Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070490 | XP_003624584.2 | 79.458 | 443 | 8 | 2 | 1 | 360 | 36 | 478 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070490 | sp|P52914|NTPA_PEA | 73.600 | 375 | 65 | 2 | 19 | 360 | 82 | 455 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070490 | G7KZC5 | 79.458 | 443 | 8 | 2 | 1 | 360 | 36 | 478 | 0.0 | 689 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1031400 | Msa1070490 | 0.808854 | 2.524375e-50 | -8.615850e-47 |
| Msa1041560 | Msa1070490 | 0.933239 | 2.540558e-95 | -8.615850e-47 |
| Msa1070490 | Msa1101140 | 0.952848 | 9.978920e-111 | -8.615850e-47 |
| Msa1070490 | Msa1101620 | 0.806266 | 8.940743e-50 | -8.615850e-47 |
| Msa1070490 | Msa1158350 | 0.904662 | 9.705995e-80 | -8.615850e-47 |
| Msa1070490 | Msa1166460 | 0.937781 | 1.980158e-98 | -8.615850e-47 |
| Msa1070490 | Msa1338520 | 0.964982 | 5.115377e-124 | -8.615850e-47 |
| Msa0243890 | Msa1070490 | 0.803227 | 3.854545e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070490 | MtrunA17_Chr7g0252891 | 79.458 | 443 | 8 | 2 | 1 | 360 | 36 | 478 | 0.0 | 689 |
| Msa1070490 | MtrunA17_Chr4g0015031 | 72.686 | 443 | 37 | 3 | 1 | 360 | 25 | 466 | 0.0 | 600 |
| Msa1070490 | MtrunA17_Chr7g0252881 | 76.000 | 375 | 56 | 2 | 19 | 360 | 83 | 456 | 0.0 | 565 |
| Msa1070490 | MtrunA17_Chr7g0252911 | 65.241 | 374 | 95 | 3 | 20 | 360 | 84 | 455 | 1.09e-173 | 491 |
| Msa1070490 | MtrunA17_Chr7g0252921 | 61.818 | 385 | 110 | 4 | 10 | 359 | 71 | 453 | 4.78e-158 | 451 |
| Msa1070490 | MtrunA17_Chr7g0252861 | 54.945 | 364 | 126 | 5 | 20 | 349 | 107 | 466 | 5.76e-127 | 372 |
| Msa1070490 | MtrunA17_Chr6g0461671 | 53.050 | 377 | 139 | 5 | 10 | 350 | 108 | 482 | 2.41e-124 | 366 |
| Msa1070490 | MtrunA17_Chr7g0252941 | 57.955 | 176 | 72 | 2 | 146 | 321 | 6 | 179 | 2.34e-58 | 187 |
| Msa1070490 | MtrunA17_Chr7g0252901 | 62.037 | 108 | 31 | 3 | 253 | 360 | 3 | 100 | 6.40e-38 | 131 |
| Msa1070490 | MtrunA17_Chr5g0417201 | 23.846 | 390 | 200 | 14 | 16 | 341 | 113 | 469 | 5.82e-15 | 75.9 |
| Msa1070490 | MtrunA17_Chr7g0252931 | 57.627 | 59 | 23 | 1 | 92 | 150 | 14 | 70 | 2.90e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070490 | AT5G18280.1 | 51.330 | 376 | 145 | 5 | 10 | 349 | 98 | 471 | 7.14e-123 | 362 |
| Msa1070490 | AT3G04080.1 | 49.189 | 370 | 152 | 4 | 14 | 349 | 103 | 470 | 1.38e-114 | 341 |
| Msa1070490 | AT1G14230.1 | 26.667 | 390 | 203 | 13 | 12 | 347 | 114 | 474 | 1.31e-26 | 110 |
| Msa1070490 | AT1G14250.1 | 26.479 | 355 | 183 | 12 | 16 | 315 | 108 | 439 | 2.89e-24 | 103 |
| Msa1070490 | AT2G02970.1 | 24.874 | 398 | 219 | 14 | 8 | 349 | 115 | 488 | 8.49e-22 | 97.1 |
| Msa1070490 | AT1G14240.1 | 25.852 | 352 | 186 | 12 | 16 | 315 | 107 | 435 | 9.18e-22 | 96.7 |
| Msa1070490 | AT1G14240.4 | 25.852 | 352 | 186 | 12 | 16 | 315 | 107 | 435 | 9.18e-22 | 96.7 |
| Msa1070490 | AT1G14240.2 | 25.852 | 352 | 186 | 12 | 16 | 315 | 107 | 435 | 9.18e-22 | 96.7 |
| Msa1070490 | AT1G14240.3 | 25.648 | 347 | 189 | 12 | 16 | 315 | 107 | 431 | 6.56e-19 | 88.2 |
Find 80 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGTTGTTTCCAAGAAAT+TGG | 0.163680 | 7_2:-66677155 | None:intergenic |
| TAACTATGCATTGGGGAAAT+TGG | 0.164398 | 7_2:+66679788 | Msa1070490:CDS |
| GTGAGACTATAAGGTGTATT+TGG | 0.179514 | 7_2:-66680766 | None:intergenic |
| TACATCAATCGTTCAAATTT+AGG | 0.187026 | 7_2:-66681152 | None:intergenic |
| TCTTCTCCATCTGCAACTTT+TGG | 0.192928 | 7_2:-66679906 | None:intergenic |
| ATTTCTTACTCCCAATTTCT+TGG | 0.220318 | 7_2:+66677144 | Msa1070490:CDS |
| AAGGCCAATGCCCCTGCTTC+TGG | 0.233678 | 7_2:+66680446 | Msa1070490:CDS |
| CCCAGAGATAAGAACCTTCT+TGG | 0.271914 | 7_2:-66679358 | None:intergenic |
| CCTTATCAGAATTGCACTTT+TGG | 0.272682 | 7_2:+66680530 | Msa1070490:CDS |
| CCCAAGAAGGTTCTTATCTC+TGG | 0.305526 | 7_2:+66679357 | Msa1070490:CDS |
| AACTATGCATTGGGGAAATT+GGG | 0.305765 | 7_2:+66679789 | Msa1070490:CDS |
| ATATGCTGGAGAAGAATTTA+AGG | 0.312341 | 7_2:+66680427 | Msa1070490:CDS |
| TTGAGAATATTCATAGCTTA+TGG | 0.320552 | 7_2:+66681303 | Msa1070490:three_prime_UTR |
| AAATTTAGGTAACGATGATA+TGG | 0.324810 | 7_2:-66681138 | None:intergenic |
| AATATGATCTCTATGTTCAT+AGG | 0.325141 | 7_2:+66679964 | Msa1070490:CDS |
| AGTACAAGCTTCTTAATGTA+TGG | 0.360656 | 7_2:-66679930 | None:intergenic |
| GATGCAGTTTCTATTATTGA+TGG | 0.366866 | 7_2:+66679332 | Msa1070490:CDS |
| CAGTACGTGTTGCTCGTTGA+TGG | 0.375641 | 7_2:+66680919 | Msa1070490:CDS |
| CATGTTGTTTCCAAGAAATT+GGG | 0.378180 | 7_2:-66677154 | None:intergenic |
| GGTGGAATTTGGAGTGGTGG+AGG | 0.381650 | 7_2:+66680551 | Msa1070490:CDS |
| AAGAAGTGGATAAGTTGATT+TGG | 0.384688 | 7_2:-66680851 | None:intergenic |
| GGACGAAGTGTGAGACTATA+AGG | 0.386803 | 7_2:-66680775 | None:intergenic |
| AAGAAATTGGGAGTAAGAAA+TGG | 0.403150 | 7_2:-66677142 | None:intergenic |
| TTAAAACTGGCTCCAGAAGC+AGG | 0.407764 | 7_2:-66680458 | None:intergenic |
| GTGACAGTTAACTATGCATT+GGG | 0.413726 | 7_2:+66679780 | Msa1070490:CDS |
| GGCTCCAGAAGCAGGGGCAT+TGG | 0.420983 | 7_2:-66680450 | None:intergenic |
| ATCCGCGTATGCACTCAAAC+CGG | 0.434433 | 7_2:-66677642 | None:intergenic |
| TGAGACTATAAGGTGTATTT+GGG | 0.440417 | 7_2:-66680765 | None:intergenic |
| TGGAGTGGTGGAGGAGGAAG+TGG | 0.447986 | 7_2:+66680560 | Msa1070490:CDS |
| GTGTTGCTCGTTGATGGATT+TGG | 0.451160 | 7_2:+66680925 | Msa1070490:CDS |
| ATTATTGATGGAACCCAAGA+AGG | 0.464764 | 7_2:+66679344 | Msa1070490:CDS |
| CCAGAGATAAGAACCTTCTT+GGG | 0.465441 | 7_2:-66679357 | None:intergenic |
| ATCAACTTATCCACTTCTTG+TGG | 0.471679 | 7_2:+66680855 | Msa1070490:CDS |
| TGCATCACGTTGAACGTTGA+AGG | 0.472392 | 7_2:-66679315 | None:intergenic |
| CCAGCTAAAATGCAAGGGTT+AGG | 0.472739 | 7_2:-66680134 | None:intergenic |
| TTTGGTGGAATTTGGAGTGG+TGG | 0.483888 | 7_2:+66680548 | Msa1070490:CDS |
| GTGGAAGCTGCATGGCCTCT+AGG | 0.485627 | 7_2:+66681101 | Msa1070490:CDS |
| TGGAGGTGGATCGGTTCAAA+TGG | 0.485873 | 7_2:+66679848 | Msa1070490:CDS |
| CCAAAAGTGCAATTCTGATA+AGG | 0.489796 | 7_2:-66680530 | None:intergenic |
| ACAGTGGGAGTAATGGATCT+TGG | 0.493110 | 7_2:+66679828 | Msa1070490:CDS |
| CTTTCTGCCTGCTCTAAAAG+TGG | 0.495493 | 7_2:-66677695 | None:intergenic |
| CTTTGGTAGAGAAGCATCTC+GGG | 0.495672 | 7_2:+66680082 | Msa1070490:CDS |
| GGAATTTGGAGTGGTGGAGG+AGG | 0.496019 | 7_2:+66680554 | Msa1070490:CDS |
| AAAGGGACATACACATATGC+TGG | 0.509416 | 7_2:+66680413 | Msa1070490:intron |
| CATAAACAAAACAAGCTCAA+TGG | 0.510507 | 7_2:-66681267 | None:intergenic |
| CCCGCTGTAATCTCTTGCAA+TGG | 0.520889 | 7_2:-66681050 | None:intergenic |
| GGTGACAGTTAACTATGCAT+TGG | 0.523428 | 7_2:+66679779 | Msa1070490:intron |
| CATTAAGAAGCTTGTACTCA+AGG | 0.525184 | 7_2:+66679935 | Msa1070490:CDS |
| TCTTCCAGTTACTTACACTT+TGG | 0.525363 | 7_2:+66680065 | Msa1070490:intron |
| CCAAGAAGGTTCTTATCTCT+GGG | 0.530679 | 7_2:+66679358 | Msa1070490:CDS |
| TCCGCGTATGCACTCAAACC+GGG | 0.534325 | 7_2:-66677641 | None:intergenic |
| TAAAACTGGCTCCAGAAGCA+GGG | 0.545057 | 7_2:-66680457 | None:intergenic |
| TATAGTAGAATATGTTTGCA+TGG | 0.546202 | 7_2:+66680885 | Msa1070490:CDS |
| ACTTTGGTAGAGAAGCATCT+CGG | 0.551865 | 7_2:+66680081 | Msa1070490:CDS |
| ACTATGCATTGGGGAAATTG+GGG | 0.553135 | 7_2:+66679790 | Msa1070490:CDS |
| TCAAATCCAGCTAAAATGCA+AGG | 0.555070 | 7_2:-66680140 | None:intergenic |
| GGAGTAATGGATCTTGGAGG+TGG | 0.558456 | 7_2:+66679834 | Msa1070490:CDS |
| TGAATATCAAGATTCTCTTG+TGG | 0.566345 | 7_2:+66681082 | Msa1070490:CDS |
| GCTTCAGTCTCAAGATCCAC+AGG | 0.567472 | 7_2:-66680796 | None:intergenic |
| AGCTTGTACATTAAATCTTG+AGG | 0.568041 | 7_2:+66680825 | Msa1070490:CDS |
| ATATTGAAATCCACAAGAAG+TGG | 0.569272 | 7_2:-66680865 | None:intergenic |
| AATGCTCCAAAAGTTGCAGA+TGG | 0.572535 | 7_2:+66679900 | Msa1070490:CDS |
| TAGTCTCACACTTCGTCCTG+TGG | 0.572847 | 7_2:+66680780 | Msa1070490:CDS |
| AATGGATCTTGGAGGTGGAT+CGG | 0.580364 | 7_2:+66679839 | Msa1070490:CDS |
| ATTAAGAAGCTTGTACTCAA+GGG | 0.588255 | 7_2:+66679936 | Msa1070490:CDS |
| TTTAGAGCAGGCAGAAAGTG+TGG | 0.588867 | 7_2:+66677700 | Msa1070490:CDS |
| ATTCTCTTGTGGAAGCTGCA+TGG | 0.602647 | 7_2:+66681093 | Msa1070490:CDS |
| TAATGCATACATCTTCAGCT+AGG | 0.603926 | 7_2:-66680619 | None:intergenic |
| AATTGGGAGTAAGAAATGGA+AGG | 0.610820 | 7_2:-66677138 | None:intergenic |
| GTGGGAGTAATGGATCTTGG+AGG | 0.612375 | 7_2:+66679831 | Msa1070490:CDS |
| CCATTGCAAGAGATTACAGC+GGG | 0.615493 | 7_2:+66681050 | Msa1070490:CDS |
| CAAATCCAGCTAAAATGCAA+GGG | 0.619736 | 7_2:-66680139 | None:intergenic |
| AAAACTGGCTCCAGAAGCAG+GGG | 0.621311 | 7_2:-66680456 | None:intergenic |
| AAATGGCATATGCAGTGTCA+AGG | 0.621886 | 7_2:+66679865 | Msa1070490:CDS |
| GTGCAATTCTGATAAGGACA+TGG | 0.628525 | 7_2:-66680524 | None:intergenic |
| ACCCGGTTTGAGTGCATACG+CGG | 0.634041 | 7_2:+66677640 | Msa1070490:CDS |
| TTGTACATTAAATCTTGAGG+AGG | 0.647392 | 7_2:+66680828 | Msa1070490:CDS |
| GCTTCTACAGCATTTCCTAG+AGG | 0.686619 | 7_2:-66681116 | None:intergenic |
| TCCATTGCAAGAGATTACAG+CGG | 0.727640 | 7_2:+66681049 | Msa1070490:CDS |
| TGACAGTTAACTATGCATTG+GGG | 0.729371 | 7_2:+66679781 | Msa1070490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGCATTTAAAAAAAATAA+TGG | + | chr7_2:66677395-66677414 | Msa1070490:intron | 10.0% |
| !! | AAATAACAAAATTAAACTTA+TGG | - | chr7_2:66678722-66678741 | None:intergenic | 10.0% |
| !!! | AGTTTTTTATTTTTAAAACT+CGG | - | chr7_2:66680320-66680339 | None:intergenic | 10.0% |
| !! | ATCATTAAATCAAAATAATT+TGG | - | chr7_2:66680682-66680701 | None:intergenic | 10.0% |
| !!! | ATTTAGGATATAAAGAAAAA+CGG | - | chr7_2:66678070-66678089 | None:intergenic | 15.0% |
| !! | ATTATAAACGAAAATTAGTT+AGG | - | chr7_2:66678096-66678115 | None:intergenic | 15.0% |
| !!! | ATAATTTTGCAATTACTTTT+TGG | + | chr7_2:66678145-66678164 | Msa1070490:intron | 15.0% |
| !! | ATCTAAATTTAAGAATGATT+AGG | + | chr7_2:66678204-66678223 | Msa1070490:intron | 15.0% |
| !! | TATTAATTCATGTAACTTAA+AGG | + | chr7_2:66678373-66678392 | Msa1070490:intron | 15.0% |
| !! | TGAATAATATGTTAGAAAAA+AGG | + | chr7_2:66678822-66678841 | Msa1070490:intron | 15.0% |
| !! | GAATAATATGTTAGAAAAAA+GGG | + | chr7_2:66678823-66678842 | Msa1070490:intron | 15.0% |
| !!! | TAAAATTGCAAATTTTCAAA+TGG | + | chr7_2:66679152-66679171 | Msa1070490:intron | 15.0% |
| !!! | AAAATTGCAAATTTTCAAAT+GGG | + | chr7_2:66679153-66679172 | Msa1070490:intron | 15.0% |
| !!! | TCATATAAGAATTTTATTTG+TGG | + | chr7_2:66679426-66679445 | Msa1070490:intron | 15.0% |
| !!! | TACAACAAATATTTTTAGAA+AGG | + | chr7_2:66679579-66679598 | Msa1070490:intron | 15.0% |
| !!! | ATATTTTTAGAAAGGAAAAA+TGG | + | chr7_2:66679587-66679606 | Msa1070490:intron | 15.0% |
| !!! | AAATGTCAAAAATTTCTTTT+TGG | + | chr7_2:66679641-66679660 | Msa1070490:intron | 15.0% |
| !! | TCTACTTATTACATATTTAA+CGG | - | chr7_2:66679725-66679744 | None:intergenic | 15.0% |
| !! | TAAAAATAGCGAAATTAAAA+AGG | - | chr7_2:66680366-66680385 | None:intergenic | 15.0% |
| !!! | ACAAATATTTTGTTTTTCAA+AGG | + | chr7_2:66680395-66680414 | Msa1070490:intron | 15.0% |
| !!! | CAAATATTTTGTTTTTCAAA+GGG | + | chr7_2:66680396-66680415 | Msa1070490:intron | 15.0% |
| !! | AATAAACAATGTAATTAGAA+TGG | - | chr7_2:66680724-66680743 | None:intergenic | 15.0% |
| !!! | CATTGTTTATTATTTTAGAT+TGG | + | chr7_2:66680733-66680752 | Msa1070490:intron | 15.0% |
| !!! | TTTATTATTTTAGATTGGTT+TGG | + | chr7_2:66680738-66680757 | Msa1070490:intron | 15.0% |
| !!! | TAGTTTAAAACAAATTACAA+AGG | - | chr7_2:66680976-66680995 | None:intergenic | 15.0% |
| !!! | CAATAATTGATTTTATTTGT+TGG | + | chr7_2:66681016-66681035 | Msa1070490:intron | 15.0% |
| !!! | TAAAATATTTGAATTTTCGT+AGG | + | chr7_2:66681332-66681351 | Msa1070490:three_prime_UTR | 15.0% |
| !!! | TTTTTCAATGTTTTAAGATA+AGG | + | chr7_2:66681377-66681396 | Msa1070490:three_prime_UTR | 15.0% |
| !!! | GATTTAAGTTTTGATCAAAA+TGG | - | chr7_2:66677274-66677293 | None:intergenic | 20.0% |
| !!! | TGATGTTGAGTTTTATAATA+AGG | + | chr7_2:66677310-66677329 | Msa1070490:intron | 20.0% |
| !! | AGTAAAACATAGTCTTTAAT+AGG | + | chr7_2:66677556-66677575 | Msa1070490:intron | 20.0% |
| !! | AAAATTAGTTAGGAACATTT+AGG | - | chr7_2:66678086-66678105 | None:intergenic | 20.0% |
| !!! | CAGTGTTAAATTTAAGTTTT+TGG | + | chr7_2:66678262-66678281 | Msa1070490:intron | 20.0% |
| !!! | TGTTAAATTTAAGTTTTTGG+TGG | + | chr7_2:66678265-66678284 | Msa1070490:intron | 20.0% |
| !! | AAGAAACATTATCATGATAT+CGG | - | chr7_2:66678589-66678608 | None:intergenic | 20.0% |
| !! | GGAAATTATATAGTAGTTAA+TGG | + | chr7_2:66678893-66678912 | Msa1070490:intron | 20.0% |
| !! | AAATATAGTCAAAGTAAGTT+AGG | + | chr7_2:66679128-66679147 | Msa1070490:intron | 20.0% |
| !! | AATTAAGCTTAATTAAAGCA+TGG | - | chr7_2:66679242-66679261 | None:intergenic | 20.0% |
| !! | AATTTAATTACCTTAGGTAA+GGG | + | chr7_2:66679271-66679290 | Msa1070490:intron | 20.0% |
| !! | AAAAAATTCACAAAAACAGT+GGG | + | chr7_2:66679813-66679832 | Msa1070490:CDS | 20.0% |
| !! | ATATTATATGAAGAACTAGT+GGG | - | chr7_2:66679998-66680017 | None:intergenic | 20.0% |
| !! | TATATTATATGAAGAACTAG+TGG | - | chr7_2:66679999-66680018 | None:intergenic | 20.0% |
| !! | TTAAGAGCTCTTAATATATT+AGG | - | chr7_2:66680039-66680058 | None:intergenic | 20.0% |
| !!! | CTTTTTGCATTTTTTAAAAC+TGG | - | chr7_2:66680474-66680493 | None:intergenic | 20.0% |
| !! | AACATTGAAAAACAAGTTAA+TGG | - | chr7_2:66681369-66681388 | None:intergenic | 20.0% |
| !!! | AGGAAATTGTTTCTTGTTTT+GGG | - | chr7_2:66677199-66677218 | None:intergenic | 25.0% |
| ! | TTTGATCAAAATGGTAAACA+TGG | - | chr7_2:66677265-66677284 | None:intergenic | 25.0% |
| ! | AACTTAAATCTTCTTCATGT+TGG | + | chr7_2:66677284-66677303 | Msa1070490:intron | 25.0% |
| ! | AAAGAATATGGTGAAGTTAA+AGG | - | chr7_2:66677610-66677629 | None:intergenic | 25.0% |
| ! | GAGAAAAATTCACTTTATGT+GGG | - | chr7_2:66677850-66677869 | None:intergenic | 25.0% |
| ! | AGAGAAAAATTCACTTTATG+TGG | - | chr7_2:66677851-66677870 | None:intergenic | 25.0% |
| ! | AATAGATTGATCAACGATAA+AGG | - | chr7_2:66677949-66677968 | None:intergenic | 25.0% |
| !! | TTAAAGCCAAATACCATTTT+TGG | - | chr7_2:66678400-66678419 | None:intergenic | 25.0% |
| !!! | AAAGTGATAAGAGAAGTATT+TGG | + | chr7_2:66678457-66678476 | Msa1070490:intron | 25.0% |
| !!! | AAGTGATAAGAGAAGTATTT+GGG | + | chr7_2:66678458-66678477 | Msa1070490:intron | 25.0% |
| !!! | AATTTGTTGAGTTAATGAAC+AGG | + | chr7_2:66678610-66678629 | Msa1070490:intron | 25.0% |
| ! | TTGTAACCAAATATTTATGC+AGG | + | chr7_2:66678636-66678655 | Msa1070490:intron | 25.0% |
| !! | TCAAAAACAGTTTCCTTTTA+TGG | + | chr7_2:66678947-66678966 | Msa1070490:intron | 25.0% |
| ! | AAGGGAATTATTACCATAAA+AGG | - | chr7_2:66678963-66678982 | None:intergenic | 25.0% |
| !! | ATGGTAATAATTCCCTTTTA+TGG | + | chr7_2:66678966-66678985 | Msa1070490:intron | 25.0% |
| ! | CTTACCTAAGGTAATTAAAT+TGG | - | chr7_2:66679272-66679291 | None:intergenic | 25.0% |
| ! | CAATTTAATTACCTTAGGTA+AGG | + | chr7_2:66679270-66679289 | Msa1070490:intron | 25.0% |
| !! | TTTGTTATGTCTGTTTGAAT+AGG | + | chr7_2:66679451-66679470 | Msa1070490:intron | 25.0% |
| ! | AGAAAGTCAAATCTTGAATA+GGG | - | chr7_2:66679492-66679511 | None:intergenic | 25.0% |
| ! | AAGAAAGTCAAATCTTGAAT+AGG | - | chr7_2:66679493-66679512 | None:intergenic | 25.0% |
| ! | TTGAAACTTGTCATCTTTAT+AGG | + | chr7_2:66679758-66679777 | Msa1070490:intron | 25.0% |
| ! | GAAAAAATTCACAAAAACAG+TGG | + | chr7_2:66679812-66679831 | Msa1070490:CDS | 25.0% |
| ! | AATATGATCTCTATGTTCAT+AGG | + | chr7_2:66679964-66679983 | Msa1070490:CDS | 25.0% |
| ! | TATAGTAGAATATGTTTGCA+TGG | + | chr7_2:66680885-66680904 | Msa1070490:CDS | 25.0% |
| !!! | AATTGATTTTATTTGTTGGC+AGG | + | chr7_2:66681020-66681039 | Msa1070490:intron | 25.0% |
| ! | AAATTTAGGTAACGATGATA+TGG | - | chr7_2:66681141-66681160 | None:intergenic | 25.0% |
| ! | TACATCAATCGTTCAAATTT+AGG | - | chr7_2:66681155-66681174 | None:intergenic | 25.0% |
| ! | TTGAGAATATTCATAGCTTA+TGG | + | chr7_2:66681303-66681322 | Msa1070490:three_prime_UTR | 25.0% |
| AAGAAATTGGGAGTAAGAAA+TGG | - | chr7_2:66677145-66677164 | None:intergenic | 30.0% | |
| ATTTCTTACTCCCAATTTCT+TGG | + | chr7_2:66677144-66677163 | Msa1070490:CDS | 30.0% | |
| !! | CATGTTGTTTCCAAGAAATT+GGG | - | chr7_2:66677157-66677176 | None:intergenic | 30.0% |
| !! | ACATGTTGTTTCCAAGAAAT+TGG | - | chr7_2:66677158-66677177 | None:intergenic | 30.0% |
| !!! | CTTGTTTTGGGAATATCTTA+CGG | - | chr7_2:66677187-66677206 | None:intergenic | 30.0% |
| !! | GAGGAAATTGTTTCTTGTTT+TGG | - | chr7_2:66677200-66677219 | None:intergenic | 30.0% |
| ! | AGGTGACAATAACATCTTTT+TGG | + | chr7_2:66677330-66677349 | Msa1070490:intron | 30.0% |
| CAAACAATTCTTCACTTCAA+TGG | + | chr7_2:66677459-66677478 | Msa1070490:intron | 30.0% | |
| GTGTAGTCTACAAAAGAATA+TGG | - | chr7_2:66677622-66677641 | None:intergenic | 30.0% | |
| ATTAGTCGAGGTTAAATGAT+GGG | - | chr7_2:66677820-66677839 | None:intergenic | 30.0% | |
| TATTAGTCGAGGTTAAATGA+TGG | - | chr7_2:66677821-66677840 | None:intergenic | 30.0% | |
| TTTCTCCATATGTAAGAGTT+AGG | + | chr7_2:66677882-66677901 | Msa1070490:intron | 30.0% | |
| CAATTCCTAACTCTTACATA+TGG | - | chr7_2:66677890-66677909 | None:intergenic | 30.0% | |
| ATCGTTGATCAATCTATTGT+TGG | + | chr7_2:66677951-66677970 | Msa1070490:intron | 30.0% | |
| TGCGAATTTATGCATCTATT+AGG | + | chr7_2:66678237-66678256 | Msa1070490:intron | 30.0% | |
| GTAACTTAAAGGACCAAAAA+TGG | + | chr7_2:66678384-66678403 | Msa1070490:intron | 30.0% | |
| AAAGGACCAAAAATGGTATT+TGG | + | chr7_2:66678391-66678410 | Msa1070490:intron | 30.0% | |
| ACATTAATAACCACCTACAA+TGG | + | chr7_2:66678427-66678446 | Msa1070490:intron | 30.0% | |
| TAATTTCCGTCGAAAATTTG+TGG | - | chr7_2:66678535-66678554 | None:intergenic | 30.0% | |
| !! | AAGTTTCCATTGCTATTTAG+CGG | - | chr7_2:66678562-66678581 | None:intergenic | 30.0% |
| ! | TTCTGAAAAGATACTGCAAT+CGG | + | chr7_2:66678693-66678712 | Msa1070490:intron | 30.0% |
| TCAACTGTGTCATGTATTAT+GGG | - | chr7_2:66678759-66678778 | None:intergenic | 30.0% | |
| ! | ATGCATTGACATGCATAATA+GGG | - | chr7_2:66678782-66678801 | None:intergenic | 30.0% |
| ! | TATGCATTGACATGCATAAT+AGG | - | chr7_2:66678783-66678802 | None:intergenic | 30.0% |
| ACTGATTAAGGATATGGAAA+AGG | + | chr7_2:66678872-66678891 | Msa1070490:intron | 30.0% | |
| TGGTTAAGCATACCATAAAA+GGG | - | chr7_2:66678981-66679000 | None:intergenic | 30.0% | |
| TAATGGTATCATTAGCTGTT+AGG | + | chr7_2:66679208-66679227 | Msa1070490:intron | 30.0% | |
| TGCTCCAATTTAATTACCTT+AGG | + | chr7_2:66679265-66679284 | Msa1070490:intron | 30.0% | |
| GATGCAGTTTCTATTATTGA+TGG | + | chr7_2:66679332-66679351 | Msa1070490:CDS | 30.0% | |
| AGTACAAGCTTCTTAATGTA+TGG | - | chr7_2:66679933-66679952 | None:intergenic | 30.0% | |
| ATTAAGAAGCTTGTACTCAA+GGG | + | chr7_2:66679936-66679955 | Msa1070490:CDS | 30.0% | |
| AAGTTGACTAAAACAACTCT+CGG | + | chr7_2:66680270-66680289 | Msa1070490:intron | 30.0% | |
| ATATGCTGGAGAAGAATTTA+AGG | + | chr7_2:66680427-66680446 | Msa1070490:CDS | 30.0% | |
| TGAGACTATAAGGTGTATTT+GGG | - | chr7_2:66680768-66680787 | None:intergenic | 30.0% | |
| AGCTTGTACATTAAATCTTG+AGG | + | chr7_2:66680825-66680844 | Msa1070490:CDS | 30.0% | |
| TTGTACATTAAATCTTGAGG+AGG | + | chr7_2:66680828-66680847 | Msa1070490:CDS | 30.0% | |
| !! | AAGAAGTGGATAAGTTGATT+TGG | - | chr7_2:66680854-66680873 | None:intergenic | 30.0% |
| ATATTGAAATCCACAAGAAG+TGG | - | chr7_2:66680868-66680887 | None:intergenic | 30.0% | |
| TGAATATCAAGATTCTCTTG+TGG | + | chr7_2:66681082-66681101 | Msa1070490:CDS | 30.0% | |
| CATAAACAAAACAAGCTCAA+TGG | - | chr7_2:66681270-66681289 | None:intergenic | 30.0% | |
| AATTGGGAGTAAGAAATGGA+AGG | - | chr7_2:66677141-66677160 | None:intergenic | 35.0% | |
| ATCAAACACAACAGCATAAG+AGG | - | chr7_2:66677219-66677238 | None:intergenic | 35.0% | |
| CAAAATGGTAAACATGGACA+CGG | - | chr7_2:66677259-66677278 | None:intergenic | 35.0% | |
| ! | ATTCTTTTGTAGACTACACC+CGG | + | chr7_2:66677623-66677642 | Msa1070490:intron | 35.0% |
| ! | AAAGATTTTGCAGCTTCTTC+TGG | - | chr7_2:66677671-66677690 | None:intergenic | 35.0% |
| !!! | TTTGATTCCACTTTTAGAGC+AGG | + | chr7_2:66677688-66677707 | Msa1070490:CDS | 35.0% |
| AAAACTTACCCCAAGTCTAA+CGG | - | chr7_2:66677753-66677772 | None:intergenic | 35.0% | |
| TTAGTCGAGGTTAAATGATG+GGG | - | chr7_2:66677819-66677838 | None:intergenic | 35.0% | |
| GTGGGTAAAAATATTAGTCG+AGG | - | chr7_2:66677832-66677851 | None:intergenic | 35.0% | |
| !!! | GTCTCTACTTTTTTTGTCCA+CGG | - | chr7_2:66678016-66678035 | None:intergenic | 35.0% |
| TTTGATCAATCCATTGTAGG+TGG | - | chr7_2:66678440-66678459 | None:intergenic | 35.0% | |
| CACTTTGATCAATCCATTGT+AGG | - | chr7_2:66678443-66678462 | None:intergenic | 35.0% | |
| AATTTGTGGAGTATGCAATG+TGG | - | chr7_2:66678521-66678540 | None:intergenic | 35.0% | |
| ! | CATACTCCACAAATTTTCGA+CGG | + | chr7_2:66678526-66678545 | Msa1070490:intron | 35.0% |
| CTGTTGCCTGCATAAATATT+TGG | - | chr7_2:66678645-66678664 | None:intergenic | 35.0% | |
| !! | CAGGTTTAAGGCTTTTGAAT+GGG | + | chr7_2:66678665-66678684 | Msa1070490:intron | 35.0% |
| !! | AGGTTTAAGGCTTTTGAATG+GGG | + | chr7_2:66678666-66678685 | Msa1070490:intron | 35.0% |
| GTCAACTGTGTCATGTATTA+TGG | - | chr7_2:66678760-66678779 | None:intergenic | 35.0% | |
| CTGGTTAAGCATACCATAAA+AGG | - | chr7_2:66678982-66679001 | None:intergenic | 35.0% | |
| TTCAAATGGGTCATCTATTG+TGG | + | chr7_2:66679166-66679185 | Msa1070490:intron | 35.0% | |
| TCAAATGGGTCATCTATTGT+GGG | + | chr7_2:66679167-66679186 | Msa1070490:intron | 35.0% | |
| TCATTAGCTGTTAGGTCTAT+AGG | + | chr7_2:66679216-66679235 | Msa1070490:intron | 35.0% | |
| ATTATTGATGGAACCCAAGA+AGG | + | chr7_2:66679344-66679363 | Msa1070490:CDS | 35.0% | |
| CGTACACATACACACATATA+TGG | + | chr7_2:66679554-66679573 | Msa1070490:intron | 35.0% | |
| GTGACAGTTAACTATGCATT+GGG | + | chr7_2:66679780-66679799 | Msa1070490:CDS | 35.0% | |
| TGACAGTTAACTATGCATTG+GGG | + | chr7_2:66679781-66679800 | Msa1070490:CDS | 35.0% | |
| TAACTATGCATTGGGGAAAT+TGG | + | chr7_2:66679788-66679807 | Msa1070490:CDS | 35.0% | |
| AACTATGCATTGGGGAAATT+GGG | + | chr7_2:66679789-66679808 | Msa1070490:CDS | 35.0% | |
| CATTAAGAAGCTTGTACTCA+AGG | + | chr7_2:66679935-66679954 | Msa1070490:CDS | 35.0% | |
| TCTTCCAGTTACTTACACTT+TGG | + | chr7_2:66680065-66680084 | Msa1070490:intron | 35.0% | |
| TCTACCAAAGTGTAAGTAAC+TGG | - | chr7_2:66680072-66680091 | None:intergenic | 35.0% | |
| CAAATCCAGCTAAAATGCAA+GGG | - | chr7_2:66680142-66680161 | None:intergenic | 35.0% | |
| TCAAATCCAGCTAAAATGCA+AGG | - | chr7_2:66680143-66680162 | None:intergenic | 35.0% | |
| !!! | TGCATTTTAGCTGGATTTGA+TGG | + | chr7_2:66680143-66680162 | Msa1070490:CDS | 35.0% |
| ATGCAAAAAGATAGTTCGTC+AGG | + | chr7_2:66680484-66680503 | Msa1070490:CDS | 35.0% | |
| ! | CCAAAAGTGCAATTCTGATA+AGG | - | chr7_2:66680533-66680552 | None:intergenic | 35.0% |
| ! | CCTTATCAGAATTGCACTTT+TGG | + | chr7_2:66680530-66680549 | Msa1070490:CDS | 35.0% |
| ! | TATCAGAATTGCACTTTTGG+TGG | + | chr7_2:66680533-66680552 | Msa1070490:CDS | 35.0% |
| ! | ATTGCACTTTTGGTGGAATT+TGG | + | chr7_2:66680540-66680559 | Msa1070490:CDS | 35.0% |
| TAATGCATACATCTTCAGCT+AGG | - | chr7_2:66680622-66680641 | None:intergenic | 35.0% | |
| GTGAGACTATAAGGTGTATT+TGG | - | chr7_2:66680769-66680788 | None:intergenic | 35.0% | |
| ATCAACTTATCCACTTCTTG+TGG | + | chr7_2:66680855-66680874 | Msa1070490:CDS | 35.0% | |
| TATGCTGTTGTGTTTGATGC+TGG | + | chr7_2:66677221-66677240 | Msa1070490:intron | 40.0% | |
| AAACTTACCCCAAGTCTAAC+GGG | - | chr7_2:66677752-66677771 | None:intergenic | 40.0% | |
| ! | CCACGGTTCAATCTTTTACA+AGG | - | chr7_2:66677999-66678018 | None:intergenic | 40.0% |
| CCTTGTAAAAGATTGAACCG+TGG | + | chr7_2:66677996-66678015 | Msa1070490:intron | 40.0% | |
| TAGTCACCGCTAAATAGCAA+TGG | + | chr7_2:66678553-66678572 | Msa1070490:intron | 40.0% | |
| ATATTTATGCAGGCAACAGC+AGG | + | chr7_2:66678646-66678665 | Msa1070490:intron | 40.0% | |
| !! | GCAGGTTTAAGGCTTTTGAA+TGG | + | chr7_2:66678664-66678683 | Msa1070490:intron | 40.0% |
| CTGTGTCATGTATTATGGGA+CGG | - | chr7_2:66678755-66678774 | None:intergenic | 40.0% | |
| !!! | TTTTTTAGGGTCCTGCTAAC+TGG | - | chr7_2:66679017-66679036 | None:intergenic | 40.0% |
| CGGAGAGAGTAGTTCAATAA+TGG | + | chr7_2:66679191-66679210 | Msa1070490:intron | 40.0% | |
| CTGAACAAATCCCTTACCTA+AGG | - | chr7_2:66679284-66679303 | None:intergenic | 40.0% | |
| CCAGAGATAAGAACCTTCTT+GGG | - | chr7_2:66679360-66679379 | None:intergenic | 40.0% | |
| CCAAGAAGGTTCTTATCTCT+GGG | + | chr7_2:66679358-66679377 | Msa1070490:CDS | 40.0% | |
| TGTGTATGTGTACGCATGTA+TGG | - | chr7_2:66679548-66679567 | None:intergenic | 40.0% | |
| GGTGACAGTTAACTATGCAT+TGG | + | chr7_2:66679779-66679798 | Msa1070490:intron | 40.0% | |
| ACTATGCATTGGGGAAATTG+GGG | + | chr7_2:66679790-66679809 | Msa1070490:CDS | 40.0% | |
| CACAAAAACAGTGGGAGTAA+TGG | + | chr7_2:66679821-66679840 | Msa1070490:CDS | 40.0% | |
| AAATGGCATATGCAGTGTCA+AGG | + | chr7_2:66679865-66679884 | Msa1070490:CDS | 40.0% | |
| AATGCTCCAAAAGTTGCAGA+TGG | + | chr7_2:66679900-66679919 | Msa1070490:CDS | 40.0% | |
| ! | TCTTCTCCATCTGCAACTTT+TGG | - | chr7_2:66679909-66679928 | None:intergenic | 40.0% |
| !! | ACTTTGGTAGAGAAGCATCT+CGG | + | chr7_2:66680081-66680100 | Msa1070490:CDS | 40.0% |
| AAAGGGACATACACATATGC+TGG | + | chr7_2:66680413-66680432 | Msa1070490:intron | 40.0% | |
| GTGCAATTCTGATAAGGACA+TGG | - | chr7_2:66680527-66680546 | None:intergenic | 40.0% | |
| ! | ACTTTTGGTGGAATTTGGAG+TGG | + | chr7_2:66680545-66680564 | Msa1070490:CDS | 40.0% |
| TCCATTGCAAGAGATTACAG+CGG | + | chr7_2:66681049-66681068 | Msa1070490:CDS | 40.0% | |
| !! | CTTTCTGCCTGCTCTAAAAG+TGG | - | chr7_2:66677698-66677717 | None:intergenic | 45.0% |
| ! | TTTAGAGCAGGCAGAAAGTG+TGG | + | chr7_2:66677700-66677719 | Msa1070490:CDS | 45.0% |
| CCACACAAGCATCTGTTTAG+CGG | + | chr7_2:66678481-66678500 | Msa1070490:intron | 45.0% | |
| CAAGCATCTGTTTAGCGGTT+TGG | + | chr7_2:66678486-66678505 | Msa1070490:intron | 45.0% | |
| GTCATGTATTATGGGACGGA+GGG | - | chr7_2:66678751-66678770 | None:intergenic | 45.0% | |
| TGTCATGTATTATGGGACGG+AGG | - | chr7_2:66678752-66678771 | None:intergenic | 45.0% | |
| ATATCCTTAATCAGTGCCCC+CGG | - | chr7_2:66678867-66678886 | None:intergenic | 45.0% | |
| GGTATGCTTAACCAGTGCTT+CGG | + | chr7_2:66678987-66679006 | Msa1070490:intron | 45.0% | |
| GTATGCTTAACCAGTGCTTC+GGG | + | chr7_2:66678988-66679007 | Msa1070490:intron | 45.0% | |
| TATGCTTAACCAGTGCTTCG+GGG | + | chr7_2:66678989-66679008 | Msa1070490:intron | 45.0% | |
| ATGGGTCATCTATTGTGGGA+CGG | + | chr7_2:66679171-66679190 | Msa1070490:intron | 45.0% | |
| TGCATCACGTTGAACGTTGA+AGG | - | chr7_2:66679318-66679337 | None:intergenic | 45.0% | |
| CCCAAGAAGGTTCTTATCTC+TGG | + | chr7_2:66679357-66679376 | Msa1070490:CDS | 45.0% | |
| CCCAGAGATAAGAACCTTCT+TGG | - | chr7_2:66679361-66679380 | None:intergenic | 45.0% | |
| TGTACGCATGTATGGATCGA+TGG | - | chr7_2:66679540-66679559 | None:intergenic | 45.0% | |
| !! | ACAGTGGGAGTAATGGATCT+TGG | + | chr7_2:66679828-66679847 | Msa1070490:CDS | 45.0% |
| AATGGATCTTGGAGGTGGAT+CGG | + | chr7_2:66679839-66679858 | Msa1070490:CDS | 45.0% | |
| !! | CTTTGGTAGAGAAGCATCTC+GGG | + | chr7_2:66680082-66680101 | Msa1070490:CDS | 45.0% |
| ! | ATCTCGGGCAGAGATTTTGA+AGG | + | chr7_2:66680097-66680116 | Msa1070490:CDS | 45.0% |
| CCAGCTAAAATGCAAGGGTT+AGG | - | chr7_2:66680137-66680156 | None:intergenic | 45.0% | |
| !! | CCTAACCCTTGCATTTTAGC+TGG | + | chr7_2:66680134-66680153 | Msa1070490:CDS | 45.0% |
| TCGGTATCTGACCTAACGAT+CGG | - | chr7_2:66680301-66680320 | None:intergenic | 45.0% | |
| ! | TAAAACTGGCTCCAGAAGCA+GGG | - | chr7_2:66680460-66680479 | None:intergenic | 45.0% |
| ! | TTAAAACTGGCTCCAGAAGC+AGG | - | chr7_2:66680461-66680480 | None:intergenic | 45.0% |
| ! | TTTGGTGGAATTTGGAGTGG+TGG | + | chr7_2:66680548-66680567 | Msa1070490:CDS | 45.0% |
| GGACGAAGTGTGAGACTATA+AGG | - | chr7_2:66680778-66680797 | None:intergenic | 45.0% | |
| !! | GTGTTGCTCGTTGATGGATT+TGG | + | chr7_2:66680925-66680944 | Msa1070490:CDS | 45.0% |
| CCATTGCAAGAGATTACAGC+GGG | + | chr7_2:66681050-66681069 | Msa1070490:CDS | 45.0% | |
| ATTCTCTTGTGGAAGCTGCA+TGG | + | chr7_2:66681093-66681112 | Msa1070490:CDS | 45.0% | |
| GCTTCTACAGCATTTCCTAG+AGG | - | chr7_2:66681119-66681138 | None:intergenic | 45.0% | |
| !!! | AATTTTCATAATTTTTTTTA+GGG | - | chr7_2:66679030-66679049 | None:intergenic | 5.0% |
| !!! | AAATTTTCATAATTTTTTTT+AGG | - | chr7_2:66679031-66679050 | None:intergenic | 5.0% |
| GTGTTTGATGCTGGTAGCAC+TGG | + | chr7_2:66677230-66677249 | Msa1070490:intron | 50.0% | |
| ATCCGCGTATGCACTCAAAC+CGG | - | chr7_2:66677645-66677664 | None:intergenic | 50.0% | |
| ! | CAAGTCTAACGGGTGTCTTG+GGG | - | chr7_2:66677742-66677761 | None:intergenic | 50.0% |
| ! | CCAAGTCTAACGGGTGTCTT+GGG | - | chr7_2:66677743-66677762 | None:intergenic | 50.0% |
| CCAAGACACCCGTTAGACTT+GGG | + | chr7_2:66677741-66677760 | Msa1070490:intron | 50.0% | |
| CAAGACACCCGTTAGACTTG+GGG | + | chr7_2:66677742-66677761 | Msa1070490:intron | 50.0% | |
| CCGCTAAACAGATGCTTGTG+TGG | - | chr7_2:66678484-66678503 | None:intergenic | 50.0% | |
| TGCAGGCAACAGCAGGTTTA+AGG | + | chr7_2:66678653-66678672 | Msa1070490:intron | 50.0% | |
| TATCCTTAATCAGTGCCCCC+GGG | - | chr7_2:66678866-66678885 | None:intergenic | 50.0% | |
| !! | GGGGGCACTGATTAAGGATA+TGG | + | chr7_2:66678866-66678885 | Msa1070490:intron | 50.0% |
| ATGCTTAACCAGTGCTTCGG+GGG | + | chr7_2:66678990-66679009 | Msa1070490:intron | 50.0% | |
| !! | GTGGGAGTAATGGATCTTGG+AGG | + | chr7_2:66679831-66679850 | Msa1070490:CDS | 50.0% |
| !! | GGAGTAATGGATCTTGGAGG+TGG | + | chr7_2:66679834-66679853 | Msa1070490:CDS | 50.0% |
| ! | TGGAGGTGGATCGGTTCAAA+TGG | + | chr7_2:66679848-66679867 | Msa1070490:CDS | 50.0% |
| TCTCGGTTTAGCCGATCGTT+AGG | + | chr7_2:66680287-66680306 | Msa1070490:intron | 50.0% | |
| ! | AAAACTGGCTCCAGAAGCAG+GGG | - | chr7_2:66680459-66680478 | None:intergenic | 50.0% |
| TAGTCTCACACTTCGTCCTG+TGG | + | chr7_2:66680780-66680799 | Msa1070490:CDS | 50.0% | |
| GCTTCAGTCTCAAGATCCAC+AGG | - | chr7_2:66680799-66680818 | None:intergenic | 50.0% | |
| ! | CAGTACGTGTTGCTCGTTGA+TGG | + | chr7_2:66680919-66680938 | Msa1070490:CDS | 50.0% |
| CCCGCTGTAATCTCTTGCAA+TGG | - | chr7_2:66681053-66681072 | None:intergenic | 50.0% | |
| ! | ACCCGGTTTGAGTGCATACG+CGG | + | chr7_2:66677640-66677659 | Msa1070490:CDS | 55.0% |
| TCCGCGTATGCACTCAAACC+GGG | - | chr7_2:66677644-66677663 | None:intergenic | 55.0% | |
| ! | GGCAGAAAGTGTGGTTCCTG+AGG | + | chr7_2:66677709-66677728 | Msa1070490:intron | 55.0% |
| CCCAAGACACCCGTTAGACT+TGG | + | chr7_2:66677740-66677759 | Msa1070490:intron | 55.0% | |
| ! | CCCAAGTCTAACGGGTGTCT+TGG | - | chr7_2:66677744-66677763 | None:intergenic | 55.0% |
| GAAATGCTAACCGATGCCCC+CGG | + | chr7_2:66678845-66678864 | Msa1070490:intron | 55.0% | |
| AAATGCTAACCGATGCCCCC+GGG | + | chr7_2:66678846-66678865 | Msa1070490:intron | 55.0% | |
| ATCCTTAATCAGTGCCCCCG+GGG | - | chr7_2:66678865-66678884 | None:intergenic | 55.0% | |
| ! | GGTGGAATTTGGAGTGGTGG+AGG | + | chr7_2:66680551-66680570 | Msa1070490:CDS | 55.0% |
| ! | GGAATTTGGAGTGGTGGAGG+AGG | + | chr7_2:66680554-66680573 | Msa1070490:CDS | 55.0% |
| ! | TAACGGGTGTCTTGGGGCGT+TGG | - | chr7_2:66677736-66677755 | None:intergenic | 60.0% |
| AATGCTAACCGATGCCCCCG+GGG | + | chr7_2:66678847-66678866 | Msa1070490:intron | 60.0% | |
| TCCTTAATCAGTGCCCCCGG+GGG | - | chr7_2:66678864-66678883 | None:intergenic | 60.0% | |
| TAACTGGTCCCCCGAAGCAC+TGG | - | chr7_2:66679001-66679020 | None:intergenic | 60.0% | |
| AAGGCCAATGCCCCTGCTTC+TGG | + | chr7_2:66680446-66680465 | Msa1070490:CDS | 60.0% | |
| ! | TGGAGTGGTGGAGGAGGAAG+TGG | + | chr7_2:66680560-66680579 | Msa1070490:CDS | 60.0% |
| GTGGAAGCTGCATGGCCTCT+AGG | + | chr7_2:66681101-66681120 | Msa1070490:CDS | 60.0% | |
| !! | GTCTTGGGGCGTTGGTCCTC+AGG | - | chr7_2:66677728-66677747 | None:intergenic | 65.0% |
| ATGCTAACCGATGCCCCCGG+GGG | + | chr7_2:66678848-66678867 | Msa1070490:intron | 65.0% | |
| GCTTCGGGGGACCAGTTAGC+AGG | + | chr7_2:66679003-66679022 | Msa1070490:intron | 65.0% | |
| ! | GGCTCCAGAAGCAGGGGCAT+TGG | - | chr7_2:66680453-66680472 | None:intergenic | 65.0% |
| ! | ATCAGTGCCCCCGGGGGCAT+CGG | - | chr7_2:66678858-66678877 | None:intergenic | 70.0% |
| !! | GCCCCCGGGGGCACTGATTA+AGG | + | chr7_2:66678860-66678879 | Msa1070490:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 66677135 | 66681429 | 66677135 | ID=Msa1070490;Name=Msa1070490 |
| chr7_2 | mRNA | 66677135 | 66681429 | 66677135 | ID=Msa1070490-mRNA-1;Parent=Msa1070490;Name=Msa1070490-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.71|0.75|1|1|1|8|245|360 |
| chr7_2 | exon | 66677135 | 66677185 | 66677135 | ID=Msa1070490-mRNA-1:exon:14323;Parent=Msa1070490-mRNA-1 |
| chr7_2 | exon | 66677635 | 66677721 | 66677635 | ID=Msa1070490-mRNA-1:exon:14324;Parent=Msa1070490-mRNA-1 |
| chr7_2 | exon | 66679287 | 66679379 | 66679287 | ID=Msa1070490-mRNA-1:exon:14325;Parent=Msa1070490-mRNA-1 |
| chr7_2 | exon | 66679780 | 66679985 | 66679780 | ID=Msa1070490-mRNA-1:exon:14326;Parent=Msa1070490-mRNA-1 |
| chr7_2 | exon | 66680073 | 66680164 | 66680073 | ID=Msa1070490-mRNA-1:exon:14327;Parent=Msa1070490-mRNA-1 |
| chr7_2 | exon | 66680417 | 66680631 | 66680417 | ID=Msa1070490-mRNA-1:exon:14328;Parent=Msa1070490-mRNA-1 |
| chr7_2 | exon | 66680751 | 66680946 | 66680751 | ID=Msa1070490-mRNA-1:exon:14329;Parent=Msa1070490-mRNA-1 |
| chr7_2 | exon | 66681042 | 66681429 | 66681042 | ID=Msa1070490-mRNA-1:exon:14330;Parent=Msa1070490-mRNA-1 |
| chr7_2 | CDS | 66677135 | 66677185 | 66677135 | ID=Msa1070490-mRNA-1:cds;Parent=Msa1070490-mRNA-1 |
| chr7_2 | CDS | 66677635 | 66677721 | 66677635 | ID=Msa1070490-mRNA-1:cds;Parent=Msa1070490-mRNA-1 |
| chr7_2 | CDS | 66679287 | 66679379 | 66679287 | ID=Msa1070490-mRNA-1:cds;Parent=Msa1070490-mRNA-1 |
| chr7_2 | CDS | 66679780 | 66679985 | 66679780 | ID=Msa1070490-mRNA-1:cds;Parent=Msa1070490-mRNA-1 |
| chr7_2 | CDS | 66680073 | 66680164 | 66680073 | ID=Msa1070490-mRNA-1:cds;Parent=Msa1070490-mRNA-1 |
| chr7_2 | CDS | 66680417 | 66680631 | 66680417 | ID=Msa1070490-mRNA-1:cds;Parent=Msa1070490-mRNA-1 |
| chr7_2 | CDS | 66680751 | 66680946 | 66680751 | ID=Msa1070490-mRNA-1:cds;Parent=Msa1070490-mRNA-1 |
| chr7_2 | CDS | 66681042 | 66681184 | 66681042 | ID=Msa1070490-mRNA-1:cds;Parent=Msa1070490-mRNA-1 |
| chr7_2 | three_prime_UTR | 66681185 | 66681429 | 66681185 | ID=Msa1070490-mRNA-1:three_prime_utr;Parent=Msa1070490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
