AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1031990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031990 MtrunA17_Chr7g0253781 99.869 763 1 0 1 763 1 763 0.0 1571
Msa1031990 MtrunA17_Chr6g0461111 86.745 762 101 0 1 762 1 762 0.0 1384
Msa1031990 MtrunA17_Chr3g0118901 84.321 759 119 0 4 762 52 810 0.0 1342
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031990 AT5G17920.2 87.927 762 92 0 1 762 1 762 0.0 1408
Msa1031990 AT5G17920.1 87.927 762 92 0 1 762 1 762 0.0 1408
Msa1031990 AT3G03780.1 85.696 762 109 0 1 762 1 762 0.0 1372
Msa1031990 AT3G03780.3 85.696 762 109 0 1 762 1 762 0.0 1372
Msa1031990 AT3G03780.2 85.696 762 109 0 1 762 1 762 0.0 1372
Msa1031990 AT5G20980.2 78.375 763 165 0 1 763 49 811 0.0 1271
Msa1031990 AT5G20980.1 78.375 763 165 0 1 763 49 811 0.0 1271

Find 255 sgRNAs with CRISPR-Local

Find 431 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTATACCTTAAAATATT+AGG 0.087252 7_1:-66786945 Msa1031990:three_prime_UTR
AGTGGGGTAAAATGAAATTT+TGG 0.152282 7_1:+66787086 None:intergenic
CCAGATTGCTTTGGCTATTA+AGG 0.168335 7_1:-66787865 Msa1031990:CDS
AATAACTGTGTGCAATATTT+AGG 0.188710 7_1:-66787146 Msa1031990:three_prime_UTR
AATGATATGGTTGAGTATTT+TGG 0.192723 7_1:-66788254 Msa1031990:CDS
TTGAGTGGTGTCGCCGCTTA+TGG 0.211110 7_1:-66789810 Msa1031990:CDS
TTCACCTCGGGACCCAATTC+TGG 0.220600 7_1:+66790811 None:intergenic
AATTTGCTTTGGAATCATTC+TGG 0.250181 7_1:-66791228 Msa1031990:CDS
TCAAAGCAGCCTCATCAATT+TGG 0.261068 7_1:+66787802 None:intergenic
CATTCATTCCATCATTGATA+TGG 0.263056 7_1:-66787556 Msa1031990:CDS
CGTCAGTTGGTGGGATTCTT+GGG 0.264034 7_1:+66787418 None:intergenic
TTCCGTGAAGGAGTTGTTTA+TGG 0.264508 7_1:-66787477 Msa1031990:CDS
GTCAACTCCCTTGGCGGCTT+TGG 0.265173 7_1:+66790182 None:intergenic
CTTTATACCTTAAAATATTA+GGG 0.268467 7_1:-66786944 Msa1031990:three_prime_UTR
CCCTCCTTAGTTCCACGGTC+TGG 0.268662 7_1:+66788703 None:intergenic
CATGATTATTTGCACAAAAC+TGG 0.282796 7_1:+66786997 None:intergenic
CCACTTTATTGTCCCAGAAT+TGG 0.283271 7_1:-66790824 Msa1031990:CDS
CCAATGAAGGGAATGCTTAC+TGG 0.290945 7_1:-66788077 Msa1031990:CDS
CTGGATTTCCCAGTGGAAAA+TGG 0.292476 7_1:-66789743 Msa1031990:CDS
TCGTCAGTTGGTGGGATTCT+TGG 0.294764 7_1:+66787417 None:intergenic
CTCTGCAAGTTCTGCAGCTC+AGG 0.318713 7_1:-66788991 Msa1031990:CDS
AGCAAATTTCAACTCTCTCT+TGG 0.323635 7_1:+66791243 None:intergenic
CTTTCAGGCTGCTGCATTGA+AGG 0.334340 7_1:-66788829 Msa1031990:intron
CACTTTATTGTCCCAGAATT+GGG 0.341529 7_1:-66790823 Msa1031990:CDS
GGCTTCTCTCAGTACATTAG+AGG 0.347630 7_1:-66789670 Msa1031990:CDS
GCATTGGCTAATGCACTTGC+AGG 0.348832 7_1:-66789403 Msa1031990:CDS
GAGAGAGTTGAAATTTGCTT+TGG 0.348888 7_1:-66791239 Msa1031990:CDS
CAGAAGACAGTCATTGCCTT+TGG 0.350697 7_1:+66788131 None:intergenic
AGAGTACATTAAGGCAATTA+AGG 0.356445 7_1:-66788562 Msa1031990:CDS
CAAAGGCAATGACTGTCTTC+TGG 0.357313 7_1:-66788130 Msa1031990:CDS
CCAGTAAGCATTCCCTTCAT+TGG 0.357787 7_1:+66788077 None:intergenic
AATCACCAATGTCGGTGTTC+AGG 0.357796 7_1:-66787712 Msa1031990:CDS
GGCTTCGCCTTTACTGCTAA+TGG 0.364303 7_1:-66788218 Msa1031990:CDS
GATTGTAAGATATTGATTAC+AGG 0.365643 7_1:+66786819 None:intergenic
GAGAGCAACAAGTATGAAAC+AGG 0.367592 7_1:+66790204 None:intergenic
ATCTTCTTCGCTTCTTGTTA+AGG 0.369718 7_1:+66792066 None:intergenic
CTTAACCTCTGTGTACTTAC+GGG 0.374221 7_1:+66787314 None:intergenic
GCTTAACCTCTGTGTACTTA+CGG 0.383228 7_1:+66787313 None:intergenic
CAGTAAGCATTCCCTTCATT+GGG 0.383689 7_1:+66788078 None:intergenic
CCTCCTTAGTTCCACGGTCT+GGG 0.391526 7_1:+66788704 None:intergenic
AAGCTCGTTACGGATTTGTT+TGG 0.391968 7_1:+66787263 None:intergenic
ATGATCCAATGGTGGTGGTT+GGG 0.395881 7_1:+66788730 None:intergenic
TCGTTGATGGAAGGAACATC+TGG 0.398500 7_1:-66789707 Msa1031990:CDS
ACTTCTTAGCCTTGAATTCA+CGG 0.402531 7_1:+66788676 None:intergenic
GGATGGACTGGTGGTGAGAT+TGG 0.403071 7_1:-66791034 Msa1031990:CDS
GTTGTTTATGGTGCTGGAAT+TGG 0.403152 7_1:-66787465 Msa1031990:CDS
AGTGGAAAATGGATCTTTGC+TGG 0.403330 7_1:-66789732 Msa1031990:CDS
CCTCGGGCTCTCCGTGTACT+AGG 0.405131 7_1:+66788490 None:intergenic
GACACTGTTCCCGTTCTTGT+TGG 0.406603 7_1:-66790228 Msa1031990:CDS
ATCTTTGCTGGAGTCGTTGA+TGG 0.408358 7_1:-66789720 Msa1031990:CDS
CCAAGGATATTGTCACATCT+TGG 0.411687 7_1:-66786900 Msa1031990:three_prime_UTR
AGCACGCTCACTACTTGGAC+TGG 0.412551 7_1:-66787752 Msa1031990:CDS
GGAGGTTATTGCTGATCTTA+AGG 0.413201 7_1:-66790015 Msa1031990:CDS
GTCAAGCCACCAATCATCTA+TGG 0.414314 7_1:-66788167 Msa1031990:CDS
GTCCGAGCACGCTCACTACT+TGG 0.414790 7_1:-66787757 Msa1031990:CDS
ATGGTGGTGGTTGGGAGGAT+TGG 0.414964 7_1:+66788738 None:intergenic
AAAATGGCTTCTCACATTGT+TGG 0.417361 7_1:-66791283 Msa1031990:CDS
AGAAGACAGTCATTGCCTTT+GGG 0.421292 7_1:+66788132 None:intergenic
CTTAATTTCATCATCCAACT+TGG 0.422844 7_1:+66789468 None:intergenic
GTTCTGCAGCTCAGGCTTCA+AGG 0.423524 7_1:-66788983 Msa1031990:CDS
ATTTGCTTTGGAATCATTCT+GGG 0.424933 7_1:-66791227 Msa1031990:CDS
TTCACTTGGCAAGCTCGTTA+CGG 0.424936 7_1:+66787253 None:intergenic
CAGTGCCGAGGATTTGAAGA+AGG 0.427889 7_1:-66791194 Msa1031990:CDS
GCAAATTTCAACTCTCTCTT+GGG 0.427892 7_1:+66791244 None:intergenic
TGATGAACCCACACTTGTCC+TGG 0.428099 7_1:-66789967 Msa1031990:CDS
ACTCTTGATTTGATCAAGGC+TGG 0.428427 7_1:-66789762 Msa1031990:CDS
GCCCTGTCACCATTCTCAAC+TGG 0.432386 7_1:-66788055 Msa1031990:CDS
CATTCCCTTCATTGGGCGCT+TGG 0.433045 7_1:+66788085 None:intergenic
CTCCGAGGAAGAGTACATTA+AGG 0.440393 7_1:-66788571 Msa1031990:CDS
CTGATCTAAGAGCATCCATC+TGG 0.440680 7_1:-66791165 Msa1031990:CDS
TGAAAGGTTAAACGTATAAG+AGG 0.441222 7_1:-66786861 Msa1031990:three_prime_UTR
GAGGCTCTTGCCGGCATTGT+GGG 0.441484 7_1:-66789651 Msa1031990:CDS
TCGCCTTTACTGCTAATGGA+TGG 0.442946 7_1:-66788214 Msa1031990:CDS
AGAGGCTCTTGCCGGCATTG+TGG 0.443385 7_1:-66789652 Msa1031990:CDS
CGCCTTTACTGCTAATGGAT+GGG 0.444739 7_1:-66788213 Msa1031990:CDS
CCTTAATAGCCAAAGCAATC+TGG 0.448275 7_1:+66787865 None:intergenic
GAAACAGGGCCAACAAGAAC+GGG 0.453352 7_1:+66790219 None:intergenic
CTTGTAGACGGCAAGGACCT+TGG 0.453971 7_1:+66790131 None:intergenic
GAGGGTTCGCCGTGAATTCA+AGG 0.455640 7_1:-66788685 Msa1031990:CDS
TTGTAGACGGCAAGGACCTT+GGG 0.455997 7_1:+66790132 None:intergenic
CACCCATCCATTAGCAGTAA+AGG 0.457339 7_1:+66788211 None:intergenic
ATCTGTTTGATTTACACAAA+AGG 0.459878 7_1:-66787193 Msa1031990:three_prime_UTR
CACCATAAACAACTCCTTCA+CGG 0.461766 7_1:+66787475 None:intergenic
CCAAGATGTGACAATATCCT+TGG 0.464130 7_1:+66786900 None:intergenic
GGACCTTGGGAAGCAAAGAT+AGG 0.467226 7_1:+66790145 None:intergenic
AGTAAGTAAAAGTGTTGCTT+GGG 0.467361 7_1:+66791110 None:intergenic
GCCACGGATACAGAGACATT+TGG 0.467926 7_1:+66787052 None:intergenic
TAAGACTCTTGATTTGATCA+AGG 0.473829 7_1:-66789766 Msa1031990:CDS
CTTTACCAAGCGCCCAATGA+AGG 0.474796 7_1:-66788090 Msa1031990:CDS
ATTGCTGATCTTAAGGCAGC+TGG 0.475107 7_1:-66790008 Msa1031990:CDS
ACCACCAGTCCATCCATACC+TGG 0.475259 7_1:+66791042 None:intergenic
ATCCTCCCAACCACCACCAT+TGG 0.476001 7_1:-66788735 Msa1031990:CDS
TAATGCCACCGTCCCTGCTA+TGG 0.476367 7_1:-66790981 Msa1031990:CDS
ATGAATGATGTCGTTGAAGT+TGG 0.478731 7_1:+66787572 None:intergenic
AAAGGATTTGTCAACTCCCT+TGG 0.479781 7_1:+66790173 None:intergenic
TGCAGAACTTGCAGAGAAGA+TGG 0.480429 7_1:+66788998 None:intergenic
TATGGTGCTGGAATTGGCCC+TGG 0.480835 7_1:-66787459 Msa1031990:CDS
TCACCTCGGGACCCAATTCT+GGG 0.481128 7_1:+66790812 None:intergenic
ATCAGCATCCATATCAATGA+TGG 0.484383 7_1:+66787548 None:intergenic
AACGAGCTTGCCAAGTGAAA+AGG 0.486521 7_1:-66787249 Msa1031990:exon
TCTCCTATCTTTGCTTCCCA+AGG 0.486549 7_1:-66790148 Msa1031990:CDS
GCAACCATGTTGAGGAGGGC+AGG 0.486565 7_1:+66787291 None:intergenic
ACAGCCTCGTTAGTCACTCT+TGG 0.488254 7_1:+66788951 None:intergenic
ACTTGTGAGCTTCAAGATCC+AGG 0.488502 7_1:+66789949 None:intergenic
CTTGATACTACCGCCACTCT+TGG 0.490285 7_1:-66791076 Msa1031990:CDS
CAAGGCTGTTGAAGAATACA+AGG 0.493097 7_1:-66790770 Msa1031990:CDS
GAAGGAGTTGTTTATGGTGC+TGG 0.493441 7_1:-66787471 Msa1031990:CDS
TGCCTTAATGTACTCTTCCT+CGG 0.493586 7_1:+66788569 None:intergenic
TTGGTGGGATTCTTGGGGAG+TGG 0.493782 7_1:+66787424 None:intergenic
GTCCAAGTAGTGAGCGTGCT+CGG 0.494016 7_1:+66787755 None:intergenic
AATGATCCAATGGTGGTGGT+TGG 0.497627 7_1:+66788729 None:intergenic
CTCACATCACCATAGATGAT+TGG 0.497831 7_1:+66788158 None:intergenic
AATACCTTTGCCCACAATGC+CGG 0.498196 7_1:+66789641 None:intergenic
TTGTCACATCTTGGTTTGCA+AGG 0.502041 7_1:-66786891 Msa1031990:three_prime_UTR
GTGAAGAAGTGAGCAGGAAG+TGG 0.504910 7_1:+66789516 None:intergenic
TTAAACTTCTTACTTGTAGA+CGG 0.506307 7_1:+66790119 None:intergenic
AATGGATGGGTGCAATCCTA+TGG 0.506434 7_1:-66788200 Msa1031990:CDS
TAGTAAGTAAAAGTGTTGCT+TGG 0.508330 7_1:+66791109 None:intergenic
AGTACATTAGAGGCTCTTGC+CGG 0.509775 7_1:-66789660 Msa1031990:CDS
CACTTGGTCATCTCCATAGC+AGG 0.511355 7_1:+66790968 None:intergenic
GGATTTGTCAACTCCCTTGG+CGG 0.513440 7_1:+66790176 None:intergenic
TGCAATATCAATAAAGATTG+TGG 0.516704 7_1:+66787025 None:intergenic
CTAGTTGGTGTCGAACCACT+TGG 0.518118 7_1:+66790952 None:intergenic
AGCCAAAGCAATCTGGTAGC+AGG 0.519856 7_1:+66787872 None:intergenic
TTGCCAAGTGAAAAGGTTGA+AGG 0.520263 7_1:-66787242 Msa1031990:exon
GACCTTGAGAAAGGTGGTAT+TGG 0.521585 7_1:-66787831 Msa1031990:CDS
AGCAGTGTGAAGAAGTGAGC+AGG 0.525551 7_1:+66789510 None:intergenic
TCGGCGATCTCGTCAGTTGG+TGG 0.525621 7_1:+66787408 None:intergenic
CCGTTCCACCCAGGTATGGA+TGG 0.526113 7_1:-66791051 Msa1031990:CDS
GACCAGTTGAGAATGGTGAC+AGG 0.532128 7_1:+66788053 None:intergenic
AGTTGTTGAAGTAAATGCAT+TGG 0.532315 7_1:-66789419 Msa1031990:CDS
GACCTGCTACCAGATTGCTT+TGG 0.533114 7_1:-66787874 Msa1031990:CDS
CTCCTTAGTTCCACGGTCTG+GGG 0.533778 7_1:+66788705 None:intergenic
GATGAGGCTGCTTTGAGAGA+GGG 0.534990 7_1:-66787795 Msa1031990:CDS
GTTTCACGCCATGGTTTCCA+AGG 0.535227 7_1:-66786917 Msa1031990:three_prime_UTR
TTTCAGGCTGCTGCATTGAA+GGG 0.536663 7_1:-66788828 Msa1031990:intron
TATGGATTTGATTTAGTCCG+TGG 0.537748 7_1:-66789792 Msa1031990:CDS
GGAAACAGATGTCTGATGTT+GGG 0.538478 7_1:-66791144 Msa1031990:CDS
TCCAAATGTCTCTGTATCCG+TGG 0.540894 7_1:-66787053 Msa1031990:three_prime_UTR
GTTGCTCTCCAAAGCCGCCA+AGG 0.542973 7_1:-66790190 Msa1031990:CDS
AGGGTCTTGTATGCCTCAGC+GGG 0.543065 7_1:+66789840 None:intergenic
TGAAACAGGGCCAACAAGAA+CGG 0.543972 7_1:+66790218 None:intergenic
ACATGGAGACCTTCAAAAGA+AGG 0.544230 7_1:+66789891 None:intergenic
AACGAAGGACCAGTTGAGAA+TGG 0.550417 7_1:+66788046 None:intergenic
CGGCGATCTCGTCAGTTGGT+GGG 0.551989 7_1:+66787409 None:intergenic
GGGGAATGATCCAATGGTGG+TGG 0.552050 7_1:+66788725 None:intergenic
CTCACTTCTTCACACTGCTG+TGG 0.553458 7_1:-66789506 Msa1031990:CDS
CCCACAAAACGTTCTTCTCA+AGG 0.553901 7_1:+66787361 None:intergenic
TGGAAACAGATGTCTGATGT+TGG 0.553919 7_1:-66791145 Msa1031990:CDS
TCGTTAGAGTTGACCAGCCT+AGG 0.554706 7_1:-66788028 Msa1031990:intron
TGTGGGTCAACCCTGACTGT+GGG 0.554903 7_1:-66787344 Msa1031990:CDS
TTGTGGGTCAACCCTGACTG+TGG 0.555145 7_1:-66787345 Msa1031990:CDS
CATTGTTGGATACCCTCGTA+TGG 0.555284 7_1:-66791269 Msa1031990:CDS
GACTAACGAGGCTGTTCAGA+AGG 0.555699 7_1:-66788943 Msa1031990:CDS
CCACCCAGGTATGGATGGAC+TGG 0.557087 7_1:-66791046 Msa1031990:CDS
TTGCTGGAGTCGTTGATGGA+AGG 0.557997 7_1:-66789716 Msa1031990:CDS
CTTGCCGGCATTGTGGGCAA+AGG 0.558431 7_1:-66789645 Msa1031990:intron
TAGGGCATAGTTTCACGCCA+TGG 0.559076 7_1:-66786926 Msa1031990:three_prime_UTR
TTGCTCTCCAAAGCCGCCAA+GGG 0.567535 7_1:-66790189 Msa1031990:CDS
TGCAGCAACCATGTTGAGGA+GGG 0.567910 7_1:+66787287 None:intergenic
GTGCTACTAATGTCAGTGCC+AGG 0.568192 7_1:-66788791 Msa1031990:CDS
GAAGTTGAAGACCTTGAGAA+AGG 0.568559 7_1:-66787840 Msa1031990:CDS
ACCTTTCGGTGTTAGTGTAG+AGG 0.570135 7_1:+66792024 None:intergenic
AGGCTGGTCAACTCTAACGA+AGG 0.572648 7_1:+66788031 None:intergenic
CTGTCGGCGATCTCGTCAGT+TGG 0.575748 7_1:+66787405 None:intergenic
GGGTGGAACGGCGCCAAGAG+TGG 0.575806 7_1:+66791063 None:intergenic
GAGTACACAAAGTTCACCTC+GGG 0.576283 7_1:+66790799 None:intergenic
ACATCACCATAGATGATTGG+TGG 0.578253 7_1:+66788161 None:intergenic
AGAAACCTTCTTCAAATCCT+CGG 0.579553 7_1:+66791189 None:intergenic
TCTTGTTAACGAGACCAAGT+TGG 0.581310 7_1:-66789482 Msa1031990:CDS
TCTCTCTTGGGTCCCATACG+AGG 0.582372 7_1:+66791256 None:intergenic
CATCTGGGCAAATGATCTTG+AGG 0.583442 7_1:-66789691 Msa1031990:CDS
ATCAGACATCTGTTTCCAGA+TGG 0.583712 7_1:+66791150 None:intergenic
TCCTTAGTTCCACGGTCTGG+GGG 0.584719 7_1:+66788706 None:intergenic
TTTGCAAGGATATTGTTGAA+AGG 0.585081 7_1:-66786877 Msa1031990:three_prime_UTR
GTCAGTTGGTGGGATTCTTG+GGG 0.585834 7_1:+66787419 None:intergenic
CTGCAGCAACCATGTTGAGG+AGG 0.586019 7_1:+66787286 None:intergenic
GCACGCTCACTACTTGGACT+GGG 0.587006 7_1:-66787751 Msa1031990:CDS
AATCAAGAGTCTTAGTTCCA+CGG 0.587307 7_1:+66789775 None:intergenic
TGATGAGGCTGCTTTGAGAG+AGG 0.587396 7_1:-66787796 Msa1031990:CDS
CCATCCATACCTGGGTGGAA+CGG 0.587440 7_1:+66791051 None:intergenic
AGCGGGAATATCAGCGAAGT+AGG 0.587569 7_1:+66789857 None:intergenic
CCAATTCTGGGACAATAAAG+TGG 0.587631 7_1:+66790824 None:intergenic
TTCAAGATCCAGGACAAGTG+TGG 0.587633 7_1:+66789959 None:intergenic
CTTTGTGTACTCTTCTCACA+AGG 0.588250 7_1:-66790788 Msa1031990:CDS
CATTGGTGATTCTGAAGGAG+TGG 0.589827 7_1:+66787724 None:intergenic
ACTTGCAGGCAACAAGGATG+AGG 0.590756 7_1:-66789389 Msa1031990:intron
TTTACCAAGCGCCCAATGAA+GGG 0.590785 7_1:-66788089 Msa1031990:CDS
TCCTTCAGAATCACCAATGT+CGG 0.592425 7_1:-66787720 Msa1031990:CDS
GGTCGAGTTTATACCTAGGC+TGG 0.592475 7_1:+66788015 None:intergenic
CACCAATACCACCTTTCTCA+AGG 0.596575 7_1:+66787829 None:intergenic
TCCTCTACACTAACACCGAA+AGG 0.597221 7_1:-66792025 Msa1031990:intron
AAGCAAAGATAGGAGATCAA+AGG 0.597361 7_1:+66790155 None:intergenic
GGAGTCCTGAACACCGACAT+TGG 0.602532 7_1:+66787707 None:intergenic
CTTGACACAACGAGATCCAT+AGG 0.604689 7_1:+66788184 None:intergenic
ATCCAATGGTGGTGGTTGGG+AGG 0.606015 7_1:+66788733 None:intergenic
TGGATGATGAAATTAAGTCA+TGG 0.607380 7_1:-66789462 Msa1031990:CDS
TGACATTAGTAGCACGGCGA+TGG 0.607809 7_1:+66788799 None:intergenic
GCGAACCCTCCTTAGTTCCA+CGG 0.608505 7_1:+66788698 None:intergenic
TAATGCACTTGCAGGCAACA+AGG 0.608842 7_1:-66789395 Msa1031990:CDS
GAGTGGATGTCATACACACC+AGG 0.609608 7_1:+66787441 None:intergenic
CCAGACCGTGGAACTAAGGA+GGG 0.610455 7_1:-66788703 Msa1031990:CDS
CAACTGACGAGATCGCCGAC+AGG 0.610689 7_1:-66787404 Msa1031990:CDS
CTCGTTAGTCACTCTTGGAG+AGG 0.610883 7_1:+66788956 None:intergenic
ATTGTAAGATATTGATTACA+GGG 0.611245 7_1:+66786820 None:intergenic
TGGCTGCAGCAACCATGTTG+AGG 0.611356 7_1:+66787283 None:intergenic
TAAAGATTGTGGCAGAGCCA+CGG 0.616622 7_1:+66787036 None:intergenic
AGACAGTCATTGCCTTTGGG+CGG 0.616757 7_1:+66788135 None:intergenic
CGTTGATGGAAGGAACATCT+GGG 0.617267 7_1:-66789706 Msa1031990:CDS
AAGCATCTTGTTGATCCTGT+CGG 0.618740 7_1:+66787389 None:intergenic
GGTCATCTCCATAGCAGGGA+CGG 0.618946 7_1:+66790973 None:intergenic
TGGAACGGCGCCAAGAGTGG+CGG 0.619281 7_1:+66791066 None:intergenic
TCAAGATCCAGGACAAGTGT+GGG 0.621194 7_1:+66789960 None:intergenic
CTCTCTTGGGTCCCATACGA+GGG 0.622388 7_1:+66791257 None:intergenic
ATTGTTGGATACCCTCGTAT+GGG 0.623364 7_1:-66791268 Msa1031990:CDS
CTTCTTACTTGTAGACGGCA+AGG 0.623727 7_1:+66790124 None:intergenic
TGTCCCAGAATTGGGTCCCG+AGG 0.624259 7_1:-66790815 Msa1031990:CDS
ACCGACATTGGTGATTCTGA+AGG 0.624679 7_1:+66787719 None:intergenic
GACTAAATCAAATCCATAAG+CGG 0.625920 7_1:+66789797 None:intergenic
GACAATATCCTTGGAAACCA+TGG 0.626077 7_1:+66786909 None:intergenic
GTACATTAAGGCAATTAAGG+AGG 0.627912 7_1:-66788559 Msa1031990:CDS
CCCAGGTATGGATGGACTGG+TGG 0.629978 7_1:-66791043 Msa1031990:CDS
AGTAGGTCTCAACAAGAACA+TGG 0.630158 7_1:+66789874 None:intergenic
CTTCTATCAGTCTTCCGTGA+AGG 0.630174 7_1:-66787489 Msa1031990:CDS
TAAGCCTGCCCTCCTCAACA+TGG 0.632365 7_1:-66787295 Msa1031990:CDS
GTTGAAGACCTTGAGAAAGG+TGG 0.637199 7_1:-66787837 Msa1031990:CDS
GACACCACTCAAAGATGTGA+GGG 0.637443 7_1:+66789821 None:intergenic
GATATTGATGTCCTAGTACA+CGG 0.639077 7_1:-66788501 Msa1031990:CDS
TGGTGATGTGAGCCGCCCAA+AGG 0.639821 7_1:-66788147 Msa1031990:CDS
CGACACCACTCAAAGATGTG+AGG 0.643850 7_1:+66789820 None:intergenic
CGGTGTTCAGGACTCCACCC+AGG 0.645289 7_1:-66787700 Msa1031990:intron
ACCAGTTGAGAATGGTGACA+GGG 0.646821 7_1:+66788054 None:intergenic
TGGAGTAGCACATGTGAGTG+TGG 0.647254 7_1:+66787592 None:intergenic
TGAAGAATACAAGGAAGCCA+AGG 0.648603 7_1:-66790761 Msa1031990:CDS
CTTCGCTGATATTCCCGCTG+AGG 0.651444 7_1:-66789853 Msa1031990:CDS
TGGCACTGACATTAGTAGCA+CGG 0.651735 7_1:+66788793 None:intergenic
ATCAAGGCTGGATTTCCCAG+TGG 0.656695 7_1:-66789750 Msa1031990:CDS
GAGGGTCTTGTATGCCTCAG+CGG 0.658058 7_1:+66789839 None:intergenic
CCACCAGTCCATCCATACCT+GGG 0.661096 7_1:+66791043 None:intergenic
ACTTGGTCATCTCCATAGCA+GGG 0.665945 7_1:+66790969 None:intergenic
AGAGTACACAAAGTTCACCT+CGG 0.672545 7_1:+66790798 None:intergenic
CATCTCCATAGCAGGGACGG+TGG 0.675302 7_1:+66790976 None:intergenic
TACTAATGTCAGTGCCAGGT+TGG 0.676683 7_1:-66788787 Msa1031990:CDS
TGGTGTCATCCAAATTGATG+AGG 0.682603 7_1:-66787811 Msa1031990:CDS
GCGTGCTCGGACTTCCTCAG+TGG 0.686114 7_1:+66787768 None:intergenic
AAGACCCTCACATCTTTGAG+TGG 0.695040 7_1:-66789825 Msa1031990:CDS
CTTGAAGCTCAACAACTGAG+CGG 0.697886 7_1:+66788532 None:intergenic
AGAATACAAGGAAGCCAAGG+CGG 0.708610 7_1:-66790758 Msa1031990:intron
CTGCTATGGAGATGACCAAG+TGG 0.713786 7_1:-66790967 Msa1031990:CDS
CTCTCCAAGAGTGACTAACG+AGG 0.723815 7_1:-66788955 Msa1031990:CDS
CCAGTCCATCCATACCTGGG+TGG 0.730069 7_1:+66791046 None:intergenic
AGAGCAACAAGTATGAAACA+GGG 0.741881 7_1:+66790205 None:intergenic
AGTGGATGTCATACACACCA+GGG 0.742744 7_1:+66787442 None:intergenic
GTGAGCCAAACATACCTGGG+TGG 0.772714 7_1:+66787686 None:intergenic
TGAGAGAGGGACTACCACTG+AGG 0.777373 7_1:-66787782 Msa1031990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATGATTATGATTAA+GGG + chr7_1:66786985-66787004 None:intergenic 10.0%
!! TTAACAAAATTAAATAAATC+CGG + chr7_1:66790515-66790534 None:intergenic 10.0%
!! TTATTATGATTATGATTAAG+GGG + chr7_1:66786984-66787003 None:intergenic 15.0%
!! GATTATTATGATTATGATTA+AGG + chr7_1:66786986-66787005 None:intergenic 15.0%
!! AAATTAATTAAATAGTTCAC+TGG + chr7_1:66787377-66787396 None:intergenic 15.0%
!!! AATATTATCAGTTTTATTAG+TGG - chr7_1:66787467-66787486 Msa1031990:CDS 15.0%
!!! ATATTATCAGTTTTATTAGT+GGG - chr7_1:66787468-66787487 Msa1031990:CDS 15.0%
!!! ATTTGATTTATACAGAAAAA+TGG - chr7_1:66787616-66787635 Msa1031990:intron 15.0%
!!! TGACATTTTTAATTAGATTT+GGG - chr7_1:66788348-66788367 Msa1031990:intron 15.0%
!!! TAAGAAGTTTAAATTGTTTT+GGG - chr7_1:66788807-66788826 Msa1031990:CDS 15.0%
!! AATTAAGTAAATTCAAGTAT+TGG - chr7_1:66789691-66789710 Msa1031990:CDS 15.0%
!!! GTCAATAGTTTTTTTTTTTT+TGG - chr7_1:66789790-66789809 Msa1031990:CDS 15.0%
!!! TTTTTAACCTTTATGATAAA+AGG - chr7_1:66789817-66789836 Msa1031990:CDS 15.0%
!! TAACAAAATTAAATAAATCC+GGG + chr7_1:66790514-66790533 None:intergenic 15.0%
!!! GAAATTTTATTATAACATGT+AGG + chr7_1:66791291-66791310 None:intergenic 15.0%
!!! AAAAGGATAATTTTCTATTT+TGG - chr7_1:66791739-66791758 Msa1031990:intron 15.0%
!! CTTTATACCTTAAAATATTA+GGG - chr7_1:66791971-66791990 Msa1031990:intron 15.0%
!! TATTATGATTATGATTAAGG+GGG + chr7_1:66786983-66787002 None:intergenic 20.0%
!!! TTATTTTTTTGTTGAAAGCT+CGG + chr7_1:66787538-66787557 None:intergenic 20.0%
!!! TGACATTTTTAACTAGATTT+AGG - chr7_1:66788301-66788320 Msa1031990:intron 20.0%
!!! ATTTTTAACTAGATTTAGGT+TGG - chr7_1:66788305-66788324 Msa1031990:intron 20.0%
!!! GTGACATTTTTAATTAGATT+TGG - chr7_1:66788347-66788366 Msa1031990:intron 20.0%
!!! GTAAGAAGTTTAAATTGTTT+TGG - chr7_1:66788806-66788825 Msa1031990:CDS 20.0%
!!! AAGAAGTTTAAATTGTTTTG+GGG - chr7_1:66788808-66788827 Msa1031990:CDS 20.0%
!! TTATTGAACATTCATTACAT+TGG - chr7_1:66789296-66789315 Msa1031990:intron 20.0%
!!! ATTTACTTCAACAACTTTTT+GGG + chr7_1:66789492-66789511 None:intergenic 20.0%
!!! TATAGAACCTTTTATCATAA+AGG + chr7_1:66789827-66789846 None:intergenic 20.0%
!!! TCACTTAGTTAATGTTTTTA+TGG - chr7_1:66789881-66789900 Msa1031990:CDS 20.0%
!!! TAATACTCGTTTTGTTTATT+TGG - chr7_1:66790027-66790046 Msa1031990:intron 20.0%
!! GCTTTATACCTTAAAATATT+AGG - chr7_1:66791970-66791989 Msa1031990:intron 20.0%
!! ATTTTCAGATTCAGATCTAA+TGG + chr7_1:66787127-66787146 None:intergenic 25.0%
! GTGTGAATTAACGAAAATTA+TGG + chr7_1:66787180-66787199 None:intergenic 25.0%
! ACGAGTAAAACTAATTGAAT+TGG + chr7_1:66787240-66787259 None:intergenic 25.0%
! TTAATTAAATAGTTCACTGG+AGG + chr7_1:66787374-66787393 None:intergenic 25.0%
!!! GATTTTGTTGTTATTGTTGT+TGG - chr7_1:66787576-66787595 Msa1031990:CDS 25.0%
!!! ATTCGATACTTACTTTTCAA+TGG - chr7_1:66787904-66787923 Msa1031990:intron 25.0%
! GCTTAATGTTTAATGTCATT+GGG - chr7_1:66788241-66788260 Msa1031990:CDS 25.0%
!!! TTAGGTTGGAGTTTTTAATT+AGG - chr7_1:66788319-66788338 Msa1031990:intron 25.0%
!!! TTGGTTTTTGTTGTTGTTTT+TGG - chr7_1:66788436-66788455 Msa1031990:intron 25.0%
!!! TGGTTTTTGTTGTTGTTTTT+GGG - chr7_1:66788437-66788456 Msa1031990:intron 25.0%
!!! TTAGTTTGTCCTTTTTTGTA+TGG - chr7_1:66788509-66788528 Msa1031990:CDS 25.0%
! TAACAAGAACCATACAAAAA+AGG + chr7_1:66788521-66788540 None:intergenic 25.0%
! TTAAACTTCTTACTTGTAGA+CGG + chr7_1:66788799-66788818 None:intergenic 25.0%
!!! AGAAGTTTAAATTGTTTTGG+GGG - chr7_1:66788809-66788828 Msa1031990:CDS 25.0%
!! CATTTACTTCAACAACTTTT+TGG + chr7_1:66789493-66789512 None:intergenic 25.0%
!! ACACTTGTTAATGCTATTAT+AGG + chr7_1:66789720-66789739 None:intergenic 25.0%
! AATTATGTGGTGAAATAAAC+AGG + chr7_1:66789862-66789881 None:intergenic 25.0%
! CATTAACTAAGTGAATTATG+TGG + chr7_1:66789875-66789894 None:intergenic 25.0%
!! GTTTTTATGGTTTCATTTTC+AGG - chr7_1:66789894-66789913 Msa1031990:CDS 25.0%
!! AATTAGTTGGAAGTACAATT+GGG + chr7_1:66790615-66790634 None:intergenic 25.0%
!! AATGATATGGTTGAGTATTT+TGG - chr7_1:66790661-66790680 Msa1031990:intron 25.0%
! CAGCATTCATATCATATATT+TGG - chr7_1:66790979-66790998 Msa1031990:CDS 25.0%
!! ATCTGTTTGATTTACACAAA+AGG - chr7_1:66791722-66791741 Msa1031990:intron 25.0%
! AATAACTGTGTGCAATATTT+AGG - chr7_1:66791769-66791788 Msa1031990:intron 25.0%
! ATTTGGAAAAACAGAAAAGT+GGG + chr7_1:66791849-66791868 None:intergenic 25.0%
! TGCAATATCAATAAAGATTG+TGG + chr7_1:66791893-66791912 None:intergenic 25.0%
!! CAATTCACTATTTTCAAATG+CGG - chr7_1:66791948-66791967 Msa1031990:intron 25.0%
!! AACTATGCCCTAATATTTTA+AGG + chr7_1:66791981-66792000 None:intergenic 25.0%
! CTAATTGAATTGGAGTTGAT+TGG + chr7_1:66787230-66787249 None:intergenic 30.0%
TGTGAATTTAACGAACATGA+AGG + chr7_1:66787298-66787317 None:intergenic 30.0%
! TTCAAGATCGAGTACATTTT+AGG - chr7_1:66787325-66787344 Msa1031990:CDS 30.0%
!! AATTTGCTTTGGAATCATTC+TGG - chr7_1:66787687-66787706 Msa1031990:intron 30.0%
!! ATTTGCTTTGGAATCATTCT+GGG - chr7_1:66787688-66787707 Msa1031990:intron 30.0%
!! AGTAAGTAAAAGTGTTGCTT+GGG + chr7_1:66787808-66787827 None:intergenic 30.0%
!! TAGTAAGTAAAAGTGTTGCT+TGG + chr7_1:66787809-66787828 None:intergenic 30.0%
ATGACATTAAACATTAAGCC+AGG + chr7_1:66788240-66788259 None:intergenic 30.0%
GGCTTAATGTTTAATGTCAT+TGG - chr7_1:66788240-66788259 Msa1031990:CDS 30.0%
!! GTTGGAGTTTTTAATTAGGA+GGG - chr7_1:66788323-66788342 Msa1031990:intron 30.0%
!!! TTTTGATTTGTCTTACAGCT+TGG - chr7_1:66788660-66788679 Msa1031990:intron 30.0%
!! TTGCTTTTAACTACTAATGC+AGG - chr7_1:66788878-66788897 Msa1031990:intron 30.0%
!! TGCTTTTAACTACTAATGCA+GGG - chr7_1:66788879-66788898 Msa1031990:intron 30.0%
GACTAAATCAAATCCATAAG+CGG + chr7_1:66789121-66789140 None:intergenic 30.0%
! TAAGACTCTTGATTTGATCA+AGG - chr7_1:66789149-66789168 Msa1031990:intron 30.0%
CTTAATTTCATCATCCAACT+TGG + chr7_1:66789450-66789469 None:intergenic 30.0%
TGGATGATGAAATTAAGTCA+TGG - chr7_1:66789453-66789472 Msa1031990:CDS 30.0%
AGTTGTTGAAGTAAATGCAT+TGG - chr7_1:66789496-66789515 Msa1031990:CDS 30.0%
GTGAGATGAAATGAAAGAAA+TGG + chr7_1:66789558-66789577 None:intergenic 30.0%
AAAACGAGTATTAGAACAGA+GGG + chr7_1:66790020-66790039 None:intergenic 30.0%
!!! GTTTTGTTTATTTGGATCTG+TGG - chr7_1:66790035-66790054 Msa1031990:intron 30.0%
GACACAATGTCAAATAAACA+AGG + chr7_1:66790293-66790312 None:intergenic 30.0%
AGAGTACATTAAGGCAATTA+AGG - chr7_1:66790353-66790372 Msa1031990:intron 30.0%
TGCTTCAATTGACTAAAAGA+AGG + chr7_1:66790474-66790493 None:intergenic 30.0%
!! AAAGATAGCTTTATTACACC+CGG - chr7_1:66790493-66790512 Msa1031990:intron 30.0%
! AACATCAAGGGCATAAAATA+TGG + chr7_1:66790580-66790599 None:intergenic 30.0%
! CAATTAGTTGGAAGTACAAT+TGG + chr7_1:66790616-66790635 None:intergenic 30.0%
ATTGTACTTCCAACTAATTG+TGG - chr7_1:66790616-66790635 Msa1031990:intron 30.0%
ATTCCTCTGCATAAAAAAAG+AGG + chr7_1:66790644-66790663 None:intergenic 30.0%
! TTTTATGCAGAGGAATGATA+TGG - chr7_1:66790648-66790667 Msa1031990:intron 30.0%
CATTCATTCCATCATTGATA+TGG - chr7_1:66791359-66791378 Msa1031990:intron 30.0%
!! TAAAATGAAATTTTGGGAGG+GGG + chr7_1:66791825-66791844 None:intergenic 30.0%
!! GTAAAATGAAATTTTGGGAG+GGG + chr7_1:66791826-66791845 None:intergenic 30.0%
!! GGTAAAATGAAATTTTGGGA+GGG + chr7_1:66791827-66791846 None:intergenic 30.0%
! GTGGGGTAAAATGAAATTTT+GGG + chr7_1:66791831-66791850 None:intergenic 30.0%
! AGTGGGGTAAAATGAAATTT+TGG + chr7_1:66791832-66791851 None:intergenic 30.0%
TTTGGAAAAACAGAAAAGTG+GGG + chr7_1:66791848-66791867 None:intergenic 30.0%
CATTTGGAAAAACAGAAAAG+TGG + chr7_1:66791850-66791869 None:intergenic 30.0%
CATGATTATTTGCACAAAAC+TGG + chr7_1:66791921-66791940 None:intergenic 30.0%
TTTGCAAGGATATTGTTGAA+AGG - chr7_1:66792038-66792057 Msa1031990:five_prime_UTR 30.0%
TGAAAGGTTAAACGTATAAG+AGG - chr7_1:66792054-66792073 Msa1031990:five_prime_UTR 30.0%
ATCTTCTTCGCTTCTTGTTA+AGG + chr7_1:66786852-66786871 None:intergenic 35.0%
ATGATTATGATTAAGGGGGA+AGG + chr7_1:66786979-66786998 None:intergenic 35.0%
AGTGTTCTTGTTAGGTTTAG+CGG + chr7_1:66787071-66787090 None:intergenic 35.0%
!! GAACTAAGAGTGTTCTTGTT+AGG + chr7_1:66787079-66787098 None:intergenic 35.0%
!! GGAGTATGGATTAGTGATTA+AGG + chr7_1:66787209-66787228 None:intergenic 35.0%
! AATTGGAGTTGATTGGAGTA+TGG + chr7_1:66787223-66787242 None:intergenic 35.0%
GGATTAAGGAATAAGCAACT+AGG + chr7_1:66787353-66787372 None:intergenic 35.0%
AATAGTTCACTGGAGGATTA+AGG + chr7_1:66787367-66787386 None:intergenic 35.0%
AAAATGGCTTCTCACATTGT+TGG - chr7_1:66787632-66787651 Msa1031990:intron 35.0%
GCAAATTTCAACTCTCTCTT+GGG + chr7_1:66787674-66787693 None:intergenic 35.0%
AGCAAATTTCAACTCTCTCT+TGG + chr7_1:66787675-66787694 None:intergenic 35.0%
! GAGAGAGTTGAAATTTGCTT+TGG - chr7_1:66787676-66787695 Msa1031990:intron 35.0%
AGAAACCTTCTTCAAATCCT+CGG + chr7_1:66787729-66787748 None:intergenic 35.0%
!! ACTTACTTTTCAATGGCTAG+AGG - chr7_1:66787911-66787930 Msa1031990:intron 35.0%
TTTGATGAGTTAGTGACTCT+GGG - chr7_1:66788019-66788038 Msa1031990:intron 35.0%
CACTTTATTGTCCCAGAATT+GGG - chr7_1:66788092-66788111 Msa1031990:CDS 35.0%
!!! CGTTTTGTTTTTGCTTATGC+AGG - chr7_1:66788193-66788212 Msa1031990:CDS 35.0%
!! AAATGTTAGCTTTGTTAGCC+TGG - chr7_1:66788219-66788238 Msa1031990:CDS 35.0%
!! ATGTCATTGGGAAGTATTGT+TGG - chr7_1:66788253-66788272 Msa1031990:CDS 35.0%
!! TGTCATTGGGAAGTATTGTT+GGG - chr7_1:66788254-66788273 Msa1031990:CDS 35.0%
!! GGTTGGAGTTTTTAATTAGG+AGG - chr7_1:66788322-66788341 Msa1031990:intron 35.0%
TAGCTTCACTTAGTGGAATA+AGG - chr7_1:66788411-66788430 Msa1031990:intron 35.0%
GAGTTTGAAAGATCTTTGGT+TGG - chr7_1:66788461-66788480 Msa1031990:intron 35.0%
TTTGAAAGATCTTTGGTTGG+TGG - chr7_1:66788464-66788483 Msa1031990:intron 35.0%
TTGAAAGATCTTTGGTTGGT+GGG - chr7_1:66788465-66788484 Msa1031990:intron 35.0%
TCTACTATAATAGACCACAC+AGG + chr7_1:66788591-66788610 None:intergenic 35.0%
AGAGCAACAAGTATGAAACA+GGG + chr7_1:66788713-66788732 None:intergenic 35.0%
AAGCAAAGATAGGAGATCAA+AGG + chr7_1:66788763-66788782 None:intergenic 35.0%
!! TTTTAACTACTAATGCAGGG+AGG - chr7_1:66788882-66788901 Msa1031990:intron 35.0%
! TATGGATTTGATTTAGTCCG+TGG - chr7_1:66789123-66789142 Msa1031990:intron 35.0%
AATCAAGAGTCTTAGTTCCA+CGG + chr7_1:66789143-66789162 None:intergenic 35.0%
CAAAACGAGTATTAGAACAG+AGG + chr7_1:66790021-66790040 None:intergenic 35.0%
ACCCTTTCTATTCAACTTTC+AGG - chr7_1:66790071-66790090 Msa1031990:intron 35.0%
GCCTGAAAGTTGAATAGAAA+GGG + chr7_1:66790075-66790094 None:intergenic 35.0%
AGCCTGAAAGTTGAATAGAA+AGG + chr7_1:66790076-66790095 None:intergenic 35.0%
!! ACTTCTTAGCCTTGAATTCA+CGG + chr7_1:66790242-66790261 None:intergenic 35.0%
GTACATTAAGGCAATTAAGG+AGG - chr7_1:66790356-66790375 Msa1031990:intron 35.0%
GATATTGATGTCCTAGTACA+CGG - chr7_1:66790414-66790433 Msa1031990:intron 35.0%
GTTTCTCTTCAAAACAGAAG+AGG + chr7_1:66790549-66790568 None:intergenic 35.0%
AATCGGCAATCTAACATCAA+GGG + chr7_1:66790592-66790611 None:intergenic 35.0%
! TTGGAAGTACAATTGGGAAT+CGG + chr7_1:66790609-66790628 None:intergenic 35.0%
AAAGAGGATCCACAATTAGT+TGG + chr7_1:66790628-66790647 None:intergenic 35.0%
!!! GATCCTCTTTTTTTATGCAG+AGG - chr7_1:66790638-66790657 Msa1031990:intron 35.0%
! TTTTCCTGTGATGTTACAAG+GGG + chr7_1:66790927-66790946 None:intergenic 35.0%
! CTTTTCCTGTGATGTTACAA+GGG + chr7_1:66790928-66790947 None:intergenic 35.0%
! ACTTTTCCTGTGATGTTACA+AGG + chr7_1:66790929-66790948 None:intergenic 35.0%
AACATGTAGGCAAATAGAGA+AGG + chr7_1:66791278-66791297 None:intergenic 35.0%
ATGAATGATGTCGTTGAAGT+TGG + chr7_1:66791346-66791365 None:intergenic 35.0%
ATCAGCATCCATATCAATGA+TGG + chr7_1:66791370-66791389 None:intergenic 35.0%
! TTTCCTTCAACCTTTTCACT+TGG + chr7_1:66791679-66791698 None:intergenic 35.0%
!! AAAATGAAATTTTGGGAGGG+GGG + chr7_1:66791824-66791843 None:intergenic 35.0%
! GGGTAAAATGAAATTTTGGG+AGG + chr7_1:66791828-66791847 None:intergenic 35.0%
AGAGTCTCATACGAACCTTT+CGG + chr7_1:66786908-66786927 None:intergenic 40.0%
AAAGGGAAGGACGTAAAAGA+GGG + chr7_1:66786940-66786959 None:intergenic 40.0%
AAAAGGGAAGGACGTAAAAG+AGG + chr7_1:66786941-66786960 None:intergenic 40.0%
GAAAATGGGTAGACGGAAAA+GGG + chr7_1:66786957-66786976 None:intergenic 40.0%
GATTAAGGGGGAAGGAAAAT+GGG + chr7_1:66786971-66786990 None:intergenic 40.0%
TGATTAAGGGGGAAGGAAAA+TGG + chr7_1:66786972-66786991 None:intergenic 40.0%
TCGCGATCCAATAGATTAGT+CGG - chr7_1:66787497-66787516 Msa1031990:CDS 40.0%
ATTGTTGGATACCCTCGTAT+GGG - chr7_1:66787647-66787666 Msa1031990:intron 40.0%
ATCAGACATCTGTTTCCAGA+TGG + chr7_1:66787768-66787787 None:intergenic 40.0%
TGGAAACAGATGTCTGATGT+TGG - chr7_1:66787770-66787789 Msa1031990:CDS 40.0%
GGAAACAGATGTCTGATGTT+GGG - chr7_1:66787771-66787790 Msa1031990:CDS 40.0%
GTTTGATGAGTTAGTGACTC+TGG - chr7_1:66788018-66788037 Msa1031990:intron 40.0%
!! CCAATTCTGGGACAATAAAG+TGG + chr7_1:66788094-66788113 None:intergenic 40.0%
CCACTTTATTGTCCCAGAAT+TGG - chr7_1:66788091-66788110 Msa1031990:CDS 40.0%
AGAGTACACAAAGTTCACCT+CGG + chr7_1:66788120-66788139 None:intergenic 40.0%
CTTTGTGTACTCTTCTCACA+AGG - chr7_1:66788127-66788146 Msa1031990:CDS 40.0%
CAAGGCTGTTGAAGAATACA+AGG - chr7_1:66788145-66788164 Msa1031990:CDS 40.0%
TGAAGAATACAAGGAAGCCA+AGG - chr7_1:66788154-66788173 Msa1031990:CDS 40.0%
GAAAAAAACACATACCGCCT+TGG + chr7_1:66788174-66788193 None:intergenic 40.0%
GGGATCGAGTTTGAACATTA+TGG - chr7_1:66788368-66788387 Msa1031990:intron 40.0%
ACTAAGTGAAGCTAGCTACA+TGG + chr7_1:66788405-66788424 None:intergenic 40.0%
! ATGTAGCTAGCTTCACTTAG+TGG - chr7_1:66788404-66788423 Msa1031990:intron 40.0%
CACTTAGTGGAATAAGGCTT+TGG - chr7_1:66788417-66788436 Msa1031990:intron 40.0%
GGGTGAGTTTGAAAGATCTT+TGG - chr7_1:66788457-66788476 Msa1031990:intron 40.0%
TTCTGTTATGTTCACCTGTG+TGG - chr7_1:66788574-66788593 Msa1031990:CDS 40.0%
GAGAGCAACAAGTATGAAAC+AGG + chr7_1:66788714-66788733 None:intergenic 40.0%
AAAGGATTTGTCAACTCCCT+TGG + chr7_1:66788745-66788764 None:intergenic 40.0%
GGAGGTTATTGCTGATCTTA+AGG - chr7_1:66788900-66788919 Msa1031990:intron 40.0%
! GCACTTACACCTTCTTTTGA+AGG - chr7_1:66789015-66789034 Msa1031990:intron 40.0%
ACATGGAGACCTTCAAAAGA+AGG + chr7_1:66789027-66789046 None:intergenic 40.0%
AGTAGGTCTCAACAAGAACA+TGG + chr7_1:66789044-66789063 None:intergenic 40.0%
! ACTCTTGATTTGATCAAGGC+TGG - chr7_1:66789153-66789172 Msa1031990:intron 40.0%
! GCAAAGATCCATTTTCCACT+GGG + chr7_1:66789183-66789202 None:intergenic 40.0%
! AGCAAAGATCCATTTTCCAC+TGG + chr7_1:66789184-66789203 None:intergenic 40.0%
AGTGGAAAATGGATCTTTGC+TGG - chr7_1:66789183-66789202 Msa1031990:intron 40.0%
TCTTGTTAACGAGACCAAGT+TGG - chr7_1:66789433-66789452 Msa1031990:CDS 40.0%
TTTCTTAGCTGCAGACATTG+TGG - chr7_1:66789615-66789634 Msa1031990:intron 40.0%
CATCAGACAATTGTTAGCAG+TGG - chr7_1:66789749-66789768 Msa1031990:CDS 40.0%
!! TGTTTTATTCAGGATCTCCG+AGG - chr7_1:66790329-66790348 Msa1031990:intron 40.0%
TGCCTTAATGTACTCTTCCT+CGG + chr7_1:66790349-66790368 None:intergenic 40.0%
AGATGATTAAAGCTGACCTC+GGG + chr7_1:66790444-66790463 None:intergenic 40.0%
GAGATGATTAAAGCTGACCT+CGG + chr7_1:66790445-66790464 None:intergenic 40.0%
TCTCTTCAAAACAGAAGAGG+CGG + chr7_1:66790546-66790565 None:intergenic 40.0%
GAATCGGCAATCTAACATCA+AGG + chr7_1:66790593-66790612 None:intergenic 40.0%
ACATCACCATAGATGATTGG+TGG + chr7_1:66790757-66790776 None:intergenic 40.0%
CTCACATCACCATAGATGAT+TGG + chr7_1:66790760-66790779 None:intergenic 40.0%
AGAAGACAGTCATTGCCTTT+GGG + chr7_1:66790786-66790805 None:intergenic 40.0%
CAGTAAGCATTCCCTTCATT+GGG + chr7_1:66790840-66790859 None:intergenic 40.0%
TTTCCTGTGATGTTACAAGG+GGG + chr7_1:66790926-66790945 None:intergenic 40.0%
CCTTAATAGCCAAAGCAATC+TGG + chr7_1:66791053-66791072 None:intergenic 40.0%
CCAGATTGCTTTGGCTATTA+AGG - chr7_1:66791050-66791069 Msa1031990:CDS 40.0%
GAAGTTGAAGACCTTGAGAA+AGG - chr7_1:66791075-66791094 Msa1031990:CDS 40.0%
!! TGGTGTCATCCAAATTGATG+AGG - chr7_1:66791104-66791123 Msa1031990:CDS 40.0%
TCAAAGCAGCCTCATCAATT+TGG + chr7_1:66791116-66791135 None:intergenic 40.0%
TCCTTCAGAATCACCAATGT+CGG - chr7_1:66791195-66791214 Msa1031990:CDS 40.0%
! ATAGAAGCTTTTCGTCGGAA+CGG + chr7_1:66791413-66791432 None:intergenic 40.0%
! GACTGATAGAAGCTTTTCGT+CGG + chr7_1:66791418-66791437 None:intergenic 40.0%
TTCCGTGAAGGAGTTGTTTA+TGG - chr7_1:66791438-66791457 Msa1031990:intron 40.0%
CACCATAAACAACTCCTTCA+CGG + chr7_1:66791443-66791462 None:intergenic 40.0%
! GTTGTTTATGGTGCTGGAAT+TGG - chr7_1:66791450-66791469 Msa1031990:intron 40.0%
AAGCATCTTGTTGATCCTGT+CGG + chr7_1:66791529-66791548 None:intergenic 40.0%
! TCCTTGAGAAGAACGTTTTG+TGG - chr7_1:66791553-66791572 Msa1031990:intron 40.0%
! CCTTGAGAAGAACGTTTTGT+GGG - chr7_1:66791554-66791573 Msa1031990:intron 40.0%
AAAAACCCGTAAGTACACAG+AGG - chr7_1:66791596-66791615 Msa1031990:intron 40.0%
CTTAACCTCTGTGTACTTAC+GGG + chr7_1:66791604-66791623 None:intergenic 40.0%
GCTTAACCTCTGTGTACTTA+CGG + chr7_1:66791605-66791624 None:intergenic 40.0%
! AAGCTCGTTACGGATTTGTT+TGG + chr7_1:66791655-66791674 None:intergenic 40.0%
TTGCCAAGTGAAAAGGTTGA+AGG - chr7_1:66791673-66791692 Msa1031990:intron 40.0%
GACAATATCCTTGGAAACCA+TGG + chr7_1:66792009-66792028 None:intergenic 40.0%
CCAAGATGTGACAATATCCT+TGG + chr7_1:66792018-66792037 None:intergenic 40.0%
CCAAGGATATTGTCACATCT+TGG - chr7_1:66792015-66792034 Msa1031990:intron 40.0%
!! TTGTCACATCTTGGTTTGCA+AGG - chr7_1:66792024-66792043 Msa1031990:intron 40.0%
TCCTCTACACTAACACCGAA+AGG - chr7_1:66786890-66786909 Msa1031990:three_prime_UTR 45.0%
!! ACCTTTCGGTGTTAGTGTAG+AGG + chr7_1:66786894-66786913 None:intergenic 45.0%
GGAAAATGGGTAGACGGAAA+AGG + chr7_1:66786958-66786977 None:intergenic 45.0%
GTTCTTGTTAGGTTTAGCGG+TGG + chr7_1:66787068-66787087 None:intergenic 45.0%
CTAAGGGCCGACTAATCTAT+TGG + chr7_1:66787507-66787526 None:intergenic 45.0%
! CAATAGATTAGTCGGCCCTT+AGG - chr7_1:66787505-66787524 Msa1031990:CDS 45.0%
AAGCTCGGTATCAGACCTAA+GGG + chr7_1:66787523-66787542 None:intergenic 45.0%
AAAGCTCGGTATCAGACCTA+AGG + chr7_1:66787524-66787543 None:intergenic 45.0%
CATTGTTGGATACCCTCGTA+TGG - chr7_1:66787646-66787665 Msa1031990:intron 45.0%
!! CTGATCTAAGAGCATCCATC+TGG - chr7_1:66787750-66787769 Msa1031990:CDS 45.0%
ACTTGGTCATCTCCATAGCA+GGG + chr7_1:66787949-66787968 None:intergenic 45.0%
CATCGCAGTCACTTACTAGT+TGG + chr7_1:66787981-66788000 None:intergenic 45.0%
! GACTCTGGGTTGTATTGATC+TGG - chr7_1:66788033-66788052 Msa1031990:CDS 45.0%
GAGTACACAAAGTTCACCTC+GGG + chr7_1:66788119-66788138 None:intergenic 45.0%
AGAATACAAGGAAGCCAAGG+CGG - chr7_1:66788157-66788176 Msa1031990:CDS 45.0%
ACTGTTGCCAAGTGAATGCT+TGG - chr7_1:66788541-66788560 Msa1031990:CDS 45.0%
TACTCTGCCAAGCATTCACT+TGG + chr7_1:66788551-66788570 None:intergenic 45.0%
TGAAACAGGGCCAACAAGAA+CGG + chr7_1:66788700-66788719 None:intergenic 45.0%
TCTCCTATCTTTGCTTCCCA+AGG - chr7_1:66788767-66788786 Msa1031990:CDS 45.0%
CTTCTTACTTGTAGACGGCA+AGG + chr7_1:66788794-66788813 None:intergenic 45.0%
ATTGCTGATCTTAAGGCAGC+TGG - chr7_1:66788907-66788926 Msa1031990:intron 45.0%
TCAAGATCCAGGACAAGTGT+GGG + chr7_1:66788958-66788977 None:intergenic 45.0%
TTCAAGATCCAGGACAAGTG+TGG + chr7_1:66788959-66788978 None:intergenic 45.0%
ACTTGTGAGCTTCAAGATCC+AGG + chr7_1:66788969-66788988 None:intergenic 45.0%
AAGACCCTCACATCTTTGAG+TGG - chr7_1:66789090-66789109 Msa1031990:intron 45.0%
GACACCACTCAAAGATGTGA+GGG + chr7_1:66789097-66789116 None:intergenic 45.0%
CTGGATTTCCCAGTGGAAAA+TGG - chr7_1:66789172-66789191 Msa1031990:intron 45.0%
ATCTTTGCTGGAGTCGTTGA+TGG - chr7_1:66789195-66789214 Msa1031990:intron 45.0%
! TCGTTGATGGAAGGAACATC+TGG - chr7_1:66789208-66789227 Msa1031990:intron 45.0%
! CGTTGATGGAAGGAACATCT+GGG - chr7_1:66789209-66789228 Msa1031990:intron 45.0%
CATCTGGGCAAATGATCTTG+AGG - chr7_1:66789224-66789243 Msa1031990:intron 45.0%
GGCTTCTCTCAGTACATTAG+AGG - chr7_1:66789245-66789264 Msa1031990:intron 45.0%
AGTACATTAGAGGCTCTTGC+CGG - chr7_1:66789255-66789274 Msa1031990:intron 45.0%
AATACCTTTGCCCACAATGC+CGG + chr7_1:66789277-66789296 None:intergenic 45.0%
TAATGCACTTGCAGGCAACA+AGG - chr7_1:66789520-66789539 Msa1031990:CDS 45.0%
TGCAGAACTTGCAGAGAAGA+TGG + chr7_1:66789920-66789939 None:intergenic 45.0%
TTTCAGGCTGCTGCATTGAA+GGG - chr7_1:66790087-66790106 Msa1031990:intron 45.0%
!! TGGCACTGACATTAGTAGCA+CGG + chr7_1:66790125-66790144 None:intergenic 45.0%
TACTAATGTCAGTGCCAGGT+TGG - chr7_1:66790128-66790147 Msa1031990:intron 45.0%
! CTTTTGTTGAGCATCCAACC+TGG + chr7_1:66790145-66790164 None:intergenic 45.0%
!! ATGATCCAATGGTGGTGGTT+GGG + chr7_1:66790188-66790207 None:intergenic 45.0%
!! AATGATCCAATGGTGGTGGT+TGG + chr7_1:66790189-66790208 None:intergenic 45.0%
! CTCCGAGGAAGAGTACATTA+AGG - chr7_1:66790344-66790363 Msa1031990:intron 45.0%
CTTGAAGCTCAACAACTGAG+CGG + chr7_1:66790386-66790405 None:intergenic 45.0%
!!! TATTTTGGCGAGCAGTTGTC+AGG - chr7_1:66790676-66790695 Msa1031990:intron 45.0%
TCGCCTTTACTGCTAATGGA+TGG - chr7_1:66790701-66790720 Msa1031990:intron 45.0%
! CGCCTTTACTGCTAATGGAT+GGG - chr7_1:66790702-66790721 Msa1031990:intron 45.0%
CACCCATCCATTAGCAGTAA+AGG + chr7_1:66790707-66790726 None:intergenic 45.0%
AATGGATGGGTGCAATCCTA+TGG - chr7_1:66790715-66790734 Msa1031990:intron 45.0%
CTTGACACAACGAGATCCAT+AGG + chr7_1:66790734-66790753 None:intergenic 45.0%
GTCAAGCCACCAATCATCTA+TGG - chr7_1:66790748-66790767 Msa1031990:intron 45.0%
CAGAAGACAGTCATTGCCTT+TGG + chr7_1:66790787-66790806 None:intergenic 45.0%
CAAAGGCAATGACTGTCTTC+TGG - chr7_1:66790785-66790804 Msa1031990:CDS 45.0%
TTTACCAAGCGCCCAATGAA+GGG - chr7_1:66790826-66790845 Msa1031990:CDS 45.0%
CCAGTAAGCATTCCCTTCAT+TGG + chr7_1:66790841-66790860 None:intergenic 45.0%
CCAATGAAGGGAATGCTTAC+TGG - chr7_1:66790838-66790857 Msa1031990:intron 45.0%
ACCAGTTGAGAATGGTGACA+GGG + chr7_1:66790864-66790883 None:intergenic 45.0%
AACGAAGGACCAGTTGAGAA+TGG + chr7_1:66790872-66790891 None:intergenic 45.0%
TTCCTGTGATGTTACAAGGG+GGG + chr7_1:66790925-66790944 None:intergenic 45.0%
GTTGAAGACCTTGAGAAAGG+TGG - chr7_1:66791078-66791097 Msa1031990:CDS 45.0%
GACCTTGAGAAAGGTGGTAT+TGG - chr7_1:66791084-66791103 Msa1031990:CDS 45.0%
CACCAATACCACCTTTCTCA+AGG + chr7_1:66791089-66791108 None:intergenic 45.0%
! CATTGGTGATTCTGAAGGAG+TGG + chr7_1:66791194-66791213 None:intergenic 45.0%
! ACCGACATTGGTGATTCTGA+AGG + chr7_1:66791199-66791218 None:intergenic 45.0%
! AATCACCAATGTCGGTGTTC+AGG - chr7_1:66791203-66791222 Msa1031990:CDS 45.0%
CTTGTGAGCCAAACATACCT+GGG + chr7_1:66791235-66791254 None:intergenic 45.0%
ACTTGTGAGCCAAACATACC+TGG + chr7_1:66791236-66791255 None:intergenic 45.0%
! TAGAAGCTTTTCGTCGGAAC+GGG + chr7_1:66791412-66791431 None:intergenic 45.0%
CTTCTATCAGTCTTCCGTGA+AGG - chr7_1:66791426-66791445 Msa1031990:intron 45.0%
GAAGGAGTTGTTTATGGTGC+TGG - chr7_1:66791444-66791463 Msa1031990:intron 45.0%
AGTGGATGTCATACACACCA+GGG + chr7_1:66791476-66791495 None:intergenic 45.0%
CCCACAAAACGTTCTTCTCA+AGG + chr7_1:66791557-66791576 None:intergenic 45.0%
TTCACTTGGCAAGCTCGTTA+CGG + chr7_1:66791665-66791684 None:intergenic 45.0%
AACGAGCTTGCCAAGTGAAA+AGG - chr7_1:66791666-66791685 Msa1031990:intron 45.0%
TCCAAATGTCTCTGTATCCG+TGG - chr7_1:66791862-66791881 Msa1031990:intron 45.0%
TAAAGATTGTGGCAGAGCCA+CGG + chr7_1:66791882-66791901 None:intergenic 45.0%
ATGGGTAGACGGAAAAGGGA+AGG + chr7_1:66786953-66786972 None:intergenic 50.0%
GGGGAAGGAAAATGGGTAGA+CGG + chr7_1:66786964-66786983 None:intergenic 50.0%
GTTTAGCGGTGGATCTAGAG+TGG + chr7_1:66787057-66787076 None:intergenic 50.0%
! CAGTGCCGAGGATTTGAAGA+AGG - chr7_1:66787721-66787740 Msa1031990:CDS 50.0%
CTTGATACTACCGCCACTCT+TGG - chr7_1:66787839-66787858 Msa1031990:CDS 50.0%
CACTTGGTCATCTCCATAGC+AGG + chr7_1:66787950-66787969 None:intergenic 50.0%
CTGCTATGGAGATGACCAAG+TGG - chr7_1:66787948-66787967 Msa1031990:intron 50.0%
!! CTAGTTGGTGTCGAACCACT+TGG + chr7_1:66787966-66787985 None:intergenic 50.0%
GACACTGTTCCCGTTCTTGT+TGG - chr7_1:66788687-66788706 Msa1031990:CDS 50.0%
GAAACAGGGCCAACAAGAAC+GGG + chr7_1:66788699-66788718 None:intergenic 50.0%
GGATTTGTCAACTCCCTTGG+CGG + chr7_1:66788742-66788761 None:intergenic 50.0%
GGACCTTGGGAAGCAAAGAT+AGG + chr7_1:66788773-66788792 None:intergenic 50.0%
TTGTAGACGGCAAGGACCTT+GGG + chr7_1:66788786-66788805 None:intergenic 50.0%
TGATGAACCCACACTTGTCC+TGG - chr7_1:66788948-66788967 Msa1031990:CDS 50.0%
AGCGGGAATATCAGCGAAGT+AGG + chr7_1:66789061-66789080 None:intergenic 50.0%
CGACACCACTCAAAGATGTG+AGG + chr7_1:66789098-66789117 None:intergenic 50.0%
ATCAAGGCTGGATTTCCCAG+TGG - chr7_1:66789165-66789184 Msa1031990:intron 50.0%
! TTGCTGGAGTCGTTGATGGA+AGG - chr7_1:66789199-66789218 Msa1031990:intron 50.0%
GTGAAGAAGTGAGCAGGAAG+TGG + chr7_1:66789402-66789421 None:intergenic 50.0%
AGCAGTGTGAAGAAGTGAGC+AGG + chr7_1:66789408-66789427 None:intergenic 50.0%
CTCACTTCTTCACACTGCTG+TGG - chr7_1:66789409-66789428 Msa1031990:CDS 50.0%
!! GCATTGGCTAATGCACTTGC+AGG - chr7_1:66789512-66789531 Msa1031990:CDS 50.0%
ACTTGCAGGCAACAAGGATG+AGG - chr7_1:66789526-66789545 Msa1031990:CDS 50.0%
CTCGTTAGTCACTCTTGGAG+AGG + chr7_1:66789962-66789981 None:intergenic 50.0%
CTCTCCAAGAGTGACTAACG+AGG - chr7_1:66789960-66789979 Msa1031990:CDS 50.0%
ACAGCCTCGTTAGTCACTCT+TGG + chr7_1:66789967-66789986 None:intergenic 50.0%
GACTAACGAGGCTGTTCAGA+AGG - chr7_1:66789972-66789991 Msa1031990:CDS 50.0%
CTTTCAGGCTGCTGCATTGA+AGG - chr7_1:66790086-66790105 Msa1031990:intron 50.0%
TGACATTAGTAGCACGGCGA+TGG + chr7_1:66790119-66790138 None:intergenic 50.0%
! GTGCTACTAATGTCAGTGCC+AGG - chr7_1:66790124-66790143 Msa1031990:intron 50.0%
GGCTTCGCCTTTACTGCTAA+TGG - chr7_1:66790697-66790716 Msa1031990:intron 50.0%
AGACAGTCATTGCCTTTGGG+CGG + chr7_1:66790783-66790802 None:intergenic 50.0%
CTTTACCAAGCGCCCAATGA+AGG - chr7_1:66790825-66790844 Msa1031990:CDS 50.0%
GACCAGTTGAGAATGGTGAC+AGG + chr7_1:66790865-66790884 None:intergenic 50.0%
! AGGCTGGTCAACTCTAACGA+AGG + chr7_1:66790887-66790906 None:intergenic 50.0%
TCGTTAGAGTTGACCAGCCT+AGG - chr7_1:66790887-66790906 Msa1031990:intron 50.0%
GGTCGAGTTTATACCTAGGC+TGG + chr7_1:66790903-66790922 None:intergenic 50.0%
TCCTGTGATGTTACAAGGGG+GGG + chr7_1:66790924-66790943 None:intergenic 50.0%
GACCTGCTACCAGATTGCTT+TGG - chr7_1:66791041-66791060 Msa1031990:CDS 50.0%
AGCCAAAGCAATCTGGTAGC+AGG + chr7_1:66791046-66791065 None:intergenic 50.0%
!! TGATGAGGCTGCTTTGAGAG+AGG - chr7_1:66791119-66791138 Msa1031990:CDS 50.0%
!! GATGAGGCTGCTTTGAGAGA+GGG - chr7_1:66791120-66791139 Msa1031990:CDS 50.0%
TGGAGTAGCACATGTGAGTG+TGG + chr7_1:66791326-66791345 None:intergenic 50.0%
GAGTGGATGTCATACACACC+AGG + chr7_1:66791477-66791496 None:intergenic 50.0%
!! GTCAGTTGGTGGGATTCTTG+GGG + chr7_1:66791499-66791518 None:intergenic 50.0%
!! CGTCAGTTGGTGGGATTCTT+GGG + chr7_1:66791500-66791519 None:intergenic 50.0%
!! TCGTCAGTTGGTGGGATTCT+TGG + chr7_1:66791501-66791520 None:intergenic 50.0%
!!! GGGTTTTTAGCCCACAGTCA+GGG + chr7_1:66791584-66791603 None:intergenic 50.0%
TGCAGCAACCATGTTGAGGA+GGG + chr7_1:66791631-66791650 None:intergenic 50.0%
GCCACGGATACAGAGACATT+TGG + chr7_1:66791866-66791885 None:intergenic 50.0%
TAGGGCATAGTTTCACGCCA+TGG - chr7_1:66791989-66792008 Msa1031990:intron 50.0%
GTTTCACGCCATGGTTTCCA+AGG - chr7_1:66791998-66792017 Msa1031990:intron 50.0%
CTCTCTTGGGTCCCATACGA+GGG + chr7_1:66787661-66787680 None:intergenic 55.0%
TCTCTCTTGGGTCCCATACG+AGG + chr7_1:66787662-66787681 None:intergenic 55.0%
GGACAAAAAGAGCAGTGCCG+AGG - chr7_1:66787709-66787728 Msa1031990:CDS 55.0%
CCATCCATACCTGGGTGGAA+CGG + chr7_1:66787867-66787886 None:intergenic 55.0%
CCACCAGTCCATCCATACCT+GGG + chr7_1:66787875-66787894 None:intergenic 55.0%
ACCACCAGTCCATCCATACC+TGG + chr7_1:66787876-66787895 None:intergenic 55.0%
!! GGATGGACTGGTGGTGAGAT+TGG - chr7_1:66787881-66787900 Msa1031990:CDS 55.0%
TAATGCCACCGTCCCTGCTA+TGG - chr7_1:66787934-66787953 Msa1031990:intron 55.0%
GGTCATCTCCATAGCAGGGA+CGG + chr7_1:66787945-66787964 None:intergenic 55.0%
TCACCTCGGGACCCAATTCT+GGG + chr7_1:66788106-66788125 None:intergenic 55.0%
TTCACCTCGGGACCCAATTC+TGG + chr7_1:66788107-66788126 None:intergenic 55.0%
TTGCTCTCCAAAGCCGCCAA+GGG - chr7_1:66788726-66788745 Msa1031990:CDS 55.0%
CTTGTAGACGGCAAGGACCT+TGG + chr7_1:66788787-66788806 None:intergenic 55.0%
CTTCGCTGATATTCCCGCTG+AGG - chr7_1:66789062-66789081 Msa1031990:intron 55.0%
! AGGGTCTTGTATGCCTCAGC+GGG + chr7_1:66789078-66789097 None:intergenic 55.0%
! GAGGGTCTTGTATGCCTCAG+CGG + chr7_1:66789079-66789098 None:intergenic 55.0%
!! TTGAGTGGTGTCGCCGCTTA+TGG - chr7_1:66789105-66789124 Msa1031990:intron 55.0%
CTCTGCAAGTTCTGCAGCTC+AGG - chr7_1:66789924-66789943 Msa1031990:CDS 55.0%
GTTCTGCAGCTCAGGCTTCA+AGG - chr7_1:66789932-66789951 Msa1031990:CDS 55.0%
!! ATGGTGGTGGTTGGGAGGAT+TGG + chr7_1:66790180-66790199 None:intergenic 55.0%
ATCCTCCCAACCACCACCAT+TGG - chr7_1:66790180-66790199 Msa1031990:CDS 55.0%
!! ATCCAATGGTGGTGGTTGGG+AGG + chr7_1:66790185-66790204 None:intergenic 55.0%
GGGGAATGATCCAATGGTGG+TGG + chr7_1:66790193-66790212 None:intergenic 55.0%
CTGGGGGAATGATCCAATGG+TGG + chr7_1:66790196-66790215 None:intergenic 55.0%
GGTCTGGGGGAATGATCCAA+TGG + chr7_1:66790199-66790218 None:intergenic 55.0%
TCCTTAGTTCCACGGTCTGG+GGG + chr7_1:66790212-66790231 None:intergenic 55.0%
CTCCTTAGTTCCACGGTCTG+GGG + chr7_1:66790213-66790232 None:intergenic 55.0%
CCTCCTTAGTTCCACGGTCT+GGG + chr7_1:66790214-66790233 None:intergenic 55.0%
CCAGACCGTGGAACTAAGGA+GGG - chr7_1:66790212-66790231 Msa1031990:CDS 55.0%
GCGAACCCTCCTTAGTTCCA+CGG + chr7_1:66790220-66790239 None:intergenic 55.0%
GAGGGTTCGCCGTGAATTCA+AGG - chr7_1:66790230-66790249 Msa1031990:CDS 55.0%
CATTCCCTTCATTGGGCGCT+TGG + chr7_1:66790833-66790852 None:intergenic 55.0%
GCCCTGTCACCATTCTCAAC+TGG - chr7_1:66790860-66790879 Msa1031990:intron 55.0%
GGGGGGTCGAGTTTATACCT+AGG + chr7_1:66790907-66790926 None:intergenic 55.0%
ACCCCCCCTTGTAACATCAC+AGG - chr7_1:66790920-66790939 Msa1031990:intron 55.0%
TGAGAGAGGGACTACCACTG+AGG - chr7_1:66791133-66791152 Msa1031990:CDS 55.0%
GTCCAAGTAGTGAGCGTGCT+CGG + chr7_1:66791163-66791182 None:intergenic 55.0%
AGCACGCTCACTACTTGGAC+TGG - chr7_1:66791163-66791182 Msa1031990:CDS 55.0%
GCACGCTCACTACTTGGACT+GGG - chr7_1:66791164-66791183 Msa1031990:CDS 55.0%
GGAGTCCTGAACACCGACAT+TGG + chr7_1:66791211-66791230 None:intergenic 55.0%
GGACTCCACCCAGGTATGTT+TGG - chr7_1:66791224-66791243 Msa1031990:CDS 55.0%
GTGAGCCAAACATACCTGGG+TGG + chr7_1:66791232-66791251 None:intergenic 55.0%
! TATGGTGCTGGAATTGGCCC+TGG - chr7_1:66791456-66791475 Msa1031990:intron 55.0%
TTGGTGGGATTCTTGGGGAG+TGG + chr7_1:66791494-66791513 None:intergenic 55.0%
TTGTGGGTCAACCCTGACTG+TGG - chr7_1:66791570-66791589 Msa1031990:intron 55.0%
TGTGGGTCAACCCTGACTGT+GGG - chr7_1:66791571-66791590 Msa1031990:intron 55.0%
!!! CGGGTTTTTAGCCCACAGTC+AGG + chr7_1:66791585-66791604 None:intergenic 55.0%
TAAGCCTGCCCTCCTCAACA+TGG - chr7_1:66791620-66791639 Msa1031990:intron 55.0%
CTGCAGCAACCATGTTGAGG+AGG + chr7_1:66791632-66791651 None:intergenic 55.0%
TGGCTGCAGCAACCATGTTG+AGG + chr7_1:66791635-66791654 None:intergenic 55.0%
CCGTTCCACCCAGGTATGGA+TGG - chr7_1:66787864-66787883 Msa1031990:CDS 60.0%
CCAGTCCATCCATACCTGGG+TGG + chr7_1:66787872-66787891 None:intergenic 60.0%
CCACCCAGGTATGGATGGAC+TGG - chr7_1:66787869-66787888 Msa1031990:CDS 60.0%
!! CCCAGGTATGGATGGACTGG+TGG - chr7_1:66787872-66787891 Msa1031990:CDS 60.0%
CATCTCCATAGCAGGGACGG+TGG + chr7_1:66787942-66787961 None:intergenic 60.0%
TGTCCCAGAATTGGGTCCCG+AGG - chr7_1:66788100-66788119 Msa1031990:CDS 60.0%
GTTGCTCTCCAAAGCCGCCA+AGG - chr7_1:66788725-66788744 Msa1031990:CDS 60.0%
GTCAACTCCCTTGGCGGCTT+TGG + chr7_1:66788736-66788755 None:intergenic 60.0%
AGAGGCTCTTGCCGGCATTG+TGG - chr7_1:66789263-66789282 Msa1031990:intron 60.0%
GAGGCTCTTGCCGGCATTGT+GGG - chr7_1:66789264-66789283 Msa1031990:intron 60.0%
CTTGCCGGCATTGTGGGCAA+AGG - chr7_1:66789270-66789289 Msa1031990:intron 60.0%
TGGATCATTCCCCCAGACCG+TGG - chr7_1:66790200-66790219 Msa1031990:CDS 60.0%
TCCCCCAGACCGTGGAACTA+AGG - chr7_1:66790208-66790227 Msa1031990:CDS 60.0%
CCCAGACCGTGGAACTAAGG+AGG - chr7_1:66790211-66790230 Msa1031990:CDS 60.0%
CCCTCCTTAGTTCCACGGTC+TGG + chr7_1:66790215-66790234 None:intergenic 60.0%
! TGGTGATGTGAGCCGCCCAA+AGG - chr7_1:66790768-66790787 Msa1031990:CDS 60.0%
GTCCGAGCACGCTCACTACT+TGG - chr7_1:66791158-66791177 Msa1031990:CDS 60.0%
CGGCGATCTCGTCAGTTGGT+GGG + chr7_1:66791509-66791528 None:intergenic 60.0%
TCGGCGATCTCGTCAGTTGG+TGG + chr7_1:66791510-66791529 None:intergenic 60.0%
CTGTCGGCGATCTCGTCAGT+TGG + chr7_1:66791513-66791532 None:intergenic 60.0%
CAACTGACGAGATCGCCGAC+AGG - chr7_1:66791511-66791530 Msa1031990:intron 60.0%
GCAACCATGTTGAGGAGGGC+AGG + chr7_1:66791627-66791646 None:intergenic 60.0%
TGGAACGGCGCCAAGAGTGG+CGG + chr7_1:66787852-66787871 None:intergenic 65.0%
CCTCGGGCTCTCCGTGTACT+AGG + chr7_1:66790428-66790447 None:intergenic 65.0%
CCTAGTACACGGAGAGCCCG+AGG - chr7_1:66790425-66790444 Msa1031990:intron 65.0%
GCGTGCTCGGACTTCCTCAG+TGG + chr7_1:66791150-66791169 None:intergenic 65.0%
CGGTGTTCAGGACTCCACCC+AGG - chr7_1:66791215-66791234 Msa1031990:CDS 65.0%
GGGTGGAACGGCGCCAAGAG+TGG + chr7_1:66787855-66787874 None:intergenic 70.0%
CTCTTGGCGCCGTTCCACCC+AGG - chr7_1:66787855-66787874 Msa1031990:CDS 70.0%
GGCGCCGTTCCACCCAGGTA+TGG - chr7_1:66787860-66787879 Msa1031990:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 66786822 66792115 66786822 ID=Msa1031990;Name=Msa1031990
chr7_1 mRNA 66786822 66792115 66786822 ID=Msa1031990-mRNA-1;Parent=Msa1031990;Name=Msa1031990-mRNA-1;_AED=0.11;_eAED=0.11;_QI=94|1|1|1|0.90|0.83|12|432|763
chr7_1 exon 66786822 66787616 66786822 ID=Msa1031990-mRNA-1:exon:15188;Parent=Msa1031990-mRNA-1
chr7_1 exon 66787701 66787902 66787701 ID=Msa1031990-mRNA-1:exon:15187;Parent=Msa1031990-mRNA-1
chr7_1 exon 66788029 66788279 66788029 ID=Msa1031990-mRNA-1:exon:15186;Parent=Msa1031990-mRNA-1
chr7_1 exon 66788491 66788596 66788491 ID=Msa1031990-mRNA-1:exon:15185;Parent=Msa1031990-mRNA-1
chr7_1 exon 66788678 66788844 66788678 ID=Msa1031990-mRNA-1:exon:15184;Parent=Msa1031990-mRNA-1
chr7_1 exon 66788941 66789021 66788941 ID=Msa1031990-mRNA-1:exon:15183;Parent=Msa1031990-mRNA-1
chr7_1 exon 66789390 66789553 66789390 ID=Msa1031990-mRNA-1:exon:15182;Parent=Msa1031990-mRNA-1
chr7_1 exon 66789646 66790037 66789646 ID=Msa1031990-mRNA-1:exon:15181;Parent=Msa1031990-mRNA-1
chr7_1 exon 66790132 66790259 66790132 ID=Msa1031990-mRNA-1:exon:15180;Parent=Msa1031990-mRNA-1
chr7_1 exon 66790759 66790846 66790759 ID=Msa1031990-mRNA-1:exon:15179;Parent=Msa1031990-mRNA-1
chr7_1 exon 66790953 66791306 66790953 ID=Msa1031990-mRNA-1:exon:15178;Parent=Msa1031990-mRNA-1
chr7_1 exon 66792026 66792115 66792026 ID=Msa1031990-mRNA-1:exon:15177;Parent=Msa1031990-mRNA-1
chr7_1 five_prime_UTR 66792026 66792115 66792026 ID=Msa1031990-mRNA-1:five_prime_utr;Parent=Msa1031990-mRNA-1
chr7_1 five_prime_UTR 66791303 66791306 66791303 ID=Msa1031990-mRNA-1:five_prime_utr;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66790953 66791302 66790953 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66790759 66790846 66790759 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66790132 66790259 66790132 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66789646 66790037 66789646 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66789390 66789553 66789390 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66788941 66789021 66788941 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66788678 66788844 66788678 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66788491 66788596 66788491 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66788029 66788279 66788029 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66787701 66787902 66787701 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 CDS 66787254 66787616 66787254 ID=Msa1031990-mRNA-1:cds;Parent=Msa1031990-mRNA-1
chr7_1 three_prime_UTR 66786822 66787253 66786822 ID=Msa1031990-mRNA-1:three_prime_utr;Parent=Msa1031990-mRNA-1
Gene Sequence

>Msa1031990

ATGGCTTCTCACATTGTTGGATACCCTCGTATGGGACCCAAGAGAGAGTTGAAATTTGCTTTGGAATCATTCTGGGACAAAAAGAGCAGTGCCGAGGATTTGAAGAAGGTTTCTGCTGATCTAAGAGCATCCATCTGGAAACAGATGTCTGATGTTGGGATCAAGTATATCCCAAGCAACACTTTTACTTACTATGATCATGTACTTGATACTACCGCCACTCTTGGCGCCGTTCCACCCAGGTATGGATGGACTGGTGGTGAGATTGGATTCGATACTTACTTTTCAATGGCTAGAGGTAATGCCACCGTCCCTGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCAGAATTGGGTCCCGAGGTGAACTTTGTGTACTCTTCTCACAAGGCTGTTGAAGAATACAAGGAAGCCAAGGCGCTTGGAGTAGACACTGTTCCCGTTCTTGTTGGCCCTGTTTCATACTTGTTGCTCTCCAAAGCCGCCAAGGGAGTTGACAAATCCTTTGATCTCCTATCTTTGCTTCCCAAGGTCCTTGCCGTCTACAAGGAGGTTATTGCTGATCTTAAGGCAGCTGGTGCTCAGTTTATTCAATTTGATGAACCCACACTTGTCCTGGATCTTGAAGCTCACAAGTTACAAGCATTTACTGATGCATATGCAGCACTTACACCTTCTTTTGAAGGTCTCCATGTTCTTGTTGAGACCTACTTCGCTGATATTCCCGCTGAGGCATACAAGACCCTCACATCTTTGAGTGGTGTCGCCGCTTATGGATTTGATTTAGTCCGTGGAACTAAGACTCTTGATTTGATCAAGGCTGGATTTCCCAGTGGAAAATGGATCTTTGCTGGAGTCGTTGATGGAAGGAACATCTGGGCAAATGATCTTGAGGCTTCTCTCAGTACATTAGAGGCTCTTGCCGGCATTGTGGGCAAAGAGAGAATTGTTGTGTCCACTTCCTGCTCACTTCTTCACACTGCTGTGGATCTTGTTAACGAGACCAAGTTGGATGATGAAATTAAGTCATGGTTAGCTTTTGCTGCCCAAAAAGTTGTTGAAGTAAATGCATTGGCTAATGCACTTGCAGGCAACAAGGATGAGGCCATCTTCTCTGCAAGTTCTGCAGCTCAGGCTTCAAGGAAGTCCTCTCCAAGAGTGACTAACGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCAGACCATCGCCGTGCTACTAATGTCAGTGCCAGGTTGGATGCTCAACAAAAGAAGCTTAATCTTCCAATCCTCCCAACCACCACCATTGGATCATTCCCCCAGACCGTGGAACTAAGGAGGGTTCGCCGTGAATTCAAGGCTAAGAAGATCTCCGAGGAAGAGTACATTAAGGCAATTAAGGAGGAAATCCGCTCAGTTGTTGAGCTTCAAGAAGAGCTTGATATTGATGTCCTAGTACACGGAGAGCCCGAGAGGAATGATATGGTTGAGTATTTTGGCGAGCAGTTGTCAGGCTTCGCCTTTACTGCTAATGGATGGGTGCAATCCTATGGATCTCGTTGTGTCAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAGGCAATGACTGTCTTCTGGTCAGCTCTTGCTCAGAGCTTTACCAAGCGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTCGTTAGAGTTGACCAGCCTAGATCTGAGACCTGCTACCAGATTGCTTTGGCTATTAAGGATGAAGTTGAAGACCTTGAGAAAGGTGGTATTGGTGTCATCCAAATTGATGAGGCTGCTTTGAGAGAGGGACTACCACTGAGGAAGTCCGAGCACGCTCACTACTTGGACTGGGCTGTCCACTCCTTCAGAATCACCAATGTCGGTGTTCAGGACTCCACCCAGATCCACACTCACATGTGCTACTCCAACTTCAACGACATCATTCATTCCATCATTGATATGGATGCTGATGTTATCACAATTGAGAACTCCCGTTCCGACGAAAAGCTTCTATCAGTCTTCCGTGAAGGAGTTGTTTATGGTGCTGGAATTGGCCCTGGTGTGTATGACATCCACTCCCCAAGAATCCCACCAACTGACGAGATCGCCGACAGGATCAACAAGATGCTTGCTGTCCTTGAGAAGAACGTTTTGTGGGTCAACCCTGACTGTGGGCTAAAAACCCGTAAGTACACAGAGGTTAAGCCTGCCCTCCTCAACATGGTTGCTGCAGCCAAACAAATCCGTAACGAGCTTGCCAAGTGA
Protein sequence

>Msa1031990

MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLKKVSADLRASIWKQMSDVGIKYIPSNTFTYYDHVLDTTATLGAVPPRYGWTGGEIGFDTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPEVNFVYSSHKAVEEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFDLLSLLPKVLAVYKEVIADLKAAGAQFIQFDEPTLVLDLEAHKLQAFTDAYAALTPSFEGLHVLVETYFADIPAEAYKTLTSLSGVAAYGFDLVRGTKTLDLIKAGFPSGKWIFAGVVDGRNIWANDLEASLSTLEALAGIVGKERIVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQKVVEVNALANALAGNKDEAIFSASSAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKAKKISEEEYIKAIKEEIRSVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSALAQSFTKRPMKGMLTGPVTILNWSFVRVDQPRSETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAHYLDWAVHSFRITNVGVQDSTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVVYGAGIGPGVYDIHSPRIPPTDEIADRINKMLAVLEKNVLWVNPDCGLKTRKYTEVKPALLNMVAAAKQIRNELAK*