AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1071920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1071920 MtrunA17_Chr7g0253781 99.869 763 1 0 1 763 1 763 0.0 1571
Msa1071920 MtrunA17_Chr6g0461111 86.745 762 101 0 1 762 1 762 0.0 1384
Msa1071920 MtrunA17_Chr3g0118901 84.321 759 119 0 4 762 52 810 0.0 1342
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1071920 AT5G17920.2 87.927 762 92 0 1 762 1 762 0.0 1408
Msa1071920 AT5G17920.1 87.927 762 92 0 1 762 1 762 0.0 1408
Msa1071920 AT3G03780.1 85.696 762 109 0 1 762 1 762 0.0 1372
Msa1071920 AT3G03780.3 85.696 762 109 0 1 762 1 762 0.0 1372
Msa1071920 AT3G03780.2 85.696 762 109 0 1 762 1 762 0.0 1372
Msa1071920 AT5G20980.2 78.375 763 165 0 1 763 49 811 0.0 1271
Msa1071920 AT5G20980.1 78.375 763 165 0 1 763 49 811 0.0 1271

Find 255 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGGGGTAAAATGAAATTT+TGG 0.152282 7_2:+68738754 None:intergenic
CCAGATTGCTTTGGCTATTA+AGG 0.168335 7_2:-68739534 Msa1071920:CDS
AATAACTGTGTGCAATATTT+AGG 0.188710 7_2:-68738815 Msa1071920:three_prime_UTR
TTGAGTGGTGTCGCCGCTTA+TGG 0.211110 7_2:-68741478 Msa1071920:CDS
TTCACCTCGGGACCCAATTC+TGG 0.220600 7_2:+68742477 None:intergenic
AATTTGCTTTGGAATCATTC+TGG 0.250181 7_2:-68742894 Msa1071920:CDS
TCAAAGCAGCCTCATCAATT+TGG 0.261068 7_2:+68739471 None:intergenic
CATTCATTCCATCATTGATA+TGG 0.263056 7_2:-68739225 Msa1071920:CDS
CGTCAGTTGGTGGGATTCTT+GGG 0.264034 7_2:+68739087 None:intergenic
TTCCGTGAAGGAGTTGTTTA+TGG 0.264508 7_2:-68739146 Msa1071920:CDS
GTCAACTCCCTTGGCGGCTT+TGG 0.265173 7_2:+68741850 None:intergenic
CCCTCCTTAGTTCCACGGTC+TGG 0.268662 7_2:+68740372 None:intergenic
CATGATTATTTGCACAAAAC+TGG 0.282796 7_2:+68738665 None:intergenic
CCACTTTATTGTCCCAGAAT+TGG 0.283271 7_2:-68742490 Msa1071920:CDS
CCAATGAAGGGAATGCTTAC+TGG 0.290945 7_2:-68739746 Msa1071920:CDS
CTGGATTTCCCAGTGGAAAA+TGG 0.292476 7_2:-68741411 Msa1071920:CDS
TCGTCAGTTGGTGGGATTCT+TGG 0.294764 7_2:+68739086 None:intergenic
CTCTGCAAGTTCTGCAGCTC+AGG 0.318713 7_2:-68740660 Msa1071920:CDS
AGCAAATTTCAACTCTCTCT+TGG 0.323635 7_2:+68742909 None:intergenic
GCTTTATACCTTAAAATACT+AGG 0.326032 7_2:-68738613 Msa1071920:three_prime_UTR
CTTTCAGGCTGCTGCATTGA+AGG 0.334340 7_2:-68740498 Msa1071920:intron
CACTTTATTGTCCCAGAATT+GGG 0.341529 7_2:-68742489 Msa1071920:CDS
GGCTTCTCTCAGTACATTAG+AGG 0.347630 7_2:-68741338 Msa1071920:CDS
GCATTGGCTAATGCACTTGC+AGG 0.348832 7_2:-68741071 Msa1071920:CDS
GAGAGAGTTGAAATTTGCTT+TGG 0.348888 7_2:-68742905 Msa1071920:CDS
CAGAAGACAGTCATTGCCTT+TGG 0.350697 7_2:+68739800 None:intergenic
AGAGTACATTAAGGCAATTA+AGG 0.356445 7_2:-68740231 Msa1071920:CDS
CAAAGGCAATGACTGTCTTC+TGG 0.357313 7_2:-68739799 Msa1071920:CDS
CCAGTAAGCATTCCCTTCAT+TGG 0.357787 7_2:+68739746 None:intergenic
AATCACCAATGTCGGTGTTC+AGG 0.357796 7_2:-68739381 Msa1071920:CDS
GGCTTCGCCTTTACTGCTAA+TGG 0.364303 7_2:-68739887 Msa1071920:CDS
GAGAGCAACAAGTATGAAAC+AGG 0.367592 7_2:+68741872 None:intergenic
ATCTTCTTCGCTTCTTGTTA+AGG 0.369718 7_2:+68743696 None:intergenic
CTTAACCTCTGTGTACTTAC+GGG 0.374221 7_2:+68738983 None:intergenic
GCTTAACCTCTGTGTACTTA+CGG 0.383228 7_2:+68738982 None:intergenic
CAGTAAGCATTCCCTTCATT+GGG 0.383689 7_2:+68739747 None:intergenic
CCTCCTTAGTTCCACGGTCT+GGG 0.391526 7_2:+68740373 None:intergenic
AAGCTCGTTACGGATTTGTT+TGG 0.391968 7_2:+68738932 None:intergenic
ATGATCCAATGGTGGTGGTT+GGG 0.395881 7_2:+68740399 None:intergenic
TCGTTGATGGAAGGAACATC+TGG 0.398500 7_2:-68741375 Msa1071920:CDS
ACTTCTTAGCCTTGAATTCA+CGG 0.402531 7_2:+68740345 None:intergenic
GGATGGACTGGTGGTGAGAT+TGG 0.403071 7_2:-68742700 Msa1071920:CDS
GTTGTTTATGGTGCTGGAAT+TGG 0.403152 7_2:-68739134 Msa1071920:CDS
TACTTTGGCGAGCAGTTGTC+AGG 0.403155 7_2:-68739908 Msa1071920:CDS
AGTGGAAAATGGATCTTTGC+TGG 0.403330 7_2:-68741400 Msa1071920:CDS
CCTCGGGCTCTCCGTGTACT+AGG 0.405131 7_2:+68740159 None:intergenic
GACACTGTTCCCGTTCTTGT+TGG 0.406603 7_2:-68741896 Msa1071920:CDS
ATCTTTGCTGGAGTCGTTGA+TGG 0.408358 7_2:-68741388 Msa1071920:CDS
AGCACGCTCACTACTTGGAC+TGG 0.412551 7_2:-68739421 Msa1071920:CDS
GGAGGTTATTGCTGATCTTA+AGG 0.413201 7_2:-68741683 Msa1071920:CDS
GTCAAGCCACCAATCATCTA+TGG 0.414314 7_2:-68739836 Msa1071920:CDS
GTCCGAGCACGCTCACTACT+TGG 0.414790 7_2:-68739426 Msa1071920:CDS
ATGGTGGTGGTTGGGAGGAT+TGG 0.414964 7_2:+68740407 None:intergenic
AAAATGGCTTCTCACATTGT+TGG 0.417361 7_2:-68742949 Msa1071920:CDS
AGAAGACAGTCATTGCCTTT+GGG 0.421292 7_2:+68739801 None:intergenic
CTTAATTTCATCATCCAACT+TGG 0.422844 7_2:+68741136 None:intergenic
GTTCTGCAGCTCAGGCTTCA+AGG 0.423524 7_2:-68740652 Msa1071920:CDS
ATTTGCTTTGGAATCATTCT+GGG 0.424933 7_2:-68742893 Msa1071920:CDS
TTCACTTGGCAAGCTCGTTA+CGG 0.424936 7_2:+68738922 None:intergenic
CAGTGCCGAGGATTTGAAGA+AGG 0.427889 7_2:-68742860 Msa1071920:CDS
GCAAATTTCAACTCTCTCTT+GGG 0.427892 7_2:+68742910 None:intergenic
TGATGAACCCACACTTGTCC+TGG 0.428099 7_2:-68741635 Msa1071920:CDS
ACTCTTGATTTGATCAAGGC+TGG 0.428427 7_2:-68741430 Msa1071920:CDS
GCCCTGTCACCATTCTCAAC+TGG 0.432386 7_2:-68739724 Msa1071920:CDS
CATTCCCTTCATTGGGCGCT+TGG 0.433045 7_2:+68739754 None:intergenic
CTCCGAGGAAGAGTACATTA+AGG 0.440393 7_2:-68740240 Msa1071920:CDS
CTGATCTAAGAGCATCCATC+TGG 0.440680 7_2:-68742831 Msa1071920:CDS
GAGGCTCTTGCCGGCATTGT+GGG 0.441484 7_2:-68741319 Msa1071920:CDS
TCGCCTTTACTGCTAATGGA+TGG 0.442946 7_2:-68739883 Msa1071920:CDS
AGAGGCTCTTGCCGGCATTG+TGG 0.443385 7_2:-68741320 Msa1071920:CDS
CGCCTTTACTGCTAATGGAT+GGG 0.444739 7_2:-68739882 Msa1071920:CDS
AATGATATGGTTGAGTACTT+TGG 0.446026 7_2:-68739923 Msa1071920:CDS
CCTTAATAGCCAAAGCAATC+TGG 0.448275 7_2:+68739534 None:intergenic
GAAACAGGGCCAACAAGAAC+GGG 0.453352 7_2:+68741887 None:intergenic
CTTGTAGACGGCAAGGACCT+TGG 0.453971 7_2:+68741799 None:intergenic
GAGGGTTCGCCGTGAATTCA+AGG 0.455640 7_2:-68740354 Msa1071920:CDS
TTGTAGACGGCAAGGACCTT+GGG 0.455997 7_2:+68741800 None:intergenic
CCACGATGTGACAATATCCT+TGG 0.456510 7_2:+68738568 None:intergenic
CACCCATCCATTAGCAGTAA+AGG 0.457339 7_2:+68739880 None:intergenic
ATCTGTTTGATTTACACAAA+AGG 0.459878 7_2:-68738862 Msa1071920:three_prime_UTR
CACCATAAACAACTCCTTCA+CGG 0.461766 7_2:+68739144 None:intergenic
GGACCTTGGGAAGCAAAGAT+AGG 0.467226 7_2:+68741813 None:intergenic
AGTAAGTAAAAGTGTTGCTT+GGG 0.467361 7_2:+68742776 None:intergenic
GCCACGGATACAGAGACATT+TGG 0.467926 7_2:+68738720 None:intergenic
TAAGACTCTTGATTTGATCA+AGG 0.473829 7_2:-68741434 Msa1071920:CDS
CTTTACCAAGCGCCCAATGA+AGG 0.474796 7_2:-68739759 Msa1071920:CDS
ATTGCTGATCTTAAGGCAGC+TGG 0.475107 7_2:-68741676 Msa1071920:CDS
ACCACCAGTCCATCCATACC+TGG 0.475259 7_2:+68742708 None:intergenic
ATCCTCCCAACCACCACCAT+TGG 0.476001 7_2:-68740404 Msa1071920:CDS
TAATGCCACCGTCCCTGCTA+TGG 0.476367 7_2:-68742647 Msa1071920:CDS
ATGAATGATGTCGTTGAAGT+TGG 0.478731 7_2:+68739241 None:intergenic
AAAGGATTTGTCAACTCCCT+TGG 0.479781 7_2:+68741841 None:intergenic
TGTAGAAATAAACTTATAAG+AGG 0.480421 7_2:-68738489 Msa1071920:intron
TGCAGAACTTGCAGAGAAGA+TGG 0.480429 7_2:+68740667 None:intergenic
TATGGTGCTGGAATTGGCCC+TGG 0.480835 7_2:-68739128 Msa1071920:CDS
TCACCTCGGGACCCAATTCT+GGG 0.481128 7_2:+68742478 None:intergenic
ATCAGCATCCATATCAATGA+TGG 0.484383 7_2:+68739217 None:intergenic
AACGAGCTTGCCAAGTGAAA+AGG 0.486521 7_2:-68738918 Msa1071920:exon
TCTCCTATCTTTGCTTCCCA+AGG 0.486549 7_2:-68741816 Msa1071920:CDS
GCAACCATGTTGAGGAGGGC+AGG 0.486565 7_2:+68738960 None:intergenic
ACAGCCTCGTTAGTCACTCT+TGG 0.488254 7_2:+68740620 None:intergenic
ACTTGTGAGCTTCAAGATCC+AGG 0.488502 7_2:+68741617 None:intergenic
CAAGGCTGTTGAAGAATACA+AGG 0.493097 7_2:-68742436 Msa1071920:CDS
GAAGGAGTTGTTTATGGTGC+TGG 0.493441 7_2:-68739140 Msa1071920:CDS
TGCCTTAATGTACTCTTCCT+CGG 0.493586 7_2:+68740238 None:intergenic
TTGGTGGGATTCTTGGGGAG+TGG 0.493782 7_2:+68739093 None:intergenic
GTCCAAGTAGTGAGCGTGCT+CGG 0.494016 7_2:+68739424 None:intergenic
AATGATCCAATGGTGGTGGT+TGG 0.497627 7_2:+68740398 None:intergenic
CTCACATCACCATAGATGAT+TGG 0.497831 7_2:+68739827 None:intergenic
CTTTATACCTTAAAATACTA+GGG 0.498163 7_2:-68738612 Msa1071920:three_prime_UTR
AATACCTTTGCCCACAATGC+CGG 0.498196 7_2:+68741309 None:intergenic
GTGAAGAAGTGAGCAGGAAG+TGG 0.504910 7_2:+68741184 None:intergenic
TTAAACTTCTTACTTGTAGA+CGG 0.506307 7_2:+68741787 None:intergenic
AATGGATGGGTGCAATCCTA+TGG 0.506434 7_2:-68739869 Msa1071920:CDS
TAGTAAGTAAAAGTGTTGCT+TGG 0.508330 7_2:+68742775 None:intergenic
AGTACATTAGAGGCTCTTGC+CGG 0.509775 7_2:-68741328 Msa1071920:CDS
CACTTGGTCATCTCCATAGC+AGG 0.511355 7_2:+68742634 None:intergenic
GGATTTGTCAACTCCCTTGG+CGG 0.513440 7_2:+68741844 None:intergenic
TGCAATATCAATAAAGATTG+TGG 0.516704 7_2:+68738693 None:intergenic
CTAGTTGGTGTCGAACCACT+TGG 0.518118 7_2:+68742618 None:intergenic
AGCCAAAGCAATCTGGTAGC+AGG 0.519856 7_2:+68739541 None:intergenic
TTGCCAAGTGAAAAGGTTGA+AGG 0.520263 7_2:-68738911 Msa1071920:exon
GACCTTGAGAAAGGTGGTAT+TGG 0.521585 7_2:-68739500 Msa1071920:CDS
AGCAGTGTGAAGAAGTGAGC+AGG 0.525551 7_2:+68741178 None:intergenic
TCGGCGATCTCGTCAGTTGG+TGG 0.525621 7_2:+68739077 None:intergenic
CCGTTCCACCCAGGTATGGA+TGG 0.526113 7_2:-68742717 Msa1071920:CDS
GGGTGGAACGGCGCCGAGAG+TGG 0.527072 7_2:+68742729 None:intergenic
GACCAGTTGAGAATGGTGAC+AGG 0.532128 7_2:+68739722 None:intergenic
AGTTGTTGAAGTAAATGCAT+TGG 0.532315 7_2:-68741087 Msa1071920:CDS
GACCTGCTACCAGATTGCTT+TGG 0.533114 7_2:-68739543 Msa1071920:CDS
CTCCTTAGTTCCACGGTCTG+GGG 0.533778 7_2:+68740374 None:intergenic
GATGAGGCTGCTTTGAGAGA+GGG 0.534990 7_2:-68739464 Msa1071920:CDS
GTTTCACGCCATGGTTTCCA+AGG 0.535227 7_2:-68738585 Msa1071920:three_prime_UTR
TTTCAGGCTGCTGCATTGAA+GGG 0.536663 7_2:-68740497 Msa1071920:intron
TATGGATTTGATTTAGTCCG+TGG 0.537748 7_2:-68741460 Msa1071920:CDS
GGAAACAGATGTCTGATGTT+GGG 0.538478 7_2:-68742810 Msa1071920:CDS
TCCAAATGTCTCTGTATCCG+TGG 0.540894 7_2:-68738721 Msa1071920:three_prime_UTR
GTTGCTCTCCAAAGCCGCCA+AGG 0.542973 7_2:-68741858 Msa1071920:CDS
AGGGTCTTGTATGCCTCAGC+GGG 0.543065 7_2:+68741508 None:intergenic
TGAAACAGGGCCAACAAGAA+CGG 0.543972 7_2:+68741886 None:intergenic
ACATGGAGACCTTCAAAAGA+AGG 0.544230 7_2:+68741559 None:intergenic
AACGAAGGACCAGTTGAGAA+TGG 0.550417 7_2:+68739715 None:intergenic
CGGCGATCTCGTCAGTTGGT+GGG 0.551989 7_2:+68739078 None:intergenic
GGGGAATGATCCAATGGTGG+TGG 0.552050 7_2:+68740394 None:intergenic
CTCACTTCTTCACACTGCTG+TGG 0.553458 7_2:-68741174 Msa1071920:CDS
TTGTCACATCGTGGTTTGCA+AGG 0.553611 7_2:-68738559 Msa1071920:three_prime_UTR
CCCACAAAACGTTCTTCTCA+AGG 0.553901 7_2:+68739030 None:intergenic
TGGAAACAGATGTCTGATGT+TGG 0.553919 7_2:-68742811 Msa1071920:CDS
TCGTTAGAGTTGACCAGCCT+AGG 0.554706 7_2:-68739697 Msa1071920:intron
TGTGGGTCAACCCTGACTGT+GGG 0.554903 7_2:-68739013 Msa1071920:CDS
TTGTGGGTCAACCCTGACTG+TGG 0.555145 7_2:-68739014 Msa1071920:CDS
CATTGTTGGATACCCTCGTA+TGG 0.555284 7_2:-68742935 Msa1071920:CDS
GACTAACGAGGCTGTTCAGA+AGG 0.555699 7_2:-68740612 Msa1071920:CDS
CCACCCAGGTATGGATGGAC+TGG 0.557087 7_2:-68742712 Msa1071920:CDS
TTGCTGGAGTCGTTGATGGA+AGG 0.557997 7_2:-68741384 Msa1071920:CDS
CTTGCCGGCATTGTGGGCAA+AGG 0.558431 7_2:-68741313 Msa1071920:intron
TTGCTCTCCAAAGCCGCCAA+GGG 0.567535 7_2:-68741857 Msa1071920:CDS
TGCAGCAACCATGTTGAGGA+GGG 0.567910 7_2:+68738956 None:intergenic
GTGCTACTAATGTCAGTGCC+AGG 0.568192 7_2:-68740460 Msa1071920:CDS
GAAGTTGAAGACCTTGAGAA+AGG 0.568559 7_2:-68739509 Msa1071920:CDS
ACCTTTCGGTGTTAGTGTAG+AGG 0.570135 7_2:+68743654 None:intergenic
AGGCTGGTCAACTCTAACGA+AGG 0.572648 7_2:+68739700 None:intergenic
CTGTCGGCGATCTCGTCAGT+TGG 0.575748 7_2:+68739074 None:intergenic
GAGTACACAAAGTTCACCTC+GGG 0.576283 7_2:+68742465 None:intergenic
TAGGGCATAGTTTCACGCCA+TGG 0.577684 7_2:-68738594 Msa1071920:three_prime_UTR
ACATCACCATAGATGATTGG+TGG 0.578253 7_2:+68739830 None:intergenic
AGAAACCTTCTTCAAATCCT+CGG 0.579553 7_2:+68742855 None:intergenic
TCTTGTTAACGAGACCAAGT+TGG 0.581310 7_2:-68741150 Msa1071920:CDS
CTCTCGGCGCCGTTCCACCC+AGG 0.582006 7_2:-68742726 Msa1071920:CDS
TCTCTCTTGGGTCCCATACG+AGG 0.582372 7_2:+68742922 None:intergenic
CATCTGGGCAAATGATCTTG+AGG 0.583442 7_2:-68741359 Msa1071920:CDS
ATCAGACATCTGTTTCCAGA+TGG 0.583712 7_2:+68742816 None:intergenic
TCCTTAGTTCCACGGTCTGG+GGG 0.584719 7_2:+68740375 None:intergenic
TTTGCAAGGATATTGTTGAA+AGG 0.585081 7_2:-68738545 Msa1071920:three_prime_UTR
GTCAGTTGGTGGGATTCTTG+GGG 0.585834 7_2:+68739088 None:intergenic
CTGCAGCAACCATGTTGAGG+AGG 0.586019 7_2:+68738955 None:intergenic
GCACGCTCACTACTTGGACT+GGG 0.587006 7_2:-68739420 Msa1071920:CDS
AATCAAGAGTCTTAGTTCCA+CGG 0.587307 7_2:+68741443 None:intergenic
TGATGAGGCTGCTTTGAGAG+AGG 0.587396 7_2:-68739465 Msa1071920:CDS
CCATCCATACCTGGGTGGAA+CGG 0.587440 7_2:+68742717 None:intergenic
AGCGGGAATATCAGCGAAGT+AGG 0.587569 7_2:+68741525 None:intergenic
CCAATTCTGGGACAATAAAG+TGG 0.587631 7_2:+68742490 None:intergenic
TTCAAGATCCAGGACAAGTG+TGG 0.587633 7_2:+68741627 None:intergenic
CTTTGTGTACTCTTCTCACA+AGG 0.588250 7_2:-68742454 Msa1071920:CDS
TGGAACGGCGCCGAGAGTGG+CGG 0.589325 7_2:+68742732 None:intergenic
CATTGGTGATTCTGAAGGAG+TGG 0.589827 7_2:+68739393 None:intergenic
ACTTGCAGGCAACAAGGATG+AGG 0.590756 7_2:-68741057 Msa1071920:intron
TTTACCAAGCGCCCAATGAA+GGG 0.590785 7_2:-68739758 Msa1071920:CDS
TCCTTCAGAATCACCAATGT+CGG 0.592425 7_2:-68739389 Msa1071920:CDS
GGTCGAGTTTATACCTAGGC+TGG 0.592475 7_2:+68739684 None:intergenic
CACCAATACCACCTTTCTCA+AGG 0.596575 7_2:+68739498 None:intergenic
TCCTCTACACTAACACCGAA+AGG 0.597221 7_2:-68743655 Msa1071920:intron
AAGCAAAGATAGGAGATCAA+AGG 0.597361 7_2:+68741823 None:intergenic
GGAGTCCTGAACACCGACAT+TGG 0.602532 7_2:+68739376 None:intergenic
CTTGACACAACGAGATCCAT+AGG 0.604689 7_2:+68739853 None:intergenic
ATCCAATGGTGGTGGTTGGG+AGG 0.606015 7_2:+68740402 None:intergenic
TGGATGATGAAATTAAGTCA+TGG 0.607380 7_2:-68741130 Msa1071920:CDS
TGACATTAGTAGCACGGCGA+TGG 0.607809 7_2:+68740468 None:intergenic
GCGAACCCTCCTTAGTTCCA+CGG 0.608505 7_2:+68740367 None:intergenic
TAATGCACTTGCAGGCAACA+AGG 0.608842 7_2:-68741063 Msa1071920:CDS
GAGTGGATGTCATACACACC+AGG 0.609608 7_2:+68739110 None:intergenic
CCAGACCGTGGAACTAAGGA+GGG 0.610455 7_2:-68740372 Msa1071920:CDS
CAACTGACGAGATCGCCGAC+AGG 0.610689 7_2:-68739073 Msa1071920:CDS
CTCGTTAGTCACTCTTGGAG+AGG 0.610883 7_2:+68740625 None:intergenic
TGGCTGCAGCAACCATGTTG+AGG 0.611356 7_2:+68738952 None:intergenic
CTTGATACTACCGCCACTCT+CGG 0.616148 7_2:-68742742 Msa1071920:CDS
TAAAGATTGTGGCAGAGCCA+CGG 0.616622 7_2:+68738704 None:intergenic
AGACAGTCATTGCCTTTGGG+CGG 0.616757 7_2:+68739804 None:intergenic
CGTTGATGGAAGGAACATCT+GGG 0.617267 7_2:-68741374 Msa1071920:CDS
AAGCATCTTGTTGATCCTGT+CGG 0.618740 7_2:+68739058 None:intergenic
GGTCATCTCCATAGCAGGGA+CGG 0.618946 7_2:+68742639 None:intergenic
TCAAGATCCAGGACAAGTGT+GGG 0.621194 7_2:+68741628 None:intergenic
CTCTCTTGGGTCCCATACGA+GGG 0.622388 7_2:+68742923 None:intergenic
ATTGTTGGATACCCTCGTAT+GGG 0.623364 7_2:-68742934 Msa1071920:CDS
CTTCTTACTTGTAGACGGCA+AGG 0.623727 7_2:+68741792 None:intergenic
TGTCCCAGAATTGGGTCCCG+AGG 0.624259 7_2:-68742481 Msa1071920:CDS
ACCGACATTGGTGATTCTGA+AGG 0.624679 7_2:+68739388 None:intergenic
GACTAAATCAAATCCATAAG+CGG 0.625920 7_2:+68741465 None:intergenic
GACAATATCCTTGGAAACCA+TGG 0.626077 7_2:+68738577 None:intergenic
GTACATTAAGGCAATTAAGG+AGG 0.627912 7_2:-68740228 Msa1071920:CDS
CCCAGGTATGGATGGACTGG+TGG 0.629978 7_2:-68742709 Msa1071920:CDS
AGTAGGTCTCAACAAGAACA+TGG 0.630158 7_2:+68741542 None:intergenic
CTTCTATCAGTCTTCCGTGA+AGG 0.630174 7_2:-68739158 Msa1071920:CDS
TAAGCCTGCCCTCCTCAACA+TGG 0.632365 7_2:-68738964 Msa1071920:CDS
GTTGAAGACCTTGAGAAAGG+TGG 0.637199 7_2:-68739506 Msa1071920:CDS
GACACCACTCAAAGATGTGA+GGG 0.637443 7_2:+68741489 None:intergenic
GATATTGATGTCCTAGTACA+CGG 0.639077 7_2:-68740170 Msa1071920:CDS
TGGTGATGTGAGCCGCCCAA+AGG 0.639821 7_2:-68739816 Msa1071920:CDS
CGACACCACTCAAAGATGTG+AGG 0.643850 7_2:+68741488 None:intergenic
CGGTGTTCAGGACTCCACCC+AGG 0.645289 7_2:-68739369 Msa1071920:intron
ACCAGTTGAGAATGGTGACA+GGG 0.646821 7_2:+68739723 None:intergenic
TGGAGTAGCACATGTGAGTG+TGG 0.647254 7_2:+68739261 None:intergenic
TGAAGAATACAAGGAAGCCA+AGG 0.648603 7_2:-68742427 Msa1071920:CDS
CCAAGGATATTGTCACATCG+TGG 0.649111 7_2:-68738568 Msa1071920:three_prime_UTR
CTTCGCTGATATTCCCGCTG+AGG 0.651444 7_2:-68741521 Msa1071920:CDS
TGGCACTGACATTAGTAGCA+CGG 0.651735 7_2:+68740462 None:intergenic
ATCAAGGCTGGATTTCCCAG+TGG 0.656695 7_2:-68741418 Msa1071920:CDS
GAGGGTCTTGTATGCCTCAG+CGG 0.658058 7_2:+68741507 None:intergenic
CCACCAGTCCATCCATACCT+GGG 0.661096 7_2:+68742709 None:intergenic
ACTTGGTCATCTCCATAGCA+GGG 0.665945 7_2:+68742635 None:intergenic
AGAGTACACAAAGTTCACCT+CGG 0.672545 7_2:+68742464 None:intergenic
CATCTCCATAGCAGGGACGG+TGG 0.675302 7_2:+68742642 None:intergenic
TACTAATGTCAGTGCCAGGT+TGG 0.676683 7_2:-68740456 Msa1071920:CDS
TGGTGTCATCCAAATTGATG+AGG 0.682603 7_2:-68739480 Msa1071920:CDS
GCGTGCTCGGACTTCCTCAG+TGG 0.686114 7_2:+68739437 None:intergenic
AAGACCCTCACATCTTTGAG+TGG 0.695040 7_2:-68741493 Msa1071920:CDS
CTTGAAGCTCAACAACTGAG+CGG 0.697886 7_2:+68740201 None:intergenic
AGAATACAAGGAAGCCAAGG+CGG 0.708610 7_2:-68742424 Msa1071920:intron
CTGCTATGGAGATGACCAAG+TGG 0.713786 7_2:-68742633 Msa1071920:CDS
CTCTCCAAGAGTGACTAACG+AGG 0.723815 7_2:-68740624 Msa1071920:CDS
CCAGTCCATCCATACCTGGG+TGG 0.730069 7_2:+68742712 None:intergenic
AGAGCAACAAGTATGAAACA+GGG 0.741881 7_2:+68741873 None:intergenic
AGTGGATGTCATACACACCA+GGG 0.742744 7_2:+68739111 None:intergenic
GTGAGCCAAACATACCTGGG+TGG 0.772714 7_2:+68739355 None:intergenic
TGAGAGAGGGACTACCACTG+AGG 0.777373 7_2:-68739451 Msa1071920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAAGATTATGATTAA+GGG + chr7_2:68738635-68738654 None:intergenic 10.0%
!! TTAACAAAATTAAATAAATC+CGG + chr7_2:68742126-68742145 None:intergenic 10.0%
!! TTATTAAGATTATGATTAAG+GGG + chr7_2:68738634-68738653 None:intergenic 15.0%
!! GATTATTAAGATTATGATTA+AGG + chr7_2:68738636-68738655 None:intergenic 15.0%
!!! AATATTATCAGTTTTATTAG+TGG - chr7_2:68739081-68739100 Msa1071920:CDS 15.0%
!!! ATATTATCAGTTTTATTAGT+GGG - chr7_2:68739082-68739101 Msa1071920:CDS 15.0%
!!! ATTTGATTTATACAGAAAAA+TGG - chr7_2:68739230-68739249 Msa1071920:CDS 15.0%
!!! TGACATTTTTAATTAGATTT+GGG - chr7_2:68739962-68739981 Msa1071920:intron 15.0%
!!! TAAGAAGTTTAAATTGTTTT+GGG - chr7_2:68740419-68740438 Msa1071920:CDS 15.0%
!! AATTAAGTAAATTCAAGTAT+TGG - chr7_2:68741302-68741321 Msa1071920:intron 15.0%
!!! TGTCAATAGTTTTTTTTTTT+TGG - chr7_2:68741400-68741419 Msa1071920:CDS 15.0%
!!! GTCAATAGTTTTTTTTTTTT+GGG - chr7_2:68741401-68741420 Msa1071920:CDS 15.0%
!!! TTTTTAACCTTTATGATAAA+AGG - chr7_2:68741428-68741447 Msa1071920:CDS 15.0%
!! TAACAAAATTAAATAAATCC+GGG + chr7_2:68742125-68742144 None:intergenic 15.0%
!!! GAAATTTTATTATAACATGT+AGG + chr7_2:68742902-68742921 None:intergenic 15.0%
!!! AAAAGGATAATTTTCTATTT+TGG - chr7_2:68743350-68743369 Msa1071920:intron 15.0%
!! TATTAAGATTATGATTAAGG+GGG + chr7_2:68738633-68738652 None:intergenic 20.0%
!! TTAATTAAATAGTTCACTAG+AGG + chr7_2:68739024-68739043 None:intergenic 20.0%
!!! TTATTTTTTTGTTGAAAGCT+CGG + chr7_2:68739152-68739171 None:intergenic 20.0%
!!! GTGACATTTTTAATTAGATT+TGG - chr7_2:68739961-68739980 Msa1071920:intron 20.0%
!!! GTAAGAAGTTTAAATTGTTT+TGG - chr7_2:68740418-68740437 Msa1071920:CDS 20.0%
!!! AAGAAGTTTAAATTGTTTTG+GGG - chr7_2:68740420-68740439 Msa1071920:CDS 20.0%
!! TTATTGAACATTCATTACAT+TGG - chr7_2:68740908-68740927 Msa1071920:intron 20.0%
!!! ATTTACTTCAACAACTTTTT+GGG + chr7_2:68741104-68741123 None:intergenic 20.0%
!!! ACACTTGTTAATACTATTAT+AGG + chr7_2:68741331-68741350 None:intergenic 20.0%
!!! TATAGAACCTTTTATCATAA+AGG + chr7_2:68741438-68741457 None:intergenic 20.0%
!!! TCACTTAGTTAATGTTTTTA+TGG - chr7_2:68741492-68741511 Msa1071920:CDS 20.0%
!!! TAATACTCGTTTTGTTTATT+TGG - chr7_2:68741638-68741657 Msa1071920:CDS 20.0%
!! AATAAAACAAGAGTCAATAA+AGG + chr7_2:68741929-68741948 None:intergenic 20.0%
!! CTTTATACCTTAAAATACTA+GGG - chr7_2:68743583-68743602 Msa1071920:intron 20.0%
!! TGTAGAAATAAACTTATAAG+AGG - chr7_2:68743706-68743725 Msa1071920:five_prime_UTR 20.0%
!! ATTTTCAGATTCAGATCTAA+TGG + chr7_2:68738777-68738796 None:intergenic 25.0%
! GTGTGAATTAACGAAAATTA+TGG + chr7_2:68738830-68738849 None:intergenic 25.0%
! ACGAGTAAAACTAATTGAAT+TGG + chr7_2:68738890-68738909 None:intergenic 25.0%
!!! GATTTTGTTGTTATTGTTGT+TGG - chr7_2:68739190-68739209 Msa1071920:CDS 25.0%
!!! ATTCGATACTTACTTTTCAA+TGG - chr7_2:68739518-68739537 Msa1071920:CDS 25.0%
! GCTTAATGTTTAATGTCATT+GGG - chr7_2:68739855-68739874 Msa1071920:CDS 25.0%
!!! TGACATTTTTAACTAGATCT+AGG - chr7_2:68739915-68739934 Msa1071920:CDS 25.0%
!!! ATTTTTAACTAGATCTAGGT+TGG - chr7_2:68739919-68739938 Msa1071920:CDS 25.0%
!!! TTGGTTTTTGTTGTTGTTTT+TGG - chr7_2:68740049-68740068 Msa1071920:intron 25.0%
!!! TGGTTTTTGTTGTTGTTTTT+GGG - chr7_2:68740050-68740069 Msa1071920:intron 25.0%
! TTAAACTTCTTACTTGTAGA+CGG + chr7_2:68740411-68740430 None:intergenic 25.0%
!!! AGAAGTTTAAATTGTTTTGG+GGG - chr7_2:68740421-68740440 Msa1071920:CDS 25.0%
!! CATTTACTTCAACAACTTTT+TGG + chr7_2:68741105-68741124 None:intergenic 25.0%
! AATTATGTGGTGAAATAAAC+AGG + chr7_2:68741473-68741492 None:intergenic 25.0%
! CATTAACTAAGTGAATTATG+TGG + chr7_2:68741486-68741505 None:intergenic 25.0%
!! GTTTTTATGGTTTCATTTTC+AGG - chr7_2:68741505-68741524 Msa1071920:CDS 25.0%
!!! TATTGACTCTTGTTTTATTC+AGG - chr7_2:68741930-68741949 Msa1071920:intron 25.0%
!! AATTAGTTGGAAGTACAATT+GGG + chr7_2:68742226-68742245 None:intergenic 25.0%
! CAGCATTCATATCATATATT+TGG - chr7_2:68742590-68742609 Msa1071920:intron 25.0%
!! ATCTGTTTGATTTACACAAA+AGG - chr7_2:68743333-68743352 Msa1071920:intron 25.0%
! AATAACTGTGTGCAATATTT+AGG - chr7_2:68743380-68743399 Msa1071920:intron 25.0%
! ATTTGGAAAAACAGAAAAGT+GGG + chr7_2:68743461-68743480 None:intergenic 25.0%
! TGCAATATCAATAAAGATTG+TGG + chr7_2:68743505-68743524 None:intergenic 25.0%
!! CAATTCACTATTTTCAAATG+CGG - chr7_2:68743560-68743579 Msa1071920:intron 25.0%
! GCTTTATACCTTAAAATACT+AGG - chr7_2:68743582-68743601 Msa1071920:intron 25.0%
! CTAATTGAATTGGAGTTGAT+TGG + chr7_2:68738880-68738899 None:intergenic 30.0%
TGTGAATTTAACGAACATGA+AGG + chr7_2:68738948-68738967 None:intergenic 30.0%
! TTCAAGATCGAGTACATTTT+AGG - chr7_2:68738975-68738994 Msa1071920:CDS 30.0%
AATAGTTCACTAGAGGATTA+AGG + chr7_2:68739017-68739036 None:intergenic 30.0%
!! AATTTGCTTTGGAATCATTC+TGG - chr7_2:68739301-68739320 Msa1071920:intron 30.0%
!! ATTTGCTTTGGAATCATTCT+GGG - chr7_2:68739302-68739321 Msa1071920:intron 30.0%
!! AGTAAGTAAAAGTGTTGCTT+GGG + chr7_2:68739422-68739441 None:intergenic 30.0%
!! TAGTAAGTAAAAGTGTTGCT+TGG + chr7_2:68739423-68739442 None:intergenic 30.0%
ATGACATTAAACATTAAGCC+AGG + chr7_2:68739854-68739873 None:intergenic 30.0%
GGCTTAATGTTTAATGTCAT+TGG - chr7_2:68739854-68739873 Msa1071920:CDS 30.0%
!! CTAGGTTGGAGTTTTTAATT+AGG - chr7_2:68739933-68739952 Msa1071920:intron 30.0%
!! GTTGGAGTTTTTAATTAGGA+GGG - chr7_2:68739937-68739956 Msa1071920:intron 30.0%
!!! GATTGTTAGTTTGTCCTTTT+TGG - chr7_2:68740117-68740136 Msa1071920:intron 30.0%
!!! TTAGTTTGTCCTTTTTGGTA+TGG - chr7_2:68740122-68740141 Msa1071920:intron 30.0%
TAACAAGAACCATACCAAAA+AGG + chr7_2:68740134-68740153 None:intergenic 30.0%
!!! TTTTGATTTGTCTTACAGCT+TGG - chr7_2:68740272-68740291 Msa1071920:intron 30.0%
!! TTGCTTTTAACTACTAATGC+AGG - chr7_2:68740490-68740509 Msa1071920:CDS 30.0%
!! TGCTTTTAACTACTAATGCA+GGG - chr7_2:68740491-68740510 Msa1071920:CDS 30.0%
GACTAAATCAAATCCATAAG+CGG + chr7_2:68740733-68740752 None:intergenic 30.0%
! TAAGACTCTTGATTTGATCA+AGG - chr7_2:68740761-68740780 Msa1071920:intron 30.0%
CTTAATTTCATCATCCAACT+TGG + chr7_2:68741062-68741081 None:intergenic 30.0%
TGGATGATGAAATTAAGTCA+TGG - chr7_2:68741065-68741084 Msa1071920:CDS 30.0%
AGTTGTTGAAGTAAATGCAT+TGG - chr7_2:68741108-68741127 Msa1071920:CDS 30.0%
GTGAGATGAAATGAAAGAAA+TGG + chr7_2:68741170-68741189 None:intergenic 30.0%
AAAACGAGTATTAGAACAGA+GGG + chr7_2:68741631-68741650 None:intergenic 30.0%
!!! GTTTTGTTTATTTGGATCTG+TGG - chr7_2:68741646-68741665 Msa1071920:CDS 30.0%
GACACAATGTCAAATAAACA+AGG + chr7_2:68741904-68741923 None:intergenic 30.0%
TGCTTCAATTGACTAAAAGA+AGG + chr7_2:68742085-68742104 None:intergenic 30.0%
!! AAAGATAGCTTTATTACACC+CGG - chr7_2:68742104-68742123 Msa1071920:intron 30.0%
! AACATCAAGGGCATAAAATA+TGG + chr7_2:68742191-68742210 None:intergenic 30.0%
! CAATTAGTTGGAAGTACAAT+TGG + chr7_2:68742227-68742246 None:intergenic 30.0%
ATTGTACTTCCAACTAATTG+TGG - chr7_2:68742227-68742246 Msa1071920:intron 30.0%
ATTCCTCTGCATAAAAAAAG+AGG + chr7_2:68742255-68742274 None:intergenic 30.0%
! TTTTATGCAGAGGAATGATA+TGG - chr7_2:68742259-68742278 Msa1071920:intron 30.0%
AATGATATGGTTGAGTACTT+TGG - chr7_2:68742272-68742291 Msa1071920:intron 30.0%
CATTCATTCCATCATTGATA+TGG - chr7_2:68742970-68742989 Msa1071920:intron 30.0%
!! TAAAATGAAATTTTGGGAGG+GGG + chr7_2:68743437-68743456 None:intergenic 30.0%
!! GTAAAATGAAATTTTGGGAG+GGG + chr7_2:68743438-68743457 None:intergenic 30.0%
!! GGTAAAATGAAATTTTGGGA+GGG + chr7_2:68743439-68743458 None:intergenic 30.0%
! GTGGGGTAAAATGAAATTTT+GGG + chr7_2:68743443-68743462 None:intergenic 30.0%
! AGTGGGGTAAAATGAAATTT+TGG + chr7_2:68743444-68743463 None:intergenic 30.0%
TTTGGAAAAACAGAAAAGTG+GGG + chr7_2:68743460-68743479 None:intergenic 30.0%
CATTTGGAAAAACAGAAAAG+TGG + chr7_2:68743462-68743481 None:intergenic 30.0%
CATGATTATTTGCACAAAAC+TGG + chr7_2:68743533-68743552 None:intergenic 30.0%
! AACTATGCCCTAGTATTTTA+AGG + chr7_2:68743593-68743612 None:intergenic 30.0%
TTTGCAAGGATATTGTTGAA+AGG - chr7_2:68743650-68743669 Msa1071920:intron 30.0%
ATCTTCTTCGCTTCTTGTTA+AGG + chr7_2:68738502-68738521 None:intergenic 35.0%
AAGATTATGATTAAGGGGGA+AGG + chr7_2:68738629-68738648 None:intergenic 35.0%
AGTGTTCTTGTTAGGTTTAG+CGG + chr7_2:68738721-68738740 None:intergenic 35.0%
!! GAACTAAGAGTGTTCTTGTT+AGG + chr7_2:68738729-68738748 None:intergenic 35.0%
!! GGAGTATGGATTAGTGATTA+AGG + chr7_2:68738859-68738878 None:intergenic 35.0%
! AATTGGAGTTGATTGGAGTA+TGG + chr7_2:68738873-68738892 None:intergenic 35.0%
GGATTAAGGAATAAGCAACT+AGG + chr7_2:68739003-68739022 None:intergenic 35.0%
AAAATGGCTTCTCACATTGT+TGG - chr7_2:68739246-68739265 Msa1071920:CDS 35.0%
GCAAATTTCAACTCTCTCTT+GGG + chr7_2:68739288-68739307 None:intergenic 35.0%
AGCAAATTTCAACTCTCTCT+TGG + chr7_2:68739289-68739308 None:intergenic 35.0%
! GAGAGAGTTGAAATTTGCTT+TGG - chr7_2:68739290-68739309 Msa1071920:intron 35.0%
AGAAACCTTCTTCAAATCCT+CGG + chr7_2:68739343-68739362 None:intergenic 35.0%
!! ACTTACTTTTCAATGGCTAG+AGG - chr7_2:68739525-68739544 Msa1071920:CDS 35.0%
TTTGATGAGTTTGTGACTCT+GGG - chr7_2:68739633-68739652 Msa1071920:intron 35.0%
CACTTTATTGTCCCAGAATT+GGG - chr7_2:68739706-68739725 Msa1071920:CDS 35.0%
!!! CGTTTTGTTTTTGCTTATGC+AGG - chr7_2:68739807-68739826 Msa1071920:CDS 35.0%
!! AAATGTTAGCTTTGTTAGCC+TGG - chr7_2:68739833-68739852 Msa1071920:CDS 35.0%
!! ATGTCATTGGGAAGTATTGT+TGG - chr7_2:68739867-68739886 Msa1071920:CDS 35.0%
!! TGTCATTGGGAAGTATTGTT+GGG - chr7_2:68739868-68739887 Msa1071920:CDS 35.0%
!! GGTTGGAGTTTTTAATTAGG+AGG - chr7_2:68739936-68739955 Msa1071920:intron 35.0%
TAGCTTCACTTAGTGGAATA+AGG - chr7_2:68740025-68740044 Msa1071920:intron 35.0%
GAGTTTGAAAGATCTTTGGT+TGG - chr7_2:68740074-68740093 Msa1071920:intron 35.0%
TTTGAAAGATCTTTGGTTGG+TGG - chr7_2:68740077-68740096 Msa1071920:intron 35.0%
TTGAAAGATCTTTGGTTGGT+GGG - chr7_2:68740078-68740097 Msa1071920:intron 35.0%
TCTACTATAATAGACCACAC+AGG + chr7_2:68740204-68740223 None:intergenic 35.0%
AGAGCAACAAGTATGAAACA+GGG + chr7_2:68740325-68740344 None:intergenic 35.0%
AAGCAAAGATAGGAGATCAA+AGG + chr7_2:68740375-68740394 None:intergenic 35.0%
!! TTTTAACTACTAATGCAGGG+AGG - chr7_2:68740494-68740513 Msa1071920:CDS 35.0%
! TATGGATTTGATTTAGTCCG+TGG - chr7_2:68740735-68740754 Msa1071920:intron 35.0%
AATCAAGAGTCTTAGTTCCA+CGG + chr7_2:68740755-68740774 None:intergenic 35.0%
ACGTTTACTTCAAAGACTCT+TGG + chr7_2:68740939-68740958 None:intergenic 35.0%
CAAAACGAGTATTAGAACAG+AGG + chr7_2:68741632-68741651 None:intergenic 35.0%
ACCCTTTCTATTCAACTTTC+AGG - chr7_2:68741682-68741701 Msa1071920:CDS 35.0%
GCCTGAAAGTTGAATAGAAA+GGG + chr7_2:68741686-68741705 None:intergenic 35.0%
AGCCTGAAAGTTGAATAGAA+AGG + chr7_2:68741687-68741706 None:intergenic 35.0%
!! ACTTCTTAGCCTTGAATTCA+CGG + chr7_2:68741853-68741872 None:intergenic 35.0%
GATATTGATGTCCTAGTACA+CGG - chr7_2:68742025-68742044 Msa1071920:intron 35.0%
GTTTCTCTTCAAAACAGAAG+AGG + chr7_2:68742160-68742179 None:intergenic 35.0%
AATCGGCAATCTAACATCAA+GGG + chr7_2:68742203-68742222 None:intergenic 35.0%
! TTGGAAGTACAATTGGGAAT+CGG + chr7_2:68742220-68742239 None:intergenic 35.0%
AAAGAGGATCCACAATTAGT+TGG + chr7_2:68742239-68742258 None:intergenic 35.0%
!!! GATCCTCTTTTTTTATGCAG+AGG - chr7_2:68742249-68742268 Msa1071920:intron 35.0%
! TTTTCCTGTGATGTTACAAG+GGG + chr7_2:68742538-68742557 None:intergenic 35.0%
! CTTTTCCTGTGATGTTACAA+GGG + chr7_2:68742539-68742558 None:intergenic 35.0%
! ACTTTTCCTGTGATGTTACA+AGG + chr7_2:68742540-68742559 None:intergenic 35.0%
AACATGTAGGCAAATAGAGA+AGG + chr7_2:68742889-68742908 None:intergenic 35.0%
ATGAATGATGTCGTTGAAGT+TGG + chr7_2:68742957-68742976 None:intergenic 35.0%
ATCAGCATCCATATCAATGA+TGG + chr7_2:68742981-68743000 None:intergenic 35.0%
! TTTCCTTCAACCTTTTCACT+TGG + chr7_2:68743290-68743309 None:intergenic 35.0%
!! AAAATGAAATTTTGGGAGGG+GGG + chr7_2:68743436-68743455 None:intergenic 35.0%
! GGGTAAAATGAAATTTTGGG+AGG + chr7_2:68743440-68743459 None:intergenic 35.0%
AGAGTCTCATACGAACCTTT+CGG + chr7_2:68738558-68738577 None:intergenic 40.0%
AAAGGGAAGGACGTAAAAGA+GGG + chr7_2:68738590-68738609 None:intergenic 40.0%
AAAAGGGAAGGACGTAAAAG+AGG + chr7_2:68738591-68738610 None:intergenic 40.0%
GAAAATGGGTAGACGGAAAA+GGG + chr7_2:68738607-68738626 None:intergenic 40.0%
GATTAAGGGGGAAGGAAAAT+GGG + chr7_2:68738621-68738640 None:intergenic 40.0%
TGATTAAGGGGGAAGGAAAA+TGG + chr7_2:68738622-68738641 None:intergenic 40.0%
ATTGTTGGATACCCTCGTAT+GGG - chr7_2:68739261-68739280 Msa1071920:CDS 40.0%
ATCAGACATCTGTTTCCAGA+TGG + chr7_2:68739382-68739401 None:intergenic 40.0%
TGGAAACAGATGTCTGATGT+TGG - chr7_2:68739384-68739403 Msa1071920:CDS 40.0%
GGAAACAGATGTCTGATGTT+GGG - chr7_2:68739385-68739404 Msa1071920:CDS 40.0%
GTTTGATGAGTTTGTGACTC+TGG - chr7_2:68739632-68739651 Msa1071920:intron 40.0%
!! CCAATTCTGGGACAATAAAG+TGG + chr7_2:68739708-68739727 None:intergenic 40.0%
CCACTTTATTGTCCCAGAAT+TGG - chr7_2:68739705-68739724 Msa1071920:CDS 40.0%
AGAGTACACAAAGTTCACCT+CGG + chr7_2:68739734-68739753 None:intergenic 40.0%
CTTTGTGTACTCTTCTCACA+AGG - chr7_2:68739741-68739760 Msa1071920:CDS 40.0%
CAAGGCTGTTGAAGAATACA+AGG - chr7_2:68739759-68739778 Msa1071920:CDS 40.0%
TGAAGAATACAAGGAAGCCA+AGG - chr7_2:68739768-68739787 Msa1071920:CDS 40.0%
GAAAAAAACACATACCGCCT+TGG + chr7_2:68739788-68739807 None:intergenic 40.0%
GGGATCGAGTTTGAACATTA+TGG - chr7_2:68739982-68740001 Msa1071920:intron 40.0%
ACTAAGTGAAGCTAGCTACA+TGG + chr7_2:68740019-68740038 None:intergenic 40.0%
! ATGTAGCTAGCTTCACTTAG+TGG - chr7_2:68740018-68740037 Msa1071920:intron 40.0%
TCACTTAGTGGAATAAGGCT+TGG - chr7_2:68740030-68740049 Msa1071920:intron 40.0%
GGGTGAGTTTGAAAGATCTT+TGG - chr7_2:68740070-68740089 Msa1071920:intron 40.0%
TTCTGTTATGTTCACCTGTG+TGG - chr7_2:68740187-68740206 Msa1071920:CDS 40.0%
GAGAGCAACAAGTATGAAAC+AGG + chr7_2:68740326-68740345 None:intergenic 40.0%
AAAGGATTTGTCAACTCCCT+TGG + chr7_2:68740357-68740376 None:intergenic 40.0%
GGAGGTTATTGCTGATCTTA+AGG - chr7_2:68740512-68740531 Msa1071920:intron 40.0%
! GCACTTACACCTTCTTTTGA+AGG - chr7_2:68740627-68740646 Msa1071920:CDS 40.0%
ACATGGAGACCTTCAAAAGA+AGG + chr7_2:68740639-68740658 None:intergenic 40.0%
AGTAGGTCTCAACAAGAACA+TGG + chr7_2:68740656-68740675 None:intergenic 40.0%
! ACTCTTGATTTGATCAAGGC+TGG - chr7_2:68740765-68740784 Msa1071920:intron 40.0%
! GCAAAGATCCATTTTCCACT+GGG + chr7_2:68740795-68740814 None:intergenic 40.0%
! AGCAAAGATCCATTTTCCAC+TGG + chr7_2:68740796-68740815 None:intergenic 40.0%
AGTGGAAAATGGATCTTTGC+TGG - chr7_2:68740795-68740814 Msa1071920:intron 40.0%
TCTTGTTAACGAGACCAAGT+TGG - chr7_2:68741045-68741064 Msa1071920:intron 40.0%
TTTCTTAGCTGCAGACATTG+TGG - chr7_2:68741227-68741246 Msa1071920:intron 40.0%
CATCAGACAATTGTTAGCAG+TGG - chr7_2:68741360-68741379 Msa1071920:CDS 40.0%
!! TGTTTTATTCAGGATCTCCG+AGG - chr7_2:68741940-68741959 Msa1071920:intron 40.0%
AGATGATTAAAGCTGACCTC+GGG + chr7_2:68742055-68742074 None:intergenic 40.0%
GAGATGATTAAAGCTGACCT+CGG + chr7_2:68742056-68742075 None:intergenic 40.0%
TCTCTTCAAAACAGAAGAGG+CGG + chr7_2:68742157-68742176 None:intergenic 40.0%
GAATCGGCAATCTAACATCA+AGG + chr7_2:68742204-68742223 None:intergenic 40.0%
ACATCACCATAGATGATTGG+TGG + chr7_2:68742368-68742387 None:intergenic 40.0%
CTCACATCACCATAGATGAT+TGG + chr7_2:68742371-68742390 None:intergenic 40.0%
AGAAGACAGTCATTGCCTTT+GGG + chr7_2:68742397-68742416 None:intergenic 40.0%
CAGTAAGCATTCCCTTCATT+GGG + chr7_2:68742451-68742470 None:intergenic 40.0%
TTTCCTGTGATGTTACAAGG+GGG + chr7_2:68742537-68742556 None:intergenic 40.0%
CCTTAATAGCCAAAGCAATC+TGG + chr7_2:68742664-68742683 None:intergenic 40.0%
CCAGATTGCTTTGGCTATTA+AGG - chr7_2:68742661-68742680 Msa1071920:CDS 40.0%
GAAGTTGAAGACCTTGAGAA+AGG - chr7_2:68742686-68742705 Msa1071920:CDS 40.0%
!! TGGTGTCATCCAAATTGATG+AGG - chr7_2:68742715-68742734 Msa1071920:CDS 40.0%
TCAAAGCAGCCTCATCAATT+TGG + chr7_2:68742727-68742746 None:intergenic 40.0%
TCCTTCAGAATCACCAATGT+CGG - chr7_2:68742806-68742825 Msa1071920:CDS 40.0%
! ATAGAAGCTTTTCGTCGGAA+CGG + chr7_2:68743024-68743043 None:intergenic 40.0%
! GACTGATAGAAGCTTTTCGT+CGG + chr7_2:68743029-68743048 None:intergenic 40.0%
TTCCGTGAAGGAGTTGTTTA+TGG - chr7_2:68743049-68743068 Msa1071920:intron 40.0%
CACCATAAACAACTCCTTCA+CGG + chr7_2:68743054-68743073 None:intergenic 40.0%
! GTTGTTTATGGTGCTGGAAT+TGG - chr7_2:68743061-68743080 Msa1071920:intron 40.0%
AAGCATCTTGTTGATCCTGT+CGG + chr7_2:68743140-68743159 None:intergenic 40.0%
! TCCTTGAGAAGAACGTTTTG+TGG - chr7_2:68743164-68743183 Msa1071920:intron 40.0%
! CCTTGAGAAGAACGTTTTGT+GGG - chr7_2:68743165-68743184 Msa1071920:intron 40.0%
AAAAACCCGTAAGTACACAG+AGG - chr7_2:68743207-68743226 Msa1071920:intron 40.0%
CTTAACCTCTGTGTACTTAC+GGG + chr7_2:68743215-68743234 None:intergenic 40.0%
GCTTAACCTCTGTGTACTTA+CGG + chr7_2:68743216-68743235 None:intergenic 40.0%
! AAGCTCGTTACGGATTTGTT+TGG + chr7_2:68743266-68743285 None:intergenic 40.0%
TTGCCAAGTGAAAAGGTTGA+AGG - chr7_2:68743284-68743303 Msa1071920:intron 40.0%
!! AAATGAAATTTTGGGAGGGG+GGG + chr7_2:68743435-68743454 None:intergenic 40.0%
GACAATATCCTTGGAAACCA+TGG + chr7_2:68743621-68743640 None:intergenic 40.0%
TCCTCTACACTAACACCGAA+AGG - chr7_2:68738540-68738559 Msa1071920:three_prime_UTR 45.0%
!! ACCTTTCGGTGTTAGTGTAG+AGG + chr7_2:68738544-68738563 None:intergenic 45.0%
GGAAAATGGGTAGACGGAAA+AGG + chr7_2:68738608-68738627 None:intergenic 45.0%
GTTCTTGTTAGGTTTAGCGG+TGG + chr7_2:68738718-68738737 None:intergenic 45.0%
TCGCGATCCACTAGATTAGT+CGG - chr7_2:68739111-68739130 Msa1071920:CDS 45.0%
AAGCTCGGTATCAGACCTAA+GGG + chr7_2:68739137-68739156 None:intergenic 45.0%
AAAGCTCGGTATCAGACCTA+AGG + chr7_2:68739138-68739157 None:intergenic 45.0%
CATTGTTGGATACCCTCGTA+TGG - chr7_2:68739260-68739279 Msa1071920:CDS 45.0%
!! CTGATCTAAGAGCATCCATC+TGG - chr7_2:68739364-68739383 Msa1071920:intron 45.0%
ACTTGGTCATCTCCATAGCA+GGG + chr7_2:68739563-68739582 None:intergenic 45.0%
CATCGCAGTCACTTACTAGT+TGG + chr7_2:68739595-68739614 None:intergenic 45.0%
! GACTCTGGGTTGTATTGATC+TGG - chr7_2:68739647-68739666 Msa1071920:intron 45.0%
GAGTACACAAAGTTCACCTC+GGG + chr7_2:68739733-68739752 None:intergenic 45.0%
AGAATACAAGGAAGCCAAGG+CGG - chr7_2:68739771-68739790 Msa1071920:CDS 45.0%
ACTGTTGCCAAGTGAATGCT+TGG - chr7_2:68740154-68740173 Msa1071920:intron 45.0%
TACTCTGCCAAGCATTCACT+TGG + chr7_2:68740164-68740183 None:intergenic 45.0%
TGAAACAGGGCCAACAAGAA+CGG + chr7_2:68740312-68740331 None:intergenic 45.0%
TCTCCTATCTTTGCTTCCCA+AGG - chr7_2:68740379-68740398 Msa1071920:CDS 45.0%
CTTCTTACTTGTAGACGGCA+AGG + chr7_2:68740406-68740425 None:intergenic 45.0%
ATTGCTGATCTTAAGGCAGC+TGG - chr7_2:68740519-68740538 Msa1071920:intron 45.0%
TCAAGATCCAGGACAAGTGT+GGG + chr7_2:68740570-68740589 None:intergenic 45.0%
TTCAAGATCCAGGACAAGTG+TGG + chr7_2:68740571-68740590 None:intergenic 45.0%
ACTTGTGAGCTTCAAGATCC+AGG + chr7_2:68740581-68740600 None:intergenic 45.0%
AAGACCCTCACATCTTTGAG+TGG - chr7_2:68740702-68740721 Msa1071920:intron 45.0%
GACACCACTCAAAGATGTGA+GGG + chr7_2:68740709-68740728 None:intergenic 45.0%
CTGGATTTCCCAGTGGAAAA+TGG - chr7_2:68740784-68740803 Msa1071920:intron 45.0%
ATCTTTGCTGGAGTCGTTGA+TGG - chr7_2:68740807-68740826 Msa1071920:intron 45.0%
! TCGTTGATGGAAGGAACATC+TGG - chr7_2:68740820-68740839 Msa1071920:intron 45.0%
! CGTTGATGGAAGGAACATCT+GGG - chr7_2:68740821-68740840 Msa1071920:intron 45.0%
CATCTGGGCAAATGATCTTG+AGG - chr7_2:68740836-68740855 Msa1071920:intron 45.0%
GGCTTCTCTCAGTACATTAG+AGG - chr7_2:68740857-68740876 Msa1071920:intron 45.0%
AGTACATTAGAGGCTCTTGC+CGG - chr7_2:68740867-68740886 Msa1071920:intron 45.0%
AATACCTTTGCCCACAATGC+CGG + chr7_2:68740889-68740908 None:intergenic 45.0%
TAATGCACTTGCAGGCAACA+AGG - chr7_2:68741132-68741151 Msa1071920:CDS 45.0%
TGCAGAACTTGCAGAGAAGA+TGG + chr7_2:68741531-68741550 None:intergenic 45.0%
TTTCAGGCTGCTGCATTGAA+GGG - chr7_2:68741698-68741717 Msa1071920:intron 45.0%
!! TGGCACTGACATTAGTAGCA+CGG + chr7_2:68741736-68741755 None:intergenic 45.0%
TACTAATGTCAGTGCCAGGT+TGG - chr7_2:68741739-68741758 Msa1071920:intron 45.0%
! CTTTTGTTGAGCATCCAACC+TGG + chr7_2:68741756-68741775 None:intergenic 45.0%
!! ATGATCCAATGGTGGTGGTT+GGG + chr7_2:68741799-68741818 None:intergenic 45.0%
!! AATGATCCAATGGTGGTGGT+TGG + chr7_2:68741800-68741819 None:intergenic 45.0%
CTTGAAGCTCAACAACTGAG+CGG + chr7_2:68741997-68742016 None:intergenic 45.0%
TCGCCTTTACTGCTAATGGA+TGG - chr7_2:68742312-68742331 Msa1071920:intron 45.0%
! CGCCTTTACTGCTAATGGAT+GGG - chr7_2:68742313-68742332 Msa1071920:intron 45.0%
CACCCATCCATTAGCAGTAA+AGG + chr7_2:68742318-68742337 None:intergenic 45.0%
AATGGATGGGTGCAATCCTA+TGG - chr7_2:68742326-68742345 Msa1071920:intron 45.0%
CTTGACACAACGAGATCCAT+AGG + chr7_2:68742345-68742364 None:intergenic 45.0%
GTCAAGCCACCAATCATCTA+TGG - chr7_2:68742359-68742378 Msa1071920:intron 45.0%
CAGAAGACAGTCATTGCCTT+TGG + chr7_2:68742398-68742417 None:intergenic 45.0%
CAAAGGCAATGACTGTCTTC+TGG - chr7_2:68742396-68742415 Msa1071920:intron 45.0%
TTTACCAAGCGCCCAATGAA+GGG - chr7_2:68742437-68742456 Msa1071920:CDS 45.0%
CCAGTAAGCATTCCCTTCAT+TGG + chr7_2:68742452-68742471 None:intergenic 45.0%
CCAATGAAGGGAATGCTTAC+TGG - chr7_2:68742449-68742468 Msa1071920:CDS 45.0%
ACCAGTTGAGAATGGTGACA+GGG + chr7_2:68742475-68742494 None:intergenic 45.0%
AACGAAGGACCAGTTGAGAA+TGG + chr7_2:68742483-68742502 None:intergenic 45.0%
TTCCTGTGATGTTACAAGGG+GGG + chr7_2:68742536-68742555 None:intergenic 45.0%
GTTGAAGACCTTGAGAAAGG+TGG - chr7_2:68742689-68742708 Msa1071920:CDS 45.0%
GACCTTGAGAAAGGTGGTAT+TGG - chr7_2:68742695-68742714 Msa1071920:CDS 45.0%
CACCAATACCACCTTTCTCA+AGG + chr7_2:68742700-68742719 None:intergenic 45.0%
! CATTGGTGATTCTGAAGGAG+TGG + chr7_2:68742805-68742824 None:intergenic 45.0%
! ACCGACATTGGTGATTCTGA+AGG + chr7_2:68742810-68742829 None:intergenic 45.0%
! AATCACCAATGTCGGTGTTC+AGG - chr7_2:68742814-68742833 Msa1071920:CDS 45.0%
CTTGTGAGCCAAACATACCT+GGG + chr7_2:68742846-68742865 None:intergenic 45.0%
ACTTGTGAGCCAAACATACC+TGG + chr7_2:68742847-68742866 None:intergenic 45.0%
! TAGAAGCTTTTCGTCGGAAC+GGG + chr7_2:68743023-68743042 None:intergenic 45.0%
CTTCTATCAGTCTTCCGTGA+AGG - chr7_2:68743037-68743056 Msa1071920:intron 45.0%
GAAGGAGTTGTTTATGGTGC+TGG - chr7_2:68743055-68743074 Msa1071920:intron 45.0%
AGTGGATGTCATACACACCA+GGG + chr7_2:68743087-68743106 None:intergenic 45.0%
CCCACAAAACGTTCTTCTCA+AGG + chr7_2:68743168-68743187 None:intergenic 45.0%
TTCACTTGGCAAGCTCGTTA+CGG + chr7_2:68743276-68743295 None:intergenic 45.0%
AACGAGCTTGCCAAGTGAAA+AGG - chr7_2:68743277-68743296 Msa1071920:intron 45.0%
TCCAAATGTCTCTGTATCCG+TGG - chr7_2:68743474-68743493 Msa1071920:intron 45.0%
TAAAGATTGTGGCAGAGCCA+CGG + chr7_2:68743494-68743513 None:intergenic 45.0%
CCACGATGTGACAATATCCT+TGG + chr7_2:68743630-68743649 None:intergenic 45.0%
CCAAGGATATTGTCACATCG+TGG - chr7_2:68743627-68743646 Msa1071920:intron 45.0%
! TTGTCACATCGTGGTTTGCA+AGG - chr7_2:68743636-68743655 Msa1071920:intron 45.0%
ATGGGTAGACGGAAAAGGGA+AGG + chr7_2:68738603-68738622 None:intergenic 50.0%
GGGGAAGGAAAATGGGTAGA+CGG + chr7_2:68738614-68738633 None:intergenic 50.0%
GTTTAGCGGTGGATCTAGAG+TGG + chr7_2:68738707-68738726 None:intergenic 50.0%
CTAAGGGCCGACTAATCTAG+TGG + chr7_2:68739121-68739140 None:intergenic 50.0%
! CACTAGATTAGTCGGCCCTT+AGG - chr7_2:68739119-68739138 Msa1071920:CDS 50.0%
! CAGTGCCGAGGATTTGAAGA+AGG - chr7_2:68739335-68739354 Msa1071920:intron 50.0%
CTTGATACTACCGCCACTCT+CGG - chr7_2:68739453-68739472 Msa1071920:CDS 50.0%
CACTTGGTCATCTCCATAGC+AGG + chr7_2:68739564-68739583 None:intergenic 50.0%
CTGCTATGGAGATGACCAAG+TGG - chr7_2:68739562-68739581 Msa1071920:intron 50.0%
!! CTAGTTGGTGTCGAACCACT+TGG + chr7_2:68739580-68739599 None:intergenic 50.0%
GACACTGTTCCCGTTCTTGT+TGG - chr7_2:68740299-68740318 Msa1071920:intron 50.0%
GAAACAGGGCCAACAAGAAC+GGG + chr7_2:68740311-68740330 None:intergenic 50.0%
GGATTTGTCAACTCCCTTGG+CGG + chr7_2:68740354-68740373 None:intergenic 50.0%
GGACCTTGGGAAGCAAAGAT+AGG + chr7_2:68740385-68740404 None:intergenic 50.0%
TTGTAGACGGCAAGGACCTT+GGG + chr7_2:68740398-68740417 None:intergenic 50.0%
TGATGAACCCACACTTGTCC+TGG - chr7_2:68740560-68740579 Msa1071920:intron 50.0%
AGCGGGAATATCAGCGAAGT+AGG + chr7_2:68740673-68740692 None:intergenic 50.0%
CGACACCACTCAAAGATGTG+AGG + chr7_2:68740710-68740729 None:intergenic 50.0%
ATCAAGGCTGGATTTCCCAG+TGG - chr7_2:68740777-68740796 Msa1071920:intron 50.0%
! TTGCTGGAGTCGTTGATGGA+AGG - chr7_2:68740811-68740830 Msa1071920:intron 50.0%
GTGAAGAAGTGAGCAGGAAG+TGG + chr7_2:68741014-68741033 None:intergenic 50.0%
AGCAGTGTGAAGAAGTGAGC+AGG + chr7_2:68741020-68741039 None:intergenic 50.0%
CTCACTTCTTCACACTGCTG+TGG - chr7_2:68741021-68741040 Msa1071920:intron 50.0%
!! GCATTGGCTAATGCACTTGC+AGG - chr7_2:68741124-68741143 Msa1071920:CDS 50.0%
ACTTGCAGGCAACAAGGATG+AGG - chr7_2:68741138-68741157 Msa1071920:CDS 50.0%
CTCGTTAGTCACTCTTGGAG+AGG + chr7_2:68741573-68741592 None:intergenic 50.0%
CTCTCCAAGAGTGACTAACG+AGG - chr7_2:68741571-68741590 Msa1071920:CDS 50.0%
ACAGCCTCGTTAGTCACTCT+TGG + chr7_2:68741578-68741597 None:intergenic 50.0%
GACTAACGAGGCTGTTCAGA+AGG - chr7_2:68741583-68741602 Msa1071920:CDS 50.0%
CTTTCAGGCTGCTGCATTGA+AGG - chr7_2:68741697-68741716 Msa1071920:intron 50.0%
TGACATTAGTAGCACGGCGA+TGG + chr7_2:68741730-68741749 None:intergenic 50.0%
! GTGCTACTAATGTCAGTGCC+AGG - chr7_2:68741735-68741754 Msa1071920:intron 50.0%
TACTTTGGCGAGCAGTTGTC+AGG - chr7_2:68742287-68742306 Msa1071920:intron 50.0%
GGCTTCGCCTTTACTGCTAA+TGG - chr7_2:68742308-68742327 Msa1071920:intron 50.0%
AGACAGTCATTGCCTTTGGG+CGG + chr7_2:68742394-68742413 None:intergenic 50.0%
CTTTACCAAGCGCCCAATGA+AGG - chr7_2:68742436-68742455 Msa1071920:CDS 50.0%
GACCAGTTGAGAATGGTGAC+AGG + chr7_2:68742476-68742495 None:intergenic 50.0%
! AGGCTGGTCAACTCTAACGA+AGG + chr7_2:68742498-68742517 None:intergenic 50.0%
TCGTTAGAGTTGACCAGCCT+AGG - chr7_2:68742498-68742517 Msa1071920:intron 50.0%
GGTCGAGTTTATACCTAGGC+TGG + chr7_2:68742514-68742533 None:intergenic 50.0%
TCCTGTGATGTTACAAGGGG+GGG + chr7_2:68742535-68742554 None:intergenic 50.0%
GACCTGCTACCAGATTGCTT+TGG - chr7_2:68742652-68742671 Msa1071920:CDS 50.0%
AGCCAAAGCAATCTGGTAGC+AGG + chr7_2:68742657-68742676 None:intergenic 50.0%
!! TGATGAGGCTGCTTTGAGAG+AGG - chr7_2:68742730-68742749 Msa1071920:CDS 50.0%
!! GATGAGGCTGCTTTGAGAGA+GGG - chr7_2:68742731-68742750 Msa1071920:CDS 50.0%
TGGAGTAGCACATGTGAGTG+TGG + chr7_2:68742937-68742956 None:intergenic 50.0%
GAGTGGATGTCATACACACC+AGG + chr7_2:68743088-68743107 None:intergenic 50.0%
!! GTCAGTTGGTGGGATTCTTG+GGG + chr7_2:68743110-68743129 None:intergenic 50.0%
!! CGTCAGTTGGTGGGATTCTT+GGG + chr7_2:68743111-68743130 None:intergenic 50.0%
!! TCGTCAGTTGGTGGGATTCT+TGG + chr7_2:68743112-68743131 None:intergenic 50.0%
!!! GGGTTTTTAGCCCACAGTCA+GGG + chr7_2:68743195-68743214 None:intergenic 50.0%
TGCAGCAACCATGTTGAGGA+GGG + chr7_2:68743242-68743261 None:intergenic 50.0%
GCCACGGATACAGAGACATT+TGG + chr7_2:68743478-68743497 None:intergenic 50.0%
TAGGGCATAGTTTCACGCCA+TGG - chr7_2:68743601-68743620 Msa1071920:intron 50.0%
GTTTCACGCCATGGTTTCCA+AGG - chr7_2:68743610-68743629 Msa1071920:intron 50.0%
CTCTCTTGGGTCCCATACGA+GGG + chr7_2:68739275-68739294 None:intergenic 55.0%
TCTCTCTTGGGTCCCATACG+AGG + chr7_2:68739276-68739295 None:intergenic 55.0%
GGACAAAAAGAGCAGTGCCG+AGG - chr7_2:68739323-68739342 Msa1071920:intron 55.0%
CCATCCATACCTGGGTGGAA+CGG + chr7_2:68739481-68739500 None:intergenic 55.0%
CCACCAGTCCATCCATACCT+GGG + chr7_2:68739489-68739508 None:intergenic 55.0%
ACCACCAGTCCATCCATACC+TGG + chr7_2:68739490-68739509 None:intergenic 55.0%
!! GGATGGACTGGTGGTGAGAT+TGG - chr7_2:68739495-68739514 Msa1071920:CDS 55.0%
TAATGCCACCGTCCCTGCTA+TGG - chr7_2:68739548-68739567 Msa1071920:CDS 55.0%
GGTCATCTCCATAGCAGGGA+CGG + chr7_2:68739559-68739578 None:intergenic 55.0%
TCACCTCGGGACCCAATTCT+GGG + chr7_2:68739720-68739739 None:intergenic 55.0%
TTCACCTCGGGACCCAATTC+TGG + chr7_2:68739721-68739740 None:intergenic 55.0%
TTGCTCTCCAAAGCCGCCAA+GGG - chr7_2:68740338-68740357 Msa1071920:intron 55.0%
CTTGTAGACGGCAAGGACCT+TGG + chr7_2:68740399-68740418 None:intergenic 55.0%
CTTCGCTGATATTCCCGCTG+AGG - chr7_2:68740674-68740693 Msa1071920:intron 55.0%
! AGGGTCTTGTATGCCTCAGC+GGG + chr7_2:68740690-68740709 None:intergenic 55.0%
! GAGGGTCTTGTATGCCTCAG+CGG + chr7_2:68740691-68740710 None:intergenic 55.0%
!! TTGAGTGGTGTCGCCGCTTA+TGG - chr7_2:68740717-68740736 Msa1071920:intron 55.0%
CTCTGCAAGTTCTGCAGCTC+AGG - chr7_2:68741535-68741554 Msa1071920:CDS 55.0%
GTTCTGCAGCTCAGGCTTCA+AGG - chr7_2:68741543-68741562 Msa1071920:CDS 55.0%
!! ATGGTGGTGGTTGGGAGGAT+TGG + chr7_2:68741791-68741810 None:intergenic 55.0%
ATCCTCCCAACCACCACCAT+TGG - chr7_2:68741791-68741810 Msa1071920:intron 55.0%
!! ATCCAATGGTGGTGGTTGGG+AGG + chr7_2:68741796-68741815 None:intergenic 55.0%
GGGGAATGATCCAATGGTGG+TGG + chr7_2:68741804-68741823 None:intergenic 55.0%
CTGGGGGAATGATCCAATGG+TGG + chr7_2:68741807-68741826 None:intergenic 55.0%
GGTCTGGGGGAATGATCCAA+TGG + chr7_2:68741810-68741829 None:intergenic 55.0%
TCCTTAGTTCCACGGTCTGG+GGG + chr7_2:68741823-68741842 None:intergenic 55.0%
CTCCTTAGTTCCACGGTCTG+GGG + chr7_2:68741824-68741843 None:intergenic 55.0%
CCTCCTTAGTTCCACGGTCT+GGG + chr7_2:68741825-68741844 None:intergenic 55.0%
CCAGACCGTGGAACTAAGGA+GGG - chr7_2:68741823-68741842 Msa1071920:CDS 55.0%
GCGAACCCTCCTTAGTTCCA+CGG + chr7_2:68741831-68741850 None:intergenic 55.0%
GAGGGTTCGCCGTGAATTCA+AGG - chr7_2:68741841-68741860 Msa1071920:CDS 55.0%
CATTCCCTTCATTGGGCGCT+TGG + chr7_2:68742444-68742463 None:intergenic 55.0%
GCCCTGTCACCATTCTCAAC+TGG - chr7_2:68742471-68742490 Msa1071920:CDS 55.0%
GGGGGGTCGAGTTTATACCT+AGG + chr7_2:68742518-68742537 None:intergenic 55.0%
ACCCCCCCTTGTAACATCAC+AGG - chr7_2:68742531-68742550 Msa1071920:intron 55.0%
TGAGAGAGGGACTACCACTG+AGG - chr7_2:68742744-68742763 Msa1071920:CDS 55.0%
GTCCAAGTAGTGAGCGTGCT+CGG + chr7_2:68742774-68742793 None:intergenic 55.0%
AGCACGCTCACTACTTGGAC+TGG - chr7_2:68742774-68742793 Msa1071920:CDS 55.0%
GCACGCTCACTACTTGGACT+GGG - chr7_2:68742775-68742794 Msa1071920:CDS 55.0%
GGAGTCCTGAACACCGACAT+TGG + chr7_2:68742822-68742841 None:intergenic 55.0%
GGACTCCACCCAGGTATGTT+TGG - chr7_2:68742835-68742854 Msa1071920:CDS 55.0%
GTGAGCCAAACATACCTGGG+TGG + chr7_2:68742843-68742862 None:intergenic 55.0%
! TATGGTGCTGGAATTGGCCC+TGG - chr7_2:68743067-68743086 Msa1071920:intron 55.0%
TTGGTGGGATTCTTGGGGAG+TGG + chr7_2:68743105-68743124 None:intergenic 55.0%
TTGTGGGTCAACCCTGACTG+TGG - chr7_2:68743181-68743200 Msa1071920:intron 55.0%
TGTGGGTCAACCCTGACTGT+GGG - chr7_2:68743182-68743201 Msa1071920:intron 55.0%
!!! CGGGTTTTTAGCCCACAGTC+AGG + chr7_2:68743196-68743215 None:intergenic 55.0%
TAAGCCTGCCCTCCTCAACA+TGG - chr7_2:68743231-68743250 Msa1071920:intron 55.0%
CTGCAGCAACCATGTTGAGG+AGG + chr7_2:68743243-68743262 None:intergenic 55.0%
TGGCTGCAGCAACCATGTTG+AGG + chr7_2:68743246-68743265 None:intergenic 55.0%
CCGTTCCACCCAGGTATGGA+TGG - chr7_2:68739478-68739497 Msa1071920:CDS 60.0%
CCAGTCCATCCATACCTGGG+TGG + chr7_2:68739486-68739505 None:intergenic 60.0%
CCACCCAGGTATGGATGGAC+TGG - chr7_2:68739483-68739502 Msa1071920:CDS 60.0%
!! CCCAGGTATGGATGGACTGG+TGG - chr7_2:68739486-68739505 Msa1071920:CDS 60.0%
CATCTCCATAGCAGGGACGG+TGG + chr7_2:68739556-68739575 None:intergenic 60.0%
TGTCCCAGAATTGGGTCCCG+AGG - chr7_2:68739714-68739733 Msa1071920:CDS 60.0%
GTTGCTCTCCAAAGCCGCCA+AGG - chr7_2:68740337-68740356 Msa1071920:intron 60.0%
GTCAACTCCCTTGGCGGCTT+TGG + chr7_2:68740348-68740367 None:intergenic 60.0%
AGAGGCTCTTGCCGGCATTG+TGG - chr7_2:68740875-68740894 Msa1071920:intron 60.0%
GAGGCTCTTGCCGGCATTGT+GGG - chr7_2:68740876-68740895 Msa1071920:intron 60.0%
CTTGCCGGCATTGTGGGCAA+AGG - chr7_2:68740882-68740901 Msa1071920:intron 60.0%
TGGATCATTCCCCCAGACCG+TGG - chr7_2:68741811-68741830 Msa1071920:CDS 60.0%
TCCCCCAGACCGTGGAACTA+AGG - chr7_2:68741819-68741838 Msa1071920:CDS 60.0%
CCCAGACCGTGGAACTAAGG+AGG - chr7_2:68741822-68741841 Msa1071920:CDS 60.0%
CCCTCCTTAGTTCCACGGTC+TGG + chr7_2:68741826-68741845 None:intergenic 60.0%
! TGGTGATGTGAGCCGCCCAA+AGG - chr7_2:68742379-68742398 Msa1071920:intron 60.0%
GTCCGAGCACGCTCACTACT+TGG - chr7_2:68742769-68742788 Msa1071920:CDS 60.0%
CGGCGATCTCGTCAGTTGGT+GGG + chr7_2:68743120-68743139 None:intergenic 60.0%
TCGGCGATCTCGTCAGTTGG+TGG + chr7_2:68743121-68743140 None:intergenic 60.0%
CTGTCGGCGATCTCGTCAGT+TGG + chr7_2:68743124-68743143 None:intergenic 60.0%
CAACTGACGAGATCGCCGAC+AGG - chr7_2:68743122-68743141 Msa1071920:intron 60.0%
GCAACCATGTTGAGGAGGGC+AGG + chr7_2:68743238-68743257 None:intergenic 60.0%
CCTCGGGCTCTCCGTGTACT+AGG + chr7_2:68742039-68742058 None:intergenic 65.0%
CCTAGTACACGGAGAGCCCG+AGG - chr7_2:68742036-68742055 Msa1071920:intron 65.0%
GCGTGCTCGGACTTCCTCAG+TGG + chr7_2:68742761-68742780 None:intergenic 65.0%
CGGTGTTCAGGACTCCACCC+AGG - chr7_2:68742826-68742845 Msa1071920:CDS 65.0%
! TGGAACGGCGCCGAGAGTGG+CGG + chr7_2:68739466-68739485 None:intergenic 70.0%
GGCGCCGTTCCACCCAGGTA+TGG - chr7_2:68739474-68739493 Msa1071920:CDS 70.0%
! GGGTGGAACGGCGCCGAGAG+TGG + chr7_2:68739469-68739488 None:intergenic 75.0%
CTCTCGGCGCCGTTCCACCC+AGG - chr7_2:68739469-68739488 Msa1071920:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 68738472 68743745 68738472 ID=Msa1071920;Name=Msa1071920
chr7_2 mRNA 68738472 68743745 68738472 ID=Msa1071920-mRNA-1;Parent=Msa1071920;Name=Msa1071920-mRNA-1;_AED=0.10;_eAED=0.10;_QI=94|1|1|1|0.83|0.69|13|411|763
chr7_2 exon 68738472 68738498 68738472 ID=Msa1071920-mRNA-1:exon:15118;Parent=Msa1071920-mRNA-1
chr7_2 exon 68738539 68739285 68738539 ID=Msa1071920-mRNA-1:exon:15117;Parent=Msa1071920-mRNA-1
chr7_2 exon 68739370 68739571 68739370 ID=Msa1071920-mRNA-1:exon:15116;Parent=Msa1071920-mRNA-1
chr7_2 exon 68739698 68739948 68739698 ID=Msa1071920-mRNA-1:exon:15115;Parent=Msa1071920-mRNA-1
chr7_2 exon 68740160 68740265 68740160 ID=Msa1071920-mRNA-1:exon:15114;Parent=Msa1071920-mRNA-1
chr7_2 exon 68740347 68740513 68740347 ID=Msa1071920-mRNA-1:exon:15113;Parent=Msa1071920-mRNA-1
chr7_2 exon 68740610 68740690 68740610 ID=Msa1071920-mRNA-1:exon:15112;Parent=Msa1071920-mRNA-1
chr7_2 exon 68741058 68741221 68741058 ID=Msa1071920-mRNA-1:exon:15111;Parent=Msa1071920-mRNA-1
chr7_2 exon 68741314 68741705 68741314 ID=Msa1071920-mRNA-1:exon:15110;Parent=Msa1071920-mRNA-1
chr7_2 exon 68741800 68741927 68741800 ID=Msa1071920-mRNA-1:exon:15109;Parent=Msa1071920-mRNA-1
chr7_2 exon 68742425 68742512 68742425 ID=Msa1071920-mRNA-1:exon:15108;Parent=Msa1071920-mRNA-1
chr7_2 exon 68742619 68742972 68742619 ID=Msa1071920-mRNA-1:exon:15107;Parent=Msa1071920-mRNA-1
chr7_2 exon 68743656 68743745 68743656 ID=Msa1071920-mRNA-1:exon:15106;Parent=Msa1071920-mRNA-1
chr7_2 five_prime_UTR 68743656 68743745 68743656 ID=Msa1071920-mRNA-1:five_prime_utr;Parent=Msa1071920-mRNA-1
chr7_2 five_prime_UTR 68742969 68742972 68742969 ID=Msa1071920-mRNA-1:five_prime_utr;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68742619 68742968 68742619 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68742425 68742512 68742425 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68741800 68741927 68741800 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68741314 68741705 68741314 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68741058 68741221 68741058 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68740610 68740690 68740610 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68740347 68740513 68740347 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68740160 68740265 68740160 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68739698 68739948 68739698 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68739370 68739571 68739370 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 CDS 68738923 68739285 68738923 ID=Msa1071920-mRNA-1:cds;Parent=Msa1071920-mRNA-1
chr7_2 three_prime_UTR 68738539 68738922 68738539 ID=Msa1071920-mRNA-1:three_prime_utr;Parent=Msa1071920-mRNA-1
chr7_2 three_prime_UTR 68738472 68738498 68738472 ID=Msa1071920-mRNA-1:three_prime_utr;Parent=Msa1071920-mRNA-1
Gene Sequence

>Msa1071920

ATGGCTTCTCACATTGTTGGATACCCTCGTATGGGACCCAAGAGAGAGTTGAAATTTGCTTTGGAATCATTCTGGGACAAAAAGAGCAGTGCCGAGGATTTGAAGAAGGTTTCTGCTGATCTAAGAGCATCCATCTGGAAACAGATGTCTGATGTTGGGATCAAGTATATCCCAAGCAACACTTTTACTTACTATGATCATGTACTTGATACTACCGCCACTCTCGGCGCCGTTCCACCCAGGTATGGATGGACTGGTGGTGAGATTGGATTCGATACTTACTTTTCAATGGCTAGAGGTAATGCCACCGTCCCTGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCAGAATTGGGTCCCGAGGTGAACTTTGTGTACTCTTCTCACAAGGCTGTTGAAGAATACAAGGAAGCCAAGGCGCTTGGAGTAGACACTGTTCCCGTTCTTGTTGGCCCTGTTTCATACTTGTTGCTCTCCAAAGCCGCCAAGGGAGTTGACAAATCCTTTGATCTCCTATCTTTGCTTCCCAAGGTCCTTGCCGTCTACAAGGAGGTTATTGCTGATCTTAAGGCAGCTGGTGCTCAGTTTATTCAATTTGATGAACCCACACTTGTCCTGGATCTTGAAGCTCACAAGTTACAAGCATTTACTGATGCATATGCAGCACTTACACCTTCTTTTGAAGGTCTCCATGTTCTTGTTGAGACCTACTTCGCTGATATTCCCGCTGAGGCATACAAGACCCTCACATCTTTGAGTGGTGTCGCCGCTTATGGATTTGATTTAGTCCGTGGAACTAAGACTCTTGATTTGATCAAGGCTGGATTTCCCAGTGGAAAATGGATCTTTGCTGGAGTCGTTGATGGAAGGAACATCTGGGCAAATGATCTTGAGGCTTCTCTCAGTACATTAGAGGCTCTTGCCGGCATTGTGGGCAAAGAGAGAATTGTTGTGTCCACTTCCTGCTCACTTCTTCACACTGCTGTGGATCTTGTTAACGAGACCAAGTTGGATGATGAAATTAAGTCATGGTTAGCTTTTGCTGCCCAAAAAGTTGTTGAAGTAAATGCATTGGCTAATGCACTTGCAGGCAACAAGGATGAGGCCATCTTCTCTGCAAGTTCTGCAGCTCAGGCTTCAAGGAAGTCCTCTCCAAGAGTGACTAACGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCAGACCATCGCCGTGCTACTAATGTCAGTGCCAGGTTGGATGCTCAACAAAAGAAGCTTAATCTTCCAATCCTCCCAACCACCACCATTGGATCATTCCCCCAGACCGTGGAACTAAGGAGGGTTCGCCGTGAATTCAAGGCTAAGAAGATCTCCGAGGAAGAGTACATTAAGGCAATTAAGGAGGAAATCCGCTCAGTTGTTGAGCTTCAAGAAGAGCTTGATATTGATGTCCTAGTACACGGAGAGCCCGAGAGGAATGATATGGTTGAGTACTTTGGCGAGCAGTTGTCAGGCTTCGCCTTTACTGCTAATGGATGGGTGCAATCCTATGGATCTCGTTGTGTCAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAGGCAATGACTGTCTTCTGGTCAGCTCTTGCTCAGAGCTTTACCAAGCGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTCGTTAGAGTTGACCAGCCTAGATCTGAGACCTGCTACCAGATTGCTTTGGCTATTAAGGATGAAGTTGAAGACCTTGAGAAAGGTGGTATTGGTGTCATCCAAATTGATGAGGCTGCTTTGAGAGAGGGACTACCACTGAGGAAGTCCGAGCACGCTCACTACTTGGACTGGGCTGTCCACTCCTTCAGAATCACCAATGTCGGTGTTCAGGACTCCACCCAGATCCACACTCACATGTGCTACTCCAACTTCAACGACATCATTCATTCCATCATTGATATGGATGCTGATGTTATCACAATTGAGAACTCCCGTTCCGACGAAAAGCTTCTATCAGTCTTCCGTGAAGGAGTTGTTTATGGTGCTGGAATTGGCCCTGGTGTGTATGACATCCACTCCCCAAGAATCCCACCAACTGACGAGATCGCCGACAGGATCAACAAGATGCTTGCTGTCCTTGAGAAGAACGTTTTGTGGGTCAACCCTGACTGTGGGCTAAAAACCCGTAAGTACACAGAGGTTAAGCCTGCCCTCCTCAACATGGTTGCTGCAGCCAAACAAATCCGTAACGAGCTTGCCAAGTGA
Protein sequence

>Msa1071920

MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLKKVSADLRASIWKQMSDVGIKYIPSNTFTYYDHVLDTTATLGAVPPRYGWTGGEIGFDTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPEVNFVYSSHKAVEEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFDLLSLLPKVLAVYKEVIADLKAAGAQFIQFDEPTLVLDLEAHKLQAFTDAYAALTPSFEGLHVLVETYFADIPAEAYKTLTSLSGVAAYGFDLVRGTKTLDLIKAGFPSGKWIFAGVVDGRNIWANDLEASLSTLEALAGIVGKERIVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQKVVEVNALANALAGNKDEAIFSASSAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKAKKISEEEYIKAIKEEIRSVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSALAQSFTKRPMKGMLTGPVTILNWSFVRVDQPRSETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAHYLDWAVHSFRITNVGVQDSTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVVYGAGIGPGVYDIHSPRIPPTDEIADRINKMLAVLEKNVLWVNPDCGLKTRKYTEVKPALLNMVAAAKQIRNELAK*