGAGAGGCAGGAATGGA+AGG | - | chr7_2:65492967-65492986 | Msa1069710:intron | 50.0% | |
| ! | CGAACAAGTATCGCTGCATC+AGG | + | chr7_2:65493351-65493370 | None:intergenic | 50.0% |
| ! | GAGAAGGAACTCTTTGGAGG+AGG | - | chr7_2:65493578-65493597 | Msa1069710:intron | 50.0% |
| TGCTGCATGTAAACCGCTTC+TGG | + | chr7_2:65493869-65493888 | None:intergenic | 50.0% | |
| CAGCACCTAATGGGGATTGA+TGG | - | chr7_2:65493884-65493903 | Msa1069710:CDS | 50.0% | |
| GCACCTAATGGGGATTGATG+GGG | - | chr7_2:65493886-65493905 | Msa1069710:CDS | 50.0% | |
| TCACCCCATCAATCCCCATT+AGG | + | chr7_2:65493892-65493911 | None:intergenic | 50.0% | |
| TCTTCCTCCCCAATCTTTGC+TGG | + | chr7_2:65493965-65493984 | None:intergenic | 50.0% | |
| AGCAAAGATTGGGGAGGAAG+AGG | - | chr7_2:65493964-65493983 | Msa1069710:intron | 50.0% | |
| GCAAAGATTGGGGAGGAAGA+GGG | - | chr7_2:65493965-65493984 | Msa1069710:intron | 50.0% | |
| AGGAAGAGGGTTTGGCTGAA+GGG | - | chr7_2:65493978-65493997 | Msa1069710:intron | 50.0% | |
| AGGGTTTGGCTGAAGGGATT+GGG | - | chr7_2:65493984-65494003 | Msa1069710:intron | 50.0% | |
| AGCTCCTGCTGGGAAAATTG+AGG | + | chr7_2:65494022-65494041 | None:intergenic | 50.0% | |
| CAGGGACAAGATCGAGGGAA+GGG | + | chr7_2:65490342-65490361 | None:intergenic | 55.0% | |
| TCAGGGACAAGATCGAGGGA+AGG | + | chr7_2:65490343-65490362 | None:intergenic | 55.0% | |
| ACGTACCGCTAGGAAAACGG+GGG | + | chr7_2:65490390-65490409 | None:intergenic | 55.0% | |
| !! | CCCCTCTTTTGGTTGACACG+TGG | + | chr7_2:65492618-65492637 | None:intergenic | 55.0% |
| GACTCCACCCAGAATCGAAC+AGG | - | chr7_2:65491650-65491669 | Msa1069710:intron | 55.0% | |
| GTCTCCTGTTCGATTCTGGG+TGG | + | chr7_2:65492551-65492570 | None:intergenic | 55.0% | |
| ! | GTTGGTCGAGCGTTTGTTGG+TGG | + | chr7_2:65492520-65492539 | None:intergenic | 55.0% |
| ! | GTTGGTCGAGCGTTTGTTGG+TGG | - | chr7_2:65492520-65492539 | Msa1069710:intron | 55.0% |
| GTCTCCTGTTCGATTCTGGG+TGG | - | chr7_2:65492551-65492570 | Msa1069710:intron | 55.0% | |
| GACTCCACCCAGAATCGAAC+AGG | + | chr7_2:65491650-65491669 | None:intergenic | 55.0% | |
| !! | CCCCTCTTTTGGTTGACACG+TGG | - | chr7_2:65492618-65492637 | Msa1069710:intron | 55.0% |
| GAAGCCAGCAAAGATTGGGG+AGG | - | chr7_2:65493958-65493977 | Msa1069710:intron | 55.0% | |
| GATTGGGGAGGAAGAGGGTT+TGG | - | chr7_2:65493970-65493989 | Msa1069710:intron | 55.0% | |
| GAGGAAGAGGGTTTGGCTGA+AGG | - | chr7_2:65493977-65493996 | Msa1069710:intron | 55.0% | |
| GAGGGTTTGGCTGAAGGGAT+TGG | - | chr7_2:65493983-65494002 | Msa1069710:intron | 55.0% | |
| AGGGACATCGGAGACGTGGA+CGG | + | chr7_2:65490323-65490342 | None:intergenic | 60.0% | |
| AGGAAAACGGGGGGAGAGGA+GGG | + | chr7_2:65490380-65490399 | None:intergenic | 60.0% | |
| TAGGAAAACGGGGGGAGAGG+AGG | + | chr7_2:65490381-65490400 | None:intergenic | 60.0% | |
| ! | CTCTCCCCCCGTTTTCCTAG+CGG | - | chr7_2:65490382-65490401 | Msa1069710:CDS | 60.0% |
| CGTACCGCTAGGAAAACGGG+GGG | + | chr7_2:65490389-65490408 | None:intergenic | 60.0% | |
| AGATACGCGGCGACCGAAAC+TGG | + | chr7_2:65490866-65490885 | None:intergenic | 60.0% | |
| ! | GTCAACCAAAAGAGGGGCGC+TGG | - | chr7_2:65491593-65491612 | Msa1069710:intron | 60.0% |
| ! | ATCAGCCAGCGCCCCTCTTT+TGG | + | chr7_2:65492607-65492626 | None:intergenic | 60.0% |
| !! | AAAAGAGGGGCGCTGGCTGA+TGG | - | chr7_2:65491600-65491619 | Msa1069710:intron | 60.0% |
| !! | AAAAGAGGGGCGCTGGCTGA+TGG | + | chr7_2:65491600-65491619 | None:intergenic | 60.0% |
| ! | ATCAGCCAGCGCCCCTCTTT+TGG | - | chr7_2:65492607-65492626 | Msa1069710:intron | 60.0% |
| ! | GTCAACCAAAAGAGGGGCGC+TGG | + | chr7_2:65491593-65491612 | None:intergenic | 60.0% |
| GGGAAGGGACATCGGAGACG+TGG | + | chr7_2:65490327-65490346 | None:intergenic | 65.0% | |
| GGGGAGAGGAGGGAAAGGGA+GGG | + | chr7_2:65490370-65490389 | None:intergenic | 65.0% | |
| ACGGGGGGAGAGGAGGGAAA+GGG | + | chr7_2:65490374-65490393 | None:intergenic | 65.0% | |
| AACGGGGGGAGAGGAGGGAA+AGG | + | chr7_2:65490375-65490394 | None:intergenic | 65.0% | |
| CGCTAGGAAAACGGGGGGAG+AGG | + | chr7_2:65490384-65490403 | None:intergenic | 65.0% | |
| GGGGGAGAGGAGGGAAAGGG+AGG | + | chr7_2:65490371-65490390 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 65490166 | 65494298 | 65490166 | ID=Msa1069710;Name=Msa1069710 |
| chr7_2 | mRNA | 65490166 | 65494298 | 65490166 | ID=Msa1069710-mRNA-1;Parent=Msa1069710;Name=Msa1069710-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.8|0.83|1|1|1|6|214|407 |
| chr7_2 | exon | 65490166 | 65490605 | 65490166 | ID=Msa1069710-mRNA-1:exon:13825;Parent=Msa1069710-mRNA-1 |
| chr7_2 | exon | 65490734 | 65490930 | 65490734 | ID=Msa1069710-mRNA-1:exon:13824;Parent=Msa1069710-mRNA-1 |
| chr7_2 | exon | 65491072 | 65491167 | 65491072 | ID=Msa1069710-mRNA-1:exon:13823;Parent=Msa1069710-mRNA-1 |
| chr7_2 | exon | 65491279 | 65491560 | 65491279 | ID=Msa1069710-mRNA-1:exon:13822;Parent=Msa1069710-mRNA-1 |
| chr7_2 | exon | 65493745 | 65493929 | 65493745 | ID=Msa1069710-mRNA-1:exon:13821;Parent=Msa1069710-mRNA-1 |
| chr7_2 | exon | 65494061 | 65494298 | 65494061 | ID=Msa1069710-mRNA-1:exon:13820;Parent=Msa1069710-mRNA-1 |
| chr7_2 | CDS | 65494061 | 65494298 | 65494061 | ID=Msa1069710-mRNA-1:cds;Parent=Msa1069710-mRNA-1 |
| chr7_2 | CDS | 65493745 | 65493929 | 65493745 | ID=Msa1069710-mRNA-1:cds;Parent=Msa1069710-mRNA-1 |
| chr7_2 | CDS | 65491279 | 65491560 | 65491279 | ID=Msa1069710-mRNA-1:cds;Parent=Msa1069710-mRNA-1 |
| chr7_2 | CDS | 65491072 | 65491167 | 65491072 | ID=Msa1069710-mRNA-1:cds;Parent=Msa1069710-mRNA-1 |
| chr7_2 | CDS | 65490734 | 65490930 | 65490734 | ID=Msa1069710-mRNA-1:cds;Parent=Msa1069710-mRNA-1 |
| chr7_2 | CDS | 65490380 | 65490605 | 65490380 | ID=Msa1069710-mRNA-1:cds;Parent=Msa1069710-mRNA-1 |
| chr7_2 | three_prime_UTR | 65490166 | 65490379 | 65490166 | ID=Msa1069710-mRNA-1:three_prime_utr;Parent=Msa1069710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
