AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1101620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1101620 MtrunA17_Chr7g0243681 86.089 496 64 1 1 496 1 491 0.0 888
Msa1101620 MtrunA17_Chr7g0243631 83.800 500 79 1 1 498 1 500 0.0 865
Msa1101620 MtrunA17_Chr7g0243951 76.353 499 115 3 1 498 1 497 0.0 791
Msa1101620 MtrunA17_Chr4g0060511 75.896 502 116 3 1 498 1 501 0.0 788
Msa1101620 MtrunA17_Chr7g0243771 74.743 487 117 3 8 493 3 484 0.0 766
Msa1101620 MtrunA17_Chr7g0243861 75.301 498 121 2 2 498 5 501 0.0 761
Msa1101620 MtrunA17_Chr7g0243931 72.946 499 133 2 1 498 7 504 0.0 761
Msa1101620 MtrunA17_Chr7g0243801 73.279 494 122 4 1 493 1 485 0.0 758
Msa1101620 MtrunA17_Chr7g0235051 76.104 498 88 2 1 498 1 467 0.0 753
Msa1101620 MtrunA17_Chr7g0243761 74.900 498 95 2 1 498 1 468 0.0 728
Msa1101620 MtrunA17_Chr7g0243851 67.134 499 120 3 1 498 1 456 0.0 680
Msa1101620 MtrunA17_Chr7g0243871 66.937 493 151 4 1 493 1 481 0.0 677
Msa1101620 MtrunA17_Chr7g0243781 66.194 494 156 3 1 493 1 484 0.0 661
Msa1101620 MtrunA17_Chr5g0401851 52.041 490 231 2 5 492 4 491 0.0 532
Msa1101620 MtrunA17_Chr7g0243811 62.162 407 141 2 23 429 1 394 5.00e-180 510
Msa1101620 MtrunA17_Chr7g0243611 76.527 311 58 2 126 436 1 296 3.03e-177 499
Msa1101620 MtrunA17_Chr8g0355221 50.410 488 238 3 5 491 9 493 7.00e-175 501
Msa1101620 MtrunA17_Chr1g0165701 50.407 492 239 4 5 496 9 495 2.00e-174 500
Msa1101620 MtrunA17_Chr5g0416741 49.695 491 244 2 8 498 10 497 4.25e-169 486
Msa1101620 MtrunA17_Chr6g0463891 49.385 488 242 5 10 495 11 495 8.72e-164 473
Msa1101620 MtrunA17_Chr5g0416821 48.589 496 233 5 5 494 4 483 8.29e-159 460
Msa1101620 MtrunA17_Chr7g0243711 79.528 254 51 1 245 498 78 330 2.23e-145 420
Msa1101620 MtrunA17_Chr7g0243711 88.608 79 9 0 1 79 1 79 7.56e-42 152
Msa1101620 MtrunA17_Chr4g0044511 43.685 483 257 8 7 486 36 506 1.60e-133 396
Msa1101620 MtrunA17_Chr8g0366391 44.040 495 254 11 1 487 1 480 8.11e-129 384
Msa1101620 MtrunA17_Chr4g0066221 41.992 512 255 13 1 493 1 489 8.89e-127 378
Msa1101620 MtrunA17_Chr4g0044501 43.927 494 254 11 1 487 1 478 3.23e-126 377
Msa1101620 MtrunA17_Chr4g0066151 42.105 494 250 11 10 491 17 486 5.17e-122 366
Msa1101620 MtrunA17_Chr4g0066261 41.142 508 266 12 1 493 1 490 6.13e-122 366
Msa1101620 MtrunA17_Chr4g0066131 41.532 496 254 10 10 493 12 483 9.42e-119 357
Msa1101620 MtrunA17_Chr4g0066201 42.742 496 241 15 10 492 17 482 1.39e-118 357
Msa1101620 MtrunA17_Chr4g0014061 39.506 486 280 5 10 493 8 481 2.10e-118 357
Msa1101620 MtrunA17_Chr4g0044521 42.324 482 258 7 8 487 6 469 3.05e-118 356
Msa1101620 MtrunA17_Chr5g0419771 41.988 493 269 11 6 488 31 516 4.09e-118 357
Msa1101620 MtrunA17_Chr8g0374971 40.937 491 271 7 10 493 11 489 5.29e-116 351
Msa1101620 MtrunA17_Chr8g0374901 41.548 491 266 8 10 493 11 487 3.29e-115 348
Msa1101620 MtrunA17_Chr4g0066281 41.548 491 254 11 10 493 11 475 3.50e-115 348
Msa1101620 MtrunA17_Chr1g0179901 38.067 507 285 11 1 491 7 500 1.07e-113 345
Msa1101620 MtrunA17_Chr7g0275681 39.706 476 278 5 11 484 12 480 6.86e-113 342
Msa1101620 MtrunA17_Chr8g0350881 41.212 495 264 9 10 493 11 489 1.91e-112 342
Msa1101620 MtrunA17_Chr7g0265151 39.919 496 273 14 1 484 1 483 3.69e-112 341
Msa1101620 MtrunA17_Chr4g0066171 40.000 500 250 14 10 493 20 485 1.23e-110 337
Msa1101620 MtrunA17_Chr4g0011051 37.721 509 284 12 9 501 7 498 2.98e-109 333
Msa1101620 MtrunA17_Chr7g0265041 40.443 497 274 12 1 484 1 488 7.04e-109 333
Msa1101620 MtrunA17_Chr6g0463861 39.600 500 267 12 1 488 1 477 2.87e-107 328
Msa1101620 MtrunA17_Chr7g0243921 72.300 213 54 1 2 214 31 238 2.99e-107 319
Msa1101620 MtrunA17_Chr2g0294931 39.844 512 267 13 1 493 1 490 1.70e-106 327
Msa1101620 MtrunA17_Chr7g0265141 39.344 488 275 10 8 483 6 484 3.05e-106 325
Msa1101620 MtrunA17_Chr8g0374931 38.943 511 269 13 1 491 1 488 2.03e-105 323
Msa1101620 MtrunA17_Chr7g0243911 75.743 202 48 1 268 469 15 215 2.75e-105 313
Msa1101620 MtrunA17_Chr5g0419761 39.388 490 283 9 10 489 8 493 1.06e-104 322
Msa1101620 MtrunA17_Chr8g0374941 41.870 492 261 9 10 491 948 1424 1.70e-104 341
Msa1101620 MtrunA17_Chr8g0374941 40.833 480 259 9 1 470 1 465 2.65e-99 327
Msa1101620 MtrunA17_Chr8g0374941 41.053 475 257 8 1 466 466 926 3.16e-96 318
Msa1101620 MtrunA17_Chr6g0463851 39.173 508 261 13 1 485 1 483 2.29e-104 321
Msa1101620 MtrunA17_Chr5g0410941 38.235 510 270 13 1 491 13 496 4.61e-102 315
Msa1101620 MtrunA17_Chr7g0265111 38.160 511 299 9 3 503 31 534 4.96e-102 316
Msa1101620 MtrunA17_Chr7g0218311 39.087 504 261 12 10 493 15 492 1.51e-101 313
Msa1101620 MtrunA17_Chr2g0294921 38.477 512 270 13 1 491 150 637 8.60e-101 316
Msa1101620 MtrunA17_Chr5g0428081 37.451 510 276 13 1 491 1 486 1.97e-97 303
Msa1101620 MtrunA17_Chr7g0265051 36.456 491 296 11 9 491 7 489 4.18e-97 302
Msa1101620 MtrunA17_Chr4g0044481 41.849 411 196 7 11 414 27 401 5.38e-97 300
Msa1101620 MtrunA17_Chr7g0265101 35.644 505 287 12 9 493 7 493 1.04e-96 301
Msa1101620 MtrunA17_Chr7g0231631 48.763 283 128 3 216 498 8 273 6.56e-81 253
Msa1101620 MtrunA17_Chr2g0294941 38.544 371 187 13 119 469 15 364 4.38e-71 231
Msa1101620 MtrunA17_Chr7g0243721 76.429 140 33 0 186 325 1 140 1.06e-67 214
Msa1101620 MtrunA17_Chr5g0440421 28.627 510 321 11 3 487 2 493 3.74e-60 206
Msa1101620 MtrunA17_Chr8g0361411 31.493 489 289 13 9 488 6 457 5.49e-60 204
Msa1101620 MtrunA17_Chr5g0414331 30.832 493 290 17 1 484 3 453 1.01e-57 198
Msa1101620 MtrunA17_Chr6g0464881 27.968 497 312 13 1 489 1 459 1.93e-56 195
Msa1101620 MtrunA17_Chr5g0414321 30.321 498 296 17 1 489 1 456 2.38e-56 194
Msa1101620 MtrunA17_Chr6g0464861 27.600 500 299 16 1 484 1 453 3.28e-56 194
Msa1101620 MtrunA17_Chr6g0454261 29.249 506 305 14 11 492 10 486 1.29e-55 193
Msa1101620 MtrunA17_Chr6g0454191 28.210 514 302 14 3 484 2 480 1.65e-55 193
Msa1101620 MtrunA17_Chr6g0464871 29.435 496 296 17 1 484 13 466 2.47e-55 192
Msa1101620 MtrunA17_Chr7g0250001 29.800 500 273 19 8 484 3 447 3.41e-55 191
Msa1101620 MtrunA17_Chr2g0329111 28.834 489 282 16 12 470 7 459 4.11e-55 192
Msa1101620 MtrunA17_Chr6g0464841 28.313 498 299 17 1 484 1 454 7.87e-55 190
Msa1101620 MtrunA17_Chr7g0249931 27.846 492 299 14 6 484 35 483 1.31e-54 191
Msa1101620 MtrunA17_Chr3g0098111 28.081 495 315 13 6 486 4 471 1.33e-54 190
Msa1101620 MtrunA17_Chr6g0454401 28.180 511 306 13 3 484 2 480 1.45e-54 190
Msa1101620 MtrunA17_Chr7g0231651 48.500 200 98 2 5 199 4 203 4.79e-54 181
Msa1101620 MtrunA17_Chr8g0377921 30.470 489 290 17 12 482 5 461 1.35e-53 187
Msa1101620 MtrunA17_Chr3g0078841 28.283 495 307 13 11 484 10 477 1.49e-53 187
Msa1101620 MtrunA17_Chr6g0454331 26.945 527 287 15 6 484 2 478 7.61e-53 186
Msa1101620 MtrunA17_Chr2g0278711 29.459 499 302 14 11 488 11 480 8.80e-53 186
Msa1101620 MtrunA17_Chr7g0217881 30.661 499 274 20 11 484 10 461 8.88e-53 185
Msa1101620 MtrunA17_Chr6g0464921 28.916 498 297 16 1 484 1 455 9.70e-53 185
Msa1101620 MtrunA17_Chr3g0118711 29.572 514 298 18 1 484 1 480 1.05e-52 185
Msa1101620 MtrunA17_Chr2g0307961 31.697 489 286 19 11 484 13 468 1.30e-52 185
Msa1101620 MtrunA17_Chr6g0454341 28.346 508 290 19 11 484 10 477 2.39e-52 184
Msa1101620 MtrunA17_Chr7g0232391 30.279 502 274 20 10 480 5 461 3.36e-52 184
Msa1101620 MtrunA17_Chr6g0454291 28.850 513 293 16 6 484 2 476 4.17e-52 184
Msa1101620 MtrunA17_Chr7g0232411 29.077 509 285 19 10 487 5 468 4.49e-52 183
Msa1101620 MtrunA17_Chr3g0118671 29.317 498 302 17 9 484 4 473 1.49e-51 182
Msa1101620 MtrunA17_Chr6g0453951 27.856 499 306 14 11 484 57 526 2.10e-51 183
Msa1101620 MtrunA17_Chr4g0050341 29.307 505 295 18 11 485 19 491 5.60e-51 181
Msa1101620 MtrunA17_Chr8g0336331 27.218 496 310 12 11 484 10 476 7.25e-51 180
Msa1101620 MtrunA17_Chr3g0112771 29.688 512 287 17 1 492 1 459 7.93e-51 180
Msa1101620 MtrunA17_Chr8g0359821 28.112 498 304 11 11 484 10 477 9.65e-51 180
Msa1101620 MtrunA17_Chr1g0207971 26.465 495 316 15 6 490 3 459 9.74e-51 179
Msa1101620 MtrunA17_Chr5g0426431 30.159 504 294 18 6 484 7 477 9.78e-51 180
Msa1101620 MtrunA17_Chr6g0454141 27.092 502 306 15 11 484 10 479 1.09e-50 180
Msa1101620 MtrunA17_Chr5g0420801 27.362 508 295 17 6 487 2 461 1.21e-50 179
Msa1101620 MtrunA17_Chr7g0249981 28.974 497 295 18 1 484 15 466 1.92e-50 179
Msa1101620 MtrunA17_Chr3g0118691 29.249 506 288 18 11 484 15 482 2.25e-50 179
Msa1101620 MtrunA17_Chr3g0121991 28.088 502 308 18 11 489 79 550 2.88e-50 180
Msa1101620 MtrunA17_Chr6g0454321 29.006 493 296 18 11 479 10 472 3.09e-50 182
Msa1101620 MtrunA17_Chr6g0454361 28.457 499 303 14 11 484 11 480 3.81e-50 178
Msa1101620 MtrunA17_Chr6g0454181 27.075 506 301 15 11 484 10 479 5.62e-50 178
Msa1101620 MtrunA17_Chr8g0380531 28.717 491 306 12 4 485 3 458 7.69e-50 177
Msa1101620 MtrunA17_Chr3g0092641 30.876 502 293 20 6 484 7 477 8.78e-50 177
Msa1101620 MtrunA17_Chr6g0454301 27.968 497 306 15 11 484 263 730 1.90e-49 181
Msa1101620 MtrunA17_Chr6g0454301 33.740 246 135 6 243 483 6 228 8.51e-34 135
Msa1101620 MtrunA17_Chr6g0454201 27.976 504 299 12 11 484 11 480 2.74e-49 176
Msa1101620 MtrunA17_Chr3g0118701 28.963 511 283 20 11 484 15 482 4.56e-49 176
Msa1101620 MtrunA17_Chr6g0462551 29.039 489 280 13 21 482 14 462 1.04e-48 174
Msa1101620 MtrunA17_Chr3g0122001 28.169 497 304 16 11 484 486 952 1.34e-48 180
Msa1101620 MtrunA17_Chr3g0122001 27.545 501 309 16 11 487 6 476 9.85e-47 174
Msa1101620 MtrunA17_Chr6g0459311 29.675 492 285 14 12 480 14 467 1.63e-48 174
Msa1101620 MtrunA17_Chr3g0112761 29.577 497 278 16 11 487 8 452 1.83e-48 173
Msa1101620 MtrunA17_Chr7g0218831 29.461 482 278 16 11 481 6 436 1.84e-48 173
Msa1101620 MtrunA17_Chr6g0454151 27.833 503 299 15 11 484 10 477 4.17e-48 173
Msa1101620 MtrunA17_Chr8g0361371 28.261 506 299 15 1 481 1 467 4.28e-48 173
Msa1101620 MtrunA17_Chr6g0486251 28.974 497 290 15 8 480 3 460 4.53e-48 172
Msa1101620 MtrunA17_Chr6g0486201 28.974 497 290 15 8 480 3 460 4.53e-48 172
Msa1101620 MtrunA17_Chr1g0161351 27.921 505 316 16 1 488 28 501 4.54e-48 173
Msa1101620 MtrunA17_Chr1g0207981 27.419 496 320 14 2 484 4 472 5.23e-48 172
Msa1101620 MtrunA17_Chr7g0218821 29.472 492 279 17 11 482 5 448 1.48e-47 171
Msa1101620 MtrunA17_Chr6g0454131 26.939 490 321 11 11 484 10 478 2.14e-47 171
Msa1101620 MtrunA17_Chr8g0369341 27.519 516 294 15 6 487 2 471 2.74e-47 171
Msa1101620 MtrunA17_Chr3g0118771 28.088 502 299 15 11 484 21 488 3.95e-47 171
Msa1101620 MtrunA17_Chr8g0377941 27.930 512 284 16 6 484 2 461 7.14e-47 169
Msa1101620 MtrunA17_Chr7g0218841 28.838 482 282 17 11 481 6 437 5.27e-46 166
Msa1101620 MtrunA17_Chr5g0423981 27.615 478 299 13 11 484 10 444 6.18e-46 166
Msa1101620 MtrunA17_Chr1g0159551 29.142 501 261 18 6 473 9 448 6.88e-46 166
Msa1101620 MtrunA17_Chr5g0448521 27.435 503 296 16 9 482 3 465 7.65e-46 166
Msa1101620 MtrunA17_Chr6g0454271 33.333 297 176 6 191 484 9 286 7.67e-46 162
Msa1101620 MtrunA17_Chr8g0357361 45.320 203 104 5 211 413 57 252 8.96e-46 161
Msa1101620 MtrunA17_Chr6g0453961 26.104 498 317 12 11 484 19 489 1.12e-45 166
Msa1101620 MtrunA17_Chr3g0079731 27.470 506 296 18 12 481 7 477 1.53e-45 166
Msa1101620 MtrunA17_Chr7g0218811 27.423 485 287 15 11 482 15 447 1.93e-45 165
Msa1101620 MtrunA17_Chr8g0370941 28.571 511 284 17 11 477 8 481 2.05e-45 166
Msa1101620 MtrunA17_Chr8g0347281 28.169 497 282 15 12 480 19 468 2.12e-45 166
Msa1101620 MtrunA17_Chr6g0454121 27.255 499 308 14 11 484 10 478 3.66e-45 165
Msa1101620 MtrunA17_Chr6g0454211 27.132 516 304 15 3 484 289 766 5.14e-45 169
Msa1101620 MtrunA17_Chr1g0207931 25.709 494 273 14 5 485 86 498 6.53e-45 165
Msa1101620 MtrunA17_Chr1g0173121 29.218 486 283 17 6 473 9 451 7.17e-45 164
Msa1101620 MtrunA17_Chr7g0232341 35.172 290 146 9 217 489 207 471 7.34e-45 164
Msa1101620 MtrunA17_Chr7g0232331 36.237 287 143 9 217 487 207 469 8.72e-45 164
Msa1101620 MtrunA17_Chr6g0449931 35.135 333 158 10 186 487 165 470 9.28e-45 164
Msa1101620 MtrunA17_Chr7g0275511 28.889 495 287 16 12 480 16 471 1.03e-44 164
Msa1101620 MtrunA17_Chr6g0452771 26.969 508 299 16 11 484 10 479 1.46e-44 163
Msa1101620 MtrunA17_Chr6g0454351 28.039 510 274 19 11 484 12 464 1.99e-44 162
Msa1101620 MtrunA17_Chr8g0339451 37.413 286 134 9 215 480 199 459 3.09e-44 162
Msa1101620 MtrunA17_Chr8g0335161 28.112 498 289 18 11 480 6 462 5.27e-44 161
Msa1101620 MtrunA17_Chr8g0334831 27.944 501 298 14 12 481 7 475 5.46e-44 162
Msa1101620 MtrunA17_Chr1g0207951 26.735 490 308 15 10 484 655 1108 6.99e-44 166
Msa1101620 MtrunA17_Chr1g0207951 25.880 483 317 14 10 485 123 571 1.57e-42 162
Msa1101620 MtrunA17_Chr6g0462521 34.084 311 161 8 187 480 166 449 8.14e-44 160
Msa1101620 MtrunA17_Chr1g0207831 26.506 498 304 18 10 485 7 464 8.87e-44 161
Msa1101620 MtrunA17_Chr4g0053501 28.313 498 309 16 1 484 1 464 1.83e-43 160
Msa1101620 MtrunA17_Chr8g0335141 36.749 283 143 7 217 487 213 471 2.07e-43 160
Msa1101620 MtrunA17_Chr1g0207861 27.092 502 311 18 6 486 3 470 2.46e-43 160
Msa1101620 MtrunA17_Chr4g0066141 47.337 169 88 1 325 493 193 360 2.99e-43 157
Msa1101620 MtrunA17_Chr4g0066141 36.683 199 104 5 39 234 8 187 5.63e-28 114
Msa1101620 MtrunA17_Chr8g0382021 27.812 489 288 18 16 481 39 485 3.40e-43 159
Msa1101620 MtrunA17_Chr5g0442521 26.572 493 315 14 12 482 6 473 7.36e-43 158
Msa1101620 MtrunA17_Chr8g0339631 33.837 331 162 10 188 487 167 471 1.12e-42 158
Msa1101620 MtrunA17_Chr8g0339601 34.713 314 158 9 180 471 29 317 1.50e-42 154
Msa1101620 MtrunA17_Chr5g0393591 25.000 516 290 16 11 506 17 455 1.96e-42 157
Msa1101620 MtrunA17_Chr8g0347271 28.921 491 286 16 12 480 20 469 2.48e-42 157
Msa1101620 MtrunA17_Chr6g0462571 27.218 496 295 15 12 482 5 459 2.75e-42 157
Msa1101620 MtrunA17_Chr5g0442491 27.833 503 295 17 12 482 6 472 3.65e-42 156
Msa1101620 MtrunA17_Chr8g0334851 33.934 333 167 11 180 489 172 474 4.84e-42 156
Msa1101620 MtrunA17_Chr5g0412101 26.877 506 316 17 1 486 1 472 5.25e-42 156
Msa1101620 MtrunA17_Chr7g0232311 33.227 313 169 7 183 481 174 460 5.62e-42 155
Msa1101620 MtrunA17_Chr7g0243731 83.750 80 13 0 340 419 1 80 5.93e-42 144
Msa1101620 MtrunA17_Chr3g0118661 27.689 502 298 17 11 483 13 478 6.07e-42 156
Msa1101620 MtrunA17_Chr8g0365811 25.948 501 330 15 1 486 485 959 7.03e-42 160
Msa1101620 MtrunA17_Chr8g0365811 25.373 469 293 15 6 448 4 441 5.84e-37 145
Msa1101620 MtrunA17_Chr5g0412131 27.888 502 294 19 11 486 12 471 8.27e-42 155
Msa1101620 MtrunA17_Chr8g0336691 28.235 510 291 19 10 488 12 477 8.34e-42 160
Msa1101620 MtrunA17_Chr8g0336691 36.177 293 145 9 205 480 1108 1375 1.09e-41 160
Msa1101620 MtrunA17_Chr8g0336691 36.101 277 131 10 217 488 681 916 7.67e-36 142
Msa1101620 MtrunA17_Chr5g0412111 26.761 497 305 16 11 486 5 463 1.08e-41 155
Msa1101620 MtrunA17_Chr6g0462531 27.218 496 297 18 12 480 5 463 1.10e-41 155
Msa1101620 MtrunA17_Chr7g0218791 27.329 483 300 15 11 483 5 446 1.23e-41 154
Msa1101620 MtrunA17_Chr4g0053321 26.908 498 318 14 21 503 36 502 1.32e-41 155
Msa1101620 MtrunA17_Chr8g0336651 36.242 298 142 9 204 480 969 1239 1.96e-41 159
Msa1101620 MtrunA17_Chr8g0336651 34.892 278 129 6 217 488 547 778 2.05e-39 153
Msa1101620 MtrunA17_Chr8g0336651 34.589 292 151 8 204 480 194 460 2.93e-37 146
Msa1101620 MtrunA17_Chr8g0373301 35.889 287 138 8 217 486 211 468 2.13e-41 154
Msa1101620 MtrunA17_Chr7g0232401 36.140 285 142 7 217 486 210 469 2.73e-41 154
Msa1101620 MtrunA17_Chr8g0339461 36.071 280 132 9 215 473 207 460 3.48e-41 154
Msa1101620 MtrunA17_Chr5g0442541 27.510 498 296 18 11 482 5 463 3.99e-41 154
Msa1101620 MtrunA17_Chr6g0454221 37.190 242 133 5 243 483 6 229 1.04e-40 148
Msa1101620 MtrunA17_Chr5g0431441 28.067 481 292 17 11 477 18 458 1.52e-40 152
Msa1101620 MtrunA17_Chr5g0442581 27.621 496 307 17 12 482 6 474 1.64e-40 153
Msa1101620 MtrunA17_Chr5g0431361 26.946 501 300 14 3 486 4 455 2.80e-40 151
Msa1101620 MtrunA17_Chr1g0153451 35.612 278 140 9 217 480 207 459 5.87e-40 150
Msa1101620 MtrunA17_Chr5g0403641 34.043 282 150 8 217 480 235 498 1.98e-39 150
Msa1101620 MtrunA17_Chr1g0153461 37.445 227 117 4 273 487 2 215 7.95e-39 140
Msa1101620 MtrunA17_Chr8g0339441 40.909 220 102 5 275 479 218 424 8.19e-39 146
Msa1101620 MtrunA17_Chr6g0462541 33.688 282 151 6 210 482 207 461 8.93e-39 147
Msa1101620 MtrunA17_Chr7g0249961 37.500 232 122 6 253 484 51 259 2.65e-38 141
Msa1101620 MtrunA17_Chr5g0442561 24.089 494 325 13 11 482 5 470 6.20e-38 145
Msa1101620 MtrunA17_Chr2g0278721 28.059 474 285 18 4 460 8 442 6.28e-38 148
Msa1101620 MtrunA17_Chr2g0278721 24.370 476 297 18 10 460 516 953 2.26e-26 113
Msa1101620 MtrunA17_Chr2g0302961 26.761 497 311 17 8 484 2 465 6.41e-38 144
Msa1101620 MtrunA17_Chr3g0118751 26.148 501 281 15 11 484 6 444 7.23e-38 144
Msa1101620 MtrunA17_Chr5g0442601 27.856 499 302 21 12 482 405 873 1.04e-37 147
Msa1101620 MtrunA17_Chr5g0442601 30.592 304 163 10 121 410 64 333 8.70e-27 114
Msa1101620 MtrunA17_Chr3g0118721 34.202 307 163 12 191 484 9 289 1.90e-37 139
Msa1101620 MtrunA17_Chr8g0336741 35.106 282 137 9 217 480 214 467 2.86e-37 143
Msa1101620 MtrunA17_Chr8g0336731 32.508 323 162 11 188 481 192 487 4.51e-37 143
Msa1101620 MtrunA17_Chr5g0426401 32.534 292 174 7 176 463 16 288 5.62e-37 139
Msa1101620 MtrunA17_Chr6g0454251 27.119 413 242 16 11 388 7 395 1.07e-36 140
Msa1101620 MtrunA17_Chr8g0334861 34.397 282 143 8 217 481 204 460 1.79e-36 140
Msa1101620 MtrunA17_Chr4g0032331 28.033 478 273 20 1 459 1 426 2.66e-36 140
Msa1101620 MtrunA17_Chr5g0431421 25.826 484 314 13 8 486 7 450 4.43e-36 139
Msa1101620 MtrunA17_Chr7g0241801 26.984 504 255 17 9 497 7 412 9.38e-36 138
Msa1101620 MtrunA17_Chr5g0442511 31.757 296 171 10 204 485 216 494 1.87e-35 138
Msa1101620 MtrunA17_Chr5g0401721 26.815 496 312 17 9 484 6 470 3.84e-35 137
Msa1101620 MtrunA17_Chr2g0278741 26.611 481 289 17 1 460 87 524 6.98e-35 137
Msa1101620 MtrunA17_Chr5g0432731 30.000 290 169 6 204 487 38 299 1.07e-34 132
Msa1101620 MtrunA17_Chr4g0042931 27.745 501 305 17 6 486 2 465 1.28e-34 135
Msa1101620 MtrunA17_Chr5g0431401 25.413 484 316 14 8 486 7 450 1.48e-34 135
Msa1101620 MtrunA17_Chr2g0302991 26.600 500 305 17 8 484 2 462 3.19e-34 134
Msa1101620 MtrunA17_Chr4g0069611 26.638 473 276 15 10 460 14 437 8.62e-34 133
Msa1101620 MtrunA17_Chr5g0431371 25.773 485 307 15 11 486 10 450 1.14e-33 132
Msa1101620 MtrunA17_Chr6g0454171 28.671 286 167 6 202 484 58 309 1.34e-33 129
Msa1101620 MtrunA17_Chr5g0448551 27.924 419 247 18 12 410 8 391 2.59e-33 131
Msa1101620 MtrunA17_Chr8g0355011 26.133 375 205 7 121 484 48 361 3.85e-33 129
Msa1101620 MtrunA17_Chr4g0072761 26.747 501 282 19 7 481 11 452 1.15e-32 129
Msa1101620 MtrunA17_Chr6g0464091 28.298 470 279 20 10 460 17 447 1.79e-32 129
Msa1101620 MtrunA17_Chr4g0072771 27.146 501 286 19 9 486 23 467 1.89e-32 129
Msa1101620 MtrunA17_Chr7g0241781 25.855 468 268 14 9 461 7 410 3.84e-32 128
Msa1101620 MtrunA17_Chr3g0106231 26.316 475 294 19 11 477 18 444 5.49e-32 128
Msa1101620 MtrunA17_Chr5g0409591 25.245 408 242 12 118 479 92 482 6.36e-32 128
Msa1101620 MtrunA17_Chr5g0429681 25.572 481 320 17 12 482 45 497 1.05e-31 127
Msa1101620 MtrunA17_Chr3g0079711 36.923 195 97 4 301 481 3 185 3.73e-31 119
Msa1101620 MtrunA17_Chr5g0429711 25.519 482 318 16 12 484 12 461 4.00e-31 125
Msa1101620 MtrunA17_Chr6g0482061 26.640 503 300 20 1 471 1 466 1.31e-30 124
Msa1101620 MtrunA17_Chr1g0196851 25.948 501 302 16 8 487 46 498 8.80e-30 122
Msa1101620 MtrunA17_Chr4g0042891 30.241 291 169 8 207 486 200 467 1.55e-29 121
Msa1101620 MtrunA17_Chr2g0302851 26.923 468 281 17 10 460 15 438 2.07e-29 120
Msa1101620 MtrunA17_Chr6g0454371 34.574 188 105 4 297 484 1 170 2.51e-29 113
Msa1101620 MtrunA17_Chr3g0106251 30.337 267 155 8 214 477 48 286 5.37e-29 116
Msa1101620 MtrunA17_Chr8g0336251 25.751 466 305 15 6 458 2 439 1.06e-28 118
Msa1101620 MtrunA17_Chr8g0336321 25.751 466 305 15 6 458 2 439 1.07e-28 118
Msa1101620 MtrunA17_Chr6g0466831 25.054 463 296 18 10 460 17 440 2.16e-28 117
Msa1101620 MtrunA17_Chr6g0466841 25.270 463 295 17 10 460 17 440 5.28e-28 116
Msa1101620 MtrunA17_Chr4g0029131 24.158 505 325 14 7 497 8 468 3.35e-27 115
Msa1101620 MtrunA17_Chr4g0029151 24.736 473 285 13 7 455 16 441 5.30e-27 113
Msa1101620 MtrunA17_Chr7g0232351 39.130 184 87 6 217 387 207 378 1.45e-26 111
Msa1101620 MtrunA17_Chr4g0039881 25.934 455 278 17 21 459 2 413 1.77e-26 111
Msa1101620 MtrunA17_Chr8g0367221 27.470 415 251 15 10 402 797 1183 7.89e-26 112
Msa1101620 MtrunA17_Chr8g0367221 26.794 418 249 17 10 402 11 396 2.10e-21 98.6
Msa1101620 MtrunA17_Chr8g0367221 31.132 212 127 7 277 486 1548 1742 3.19e-18 88.6
Msa1101620 MtrunA17_Chr4g0040691 25.376 465 302 14 6 459 3 433 9.42e-26 110
Msa1101620 MtrunA17_Chr6g0454231 29.779 272 127 9 217 484 7 218 3.88e-25 108
Msa1101620 MtrunA17_Chr7g0250021 27.374 358 196 11 6 339 7 324 1.17e-24 104
Msa1101620 MtrunA17_Chr8g0337381 40.000 140 71 3 348 487 2 128 6.30e-24 97.4
Msa1101620 MtrunA17_Chr3g0092031 33.152 184 108 5 277 460 6 174 6.51e-24 99.4
Msa1101620 MtrunA17_Chr8g0336261 35.714 154 82 2 297 450 1 137 1.91e-23 95.9
Msa1101620 MtrunA17_Chr4g0040711 23.602 483 288 16 6 459 3 433 2.31e-23 102
Msa1101620 MtrunA17_Chr2g0283041 22.811 491 326 16 8 484 4 455 3.88e-22 99.0
Msa1101620 MtrunA17_Chr1g0207881 36.029 136 74 3 352 485 261 385 6.97e-22 97.8
Msa1101620 MtrunA17_Chr2g0319731 24.421 475 304 15 1 459 15 450 1.46e-21 97.4
Msa1101620 MtrunA17_Chr2g0319801 25.370 473 294 16 5 459 2 433 2.26e-21 96.7
Msa1101620 MtrunA17_Chr5g0427571 34.054 185 107 5 275 458 103 273 3.06e-21 94.4
Msa1101620 MtrunA17_Chr5g0431431 28.448 232 130 5 209 439 147 343 6.76e-21 94.4
Msa1101620 MtrunA17_Chr2g0319751 24.512 461 303 14 10 459 484 910 2.20e-20 95.1
Msa1101620 MtrunA17_Chr2g0319751 21.937 506 330 13 10 506 7 456 1.18e-16 83.6
Msa1101620 MtrunA17_Chr2g0319761 24.439 446 289 13 10 443 7 416 5.72e-20 92.4
Msa1101620 MtrunA17_Chr2g0319791 24.249 466 298 17 10 459 7 433 9.78e-20 92.0
Msa1101620 MtrunA17_Chr4g0066231 46.250 80 38 2 386 463 1 77 7.74e-16 72.4
Msa1101620 MtrunA17_Chr6g0453981 31.788 151 89 4 179 321 60 204 9.16e-15 73.9
Msa1101620 MtrunA17_Chr7g0272701 33.333 123 79 2 105 224 30 152 5.80e-14 69.7
Msa1101620 MtrunA17_Chr6g0453941 30.065 153 94 3 177 321 110 257 1.05e-13 71.6
Msa1101620 MtrunA17_Chr6g0477011 24.601 313 202 8 10 312 15 303 4.91e-13 70.1
Msa1101620 MtrunA17_Chr6g0454391 37.931 87 40 2 359 445 8 80 7.39e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1101620 AT2G15490.3 40.771 493 269 10 6 488 2 481 6.52e-124 371
Msa1101620 AT2G15490.1 40.524 496 269 10 6 488 2 484 1.34e-123 370
Msa1101620 AT2G36770.1 39.798 495 289 6 2 491 5 495 5.57e-123 369
Msa1101620 AT4G34131.1 41.988 493 264 11 3 486 2 481 9.23e-123 368
Msa1101620 AT2G15480.2 39.721 501 279 11 3 488 2 494 4.91e-121 364
Msa1101620 AT2G15480.1 38.990 495 281 9 3 488 2 484 2.05e-120 362
Msa1101620 AT2G36780.1 39.192 495 292 6 2 491 5 495 7.06e-120 361
Msa1101620 AT2G36800.1 39.506 486 280 8 10 487 11 490 5.05e-119 359
Msa1101620 AT4G34135.1 42.222 495 265 10 1 486 1 483 7.75e-118 355
Msa1101620 AT2G36750.1 39.220 487 286 7 10 491 9 490 1.49e-117 355
Msa1101620 AT2G36760.1 38.367 490 289 7 10 492 13 496 6.46e-115 348
Msa1101620 AT2G36790.1 39.095 486 287 6 10 490 12 493 1.33e-114 348
Msa1101620 AT4G34138.1 38.508 496 275 12 8 491 8 485 1.59e-108 332
Msa1101620 AT3G53150.1 36.706 504 295 9 1 484 10 509 1.05e-100 312
Msa1101620 AT3G53160.1 36.066 488 295 10 6 484 3 482 2.22e-98 306
Msa1101620 AT4G34135.2 39.697 330 188 5 1 322 1 327 3.45e-74 238
Msa1101620 AT2G16890.2 33.002 503 264 18 11 484 9 467 1.36e-66 223
Msa1101620 AT5G14860.1 33.656 517 268 21 1 484 1 475 1.05e-65 221
Msa1101620 AT1G10400.1 31.881 505 268 17 9 484 5 462 1.24e-62 212
Msa1101620 AT1G22400.1 30.518 521 299 16 1 491 1 488 2.82e-61 209
Msa1101620 AT2G16890.3 33.042 457 235 16 11 439 9 422 2.92e-60 204
Msa1101620 AT1G73880.1 29.400 500 312 14 2 491 5 473 1.94e-58 201
Msa1101620 AT1G22380.1 29.325 474 293 12 11 465 13 463 1.47e-57 199
Msa1101620 AT5G03490.1 29.424 486 295 15 11 487 19 465 8.12e-56 194
Msa1101620 AT1G22340.1 29.865 519 291 20 1 484 1 481 2.33e-53 187
Msa1101620 AT4G15480.1 27.510 498 319 15 1 484 9 478 4.38e-52 184
Msa1101620 AT4G15490.1 27.105 487 314 15 11 484 8 466 7.92e-52 183
Msa1101620 AT2G43820.1 28.513 491 295 14 7 486 3 448 5.41e-51 180
Msa1101620 AT1G05675.1 28.807 486 289 14 11 481 6 449 6.07e-51 180
Msa1101620 AT1G22360.1 28.429 503 315 16 1 484 1 477 7.36e-51 181
Msa1101620 AT1G78270.1 28.628 503 305 16 6 484 8 480 1.33e-50 180
Msa1101620 AT1G51210.1 28.480 467 264 15 11 460 20 433 2.48e-50 178
Msa1101620 AT4G01070.1 29.183 514 280 18 11 489 8 472 3.00e-50 179
Msa1101620 AT1G05680.1 28.306 484 294 13 11 481 6 449 4.38e-50 178
Msa1101620 AT1G06000.1 31.493 489 255 20 11 484 10 433 5.62e-50 177
Msa1101620 AT1G01420.2 30.118 508 278 19 1 477 1 462 8.69e-50 178
Msa1101620 AT5G12890.1 26.233 507 320 13 3 483 2 480 1.92e-49 177
Msa1101620 AT1G01420.1 30.339 501 272 19 8 477 5 459 3.54e-49 176
Msa1101620 AT2G43840.2 28.571 490 286 17 11 485 7 447 3.52e-48 172
Msa1101620 AT4G14090.1 29.412 493 287 18 6 483 8 454 3.66e-48 173
Msa1101620 AT2G31750.1 28.862 492 287 17 11 484 8 454 3.73e-48 173
Msa1101620 AT2G43840.1 28.571 490 286 17 11 485 7 447 4.74e-48 172
Msa1101620 AT2G31750.2 28.310 491 291 16 11 484 8 454 6.35e-48 173
Msa1101620 AT1G22360.2 28.935 432 278 13 1 414 1 421 7.80e-48 172
Msa1101620 AT3G11340.1 28.571 490 284 16 12 487 10 447 2.39e-47 170
Msa1101620 AT1G22370.2 29.439 428 267 14 6 414 8 419 1.08e-46 169
Msa1101620 AT5G05860.1 28.425 489 285 17 4 477 2 440 2.58e-46 167
Msa1101620 AT2G31790.1 28.601 486 292 16 11 481 8 453 3.86e-46 167
Msa1101620 AT1G24100.1 27.551 490 297 15 11 484 11 458 4.81e-46 167
Msa1101620 AT5G05870.1 28.283 495 298 17 5 484 2 454 8.46e-46 167
Msa1101620 AT3G02100.1 26.969 508 296 18 3 486 5 461 8.55e-46 167
Msa1101620 AT3G21760.1 27.151 523 290 19 9 484 2 480 8.63e-46 167
Msa1101620 AT4G15500.1 26.200 500 319 19 11 495 9 473 2.67e-45 166
Msa1101620 AT5G26310.1 28.932 515 273 21 11 485 7 468 8.52e-45 164
Msa1101620 AT3G50740.1 28.681 523 274 23 11 487 7 476 1.18e-44 164
Msa1101620 AT4G36770.1 29.293 495 266 18 9 470 2 445 8.01e-44 161
Msa1101620 AT4G15550.1 28.600 507 281 21 11 483 13 472 1.66e-43 160
Msa1101620 AT2G30140.1 26.122 490 289 13 11 481 13 448 6.03e-43 159
Msa1101620 AT2G28080.1 28.776 490 293 15 15 486 22 473 6.53e-43 159
Msa1101620 AT3G21560.1 26.283 487 320 16 11 484 12 472 1.24e-42 159
Msa1101620 AT5G66690.1 28.824 510 280 20 11 485 7 468 2.47e-42 157
Msa1101620 AT2G36970.1 26.511 513 319 16 1 491 1 477 2.95e-42 157
Msa1101620 AT3G21790.1 26.499 517 299 18 9 484 2 478 3.14e-42 157
Msa1101620 AT2G23260.1 27.812 489 297 19 9 484 8 453 3.59e-42 156
Msa1101620 AT3G16520.3 31.930 285 163 6 203 481 197 456 6.16e-42 156
Msa1101620 AT2G30150.2 27.255 499 285 18 11 487 13 455 7.66e-42 155
Msa1101620 AT2G30140.2 26.122 490 288 14 11 481 13 447 1.08e-41 155
Msa1101620 AT5G59590.1 26.844 488 314 13 1 484 1 449 1.99e-41 154
Msa1101620 AT2G29740.1 27.799 518 296 23 1 484 1 474 2.17e-41 155
Msa1101620 AT3G46670.1 27.126 494 292 18 11 487 9 451 2.25e-41 154
Msa1101620 AT4G15260.1 30.556 324 184 8 172 484 61 354 3.44e-41 151
Msa1101620 AT5G05880.1 27.345 501 295 16 5 487 2 451 8.09e-41 152
Msa1101620 AT3G46680.1 26.598 485 297 20 11 482 9 447 1.03e-40 152
Msa1101620 AT2G30150.1 27.071 495 283 18 15 487 1 439 1.15e-40 152
Msa1101620 AT2G23250.1 27.254 477 285 17 21 484 8 435 1.22e-40 152
Msa1101620 AT3G46660.1 26.008 496 295 17 12 487 15 458 1.84e-40 152
Msa1101620 AT3G55700.1 27.733 494 292 15 11 487 8 453 3.77e-40 151
Msa1101620 AT1G07260.1 26.810 511 296 22 9 484 4 471 3.89e-40 151
Msa1101620 AT3G16520.2 31.868 273 155 6 203 469 197 444 7.86e-40 150
Msa1101620 AT3G16520.1 31.868 273 155 6 203 469 197 444 7.90e-40 150
Msa1101620 AT3G21800.1 25.577 520 298 20 8 484 2 475 9.98e-40 150
Msa1101620 AT2G18570.1 24.752 505 302 18 8 479 2 461 1.58e-39 149
Msa1101620 AT5G59580.1 26.294 483 305 15 11 485 9 448 2.14e-39 149
Msa1101620 AT1G07250.1 27.545 501 306 20 9 484 4 472 4.08e-39 149
Msa1101620 AT1G05530.1 26.572 493 304 15 9 484 3 454 5.95e-39 147
Msa1101620 AT3G46700.1 25.767 489 299 15 11 486 9 446 5.89e-38 145
Msa1101620 AT3G46650.1 26.458 480 276 17 11 477 10 425 6.57e-38 144
Msa1101620 AT4G15280.2 25.856 526 302 18 1 484 26 505 1.84e-37 144
Msa1101620 AT1G01390.1 29.307 505 281 19 8 481 5 464 2.54e-37 144
Msa1101620 AT1G01390.2 29.459 499 272 19 8 473 22 473 3.74e-37 143
Msa1101620 AT2G29730.1 25.911 494 320 17 10 488 4 466 5.32e-37 142
Msa1101620 AT4G15280.1 26.062 518 295 18 9 484 2 473 5.44e-37 142
Msa1101620 AT5G05890.1 26.326 509 294 16 5 487 2 455 6.58e-37 142
Msa1101620 AT5G05900.1 27.054 499 282 20 8 482 5 445 3.03e-36 140
Msa1101620 AT3G55710.1 27.912 498 296 16 11 490 8 460 1.49e-35 138
Msa1101620 AT3G46690.1 25.462 487 308 10 11 486 9 451 2.64e-35 137
Msa1101620 AT2G26480.1 26.166 493 288 16 9 481 6 442 9.98e-35 135
Msa1101620 AT5G38010.1 26.000 500 307 16 1 484 1 453 1.61e-34 135
Msa1101620 AT3G21780.1 24.803 508 309 18 9 484 2 468 3.26e-34 135
Msa1101620 AT1G05560.1 27.364 497 288 22 11 484 5 451 4.80e-34 134
Msa1101620 AT1G05560.2 27.364 497 288 22 11 484 55 501 7.89e-34 134
Msa1101620 AT1G22370.1 31.004 229 149 4 191 414 25 249 9.21e-34 130
Msa1101620 AT3G21750.1 29.429 333 180 9 172 484 171 468 3.77e-33 132
Msa1101620 AT2G16890.4 32.121 330 166 13 11 312 9 308 1.59e-32 127
Msa1101620 AT2G16890.1 32.121 330 166 13 11 312 9 308 1.59e-32 127
Msa1101620 AT3G46720.1 26.061 495 286 17 11 486 9 442 2.13e-32 129
Msa1101620 AT2G18560.1 31.163 215 127 4 275 479 168 371 2.27e-32 128
Msa1101620 AT2G15490.2 31.579 190 120 3 6 186 2 190 2.58e-32 125
Msa1101620 AT2G15490.2 32.061 131 73 4 363 488 151 270 2.43e-11 64.7
Msa1101620 AT2G29710.1 32.231 242 145 7 243 484 240 462 3.14e-31 126
Msa1101620 AT5G65550.1 27.885 416 247 16 9 402 7 391 5.27e-31 125
Msa1101620 AT2G29750.1 24.704 506 309 20 11 484 8 473 9.83e-31 125
Msa1101620 AT5G38040.1 25.000 476 299 14 21 484 20 449 1.67e-30 124
Msa1101620 AT5G49690.1 25.397 504 298 18 10 492 9 455 2.83e-30 123
Msa1101620 AT1G07240.1 30.996 271 161 8 210 473 213 464 9.23e-30 122
Msa1101620 AT5G17050.1 34.762 210 116 5 275 484 268 456 2.36e-28 117
Msa1101620 AT5G17030.1 33.175 211 118 5 275 484 267 455 3.24e-27 114
Msa1101620 AT5G17040.2 29.630 270 156 8 218 484 99 337 4.94e-27 112
Msa1101620 AT5G17040.1 30.000 270 155 8 218 484 201 439 1.93e-26 112
Msa1101620 AT3G22250.1 24.254 503 259 19 12 463 9 440 1.00e-25 110
Msa1101620 AT1G30530.1 26.400 375 226 11 121 484 115 450 1.78e-25 109
Msa1101620 AT4G27570.1 25.463 432 276 14 9 429 5 401 4.98e-25 108
Msa1101620 AT2G22590.1 24.882 422 256 11 8 402 12 399 1.37e-24 107
Msa1101620 AT3G29630.2 25.103 486 295 15 8 491 3 421 2.34e-24 105
Msa1101620 AT4G27560.1 25.277 451 279 16 9 440 5 416 1.54e-23 103
Msa1101620 AT3G29630.1 24.435 487 323 14 8 491 3 447 7.70e-23 101
Msa1101620 AT1G50580.1 25.527 427 246 14 8 412 3 379 6.27e-22 99.0
Msa1101620 AT1G64910.1 24.299 428 280 13 10 430 5 395 7.15e-22 98.6
Msa1101620 AT5G54010.1 24.094 469 291 15 8 465 3 417 8.04e-22 98.6
Msa1101620 AT5G37950.1 40.708 113 65 2 275 387 233 343 1.19e-19 90.9
Msa1101620 AT5G37950.2 40.708 113 65 2 275 387 227 337 1.19e-19 90.9
Msa1101620 AT5G54060.1 21.756 501 321 18 8 481 10 466 2.84e-19 90.9
Msa1101620 AT1G64920.1 23.265 490 318 18 8 487 3 444 1.48e-18 88.6
Msa1101620 AT5G53990.1 30.526 190 115 4 271 446 238 424 1.67e-17 85.5
Msa1101620 AT4G09500.1 23.620 453 274 15 9 446 4 399 3.38e-17 84.3
Msa1101620 AT2G22930.1 22.222 423 294 11 10 429 5 395 7.13e-16 80.5
Msa1101620 AT4G09500.2 23.312 459 293 16 9 446 4 424 7.66e-16 80.1

Find 93 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCACTGTCTATGGCTTTC+TGG 0.214144 7_3:-32422742 None:intergenic
TCCTCATTTCTTTGCTCTCT+TGG 0.225918 7_3:-32423924 None:intergenic
CTCCTCTGCAGCTTCCTAAT+TGG 0.244485 7_3:+32423146 Msa1101620:CDS
GGCACCACAGCTCTTTATAT+TGG 0.259277 7_3:+32423642 Msa1101620:CDS
TATCTGGGTTGTAAGGAAAA+AGG 0.268127 7_3:+32423534 Msa1101620:CDS
AAGAGGCAGACTGGTTAAAT+TGG 0.271096 7_3:+32423395 Msa1101620:CDS
GTCACAATCGCTCCTGTTGC+AGG 0.279867 7_3:-32423670 None:intergenic
AAGCCGTAAAAGTGAATTCT+TGG 0.280742 7_3:-32423007 None:intergenic
CTCTTTGTCCTTATCCAATT+AGG 0.291715 7_3:-32423160 None:intergenic
ATGTTACATGAAGTTGGTTA+TGG 0.297776 7_3:-32422604 None:intergenic
AGGGCTATATCATATGGAAT+TGG 0.320112 7_3:+32423620 Msa1101620:CDS
GCACATGGGCTTGAAAATTC+AGG 0.326438 7_3:+32423502 Msa1101620:CDS
TGAATTGAAGTCACTGTCTA+TGG 0.334767 7_3:-32422750 None:intergenic
AAGGATGAAAGAAAGCAAAA+AGG 0.338970 7_3:+32423600 Msa1101620:CDS
TCCTTTCCTCAAAATCTTGA+AGG 0.361084 7_3:-32423582 None:intergenic
TCCGTACTGTATGTAAGTTT+TGG 0.373417 7_3:+32423439 Msa1101620:CDS
TGTTACATGAAGTTGGTTAT+GGG 0.375904 7_3:-32422603 None:intergenic
ATGATGAAAAGAAGGGCAAT+AGG 0.395778 7_3:+32423350 Msa1101620:CDS
GTGAAGATGTAGTGGTGAAA+AGG 0.396895 7_3:+32423860 Msa1101620:CDS
ACCTTCCTCTATAGTCCTCT+TGG 0.417533 7_3:-32423974 None:intergenic
ATATTGGATCACCCTGCAAC+AGG 0.428727 7_3:+32423658 Msa1101620:CDS
TTGTTAGCCCATGATGAAAC+TGG 0.431380 7_3:-32423325 None:intergenic
TGAAGATGTAGTGGTGAAAA+GGG 0.442557 7_3:+32423861 Msa1101620:CDS
AATCTTGCAGTGTCAATCAT+AGG 0.443213 7_3:-32422659 None:intergenic
TGATGAAAAGAAGGGCAATA+GGG 0.443399 7_3:+32423351 Msa1101620:CDS
GGGCTATATCATATGGAATT+GGG 0.452750 7_3:+32423621 Msa1101620:CDS
GAGCAATAGAAAACAAGTTA+TGG 0.454124 7_3:+32423824 Msa1101620:CDS
ATAGACAGTGACTTCAATTC+AGG 0.455147 7_3:+32422752 Msa1101620:CDS
GGATTCATATGGCCAGGACT+TGG 0.458733 7_3:-32422638 None:intergenic
CATGGAGGAGCTTGCAAAAG+AGG 0.465102 7_3:+32423378 Msa1101620:CDS
AACATTGGCCATGTAATCAT+TGG 0.467524 7_3:-32423739 None:intergenic
ATGATTACATGGCCAATGTT+TGG 0.469197 7_3:+32423742 Msa1101620:CDS
TGCAGCTTCCTAATTGGATA+AGG 0.471991 7_3:+32423152 Msa1101620:CDS
CTAGCATGGGGATCAAATCT+TGG 0.472530 7_3:+32423293 Msa1101620:CDS
GAATAAATGTTACATGAAGT+TGG 0.479142 7_3:-32422610 None:intergenic
CTGGTTTGCCAATGATTACA+TGG 0.485323 7_3:+32423731 Msa1101620:CDS
GAAGCTTGTTCGGCGGTCCA+AGG 0.485454 7_3:-32422971 None:intergenic
AGGATGAGAGCGAAGAAACT+TGG 0.492214 7_3:+32423943 Msa1101620:CDS
ATTAGCATGTGTAGCTATGA+TGG 0.492761 7_3:-32422708 None:intergenic
ATCATAGGATTCATATGGCC+AGG 0.495465 7_3:-32422644 None:intergenic
TGTCAATCATAGGATTCATA+TGG 0.497162 7_3:-32422649 None:intergenic
ATATCTGTCACTATACAATC+AGG 0.500368 7_3:-32422941 None:intergenic
TAACAAGGATGATGAAAAGA+AGG 0.505140 7_3:+32423342 Msa1101620:CDS
GATCAAATCAGCTGCACAGT+TGG 0.506852 7_3:-32423041 None:intergenic
TCACTATACAATCAGGTTGA+AGG 0.508900 7_3:-32422934 None:intergenic
CAGTTCCCTTCAGCTCAAGT+TGG 0.509931 7_3:+32422800 Msa1101620:CDS
AAACTTGGTAACACTAGCAT+GGG 0.516760 7_3:+32423280 Msa1101620:CDS
GCTCAAGTTGGTCTCCCTGA+TGG 0.517552 7_3:+32422812 Msa1101620:CDS
GTGTAGGACCAGTTTCATCA+TGG 0.529814 7_3:+32423317 Msa1101620:CDS
ACTCTTGAAAGCATAAATGC+TGG 0.533717 7_3:+32423712 Msa1101620:CDS
GCCGAACAAGCTTCAAAACT+AGG 0.536885 7_3:+32422980 Msa1101620:CDS
GGGAGACCAACTTGAGCTGA+AGG 0.537026 7_3:-32422806 None:intergenic
AGCTTGCAAAAGAGGCAGAC+TGG 0.544212 7_3:+32423386 Msa1101620:CDS
TTTATTCCACATCCAAGTCC+TGG 0.545486 7_3:+32422626 Msa1101620:CDS
TGACAGATATGATGCAGCCT+TGG 0.553219 7_3:+32422954 Msa1101620:CDS
CAGCTTGTAGAAATTGCACA+TGG 0.554057 7_3:+32423487 Msa1101620:CDS
TAAAATTGATCACCAAACAT+TGG 0.555751 7_3:-32423754 None:intergenic
ATATGGCCAGGACTTGGATG+TGG 0.558704 7_3:-32422632 None:intergenic
CACTAGTAGTGAAGATGTAG+TGG 0.560380 7_3:+32423852 Msa1101620:CDS
GGGATCAAATCTTGGAGTGT+AGG 0.562776 7_3:+32423301 Msa1101620:CDS
AGTTTCATCATGGGCTAACA+AGG 0.564404 7_3:+32423327 Msa1101620:CDS
GCAAAGCCTCAATCGAATCT+CGG 0.567576 7_3:-32422904 None:intergenic
AAAACTTGGTAACACTAGCA+TGG 0.567971 7_3:+32423279 Msa1101620:CDS
GGAGTCATCTCAATTGTATG+AGG 0.575171 7_3:-32423127 None:intergenic
TTGAAGATAGCGGTCCCAGT+TGG 0.575570 7_3:+32423802 Msa1101620:CDS
TCCAAAACTTACATACAGTA+CGG 0.588823 7_3:-32423440 None:intergenic
GCAAGATTATTTGCTATGCA+TGG 0.591125 7_3:+32422674 Msa1101620:CDS
GCCAAGAGAGCAAAGAAATG+AGG 0.593451 7_3:+32423923 Msa1101620:CDS
TATGGCTTTCTGGAATGTTG+AGG 0.593695 7_3:-32422732 None:intergenic
TCAATTGTATGAGGAAAGCA+AGG 0.593831 7_3:-32423118 None:intergenic
GATGAAAAGAAGGGCAATAG+GGG 0.595633 7_3:+32423352 Msa1101620:CDS
CTCGGAGCATGTATGTTCCA+AGG 0.595823 7_3:-32422886 None:intergenic
CGATTGTGACTCACTGTGGT+TGG 0.596624 7_3:+32423683 Msa1101620:CDS
TCACAATCGCTCCTGTTGCA+GGG 0.607145 7_3:-32423669 None:intergenic
TGTAGGACCAGTTTCATCAT+GGG 0.610009 7_3:+32423318 Msa1101620:CDS
TGCTGCCAAGAGGACTATAG+AGG 0.613396 7_3:+32423969 Msa1101620:CDS
GGGCAATAGGGGACACATGG+AGG 0.614512 7_3:+32423363 Msa1101620:CDS
CATGCTCCGAGATTCGATTG+AGG 0.616793 7_3:+32422898 Msa1101620:CDS
TTGAAGAAATCTAAAGCACT+CGG 0.618950 7_3:+32424045 Msa1101620:CDS
TCAGAAACTAAATTATCTTG+AGG 0.621230 7_3:-32423076 None:intergenic
GGAGACCAACTTGAGCTGAA+GGG 0.621494 7_3:-32422805 None:intergenic
GAAGGGCAATAGGGGACACA+TGG 0.628087 7_3:+32423360 Msa1101620:CDS
GCCAAGAGGACTATAGAGGA+AGG 0.631460 7_3:+32423973 Msa1101620:CDS
AACAAGGATGATGAAAAGAA+GGG 0.642974 7_3:+32423343 Msa1101620:CDS
ATCCAATTAGGAAGCTGCAG+AGG 0.646580 7_3:-32423148 None:intergenic
AAGAGGACTATAGAGGAAGG+TGG 0.653780 7_3:+32423976 Msa1101620:CDS
GCTTCAAAATAGTCAGTGTG+AGG 0.660374 7_3:-32423184 None:intergenic
AACTTGGTGATGCTGCCAAG+AGG 0.668809 7_3:+32423959 Msa1101620:CDS
AGCTTGTAGAAATTGCACAT+GGG 0.669891 7_3:+32423488 Msa1101620:CDS
TGATCCAATATAAAGAGCTG+TGG 0.671290 7_3:-32423646 None:intergenic
GAAAAGGGAAGAGATAGCGA+AGG 0.701723 7_3:+32423876 Msa1101620:CDS
AACTTGGTAACACTAGCATG+GGG 0.721407 7_3:+32423281 Msa1101620:CDS
GGAGCGATTGTGACTCACTG+TGG 0.787881 7_3:+32423679 Msa1101620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGAAATACAACAAAAAAT+CGG + chr7_3:32422863-32422882 Msa1101620:CDS 15.0%
!!! TTTGAAATACAACAAAAAAT+CGG + chr7_3:32422863-32422882 Msa1101620:CDS 15.0%
!!! GAATAAGTTGAGTTTTAATA+GGG - chr7_3:32422781-32422800 None:intergenic 20.0%
!!! TGAATAAGTTGAGTTTTAAT+AGG - chr7_3:32422782-32422801 None:intergenic 20.0%
!!! GAATAAGTTGAGTTTTAATA+GGG - chr7_3:32422781-32422800 None:intergenic 20.0%
!!! TGAATAAGTTGAGTTTTAAT+AGG - chr7_3:32422782-32422801 None:intergenic 20.0%
! GAATAAATGTTACATGAAGT+TGG - chr7_3:32422613-32422632 None:intergenic 25.0%
!!! ATTCCAAGAATTCACTTTTA+CGG + chr7_3:32423004-32423023 Msa1101620:CDS 25.0%
! TCAGAAACTAAATTATCTTG+AGG - chr7_3:32423079-32423098 None:intergenic 25.0%
!! ATACAATAGTTTTCATGAAC+TGG + chr7_3:32423243-32423262 Msa1101620:CDS 25.0%
! GAAAGTGATTATCAAAAACT+TGG + chr7_3:32423265-32423284 Msa1101620:CDS 25.0%
!! ATTCAGGTCATAATTTTATC+TGG + chr7_3:32423518-32423537 Msa1101620:CDS 25.0%
!! TTCAGGTCATAATTTTATCT+GGG + chr7_3:32423519-32423538 Msa1101620:CDS 25.0%
!! ATAATTTTATCTGGGTTGTA+AGG + chr7_3:32423527-32423546 Msa1101620:CDS 25.0%
! TAAAATTGATCACCAAACAT+TGG - chr7_3:32423757-32423776 None:intergenic 25.0%
! GAATAAATGTTACATGAAGT+TGG - chr7_3:32422613-32422632 None:intergenic 25.0%
!!! ATTCCAAGAATTCACTTTTA+CGG + chr7_3:32423004-32423023 Msa1101620:CDS 25.0%
! TCAGAAACTAAATTATCTTG+AGG - chr7_3:32423079-32423098 None:intergenic 25.0%
!! ATACAATAGTTTTCATGAAC+TGG + chr7_3:32423243-32423262 Msa1101620:CDS 25.0%
! GAAAGTGATTATCAAAAACT+TGG + chr7_3:32423265-32423284 Msa1101620:CDS 25.0%
!! ATTCAGGTCATAATTTTATC+TGG + chr7_3:32423518-32423537 Msa1101620:CDS 25.0%
!! TTCAGGTCATAATTTTATCT+GGG + chr7_3:32423519-32423538 Msa1101620:CDS 25.0%
!! ATAATTTTATCTGGGTTGTA+AGG + chr7_3:32423527-32423546 Msa1101620:CDS 25.0%
! TAAAATTGATCACCAAACAT+TGG - chr7_3:32423757-32423776 None:intergenic 25.0%
! TGTTACATGAAGTTGGTTAT+GGG - chr7_3:32422606-32422625 None:intergenic 30.0%
! ATGTTACATGAAGTTGGTTA+TGG - chr7_3:32422607-32422626 None:intergenic 30.0%
TGTCAATCATAGGATTCATA+TGG - chr7_3:32422652-32422671 None:intergenic 30.0%
ATATCTGTCACTATACAATC+AGG - chr7_3:32422944-32422963 None:intergenic 30.0%
GAATCACAGAGAAAAAGTTA+TGG + chr7_3:32423214-32423233 Msa1101620:CDS 30.0%
TAACAAGGATGATGAAAAGA+AGG + chr7_3:32423342-32423361 Msa1101620:CDS 30.0%
AACAAGGATGATGAAAAGAA+GGG + chr7_3:32423343-32423362 Msa1101620:CDS 30.0%
TCCAAAACTTACATACAGTA+CGG - chr7_3:32423443-32423462 None:intergenic 30.0%
AAGGATGAAAGAAAGCAAAA+AGG + chr7_3:32423600-32423619 Msa1101620:CDS 30.0%
AGGATGAAAGAAAGCAAAAA+GGG + chr7_3:32423601-32423620 Msa1101620:CDS 30.0%
GAGCAATAGAAAACAAGTTA+TGG + chr7_3:32423824-32423843 Msa1101620:CDS 30.0%
!! AAGGCTGTAGAGATTTTAAT+GGG + chr7_3:32423895-32423914 Msa1101620:CDS 30.0%
! TTGAAGAAATCTAAAGCACT+CGG + chr7_3:32424045-32424064 Msa1101620:CDS 30.0%
! TGTTACATGAAGTTGGTTAT+GGG - chr7_3:32422606-32422625 None:intergenic 30.0%
! ATGTTACATGAAGTTGGTTA+TGG - chr7_3:32422607-32422626 None:intergenic 30.0%
TGTCAATCATAGGATTCATA+TGG - chr7_3:32422652-32422671 None:intergenic 30.0%
ATATCTGTCACTATACAATC+AGG - chr7_3:32422944-32422963 None:intergenic 30.0%
GAATCACAGAGAAAAAGTTA+TGG + chr7_3:32423214-32423233 Msa1101620:CDS 30.0%
TAACAAGGATGATGAAAAGA+AGG + chr7_3:32423342-32423361 Msa1101620:CDS 30.0%
AACAAGGATGATGAAAAGAA+GGG + chr7_3:32423343-32423362 Msa1101620:CDS 30.0%
TCCAAAACTTACATACAGTA+CGG - chr7_3:32423443-32423462 None:intergenic 30.0%
AAGGATGAAAGAAAGCAAAA+AGG + chr7_3:32423600-32423619 Msa1101620:CDS 30.0%
AGGATGAAAGAAAGCAAAAA+GGG + chr7_3:32423601-32423620 Msa1101620:CDS 30.0%
GAGCAATAGAAAACAAGTTA+TGG + chr7_3:32423824-32423843 Msa1101620:CDS 30.0%
!! AAGGCTGTAGAGATTTTAAT+GGG + chr7_3:32423895-32423914 Msa1101620:CDS 30.0%
! TTGAAGAAATCTAAAGCACT+CGG + chr7_3:32424045-32424064 Msa1101620:CDS 30.0%
AATCTTGCAGTGTCAATCAT+AGG - chr7_3:32422662-32422681 None:intergenic 35.0%
!! GCAAGATTATTTGCTATGCA+TGG + chr7_3:32422674-32422693 Msa1101620:CDS 35.0%
ATTAGCATGTGTAGCTATGA+TGG - chr7_3:32422711-32422730 None:intergenic 35.0%
TGAATTGAAGTCACTGTCTA+TGG - chr7_3:32422753-32422772 None:intergenic 35.0%
ATAGACAGTGACTTCAATTC+AGG + chr7_3:32422752-32422771 Msa1101620:CDS 35.0%
! TGAAGTTTTCAACACCATCA+GGG - chr7_3:32422829-32422848 None:intergenic 35.0%
! TTGAAGTTTTCAACACCATC+AGG - chr7_3:32422830-32422849 None:intergenic 35.0%
ATACAACAAAAAATCGGCCT+TGG + chr7_3:32422869-32422888 Msa1101620:CDS 35.0%
!! TCACTATACAATCAGGTTGA+AGG - chr7_3:32422937-32422956 None:intergenic 35.0%
!!! ACCTAGTTTTGAAGCTTGTT+CGG - chr7_3:32422984-32423003 None:intergenic 35.0%
AAGCCGTAAAAGTGAATTCT+TGG - chr7_3:32423010-32423029 None:intergenic 35.0%
TCAATTGTATGAGGAAAGCA+AGG - chr7_3:32423121-32423140 None:intergenic 35.0%
CTCTTTGTCCTTATCCAATT+AGG - chr7_3:32423163-32423182 None:intergenic 35.0%
! AAAACTTGGTAACACTAGCA+TGG + chr7_3:32423279-32423298 Msa1101620:CDS 35.0%
! AAACTTGGTAACACTAGCAT+GGG + chr7_3:32423280-32423299 Msa1101620:CDS 35.0%
ATGATGAAAAGAAGGGCAAT+AGG + chr7_3:32423350-32423369 Msa1101620:CDS 35.0%
TGATGAAAAGAAGGGCAATA+GGG + chr7_3:32423351-32423370 Msa1101620:CDS 35.0%
! TCCGTACTGTATGTAAGTTT+TGG + chr7_3:32423439-32423458 Msa1101620:CDS 35.0%
!!! TAAGTTTTGGAAGTCTAGCT+AGG + chr7_3:32423452-32423471 Msa1101620:CDS 35.0%
AGCTTGTAGAAATTGCACAT+GGG + chr7_3:32423488-32423507 Msa1101620:CDS 35.0%
TATCTGGGTTGTAAGGAAAA+AGG + chr7_3:32423534-32423553 Msa1101620:CDS 35.0%
! CACTTTCCTTCAAGATTTTG+AGG + chr7_3:32423576-32423595 Msa1101620:CDS 35.0%
!! TCCTTCAAGATTTTGAGGAA+AGG + chr7_3:32423581-32423600 Msa1101620:CDS 35.0%
TCCTTTCCTCAAAATCTTGA+AGG - chr7_3:32423585-32423604 None:intergenic 35.0%
GCAAAAAGGGCTATATCATA+TGG + chr7_3:32423614-32423633 Msa1101620:CDS 35.0%
AGGGCTATATCATATGGAAT+TGG + chr7_3:32423620-32423639 Msa1101620:CDS 35.0%
GGGCTATATCATATGGAATT+GGG + chr7_3:32423621-32423640 Msa1101620:CDS 35.0%
TGATCCAATATAAAGAGCTG+TGG - chr7_3:32423649-32423668 None:intergenic 35.0%
! ACTCTTGAAAGCATAAATGC+TGG + chr7_3:32423712-32423731 Msa1101620:CDS 35.0%
AACATTGGCCATGTAATCAT+TGG - chr7_3:32423742-32423761 None:intergenic 35.0%
ATGATTACATGGCCAATGTT+TGG + chr7_3:32423742-32423761 Msa1101620:CDS 35.0%
!!! CGTTGATGTTTTGAAGATAG+CGG + chr7_3:32423792-32423811 Msa1101620:CDS 35.0%
! TGTTTTCTATTGCTCCAACT+GGG - chr7_3:32423819-32423838 None:intergenic 35.0%
! TTGTTTTCTATTGCTCCAAC+TGG - chr7_3:32423820-32423839 None:intergenic 35.0%
TGAAGATGTAGTGGTGAAAA+GGG + chr7_3:32423861-32423880 Msa1101620:CDS 35.0%
! GAAGGCTGTAGAGATTTTAA+TGG + chr7_3:32423894-32423913 Msa1101620:CDS 35.0%
!! GTAGAGATTTTAATGGGAAG+TGG + chr7_3:32423901-32423920 Msa1101620:CDS 35.0%
AATCTTGCAGTGTCAATCAT+AGG - chr7_3:32422662-32422681 None:intergenic 35.0%
!! GCAAGATTATTTGCTATGCA+TGG + chr7_3:32422674-32422693 Msa1101620:CDS 35.0%
ATTAGCATGTGTAGCTATGA+TGG - chr7_3:32422711-32422730 None:intergenic 35.0%
TGAATTGAAGTCACTGTCTA+TGG - chr7_3:32422753-32422772 None:intergenic 35.0%
ATAGACAGTGACTTCAATTC+AGG + chr7_3:32422752-32422771 Msa1101620:CDS 35.0%
! TGAAGTTTTCAACACCATCA+GGG - chr7_3:32422829-32422848 None:intergenic 35.0%
! TTGAAGTTTTCAACACCATC+AGG - chr7_3:32422830-32422849 None:intergenic 35.0%
ATACAACAAAAAATCGGCCT+TGG + chr7_3:32422869-32422888 Msa1101620:CDS 35.0%
!! TCACTATACAATCAGGTTGA+AGG - chr7_3:32422937-32422956 None:intergenic 35.0%
!!! ACCTAGTTTTGAAGCTTGTT+CGG - chr7_3:32422984-32423003 None:intergenic 35.0%
AAGCCGTAAAAGTGAATTCT+TGG - chr7_3:32423010-32423029 None:intergenic 35.0%
TCAATTGTATGAGGAAAGCA+AGG - chr7_3:32423121-32423140 None:intergenic 35.0%
CTCTTTGTCCTTATCCAATT+AGG - chr7_3:32423163-32423182 None:intergenic 35.0%
! AAAACTTGGTAACACTAGCA+TGG + chr7_3:32423279-32423298 Msa1101620:CDS 35.0%
! AAACTTGGTAACACTAGCAT+GGG + chr7_3:32423280-32423299 Msa1101620:CDS 35.0%
ATGATGAAAAGAAGGGCAAT+AGG + chr7_3:32423350-32423369 Msa1101620:CDS 35.0%
TGATGAAAAGAAGGGCAATA+GGG + chr7_3:32423351-32423370 Msa1101620:CDS 35.0%
! TCCGTACTGTATGTAAGTTT+TGG + chr7_3:32423439-32423458 Msa1101620:CDS 35.0%
!!! TAAGTTTTGGAAGTCTAGCT+AGG + chr7_3:32423452-32423471 Msa1101620:CDS 35.0%
AGCTTGTAGAAATTGCACAT+GGG + chr7_3:32423488-32423507 Msa1101620:CDS 35.0%
TATCTGGGTTGTAAGGAAAA+AGG + chr7_3:32423534-32423553 Msa1101620:CDS 35.0%
! CACTTTCCTTCAAGATTTTG+AGG + chr7_3:32423576-32423595 Msa1101620:CDS 35.0%
!! TCCTTCAAGATTTTGAGGAA+AGG + chr7_3:32423581-32423600 Msa1101620:CDS 35.0%
TCCTTTCCTCAAAATCTTGA+AGG - chr7_3:32423585-32423604 None:intergenic 35.0%
GCAAAAAGGGCTATATCATA+TGG + chr7_3:32423614-32423633 Msa1101620:CDS 35.0%
AGGGCTATATCATATGGAAT+TGG + chr7_3:32423620-32423639 Msa1101620:CDS 35.0%
GGGCTATATCATATGGAATT+GGG + chr7_3:32423621-32423640 Msa1101620:CDS 35.0%
TGATCCAATATAAAGAGCTG+TGG - chr7_3:32423649-32423668 None:intergenic 35.0%
! ACTCTTGAAAGCATAAATGC+TGG + chr7_3:32423712-32423731 Msa1101620:CDS 35.0%
AACATTGGCCATGTAATCAT+TGG - chr7_3:32423742-32423761 None:intergenic 35.0%
ATGATTACATGGCCAATGTT+TGG + chr7_3:32423742-32423761 Msa1101620:CDS 35.0%
!!! CGTTGATGTTTTGAAGATAG+CGG + chr7_3:32423792-32423811 Msa1101620:CDS 35.0%
! TGTTTTCTATTGCTCCAACT+GGG - chr7_3:32423819-32423838 None:intergenic 35.0%
! TTGTTTTCTATTGCTCCAAC+TGG - chr7_3:32423820-32423839 None:intergenic 35.0%
TGAAGATGTAGTGGTGAAAA+GGG + chr7_3:32423861-32423880 Msa1101620:CDS 35.0%
! GAAGGCTGTAGAGATTTTAA+TGG + chr7_3:32423894-32423913 Msa1101620:CDS 35.0%
!! GTAGAGATTTTAATGGGAAG+TGG + chr7_3:32423901-32423920 Msa1101620:CDS 35.0%
TTTATTCCACATCCAAGTCC+TGG + chr7_3:32422626-32422645 Msa1101620:CDS 40.0%
ATCATAGGATTCATATGGCC+AGG - chr7_3:32422647-32422666 None:intergenic 40.0%
!! TATGGCTTTCTGGAATGTTG+AGG - chr7_3:32422735-32422754 None:intergenic 40.0%
!!! TAGTTTTGAAGCTTGTTCGG+CGG - chr7_3:32422981-32423000 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_3:32423130-32423149 None:intergenic 40.0%
TGCAGCTTCCTAATTGGATA+AGG + chr7_3:32423152-32423171 Msa1101620:CDS 40.0%
GCTTCAAAATAGTCAGTGTG+AGG - chr7_3:32423187-32423206 None:intergenic 40.0%
! AACTTGGTAACACTAGCATG+GGG + chr7_3:32423281-32423300 Msa1101620:CDS 40.0%
TGTAGGACCAGTTTCATCAT+GGG + chr7_3:32423318-32423337 Msa1101620:CDS 40.0%
TTGTTAGCCCATGATGAAAC+TGG - chr7_3:32423328-32423347 None:intergenic 40.0%
! AGTTTCATCATGGGCTAACA+AGG + chr7_3:32423327-32423346 Msa1101620:CDS 40.0%
GATGAAAAGAAGGGCAATAG+GGG + chr7_3:32423352-32423371 Msa1101620:CDS 40.0%
! AAGAGGCAGACTGGTTAAAT+TGG + chr7_3:32423395-32423414 Msa1101620:CDS 40.0%
CAGCTTGTAGAAATTGCACA+TGG + chr7_3:32423487-32423506 Msa1101620:CDS 40.0%
GGTTGTAAGGAAAAAGGAGA+GGG + chr7_3:32423540-32423559 Msa1101620:CDS 40.0%
! CTGGTTTGCCAATGATTACA+TGG + chr7_3:32423731-32423750 Msa1101620:CDS 40.0%
CACTAGTAGTGAAGATGTAG+TGG + chr7_3:32423852-32423871 Msa1101620:CDS 40.0%
GTGAAGATGTAGTGGTGAAA+AGG + chr7_3:32423860-32423879 Msa1101620:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_3:32423927-32423946 None:intergenic 40.0%
TTTATTCCACATCCAAGTCC+TGG + chr7_3:32422626-32422645 Msa1101620:CDS 40.0%
ATCATAGGATTCATATGGCC+AGG - chr7_3:32422647-32422666 None:intergenic 40.0%
!! TATGGCTTTCTGGAATGTTG+AGG - chr7_3:32422735-32422754 None:intergenic 40.0%
!!! TAGTTTTGAAGCTTGTTCGG+CGG - chr7_3:32422981-32423000 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_3:32423130-32423149 None:intergenic 40.0%
TGCAGCTTCCTAATTGGATA+AGG + chr7_3:32423152-32423171 Msa1101620:CDS 40.0%
GCTTCAAAATAGTCAGTGTG+AGG - chr7_3:32423187-32423206 None:intergenic 40.0%
! AACTTGGTAACACTAGCATG+GGG + chr7_3:32423281-32423300 Msa1101620:CDS 40.0%
TGTAGGACCAGTTTCATCAT+GGG + chr7_3:32423318-32423337 Msa1101620:CDS 40.0%
TTGTTAGCCCATGATGAAAC+TGG - chr7_3:32423328-32423347 None:intergenic 40.0%
! AGTTTCATCATGGGCTAACA+AGG + chr7_3:32423327-32423346 Msa1101620:CDS 40.0%
GATGAAAAGAAGGGCAATAG+GGG + chr7_3:32423352-32423371 Msa1101620:CDS 40.0%
! AAGAGGCAGACTGGTTAAAT+TGG + chr7_3:32423395-32423414 Msa1101620:CDS 40.0%
CAGCTTGTAGAAATTGCACA+TGG + chr7_3:32423487-32423506 Msa1101620:CDS 40.0%
GGTTGTAAGGAAAAAGGAGA+GGG + chr7_3:32423540-32423559 Msa1101620:CDS 40.0%
! CTGGTTTGCCAATGATTACA+TGG + chr7_3:32423731-32423750 Msa1101620:CDS 40.0%
CACTAGTAGTGAAGATGTAG+TGG + chr7_3:32423852-32423871 Msa1101620:CDS 40.0%
GTGAAGATGTAGTGGTGAAA+AGG + chr7_3:32423860-32423879 Msa1101620:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_3:32423927-32423946 None:intergenic 40.0%
AGTCACTGTCTATGGCTTTC+TGG - chr7_3:32422745-32422764 None:intergenic 45.0%
GCAAAGCCTCAATCGAATCT+CGG - chr7_3:32422907-32422926 None:intergenic 45.0%
TGACAGATATGATGCAGCCT+TGG + chr7_3:32422954-32422973 Msa1101620:CDS 45.0%
GCCGAACAAGCTTCAAAACT+AGG + chr7_3:32422980-32422999 Msa1101620:CDS 45.0%
GATCAAATCAGCTGCACAGT+TGG - chr7_3:32423044-32423063 None:intergenic 45.0%
ATCCAATTAGGAAGCTGCAG+AGG - chr7_3:32423151-32423170 None:intergenic 45.0%
CTAGCATGGGGATCAAATCT+TGG + chr7_3:32423293-32423312 Msa1101620:CDS 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_3:32423301-32423320 Msa1101620:CDS 45.0%
GTGTAGGACCAGTTTCATCA+TGG + chr7_3:32423317-32423336 Msa1101620:CDS 45.0%
GCACATGGGCTTGAAAATTC+AGG + chr7_3:32423502-32423521 Msa1101620:CDS 45.0%
GGGTTGTAAGGAAAAAGGAG+AGG + chr7_3:32423539-32423558 Msa1101620:CDS 45.0%
GGCACCACAGCTCTTTATAT+TGG + chr7_3:32423642-32423661 Msa1101620:CDS 45.0%
ATATTGGATCACCCTGCAAC+AGG + chr7_3:32423658-32423677 Msa1101620:CDS 45.0%
GAAAAGGGAAGAGATAGCGA+AGG + chr7_3:32423876-32423895 Msa1101620:CDS 45.0%
GCCAAGAGAGCAAAGAAATG+AGG + chr7_3:32423923-32423942 Msa1101620:CDS 45.0%
AGGATGAGAGCGAAGAAACT+TGG + chr7_3:32423943-32423962 Msa1101620:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_3:32423977-32423996 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_3:32423976-32423995 Msa1101620:CDS 45.0%
AGTCACTGTCTATGGCTTTC+TGG - chr7_3:32422745-32422764 None:intergenic 45.0%
GCAAAGCCTCAATCGAATCT+CGG - chr7_3:32422907-32422926 None:intergenic 45.0%
TGACAGATATGATGCAGCCT+TGG + chr7_3:32422954-32422973 Msa1101620:CDS 45.0%
GCCGAACAAGCTTCAAAACT+AGG + chr7_3:32422980-32422999 Msa1101620:CDS 45.0%
GATCAAATCAGCTGCACAGT+TGG - chr7_3:32423044-32423063 None:intergenic 45.0%
ATCCAATTAGGAAGCTGCAG+AGG - chr7_3:32423151-32423170 None:intergenic 45.0%
CTAGCATGGGGATCAAATCT+TGG + chr7_3:32423293-32423312 Msa1101620:CDS 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_3:32423301-32423320 Msa1101620:CDS 45.0%
GTGTAGGACCAGTTTCATCA+TGG + chr7_3:32423317-32423336 Msa1101620:CDS 45.0%
GCACATGGGCTTGAAAATTC+AGG + chr7_3:32423502-32423521 Msa1101620:CDS 45.0%
GGGTTGTAAGGAAAAAGGAG+AGG + chr7_3:32423539-32423558 Msa1101620:CDS 45.0%
GGCACCACAGCTCTTTATAT+TGG + chr7_3:32423642-32423661 Msa1101620:CDS 45.0%
ATATTGGATCACCCTGCAAC+AGG + chr7_3:32423658-32423677 Msa1101620:CDS 45.0%
GAAAAGGGAAGAGATAGCGA+AGG + chr7_3:32423876-32423895 Msa1101620:CDS 45.0%
GCCAAGAGAGCAAAGAAATG+AGG + chr7_3:32423923-32423942 Msa1101620:CDS 45.0%
AGGATGAGAGCGAAGAAACT+TGG + chr7_3:32423943-32423962 Msa1101620:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_3:32423977-32423996 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_3:32423976-32423995 Msa1101620:CDS 45.0%
ATATGGCCAGGACTTGGATG+TGG - chr7_3:32422635-32422654 None:intergenic 50.0%
GGATTCATATGGCCAGGACT+TGG - chr7_3:32422641-32422660 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_3:32422800-32422819 Msa1101620:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_3:32422808-32422827 None:intergenic 50.0%
CTCGGAGCATGTATGTTCCA+AGG - chr7_3:32422889-32422908 None:intergenic 50.0%
CATGCTCCGAGATTCGATTG+AGG + chr7_3:32422898-32422917 Msa1101620:CDS 50.0%
CTCCTCTGCAGCTTCCTAAT+TGG + chr7_3:32423146-32423165 Msa1101620:CDS 50.0%
CATGGAGGAGCTTGCAAAAG+AGG + chr7_3:32423378-32423397 Msa1101620:CDS 50.0%
AGCTTGCAAAAGAGGCAGAC+TGG + chr7_3:32423386-32423405 Msa1101620:CDS 50.0%
TCACAATCGCTCCTGTTGCA+GGG - chr7_3:32423672-32423691 None:intergenic 50.0%
CGATTGTGACTCACTGTGGT+TGG + chr7_3:32423683-32423702 Msa1101620:CDS 50.0%
! TTGAAGATAGCGGTCCCAGT+TGG + chr7_3:32423802-32423821 Msa1101620:CDS 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_3:32423959-32423978 Msa1101620:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_3:32423969-32423988 Msa1101620:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_3:32423973-32423992 Msa1101620:CDS 50.0%
ATATGGCCAGGACTTGGATG+TGG - chr7_3:32422635-32422654 None:intergenic 50.0%
GGATTCATATGGCCAGGACT+TGG - chr7_3:32422641-32422660 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_3:32422800-32422819 Msa1101620:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_3:32422808-32422827 None:intergenic 50.0%
CTCGGAGCATGTATGTTCCA+AGG - chr7_3:32422889-32422908 None:intergenic 50.0%
CATGCTCCGAGATTCGATTG+AGG + chr7_3:32422898-32422917 Msa1101620:CDS 50.0%
CTCCTCTGCAGCTTCCTAAT+TGG + chr7_3:32423146-32423165 Msa1101620:CDS 50.0%
CATGGAGGAGCTTGCAAAAG+AGG + chr7_3:32423378-32423397 Msa1101620:CDS 50.0%
AGCTTGCAAAAGAGGCAGAC+TGG + chr7_3:32423386-32423405 Msa1101620:CDS 50.0%
TCACAATCGCTCCTGTTGCA+GGG - chr7_3:32423672-32423691 None:intergenic 50.0%
CGATTGTGACTCACTGTGGT+TGG + chr7_3:32423683-32423702 Msa1101620:CDS 50.0%
! TTGAAGATAGCGGTCCCAGT+TGG + chr7_3:32423802-32423821 Msa1101620:CDS 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_3:32423959-32423978 Msa1101620:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_3:32423969-32423988 Msa1101620:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_3:32423973-32423992 Msa1101620:CDS 50.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_3:32422809-32422828 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+TGG + chr7_3:32422812-32422831 Msa1101620:CDS 55.0%
GAAGGGCAATAGGGGACACA+TGG + chr7_3:32423360-32423379 Msa1101620:CDS 55.0%
GTCACAATCGCTCCTGTTGC+AGG - chr7_3:32423673-32423692 None:intergenic 55.0%
GGAGCGATTGTGACTCACTG+TGG + chr7_3:32423679-32423698 Msa1101620:CDS 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_3:32422809-32422828 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+TGG + chr7_3:32422812-32422831 Msa1101620:CDS 55.0%
GAAGGGCAATAGGGGACACA+TGG + chr7_3:32423360-32423379 Msa1101620:CDS 55.0%
GTCACAATCGCTCCTGTTGC+AGG - chr7_3:32423673-32423692 None:intergenic 55.0%
GGAGCGATTGTGACTCACTG+TGG + chr7_3:32423679-32423698 Msa1101620:CDS 55.0%
! GAAGCTTGTTCGGCGGTCCA+AGG - chr7_3:32422974-32422993 None:intergenic 60.0%
GGGCAATAGGGGACACATGG+AGG + chr7_3:32423363-32423382 Msa1101620:CDS 60.0%
! GAAGCTTGTTCGGCGGTCCA+AGG - chr7_3:32422974-32422993 None:intergenic 60.0%
GGGCAATAGGGGACACATGG+AGG + chr7_3:32423363-32423382 Msa1101620:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 32422587 32424107 32422587 ID=Msa1101620;Name=Msa1101620
chr7_3 mRNA 32422587 32424107 32422587 ID=Msa1101620-mRNA-1;Parent=Msa1101620;Name=Msa1101620-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|506
chr7_3 exon 32422587 32424107 32422587 ID=Msa1101620-mRNA-1:exon:7056;Parent=Msa1101620-mRNA-1
chr7_3 CDS 32422587 32424107 32422587 ID=Msa1101620-mRNA-1:cds;Parent=Msa1101620-mRNA-1
Gene Sequence

>Msa1101620

ATGGAATCTCAACAATCCCATAACCAACTTCATGTAACATTTATTCCACATCCAAGTCCTGGCCATATGAATCCTATGATTGACACTGCAAGATTATTTGCTATGCATGGTGTTAATGTTACCATCATAGCTACACATGCTAATGCCTCAACATTCCAGAAAGCCATAGACAGTGACTTCAATTCAGGATACCCTATTAAAACTCAACTTATTCAGTTCCCTTCAGCTCAAGTTGGTCTCCCTGATGGTGTTGAAAACTTCAAAGATGCAACTTCATTTGAAATACAACAAAAAATCGGCCTTGGAACATACATGCTCCGAGATTCGATTGAGGCTTTGCTTCAAGACCTTCAACCTGATTGTATAGTGACAGATATGATGCAGCCTTGGACCGCCGAACAAGCTTCAAAACTAGGTATTCCAAGAATTCACTTTTACGGCTTAAGCATCTTCTCCAACTGTGCAGCTGATTTGATCATGAAGTATAGACCTCAAGATAATTTAGTTTCTGATACACAGAAATTTACTATTCCTTGCTTTCCTCATACAATTGAGATGACTCCTCTGCAGCTTCCTAATTGGATAAGGACAAAGAGTCCTCACACTGACTATTTTGAAGCAATGTTTGAATCACAGAGAAAAAGTTATGGAACATTATACAATAGTTTTCATGAACTGGAAAGTGATTATCAAAAACTTGGTAACACTAGCATGGGGATCAAATCTTGGAGTGTAGGACCAGTTTCATCATGGGCTAACAAGGATGATGAAAAGAAGGGCAATAGGGGACACATGGAGGAGCTTGCAAAAGAGGCAGACTGGTTAAATTGGCTTAACTCAAAGCAAAACGAGTCCGTACTGTATGTAAGTTTTGGAAGTCTAGCTAGGCTAACTCATGCTCAGCTTGTAGAAATTGCACATGGGCTTGAAAATTCAGGTCATAATTTTATCTGGGTTGTAAGGAAAAAGGAGAGGGATGAGAGTGAAAACACTTTCCTTCAAGATTTTGAGGAAAGGATGAAAGAAAGCAAAAAGGGCTATATCATATGGAATTGGGCACCACAGCTCTTTATATTGGATCACCCTGCAACAGGAGCGATTGTGACTCACTGTGGTTGGAACTCAACTCTTGAAAGCATAAATGCTGGTTTGCCAATGATTACATGGCCAATGTTTGGTGATCAATTTTACAATGAAAAGTTGCTCGTTGATGTTTTGAAGATAGCGGTCCCAGTTGGAGCAATAGAAAACAAGTTATGGACTAGCACTAGTAGTGAAGATGTAGTGGTGAAAAGGGAAGAGATAGCGAAGGCTGTAGAGATTTTAATGGGAAGTGGCCAAGAGAGCAAAGAAATGAGGATGAGAGCGAAGAAACTTGGTGATGCTGCCAAGAGGACTATAGAGGAAGGTGGACACTCTTACAACAACTTGATTCAGTTGATTGATGAACTGAAATCATTGAAGAAATCTAAAGCACTCGGTAATAAAGAAGATCAGACAATTCAAATGAAGATGATGTAA

Protein sequence

>Msa1101620

MESQQSHNQLHVTFIPHPSPGHMNPMIDTARLFAMHGVNVTIIATHANASTFQKAIDSDFNSGYPIKTQLIQFPSAQVGLPDGVENFKDATSFEIQQKIGLGTYMLRDSIEALLQDLQPDCIVTDMMQPWTAEQASKLGIPRIHFYGLSIFSNCAADLIMKYRPQDNLVSDTQKFTIPCFPHTIEMTPLQLPNWIRTKSPHTDYFEAMFESQRKSYGTLYNSFHELESDYQKLGNTSMGIKSWSVGPVSSWANKDDEKKGNRGHMEELAKEADWLNWLNSKQNESVLYVSFGSLARLTHAQLVEIAHGLENSGHNFIWVVRKKERDESENTFLQDFEERMKESKKGYIIWNWAPQLFILDHPATGAIVTHCGWNSTLESINAGLPMITWPMFGDQFYNEKLLVDVLKIAVPVGAIENKLWTSTSSEDVVVKREEIAKAVEILMGSGQESKEMRMRAKKLGDAAKRTIEEGGHSYNNLIQLIDELKSLKKSKALGNKEDQTIQMKMM*