AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1118520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1118520 MtrunA17_Chr7g0253781 99.738 763 2 0 1 763 1 763 0.0 1570
Msa1118520 MtrunA17_Chr6g0461111 86.614 762 102 0 1 762 1 762 0.0 1382
Msa1118520 MtrunA17_Chr3g0118901 84.190 759 120 0 4 762 52 810 0.0 1340
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1118520 AT5G17920.2 87.795 762 93 0 1 762 1 762 0.0 1406
Msa1118520 AT5G17920.1 87.795 762 93 0 1 762 1 762 0.0 1406
Msa1118520 AT3G03780.1 85.564 762 110 0 1 762 1 762 0.0 1370
Msa1118520 AT3G03780.3 85.564 762 110 0 1 762 1 762 0.0 1370
Msa1118520 AT3G03780.2 85.564 762 110 0 1 762 1 762 0.0 1370
Msa1118520 AT5G20980.2 78.244 763 166 0 1 763 49 811 0.0 1270
Msa1118520 AT5G20980.1 78.244 763 166 0 1 763 49 811 0.0 1270

Find 254 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGGGGTAAAATGAAATTT+TGG 0.152282 7_3:-67279441 None:intergenic
CCAGATTGCTTTGGCTATTA+AGG 0.168335 7_3:+67278664 Msa1118520:CDS
AATAACTGTGTGCAATATTT+AGG 0.188710 7_3:+67279381 Msa1118520:three_prime_UTR
TTGAGTGGTGTCGCCGCTTA+TGG 0.211110 7_3:+67276717 Msa1118520:CDS
TTCACCTCGGGACCCAATTC+TGG 0.220600 7_3:-67275718 None:intergenic
AATTTGCTTTGGAATCATTC+TGG 0.250181 7_3:+67275301 Msa1118520:CDS
TCAAAGCAGCCTCATCAATT+TGG 0.261068 7_3:-67278727 None:intergenic
CATTCATTCCATCATTGATA+TGG 0.263056 7_3:+67278973 Msa1118520:CDS
CGTCAGTTGGTGGGATTCTT+GGG 0.264034 7_3:-67279111 None:intergenic
TTCCGTGAAGGAGTTGTTTA+TGG 0.264508 7_3:+67279052 Msa1118520:CDS
GTCAACTCCCTTGGCGGCTT+TGG 0.265173 7_3:-67276345 None:intergenic
CCCTCCTTAGTTCCACGGTC+TGG 0.268662 7_3:-67277826 None:intergenic
CATGATTATTTGCACAAAAC+TGG 0.282796 7_3:-67279530 None:intergenic
CCACTTTATTGTCCCAGAAT+TGG 0.283271 7_3:+67275705 Msa1118520:CDS
CCAATGAAGGGAATGCTTAC+TGG 0.290945 7_3:+67278452 Msa1118520:CDS
CTGGATTTCCCAGTGGAAAA+TGG 0.292476 7_3:+67276784 Msa1118520:CDS
TCGTCAGTTGGTGGGATTCT+TGG 0.294764 7_3:-67279112 None:intergenic
GGCTTCGCCTTTACTGCTAA+TGG 0.313375 7_3:+67278311 Msa1118520:CDS
CTCTGCAAGTTCTGCAGCTC+AGG 0.318713 7_3:+67277538 Msa1118520:CDS
AGCAAATTTCAACTCTCTCT+TGG 0.323635 7_3:-67275286 None:intergenic
GCTTTATACCTTAAAATACT+AGG 0.326032 7_3:+67279582 Msa1118520:three_prime_UTR
CTTTCAGGCTGCTGCATTGA+AGG 0.334340 7_3:+67277700 Msa1118520:intron
CACTTTATTGTCCCAGAATT+GGG 0.341529 7_3:+67275706 Msa1118520:CDS
GGCTTCTCTCAGTACATTAG+AGG 0.347630 7_3:+67276857 Msa1118520:CDS
GCATTGGCTAATGCACTTGC+AGG 0.348832 7_3:+67277124 Msa1118520:CDS
GAGAGAGTTGAAATTTGCTT+TGG 0.348888 7_3:+67275290 Msa1118520:CDS
CAGAAGACAGTCATTGCCTT+TGG 0.350697 7_3:-67278398 None:intergenic
AGAGTACATTAAGGCAATTA+AGG 0.356445 7_3:+67277967 Msa1118520:CDS
CAAAGGCAATGACTGTCTTC+TGG 0.357313 7_3:+67278399 Msa1118520:CDS
CCAGTAAGCATTCCCTTCAT+TGG 0.357787 7_3:-67278452 None:intergenic
AATCACCAATGTCGGTGTTC+AGG 0.357796 7_3:+67278817 Msa1118520:CDS
GAGAGCAACAAGTATGAAAC+AGG 0.367592 7_3:-67276323 None:intergenic
ATCTTCTTCGCTTCTTGTTA+AGG 0.369718 7_3:-67274462 None:intergenic
CTTAACCTCTGTGTACTTAC+GGG 0.374221 7_3:-67279215 None:intergenic
GCTTAACCTCTGTGTACTTA+CGG 0.383228 7_3:-67279216 None:intergenic
CAGTAAGCATTCCCTTCATT+GGG 0.383689 7_3:-67278451 None:intergenic
CCTCCTTAGTTCCACGGTCT+GGG 0.391526 7_3:-67277825 None:intergenic
AAGCTCGTTACGGATTTGTT+TGG 0.391968 7_3:-67279266 None:intergenic
ATGATCCAATGGTGGTGGTT+GGG 0.395881 7_3:-67277799 None:intergenic
TCGTTGATGGAAGGAACATC+TGG 0.398500 7_3:+67276820 Msa1118520:CDS
ACTTCTTAGCCTTGAATTCA+CGG 0.402531 7_3:-67277853 None:intergenic
GGATGGACTGGTGGTGAGAT+TGG 0.403071 7_3:+67275495 Msa1118520:CDS
GTTGTTTATGGTGCTGGAAT+TGG 0.403152 7_3:+67279064 Msa1118520:CDS
AGTGGAAAATGGATCTTTGC+TGG 0.403330 7_3:+67276795 Msa1118520:CDS
CCTCGGGCTCTCCGTGTACT+AGG 0.405131 7_3:-67278039 None:intergenic
GACACTGTTCCCGTTCTTGT+TGG 0.406603 7_3:+67276299 Msa1118520:CDS
ATCTTTGCTGGAGTCGTTGA+TGG 0.408358 7_3:+67276807 Msa1118520:CDS
AGCACGCTCACTACTTGGAC+TGG 0.412551 7_3:+67278777 Msa1118520:CDS
GGAGGTTATTGCTGATCTTA+AGG 0.413201 7_3:+67276512 Msa1118520:CDS
GTCAAGCCACCAATCATCTA+TGG 0.414314 7_3:+67278362 Msa1118520:CDS
GTCCGAGCACGCTCACTACT+TGG 0.414790 7_3:+67278772 Msa1118520:CDS
ATGGTGGTGGTTGGGAGGAT+TGG 0.414964 7_3:-67277791 None:intergenic
AAAATGGCTTCTCACATTGT+TGG 0.417361 7_3:+67275246 Msa1118520:exon
AGAAGACAGTCATTGCCTTT+GGG 0.421292 7_3:-67278397 None:intergenic
CTTAATTTCATCATCCAACT+TGG 0.422844 7_3:-67277059 None:intergenic
GTTCTGCAGCTCAGGCTTCA+AGG 0.423524 7_3:+67277546 Msa1118520:CDS
TACTTTGGCGAGCAGTTGTC+GGG 0.423587 7_3:+67278290 Msa1118520:CDS
CTGATCTAAGAGCATCAATC+TGG 0.424387 7_3:+67275364 Msa1118520:CDS
ATTTGCTTTGGAATCATTCT+GGG 0.424933 7_3:+67275302 Msa1118520:CDS
TTCACTTGGCAAGCTCGTTA+CGG 0.424936 7_3:-67279276 None:intergenic
CAGTGCCGAGGATTTGAAGA+AGG 0.427889 7_3:+67275335 Msa1118520:CDS
GCAAATTTCAACTCTCTCTT+GGG 0.427892 7_3:-67275285 None:intergenic
TGATGAACCCACACTTGTCC+TGG 0.428099 7_3:+67276560 Msa1118520:CDS
ACTCTTGATTTGATCAAGGC+TGG 0.428427 7_3:+67276765 Msa1118520:CDS
GTACTTTGGCGAGCAGTTGT+CGG 0.430737 7_3:+67278289 Msa1118520:CDS
GCCCTGTCACCATTCTCAAC+TGG 0.432386 7_3:+67278474 Msa1118520:CDS
CATTCCCTTCATTGGGCGCT+TGG 0.433045 7_3:-67278444 None:intergenic
CTCCGAGGAAGAGTACATTA+AGG 0.440393 7_3:+67277958 Msa1118520:CDS
GAGGCTCTTGCCGGCATTGT+GGG 0.441484 7_3:+67276876 Msa1118520:CDS
TCGCCTTTACTGCTAATGGA+TGG 0.442946 7_3:+67278315 Msa1118520:CDS
AGAGGCTCTTGCCGGCATTG+TGG 0.443385 7_3:+67276875 Msa1118520:CDS
CGCCTTTACTGCTAATGGAT+GGG 0.444739 7_3:+67278316 Msa1118520:CDS
AATGATATGGTTGAGTACTT+TGG 0.446026 7_3:+67278275 Msa1118520:CDS
CCTTAATAGCCAAAGCAATC+TGG 0.448275 7_3:-67278664 None:intergenic
GAAACAGGGCCAACAAGAAC+GGG 0.453352 7_3:-67276308 None:intergenic
CTTGTAGACGGCAAGGACCT+TGG 0.453971 7_3:-67276396 None:intergenic
GAGGGTTCGCCGTGAATTCA+AGG 0.455640 7_3:+67277844 Msa1118520:CDS
TTGTAGACGGCAAGGACCTT+GGG 0.455997 7_3:-67276395 None:intergenic
CCACGATGTGACAATATCCT+TGG 0.456510 7_3:-67279627 None:intergenic
CACCCATCCATTAGCAGTAA+AGG 0.457339 7_3:-67278318 None:intergenic
CACCATAAACAACTCCTTCA+CGG 0.461766 7_3:-67279054 None:intergenic
GGACCTTGGGAAGCAAAGAT+AGG 0.467226 7_3:-67276382 None:intergenic
AGTAAGTAAAAGTGTTGCTT+GGG 0.467361 7_3:-67275419 None:intergenic
GCCACGGATACAGAGACATT+TGG 0.467926 7_3:-67279475 None:intergenic
TAAGACTCTTGATTTGATCA+AGG 0.473829 7_3:+67276761 Msa1118520:CDS
CTTTACCAAGCGCCCAATGA+AGG 0.474796 7_3:+67278439 Msa1118520:CDS
ATTGCTGATCTTAAGGCAGC+TGG 0.475107 7_3:+67276519 Msa1118520:CDS
ACCACCAGTCCATCCATACC+TGG 0.475259 7_3:-67275487 None:intergenic
ATCCTCCCAACCACCACCAT+TGG 0.476001 7_3:+67277794 Msa1118520:CDS
TAATGCCACCGTCCCTGCTA+TGG 0.476367 7_3:+67275548 Msa1118520:CDS
ATGAATGATGTCGTTGAAGT+TGG 0.478731 7_3:-67278957 None:intergenic
AAAGGATTTGTCAACTCCCT+TGG 0.479781 7_3:-67276354 None:intergenic
TGTAGAAATAAACTTATAAG+AGG 0.480421 7_3:+67279706 Msa1118520:intron
TGCAGAACTTGCAGAGAAGA+TGG 0.480429 7_3:-67277531 None:intergenic
TATGGTGCTGGAATTGGCCC+TGG 0.480835 7_3:+67279070 Msa1118520:CDS
TCACCTCGGGACCCAATTCT+GGG 0.481128 7_3:-67275717 None:intergenic
ATCAGCATCCATATCAATGA+TGG 0.484383 7_3:-67278981 None:intergenic
AACGAGCTTGCCAAGTGAAA+AGG 0.486521 7_3:+67279280 Msa1118520:exon
TCTCCTATCTTTGCTTCCCA+AGG 0.486549 7_3:+67276379 Msa1118520:CDS
GCAACCATGTTGAGGAGGGC+AGG 0.486565 7_3:-67279238 None:intergenic
ACAGCCTCGTTAGTCACTCT+TGG 0.488254 7_3:-67277578 None:intergenic
ACTTGTGAGCTTCAAGATCC+AGG 0.488502 7_3:-67276578 None:intergenic
CAAGGCTGTTGAAGAATACA+AGG 0.493097 7_3:+67275759 Msa1118520:CDS
GAAGGAGTTGTTTATGGTGC+TGG 0.493441 7_3:+67279058 Msa1118520:CDS
TGCCTTAATGTACTCTTCCT+CGG 0.493586 7_3:-67277960 None:intergenic
TTGGTGGGATTCTTGGGGAG+TGG 0.493782 7_3:-67279105 None:intergenic
GTCCAAGTAGTGAGCGTGCT+CGG 0.494016 7_3:-67278774 None:intergenic
AATGATCCAATGGTGGTGGT+TGG 0.497627 7_3:-67277800 None:intergenic
CTCACATCACCATAGATGAT+TGG 0.497831 7_3:-67278371 None:intergenic
CTTTATACCTTAAAATACTA+GGG 0.498163 7_3:+67279583 Msa1118520:three_prime_UTR
AATACCTTTGCCCACAATGC+CGG 0.498196 7_3:-67276886 None:intergenic
GTGAAGAAGTGAGCAGGAAG+TGG 0.504910 7_3:-67277011 None:intergenic
TTAAACTTCTTACTTGTAGA+CGG 0.506307 7_3:-67276408 None:intergenic
AATGGATGGGTGCAATCCTA+TGG 0.506434 7_3:+67278329 Msa1118520:CDS
TAGTAAGTAAAAGTGTTGCT+TGG 0.508330 7_3:-67275420 None:intergenic
AGTACATTAGAGGCTCTTGC+CGG 0.509775 7_3:+67276867 Msa1118520:CDS
CACTTGGTCATCTCCATAGC+AGG 0.511355 7_3:-67275561 None:intergenic
GGATTTGTCAACTCCCTTGG+CGG 0.513440 7_3:-67276351 None:intergenic
TGCAATATCAATAAAGATTG+TGG 0.516704 7_3:-67279502 None:intergenic
CTAGTTGGTGTCGAACCACT+TGG 0.518118 7_3:-67275577 None:intergenic
AGCCAAAGCAATCTGGTAGC+AGG 0.519856 7_3:-67278657 None:intergenic
TTGCCAAGTGAAAAGGTTGA+AGG 0.520263 7_3:+67279287 Msa1118520:exon
GACCTTGAGAAAGGTGGTAT+TGG 0.521585 7_3:+67278698 Msa1118520:CDS
AGCAGTGTGAAGAAGTGAGC+AGG 0.525551 7_3:-67277017 None:intergenic
TCGGCGATCTCGTCAGTTGG+TGG 0.525621 7_3:-67279121 None:intergenic
CCGTTCCACCCAGGTATGGA+TGG 0.526113 7_3:+67275478 Msa1118520:CDS
GGGTGGAACGGCGCCGAGAG+TGG 0.527072 7_3:-67275466 None:intergenic
GACCAGTTGAGAATGGTGAC+AGG 0.532128 7_3:-67278476 None:intergenic
AGTTGTTGAAGTAAATGCAT+TGG 0.532315 7_3:+67277108 Msa1118520:CDS
GACCTGCTACCAGATTGCTT+TGG 0.533114 7_3:+67278655 Msa1118520:CDS
CTCCTTAGTTCCACGGTCTG+GGG 0.533778 7_3:-67277824 None:intergenic
GATGAGGCTGCTTTGAGAGA+GGG 0.534990 7_3:+67278734 Msa1118520:CDS
GTTTCACGCCATGGTTTCCA+AGG 0.535227 7_3:+67279610 Msa1118520:three_prime_UTR
TTTCAGGCTGCTGCATTGAA+GGG 0.536663 7_3:+67277701 Msa1118520:intron
GGAAACAGATGTCTGATGTT+GGG 0.538478 7_3:+67275385 Msa1118520:CDS
TCCAAATGTCTCTGTATCCG+TGG 0.540894 7_3:+67279474 Msa1118520:three_prime_UTR
GTTGCTCTCCAAAGCCGCCA+AGG 0.542973 7_3:+67276337 Msa1118520:CDS
AGGGTCTTGTATGCCTCAGC+GGG 0.543065 7_3:-67276687 None:intergenic
TGAAACAGGGCCAACAAGAA+CGG 0.543972 7_3:-67276309 None:intergenic
ACATGGAGACCTTCAAAAGA+AGG 0.544230 7_3:-67276636 None:intergenic
TGGAAACAGATGTCTGATGT+TGG 0.545584 7_3:+67275384 Msa1118520:CDS
AACGAAGGACCAGTTGAGAA+TGG 0.550417 7_3:-67278483 None:intergenic
CGGCGATCTCGTCAGTTGGT+GGG 0.551989 7_3:-67279120 None:intergenic
GGGGAATGATCCAATGGTGG+TGG 0.552050 7_3:-67277804 None:intergenic
CTCACTTCTTCACACTGCTG+TGG 0.553458 7_3:+67277021 Msa1118520:CDS
TTGTCACATCGTGGTTTGCA+AGG 0.553611 7_3:+67279636 Msa1118520:three_prime_UTR
CCCACAAAACGTTCTTCTCA+AGG 0.553901 7_3:-67279168 None:intergenic
TCGTTAGAGTTGACCAGCCT+AGG 0.554706 7_3:+67278501 Msa1118520:CDS
TGTGGGTCAACCCTGACTGT+GGG 0.554903 7_3:+67279185 Msa1118520:CDS
TTGTGGGTCAACCCTGACTG+TGG 0.555145 7_3:+67279184 Msa1118520:CDS
CATTGTTGGATACCCTCGTA+TGG 0.555284 7_3:+67275260 Msa1118520:CDS
GACTAACGAGGCTGTTCAGA+AGG 0.555699 7_3:+67277586 Msa1118520:CDS
CCACCCAGGTATGGATGGAC+TGG 0.557087 7_3:+67275483 Msa1118520:CDS
TTGCTGGAGTCGTTGATGGA+AGG 0.557997 7_3:+67276811 Msa1118520:CDS
CTTGCCGGCATTGTGGGCAA+AGG 0.558431 7_3:+67276882 Msa1118520:CDS
TTGCTCTCCAAAGCCGCCAA+GGG 0.567535 7_3:+67276338 Msa1118520:CDS
TGCAGCAACCATGTTGAGGA+GGG 0.567910 7_3:-67279242 None:intergenic
GTGCTACTAATGTCAGTGCC+AGG 0.568192 7_3:+67277738 Msa1118520:CDS
GAAGTTGAAGACCTTGAGAA+AGG 0.568559 7_3:+67278689 Msa1118520:CDS
ACCTTTCGGTGTTAGTGTAG+AGG 0.570135 7_3:-67274504 None:intergenic
AGGCTGGTCAACTCTAACGA+AGG 0.572648 7_3:-67278498 None:intergenic
CTGTCGGCGATCTCGTCAGT+TGG 0.575748 7_3:-67279124 None:intergenic
GAGTACACAAAGTTCACCTC+GGG 0.576283 7_3:-67275730 None:intergenic
TAGGGCATAGTTTCACGCCA+TGG 0.577684 7_3:+67279601 Msa1118520:three_prime_UTR
ACATCACCATAGATGATTGG+TGG 0.578253 7_3:-67278368 None:intergenic
AGAAACCTTCTTCAAATCCT+CGG 0.579553 7_3:-67275340 None:intergenic
TCTTGTTAACGAGACCAAGT+TGG 0.581310 7_3:+67277045 Msa1118520:CDS
CTCTCGGCGCCGTTCCACCC+AGG 0.582006 7_3:+67275469 Msa1118520:CDS
TCTCTCTTGGGTCCCATACG+AGG 0.582372 7_3:-67275273 None:intergenic
CATCTGGGCAAATGATCTTG+AGG 0.583442 7_3:+67276836 Msa1118520:CDS
TCCTTAGTTCCACGGTCTGG+GGG 0.584719 7_3:-67277823 None:intergenic
TTTGCAAGGATATTGTTGAA+AGG 0.585081 7_3:+67279650 Msa1118520:three_prime_UTR
GTCAGTTGGTGGGATTCTTG+GGG 0.585834 7_3:-67279110 None:intergenic
CTGCAGCAACCATGTTGAGG+AGG 0.586019 7_3:-67279243 None:intergenic
GCACGCTCACTACTTGGACT+GGG 0.587006 7_3:+67278778 Msa1118520:CDS
TGATGAGGCTGCTTTGAGAG+AGG 0.587396 7_3:+67278733 Msa1118520:CDS
CCATCCATACCTGGGTGGAA+CGG 0.587440 7_3:-67275478 None:intergenic
AGCGGGAATATCAGCGAAGT+AGG 0.587569 7_3:-67276670 None:intergenic
CCAATTCTGGGACAATAAAG+TGG 0.587631 7_3:-67275705 None:intergenic
TTCAAGATCCAGGACAAGTG+TGG 0.587633 7_3:-67276568 None:intergenic
CTTTGTGTACTCTTCTCACA+AGG 0.588250 7_3:+67275741 Msa1118520:CDS
TGGAACGGCGCCGAGAGTGG+CGG 0.589325 7_3:-67275463 None:intergenic
AATCAAGAGTCTTAGTTCCA+CGG 0.589789 7_3:-67276752 None:intergenic
CATTGGTGATTCTGAAGGAG+TGG 0.589827 7_3:-67278805 None:intergenic
ACTTGCAGGCAACAAGGATG+AGG 0.590756 7_3:+67277138 Msa1118520:CDS
TTTACCAAGCGCCCAATGAA+GGG 0.590785 7_3:+67278440 Msa1118520:CDS
TCCTTCAGAATCACCAATGT+CGG 0.592425 7_3:+67278809 Msa1118520:CDS
GGTCGAGTTTATACCTAGGC+TGG 0.592475 7_3:-67278514 None:intergenic
CACCAATACCACCTTTCTCA+AGG 0.596575 7_3:-67278700 None:intergenic
TCCTCTACACTAACACCGAA+AGG 0.597221 7_3:+67274503 Msa1118520:five_prime_UTR
AAGCAAAGATAGGAGATCAA+AGG 0.597361 7_3:-67276372 None:intergenic
GGAGTCCTGAACACCGACAT+TGG 0.602532 7_3:-67278822 None:intergenic
CTTGACACAACGAGATCCAT+AGG 0.604689 7_3:-67278345 None:intergenic
ATCCAATGGTGGTGGTTGGG+AGG 0.606015 7_3:-67277796 None:intergenic
TGGATGATGAAATTAAGTCA+TGG 0.607380 7_3:+67277065 Msa1118520:CDS
TGACATTAGTAGCACGGCGA+TGG 0.607809 7_3:-67277730 None:intergenic
GCGAACCCTCCTTAGTTCCA+CGG 0.608505 7_3:-67277831 None:intergenic
TAATGCACTTGCAGGCAACA+AGG 0.608842 7_3:+67277132 Msa1118520:CDS
GAGTGGATGTCATACACACC+AGG 0.609608 7_3:-67279088 None:intergenic
CCAGACCGTGGAACTAAGGA+GGG 0.610455 7_3:+67277826 Msa1118520:CDS
CAACTGACGAGATCGCCGAC+AGG 0.610689 7_3:+67279125 Msa1118520:CDS
CTCGTTAGTCACTCTTGGAG+AGG 0.610883 7_3:-67277573 None:intergenic
TGGCTGCAGCAACCATGTTG+AGG 0.611356 7_3:-67279246 None:intergenic
GACAAAATCAAATCCATAAG+CGG 0.612482 7_3:-67276730 None:intergenic
CTTGATACTACCGCCACTCT+CGG 0.616148 7_3:+67275453 Msa1118520:CDS
TAAAGATTGTGGCAGAGCCA+CGG 0.616622 7_3:-67279491 None:intergenic
AGACAGTCATTGCCTTTGGG+CGG 0.616757 7_3:-67278394 None:intergenic
CGTTGATGGAAGGAACATCT+GGG 0.617267 7_3:+67276821 Msa1118520:CDS
AAGCATCTTGTTGATCCTGT+CGG 0.618740 7_3:-67279140 None:intergenic
GGTCATCTCCATAGCAGGGA+CGG 0.618946 7_3:-67275556 None:intergenic
TCAAGATCCAGGACAAGTGT+GGG 0.621194 7_3:-67276567 None:intergenic
CTCTCTTGGGTCCCATACGA+GGG 0.622388 7_3:-67275272 None:intergenic
ATTGTTGGATACCCTCGTAT+GGG 0.623364 7_3:+67275261 Msa1118520:CDS
GAATCTGTTTGATTTACACA+AGG 0.623628 7_3:+67279334 Msa1118520:three_prime_UTR
CTTCTTACTTGTAGACGGCA+AGG 0.623727 7_3:-67276403 None:intergenic
TGTCCCAGAATTGGGTCCCG+AGG 0.624259 7_3:+67275714 Msa1118520:CDS
ACCGACATTGGTGATTCTGA+AGG 0.624679 7_3:-67278810 None:intergenic
GACAATATCCTTGGAAACCA+TGG 0.626077 7_3:-67279618 None:intergenic
GTACATTAAGGCAATTAAGG+AGG 0.627912 7_3:+67277970 Msa1118520:CDS
CCCAGGTATGGATGGACTGG+TGG 0.629978 7_3:+67275486 Msa1118520:CDS
AGTAGGTCTCAACAAGAACA+TGG 0.630158 7_3:-67276653 None:intergenic
CTTCTATCAGTCTTCCGTGA+AGG 0.630174 7_3:+67279040 Msa1118520:CDS
TAAGCCTGCCCTCCTCAACA+TGG 0.632365 7_3:+67279234 Msa1118520:CDS
GTTGAAGACCTTGAGAAAGG+TGG 0.637199 7_3:+67278692 Msa1118520:CDS
GACACCACTCAAAGATGTGA+GGG 0.637443 7_3:-67276706 None:intergenic
GATATTGATGTCCTAGTACA+CGG 0.639077 7_3:+67278028 Msa1118520:CDS
TGGTGATGTGAGCCGCCCAA+AGG 0.639821 7_3:+67278382 Msa1118520:CDS
CGACACCACTCAAAGATGTG+AGG 0.643850 7_3:-67276707 None:intergenic
CGGTGTTCAGGACTCCACCC+AGG 0.645289 7_3:+67278829 Msa1118520:CDS
ACCAGTTGAGAATGGTGACA+GGG 0.646821 7_3:-67278475 None:intergenic
TGGAGTAGCACATGTGAGTG+TGG 0.647254 7_3:-67278937 None:intergenic
TGAAGAATACAAGGAAGCCA+AGG 0.648603 7_3:+67275768 Msa1118520:CDS
CCAAGGATATTGTCACATCG+TGG 0.649111 7_3:+67279627 Msa1118520:three_prime_UTR
CTTCGCTGATATTCCCGCTG+AGG 0.651444 7_3:+67276674 Msa1118520:CDS
TGGCACTGACATTAGTAGCA+CGG 0.651735 7_3:-67277736 None:intergenic
ATCAAGGCTGGATTTCCCAG+TGG 0.656695 7_3:+67276777 Msa1118520:CDS
GAGGGTCTTGTATGCCTCAG+CGG 0.658058 7_3:-67276688 None:intergenic
CCACCAGTCCATCCATACCT+GGG 0.661096 7_3:-67275486 None:intergenic
ACTTGGTCATCTCCATAGCA+GGG 0.665945 7_3:-67275560 None:intergenic
AGAGTACACAAAGTTCACCT+CGG 0.672545 7_3:-67275731 None:intergenic
CATCTCCATAGCAGGGACGG+TGG 0.675302 7_3:-67275553 None:intergenic
TACTAATGTCAGTGCCAGGT+TGG 0.676683 7_3:+67277742 Msa1118520:CDS
TGGTGTCATCCAAATTGATG+AGG 0.682603 7_3:+67278718 Msa1118520:CDS
GCGTGCTCGGACTTCCTCAG+TGG 0.686114 7_3:-67278761 None:intergenic
AAGACCCTCACATCTTTGAG+TGG 0.695040 7_3:+67276702 Msa1118520:CDS
CTTGAAGCTCAACAACTGAG+CGG 0.697886 7_3:-67277997 None:intergenic
AGAATACAAGGAAGCCAAGG+CGG 0.708610 7_3:+67275771 Msa1118520:CDS
CTGCTATGGAGATGACCAAG+TGG 0.713786 7_3:+67275562 Msa1118520:CDS
CTCTCCAAGAGTGACTAACG+AGG 0.723815 7_3:+67277574 Msa1118520:CDS
CCAGTCCATCCATACCTGGG+TGG 0.730069 7_3:-67275483 None:intergenic
AGAGCAACAAGTATGAAACA+GGG 0.741881 7_3:-67276322 None:intergenic
AGTGGATGTCATACACACCA+GGG 0.742744 7_3:-67279087 None:intergenic
GTGAGCCAAACATACCTGGG+TGG 0.772714 7_3:-67278843 None:intergenic
TGAGAGAGGGACTACCACTG+AGG 0.777373 7_3:+67278747 Msa1118520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATGATTATGATTAA+GGG - chr7_3:67274598-67274617 None:intergenic 10.0%
!!! TCAATAGTTTTTTTTTTTTT+TGG + chr7_3:67277404-67277423 Msa1118520:intron 10.0%
!! TTAACAAAATTAAATAAATC+CGG - chr7_3:67278129-67278148 None:intergenic 10.0%
!! TTATTATGATTATGATTAAG+GGG - chr7_3:67274597-67274616 None:intergenic 15.0%
!! GATTATTATGATTATGATTA+AGG - chr7_3:67274599-67274618 None:intergenic 15.0%
!! TTAATTAAATAGTTAACTAG+AGG - chr7_3:67274990-67275009 None:intergenic 15.0%
!!! AATATTATCAGTTTTATTAG+TGG + chr7_3:67275081-67275100 Msa1118520:intron 15.0%
!!! ATATTATCAGTTTTATTAGT+GGG + chr7_3:67275082-67275101 Msa1118520:intron 15.0%
!!! ATTTGATTTATACAGAAAAA+TGG + chr7_3:67275230-67275249 Msa1118520:intron 15.0%
!!! TGACATTTTTAATTAGATTT+GGG + chr7_3:67275962-67275981 Msa1118520:intron 15.0%
!!! TAAGAAGTTTAAATTGTTTT+GGG + chr7_3:67276419-67276438 Msa1118520:intron 15.0%
!! AATTAAGTAAATTCAAGTAT+TGG + chr7_3:67277304-67277323 Msa1118520:intron 15.0%
!!! TTTTTAACCTTTATGATAAA+AGG + chr7_3:67277431-67277450 Msa1118520:intron 15.0%
!! TAACAAAATTAAATAAATCC+GGG - chr7_3:67278128-67278147 None:intergenic 15.0%
!!! GAAATTTTATTATAACATGT+AGG - chr7_3:67278905-67278924 None:intergenic 15.0%
!! TATTATGATTATGATTAAGG+GGG - chr7_3:67274596-67274615 None:intergenic 20.0%
!!! TTATTTTTTTGTTGAAAGCT+CGG - chr7_3:67275152-67275171 None:intergenic 20.0%
!!! GTGACATTTTTAATTAGATT+TGG + chr7_3:67275961-67275980 Msa1118520:intron 20.0%
!!! GTAAGAAGTTTAAATTGTTT+TGG + chr7_3:67276418-67276437 Msa1118520:intron 20.0%
!!! AAGAAGTTTAAATTGTTTTG+GGG + chr7_3:67276420-67276439 Msa1118520:intron 20.0%
!! TTATTGAACATTCATTACAT+TGG + chr7_3:67276908-67276927 Msa1118520:intron 20.0%
!!! ATTTACTTCAACAACTTTTT+GGG - chr7_3:67277104-67277123 None:intergenic 20.0%
!!! ACACTTGTTAATACTATTAT+AGG - chr7_3:67277333-67277352 None:intergenic 20.0%
!!! TATAGAACCTTTTATCATAA+AGG - chr7_3:67277441-67277460 None:intergenic 20.0%
!!! TCACTTAGTTAATGTTTTTA+CGG + chr7_3:67277495-67277514 Msa1118520:intron 20.0%
!!! TAATACTCGTTTTGTTTATT+TGG + chr7_3:67277641-67277660 Msa1118520:intron 20.0%
!!! ACAAGGATAATTTTCTATTT+TGG + chr7_3:67279351-67279370 Msa1118520:three_prime_UTR 20.0%
!! CTTTATACCTTAAAATACTA+GGG + chr7_3:67279583-67279602 Msa1118520:three_prime_UTR 20.0%
!! TGTAGAAATAAACTTATAAG+AGG + chr7_3:67279706-67279725 Msa1118520:intron 20.0%
!! ATTTTCAGATTCAGATCTAA+TGG - chr7_3:67274743-67274762 None:intergenic 25.0%
! GTGTGAATTAACGAAAATTA+TGG - chr7_3:67274796-67274815 None:intergenic 25.0%
! ACGAGTAAAACTAATTGAAT+TGG - chr7_3:67274856-67274875 None:intergenic 25.0%
! AATAGTTAACTAGAGGATTA+AGG - chr7_3:67274983-67275002 None:intergenic 25.0%
!!! GATTTTGTTGTTATTGTTGT+TGG + chr7_3:67275190-67275209 Msa1118520:intron 25.0%
!!! ATTCGATACTTACTTTTCAA+TGG + chr7_3:67275518-67275537 Msa1118520:CDS 25.0%
! GCTTAATGTTTAATGTCATT+GGG + chr7_3:67275855-67275874 Msa1118520:intron 25.0%
!!! TGACATTTTTAACTAGATCT+AGG + chr7_3:67275915-67275934 Msa1118520:intron 25.0%
!!! ATTTTTAACTAGATCTAGGT+TGG + chr7_3:67275919-67275938 Msa1118520:intron 25.0%
!!! TTGGTTTTTGTTGTTGTTTT+TGG + chr7_3:67276049-67276068 Msa1118520:intron 25.0%
!!! TGGTTTTTGTTGTTGTTTTT+GGG + chr7_3:67276050-67276069 Msa1118520:intron 25.0%
!!! TTAGTTTGTCCTTTTTTGTA+TGG + chr7_3:67276122-67276141 Msa1118520:intron 25.0%
! TAACAAGAACCATACAAAAA+AGG - chr7_3:67276134-67276153 None:intergenic 25.0%
! TTAAACTTCTTACTTGTAGA+CGG - chr7_3:67276411-67276430 None:intergenic 25.0%
!!! AGAAGTTTAAATTGTTTTGG+GGG + chr7_3:67276421-67276440 Msa1118520:intron 25.0%
!! CATTTACTTCAACAACTTTT+TGG - chr7_3:67277105-67277124 None:intergenic 25.0%
! AATTATGTGGTGAAATAAAC+AGG - chr7_3:67277476-67277495 None:intergenic 25.0%
! CATTAACTAAGTGAATTATG+TGG - chr7_3:67277489-67277508 None:intergenic 25.0%
! AAAGATATCTTTATTACACC+CGG + chr7_3:67278107-67278126 Msa1118520:intron 25.0%
!! AATTAGTTGGAAGTACAATT+GGG - chr7_3:67278229-67278248 None:intergenic 25.0%
! CAGCATTCATATCATATATT+TGG + chr7_3:67278593-67278612 Msa1118520:intron 25.0%
! AATAACTGTGTGCAATATTT+AGG + chr7_3:67279381-67279400 Msa1118520:three_prime_UTR 25.0%
! ATTTGGAAAAACAGAAAAGT+GGG - chr7_3:67279461-67279480 None:intergenic 25.0%
! TGCAATATCAATAAAGATTG+TGG - chr7_3:67279505-67279524 None:intergenic 25.0%
!! CAATTCACTATTTTCAAATG+CGG + chr7_3:67279560-67279579 Msa1118520:three_prime_UTR 25.0%
! GCTTTATACCTTAAAATACT+AGG + chr7_3:67279582-67279601 Msa1118520:three_prime_UTR 25.0%
! CTAATTGAATTGGAGTTGAT+TGG - chr7_3:67274846-67274865 None:intergenic 30.0%
TGTGAATTTAACGAACATGA+AGG - chr7_3:67274914-67274933 None:intergenic 30.0%
! TTCAAGATCGAGTACATTTT+AGG + chr7_3:67274941-67274960 Msa1118520:intron 30.0%
!! AATTTGCTTTGGAATCATTC+TGG + chr7_3:67275301-67275320 Msa1118520:CDS 30.0%
!! ATTTGCTTTGGAATCATTCT+GGG + chr7_3:67275302-67275321 Msa1118520:CDS 30.0%
!! AGTAAGTAAAAGTGTTGCTT+GGG - chr7_3:67275422-67275441 None:intergenic 30.0%
!! TAGTAAGTAAAAGTGTTGCT+TGG - chr7_3:67275423-67275442 None:intergenic 30.0%
ATGACATTAAACATTAAGCC+AGG - chr7_3:67275854-67275873 None:intergenic 30.0%
GGCTTAATGTTTAATGTCAT+TGG + chr7_3:67275854-67275873 Msa1118520:intron 30.0%
!! CTAGGTTGGAGTTTTTAATT+AGG + chr7_3:67275933-67275952 Msa1118520:intron 30.0%
!! GTTGGAGTTTTTAATTAGGA+GGG + chr7_3:67275937-67275956 Msa1118520:intron 30.0%
!!! TTTTGATTTGTCTTACAGCT+TGG + chr7_3:67276272-67276291 Msa1118520:intron 30.0%
!! TTGCTTTTAACTACTAATGC+AGG + chr7_3:67276490-67276509 Msa1118520:intron 30.0%
!! TGCTTTTAACTACTAATGCA+GGG + chr7_3:67276491-67276510 Msa1118520:intron 30.0%
GACAAAATCAAATCCATAAG+CGG - chr7_3:67276733-67276752 None:intergenic 30.0%
! TAAGACTCTTGATTTGATCA+AGG + chr7_3:67276761-67276780 Msa1118520:CDS 30.0%
CTTAATTTCATCATCCAACT+TGG - chr7_3:67277062-67277081 None:intergenic 30.0%
TGGATGATGAAATTAAGTCA+TGG + chr7_3:67277065-67277084 Msa1118520:CDS 30.0%
AGTTGTTGAAGTAAATGCAT+TGG + chr7_3:67277108-67277127 Msa1118520:CDS 30.0%
GTGAGATGAAATGAAAGAAA+TGG - chr7_3:67277170-67277189 None:intergenic 30.0%
! GTTTTTACGGTTTCATTTTC+AGG + chr7_3:67277508-67277527 Msa1118520:intron 30.0%
AAAACGAGTATTAGAACAGA+GGG - chr7_3:67277634-67277653 None:intergenic 30.0%
!!! GTTTTGTTTATTTGGATCTG+TGG + chr7_3:67277649-67277668 Msa1118520:intron 30.0%
GACACAATGTCAAATAAACA+AGG - chr7_3:67277907-67277926 None:intergenic 30.0%
AGAGTACATTAAGGCAATTA+AGG + chr7_3:67277967-67277986 Msa1118520:CDS 30.0%
TGCTTCAATTGACTAAAAGA+AGG - chr7_3:67278088-67278107 None:intergenic 30.0%
! AACATCAAGGGCATAAAATA+TGG - chr7_3:67278194-67278213 None:intergenic 30.0%
! CAATTAGTTGGAAGTACAAT+TGG - chr7_3:67278230-67278249 None:intergenic 30.0%
ATTGTACTTCCAACTAATTG+TGG + chr7_3:67278230-67278249 Msa1118520:intron 30.0%
ATTCCTCTGCATAAAAAAAG+AGG - chr7_3:67278258-67278277 None:intergenic 30.0%
! TTTTATGCAGAGGAATGATA+TGG + chr7_3:67278262-67278281 Msa1118520:intron 30.0%
AATGATATGGTTGAGTACTT+TGG + chr7_3:67278275-67278294 Msa1118520:CDS 30.0%
CATTCATTCCATCATTGATA+TGG + chr7_3:67278973-67278992 Msa1118520:CDS 30.0%
! GAATCTGTTTGATTTACACA+AGG + chr7_3:67279334-67279353 Msa1118520:three_prime_UTR 30.0%
!! TAAAATGAAATTTTGGGAGG+GGG - chr7_3:67279437-67279456 None:intergenic 30.0%
!! GTAAAATGAAATTTTGGGAG+GGG - chr7_3:67279438-67279457 None:intergenic 30.0%
!! GGTAAAATGAAATTTTGGGA+GGG - chr7_3:67279439-67279458 None:intergenic 30.0%
! GTGGGGTAAAATGAAATTTT+GGG - chr7_3:67279443-67279462 None:intergenic 30.0%
! AGTGGGGTAAAATGAAATTT+TGG - chr7_3:67279444-67279463 None:intergenic 30.0%
TTTGGAAAAACAGAAAAGTG+GGG - chr7_3:67279460-67279479 None:intergenic 30.0%
CATTTGGAAAAACAGAAAAG+TGG - chr7_3:67279462-67279481 None:intergenic 30.0%
CATGATTATTTGCACAAAAC+TGG - chr7_3:67279533-67279552 None:intergenic 30.0%
! AACTATGCCCTAGTATTTTA+AGG - chr7_3:67279593-67279612 None:intergenic 30.0%
TTTGCAAGGATATTGTTGAA+AGG + chr7_3:67279650-67279669 Msa1118520:three_prime_UTR 30.0%
ATCTTCTTCGCTTCTTGTTA+AGG - chr7_3:67274465-67274484 None:intergenic 35.0%
ATGATTATGATTAAGGGGGA+AGG - chr7_3:67274592-67274611 None:intergenic 35.0%
AGTGTTCTTGTTAGGTTTAG+CGG - chr7_3:67274687-67274706 None:intergenic 35.0%
!! GAACTAAGAGTGTTCTTGTT+AGG - chr7_3:67274695-67274714 None:intergenic 35.0%
!! GGAGTATGGATTAGTGATTA+AGG - chr7_3:67274825-67274844 None:intergenic 35.0%
! AATTGGAGTTGATTGGAGTA+TGG - chr7_3:67274839-67274858 None:intergenic 35.0%
GGATTAAGGAATAAGCAACT+AGG - chr7_3:67274969-67274988 None:intergenic 35.0%
AAAATGGCTTCTCACATTGT+TGG + chr7_3:67275246-67275265 Msa1118520:exon 35.0%
GCAAATTTCAACTCTCTCTT+GGG - chr7_3:67275288-67275307 None:intergenic 35.0%
AGCAAATTTCAACTCTCTCT+TGG - chr7_3:67275289-67275308 None:intergenic 35.0%
! GAGAGAGTTGAAATTTGCTT+TGG + chr7_3:67275290-67275309 Msa1118520:CDS 35.0%
AGAAACCTTCTTCAAATCCT+CGG - chr7_3:67275343-67275362 None:intergenic 35.0%
!! ACTTACTTTTCAATGGCTAG+AGG + chr7_3:67275525-67275544 Msa1118520:CDS 35.0%
TTTGATGAGTTAGTGACTCT+GGG + chr7_3:67275633-67275652 Msa1118520:intron 35.0%
CACTTTATTGTCCCAGAATT+GGG + chr7_3:67275706-67275725 Msa1118520:CDS 35.0%
!!! CGTTTTGTTTTTGCTTATGC+AGG + chr7_3:67275807-67275826 Msa1118520:intron 35.0%
!! AAATGTTAGCTTTGTTAGCC+TGG + chr7_3:67275833-67275852 Msa1118520:intron 35.0%
!! ATGTCATTGGGAAGTATTGT+TGG + chr7_3:67275867-67275886 Msa1118520:intron 35.0%
!! TGTCATTGGGAAGTATTGTT+GGG + chr7_3:67275868-67275887 Msa1118520:intron 35.0%
!! GGTTGGAGTTTTTAATTAGG+AGG + chr7_3:67275936-67275955 Msa1118520:intron 35.0%
TAGCTTCACTTAGTGGAATA+AGG + chr7_3:67276025-67276044 Msa1118520:intron 35.0%
GAGTTTGAAAGATCTTTGGT+TGG + chr7_3:67276074-67276093 Msa1118520:intron 35.0%
TTTGAAAGATCTTTGGTTGG+TGG + chr7_3:67276077-67276096 Msa1118520:intron 35.0%
TTGAAAGATCTTTGGTTGGT+GGG + chr7_3:67276078-67276097 Msa1118520:intron 35.0%
TCTACTATAATAGACCACAC+AGG - chr7_3:67276204-67276223 None:intergenic 35.0%
AGAGCAACAAGTATGAAACA+GGG - chr7_3:67276325-67276344 None:intergenic 35.0%
AAGCAAAGATAGGAGATCAA+AGG - chr7_3:67276375-67276394 None:intergenic 35.0%
!! TTTTAACTACTAATGCAGGG+AGG + chr7_3:67276494-67276513 Msa1118520:intron 35.0%
!! TATGGATTTGATTTTGTCCG+TGG + chr7_3:67276735-67276754 Msa1118520:CDS 35.0%
AATCAAGAGTCTTAGTTCCA+CGG - chr7_3:67276755-67276774 None:intergenic 35.0%
CAAAACGAGTATTAGAACAG+AGG - chr7_3:67277635-67277654 None:intergenic 35.0%
ACCCTTTCTATTCAACTTTC+AGG + chr7_3:67277685-67277704 Msa1118520:intron 35.0%
GCCTGAAAGTTGAATAGAAA+GGG - chr7_3:67277689-67277708 None:intergenic 35.0%
AGCCTGAAAGTTGAATAGAA+AGG - chr7_3:67277690-67277709 None:intergenic 35.0%
!! ACTTCTTAGCCTTGAATTCA+CGG - chr7_3:67277856-67277875 None:intergenic 35.0%
GTACATTAAGGCAATTAAGG+AGG + chr7_3:67277970-67277989 Msa1118520:CDS 35.0%
GATATTGATGTCCTAGTACA+CGG + chr7_3:67278028-67278047 Msa1118520:CDS 35.0%
GTTTCTCTTCAAAACAGAAG+AGG - chr7_3:67278163-67278182 None:intergenic 35.0%
AATCGGCAATCTAACATCAA+GGG - chr7_3:67278206-67278225 None:intergenic 35.0%
! TTGGAAGTACAATTGGGAAT+CGG - chr7_3:67278223-67278242 None:intergenic 35.0%
AAAGAGGATCCACAATTAGT+TGG - chr7_3:67278242-67278261 None:intergenic 35.0%
!!! GATCCTCTTTTTTTATGCAG+AGG + chr7_3:67278252-67278271 Msa1118520:intron 35.0%
! TTTTCCTGTGATGTTACAAG+GGG - chr7_3:67278541-67278560 None:intergenic 35.0%
! CTTTTCCTGTGATGTTACAA+GGG - chr7_3:67278542-67278561 None:intergenic 35.0%
! ACTTTTCCTGTGATGTTACA+AGG - chr7_3:67278543-67278562 None:intergenic 35.0%
AACATGTAGGCAAATAGAGA+AGG - chr7_3:67278892-67278911 None:intergenic 35.0%
ATGAATGATGTCGTTGAAGT+TGG - chr7_3:67278960-67278979 None:intergenic 35.0%
ATCAGCATCCATATCAATGA+TGG - chr7_3:67278984-67279003 None:intergenic 35.0%
! TTTCCTTCAACCTTTTCACT+TGG - chr7_3:67279293-67279312 None:intergenic 35.0%
!! AAAATGAAATTTTGGGAGGG+GGG - chr7_3:67279436-67279455 None:intergenic 35.0%
! GGGTAAAATGAAATTTTGGG+AGG - chr7_3:67279440-67279459 None:intergenic 35.0%
AGAGTCTCATACGAACCTTT+CGG - chr7_3:67274521-67274540 None:intergenic 40.0%
AAAGGGAAGGACGTAAAAGA+GGG - chr7_3:67274553-67274572 None:intergenic 40.0%
AAAAGGGAAGGACGTAAAAG+AGG - chr7_3:67274554-67274573 None:intergenic 40.0%
GAAAATGGGTAGACGGAAAA+GGG - chr7_3:67274570-67274589 None:intergenic 40.0%
GATTAAGGGGGAAGGAAAAT+GGG - chr7_3:67274584-67274603 None:intergenic 40.0%
TGATTAAGGGGGAAGGAAAA+TGG - chr7_3:67274585-67274604 None:intergenic 40.0%
ATTGTTGGATACCCTCGTAT+GGG + chr7_3:67275261-67275280 Msa1118520:CDS 40.0%
!! CTGATCTAAGAGCATCAATC+TGG + chr7_3:67275364-67275383 Msa1118520:CDS 40.0%
TGGAAACAGATGTCTGATGT+TGG + chr7_3:67275384-67275403 Msa1118520:CDS 40.0%
GGAAACAGATGTCTGATGTT+GGG + chr7_3:67275385-67275404 Msa1118520:CDS 40.0%
GTTTGATGAGTTAGTGACTC+TGG + chr7_3:67275632-67275651 Msa1118520:intron 40.0%
!! CCAATTCTGGGACAATAAAG+TGG - chr7_3:67275708-67275727 None:intergenic 40.0%
CCACTTTATTGTCCCAGAAT+TGG + chr7_3:67275705-67275724 Msa1118520:CDS 40.0%
AGAGTACACAAAGTTCACCT+CGG - chr7_3:67275734-67275753 None:intergenic 40.0%
CTTTGTGTACTCTTCTCACA+AGG + chr7_3:67275741-67275760 Msa1118520:CDS 40.0%
CAAGGCTGTTGAAGAATACA+AGG + chr7_3:67275759-67275778 Msa1118520:CDS 40.0%
TGAAGAATACAAGGAAGCCA+AGG + chr7_3:67275768-67275787 Msa1118520:CDS 40.0%
GAAAAAAACACATACCGCCT+TGG - chr7_3:67275788-67275807 None:intergenic 40.0%
GGGATCGAGTTTGAACATTA+TGG + chr7_3:67275982-67276001 Msa1118520:intron 40.0%
ACTAAGTGAAGCTAGCTACA+TGG - chr7_3:67276019-67276038 None:intergenic 40.0%
! ATGTAGCTAGCTTCACTTAG+TGG + chr7_3:67276018-67276037 Msa1118520:intron 40.0%
TCACTTAGTGGAATAAGGCT+TGG + chr7_3:67276030-67276049 Msa1118520:intron 40.0%
GGGTGAGTTTGAAAGATCTT+TGG + chr7_3:67276070-67276089 Msa1118520:intron 40.0%
TTCTGTTATGTTCACCTGTG+TGG + chr7_3:67276187-67276206 Msa1118520:intron 40.0%
GAGAGCAACAAGTATGAAAC+AGG - chr7_3:67276326-67276345 None:intergenic 40.0%
AAAGGATTTGTCAACTCCCT+TGG - chr7_3:67276357-67276376 None:intergenic 40.0%
GGAGGTTATTGCTGATCTTA+AGG + chr7_3:67276512-67276531 Msa1118520:CDS 40.0%
ACATGGAGACCTTCAAAAGA+AGG - chr7_3:67276639-67276658 None:intergenic 40.0%
AGTAGGTCTCAACAAGAACA+TGG - chr7_3:67276656-67276675 None:intergenic 40.0%
! ACTCTTGATTTGATCAAGGC+TGG + chr7_3:67276765-67276784 Msa1118520:CDS 40.0%
! GCAAAGATCCATTTTCCACT+GGG - chr7_3:67276795-67276814 None:intergenic 40.0%
! AGCAAAGATCCATTTTCCAC+TGG - chr7_3:67276796-67276815 None:intergenic 40.0%
AGTGGAAAATGGATCTTTGC+TGG + chr7_3:67276795-67276814 Msa1118520:CDS 40.0%
TCTTGTTAACGAGACCAAGT+TGG + chr7_3:67277045-67277064 Msa1118520:CDS 40.0%
TTTCTTAGCTGCAGACATTG+TGG + chr7_3:67277227-67277246 Msa1118520:intron 40.0%
CATCAGACAATTGTTAGCAG+TGG + chr7_3:67277362-67277381 Msa1118520:intron 40.0%
!! TGTTTTATTCAGGATCTCCG+AGG + chr7_3:67277943-67277962 Msa1118520:intron 40.0%
TGCCTTAATGTACTCTTCCT+CGG - chr7_3:67277963-67277982 None:intergenic 40.0%
AGATGATTAAAGCTGACCTC+GGG - chr7_3:67278058-67278077 None:intergenic 40.0%
GAGATGATTAAAGCTGACCT+CGG - chr7_3:67278059-67278078 None:intergenic 40.0%
TCTCTTCAAAACAGAAGAGG+CGG - chr7_3:67278160-67278179 None:intergenic 40.0%
GAATCGGCAATCTAACATCA+AGG - chr7_3:67278207-67278226 None:intergenic 40.0%
ACATCACCATAGATGATTGG+TGG - chr7_3:67278371-67278390 None:intergenic 40.0%
CTCACATCACCATAGATGAT+TGG - chr7_3:67278374-67278393 None:intergenic 40.0%
AGAAGACAGTCATTGCCTTT+GGG - chr7_3:67278400-67278419 None:intergenic 40.0%
CAGTAAGCATTCCCTTCATT+GGG - chr7_3:67278454-67278473 None:intergenic 40.0%
TTTCCTGTGATGTTACAAGG+GGG - chr7_3:67278540-67278559 None:intergenic 40.0%
CCTTAATAGCCAAAGCAATC+TGG - chr7_3:67278667-67278686 None:intergenic 40.0%
CCAGATTGCTTTGGCTATTA+AGG + chr7_3:67278664-67278683 Msa1118520:CDS 40.0%
GAAGTTGAAGACCTTGAGAA+AGG + chr7_3:67278689-67278708 Msa1118520:CDS 40.0%
!! TGGTGTCATCCAAATTGATG+AGG + chr7_3:67278718-67278737 Msa1118520:CDS 40.0%
TCAAAGCAGCCTCATCAATT+TGG - chr7_3:67278730-67278749 None:intergenic 40.0%
TCCTTCAGAATCACCAATGT+CGG + chr7_3:67278809-67278828 Msa1118520:CDS 40.0%
! ATAGAAGCTTTTCGTCGGAA+CGG - chr7_3:67279027-67279046 None:intergenic 40.0%
! GACTGATAGAAGCTTTTCGT+CGG - chr7_3:67279032-67279051 None:intergenic 40.0%
TTCCGTGAAGGAGTTGTTTA+TGG + chr7_3:67279052-67279071 Msa1118520:CDS 40.0%
CACCATAAACAACTCCTTCA+CGG - chr7_3:67279057-67279076 None:intergenic 40.0%
! GTTGTTTATGGTGCTGGAAT+TGG + chr7_3:67279064-67279083 Msa1118520:CDS 40.0%
AAGCATCTTGTTGATCCTGT+CGG - chr7_3:67279143-67279162 None:intergenic 40.0%
! TCCTTGAGAAGAACGTTTTG+TGG + chr7_3:67279167-67279186 Msa1118520:CDS 40.0%
! CCTTGAGAAGAACGTTTTGT+GGG + chr7_3:67279168-67279187 Msa1118520:CDS 40.0%
AAAAACCCGTAAGTACACAG+AGG + chr7_3:67279210-67279229 Msa1118520:CDS 40.0%
CTTAACCTCTGTGTACTTAC+GGG - chr7_3:67279218-67279237 None:intergenic 40.0%
GCTTAACCTCTGTGTACTTA+CGG - chr7_3:67279219-67279238 None:intergenic 40.0%
! AAGCTCGTTACGGATTTGTT+TGG - chr7_3:67279269-67279288 None:intergenic 40.0%
TTGCCAAGTGAAAAGGTTGA+AGG + chr7_3:67279287-67279306 Msa1118520:exon 40.0%
GACAATATCCTTGGAAACCA+TGG - chr7_3:67279621-67279640 None:intergenic 40.0%
TCCTCTACACTAACACCGAA+AGG + chr7_3:67274503-67274522 Msa1118520:five_prime_UTR 45.0%
!! ACCTTTCGGTGTTAGTGTAG+AGG - chr7_3:67274507-67274526 None:intergenic 45.0%
GGAAAATGGGTAGACGGAAA+AGG - chr7_3:67274571-67274590 None:intergenic 45.0%
GTTCTTGTTAGGTTTAGCGG+TGG - chr7_3:67274684-67274703 None:intergenic 45.0%
TCGCGATCCACTAGATTAGT+CGG + chr7_3:67275111-67275130 Msa1118520:intron 45.0%
AAGCTCGGTATCAGACCTAA+GGG - chr7_3:67275137-67275156 None:intergenic 45.0%
AAAGCTCGGTATCAGACCTA+AGG - chr7_3:67275138-67275157 None:intergenic 45.0%
CATTGTTGGATACCCTCGTA+TGG + chr7_3:67275260-67275279 Msa1118520:CDS 45.0%
ACTTGGTCATCTCCATAGCA+GGG - chr7_3:67275563-67275582 None:intergenic 45.0%
CATCGCAGTCACTTACTAGT+TGG - chr7_3:67275595-67275614 None:intergenic 45.0%
! GACTCTGGGTTGTATTGATC+TGG + chr7_3:67275647-67275666 Msa1118520:intron 45.0%
GAGTACACAAAGTTCACCTC+GGG - chr7_3:67275733-67275752 None:intergenic 45.0%
AGAATACAAGGAAGCCAAGG+CGG + chr7_3:67275771-67275790 Msa1118520:CDS 45.0%
ACTGTTGCCAAGTGAATGCT+TGG + chr7_3:67276154-67276173 Msa1118520:intron 45.0%
TACTCTGCCAAGCATTCACT+TGG - chr7_3:67276164-67276183 None:intergenic 45.0%
TGAAACAGGGCCAACAAGAA+CGG - chr7_3:67276312-67276331 None:intergenic 45.0%
TCTCCTATCTTTGCTTCCCA+AGG + chr7_3:67276379-67276398 Msa1118520:CDS 45.0%
CTTCTTACTTGTAGACGGCA+AGG - chr7_3:67276406-67276425 None:intergenic 45.0%
ATTGCTGATCTTAAGGCAGC+TGG + chr7_3:67276519-67276538 Msa1118520:CDS 45.0%
TCAAGATCCAGGACAAGTGT+GGG - chr7_3:67276570-67276589 None:intergenic 45.0%
TTCAAGATCCAGGACAAGTG+TGG - chr7_3:67276571-67276590 None:intergenic 45.0%
ACTTGTGAGCTTCAAGATCC+AGG - chr7_3:67276581-67276600 None:intergenic 45.0%
! GCACTCACACCTTCTTTTGA+AGG + chr7_3:67276627-67276646 Msa1118520:CDS 45.0%
AAGACCCTCACATCTTTGAG+TGG + chr7_3:67276702-67276721 Msa1118520:CDS 45.0%
GACACCACTCAAAGATGTGA+GGG - chr7_3:67276709-67276728 None:intergenic 45.0%
CTGGATTTCCCAGTGGAAAA+TGG + chr7_3:67276784-67276803 Msa1118520:CDS 45.0%
ATCTTTGCTGGAGTCGTTGA+TGG + chr7_3:67276807-67276826 Msa1118520:CDS 45.0%
! TCGTTGATGGAAGGAACATC+TGG + chr7_3:67276820-67276839 Msa1118520:CDS 45.0%
! CGTTGATGGAAGGAACATCT+GGG + chr7_3:67276821-67276840 Msa1118520:CDS 45.0%
CATCTGGGCAAATGATCTTG+AGG + chr7_3:67276836-67276855 Msa1118520:CDS 45.0%
GGCTTCTCTCAGTACATTAG+AGG + chr7_3:67276857-67276876 Msa1118520:CDS 45.0%
AGTACATTAGAGGCTCTTGC+CGG + chr7_3:67276867-67276886 Msa1118520:CDS 45.0%
AATACCTTTGCCCACAATGC+CGG - chr7_3:67276889-67276908 None:intergenic 45.0%
TAATGCACTTGCAGGCAACA+AGG + chr7_3:67277132-67277151 Msa1118520:CDS 45.0%
TGCAGAACTTGCAGAGAAGA+TGG - chr7_3:67277534-67277553 None:intergenic 45.0%
TTTCAGGCTGCTGCATTGAA+GGG + chr7_3:67277701-67277720 Msa1118520:intron 45.0%
!! TGGCACTGACATTAGTAGCA+CGG - chr7_3:67277739-67277758 None:intergenic 45.0%
TACTAATGTCAGTGCCAGGT+TGG + chr7_3:67277742-67277761 Msa1118520:CDS 45.0%
! CTTTTGTTGAGCATCCAACC+TGG - chr7_3:67277759-67277778 None:intergenic 45.0%
!! ATGATCCAATGGTGGTGGTT+GGG - chr7_3:67277802-67277821 None:intergenic 45.0%
!! AATGATCCAATGGTGGTGGT+TGG - chr7_3:67277803-67277822 None:intergenic 45.0%
! CTCCGAGGAAGAGTACATTA+AGG + chr7_3:67277958-67277977 Msa1118520:CDS 45.0%
CTTGAAGCTCAACAACTGAG+CGG - chr7_3:67278000-67278019 None:intergenic 45.0%
TCGCCTTTACTGCTAATGGA+TGG + chr7_3:67278315-67278334 Msa1118520:CDS 45.0%
! CGCCTTTACTGCTAATGGAT+GGG + chr7_3:67278316-67278335 Msa1118520:CDS 45.0%
CACCCATCCATTAGCAGTAA+AGG - chr7_3:67278321-67278340 None:intergenic 45.0%
AATGGATGGGTGCAATCCTA+TGG + chr7_3:67278329-67278348 Msa1118520:CDS 45.0%
CTTGACACAACGAGATCCAT+AGG - chr7_3:67278348-67278367 None:intergenic 45.0%
GTCAAGCCACCAATCATCTA+TGG + chr7_3:67278362-67278381 Msa1118520:CDS 45.0%
CAGAAGACAGTCATTGCCTT+TGG - chr7_3:67278401-67278420 None:intergenic 45.0%
CAAAGGCAATGACTGTCTTC+TGG + chr7_3:67278399-67278418 Msa1118520:CDS 45.0%
TTTACCAAGCGCCCAATGAA+GGG + chr7_3:67278440-67278459 Msa1118520:CDS 45.0%
CCAGTAAGCATTCCCTTCAT+TGG - chr7_3:67278455-67278474 None:intergenic 45.0%
CCAATGAAGGGAATGCTTAC+TGG + chr7_3:67278452-67278471 Msa1118520:CDS 45.0%
ACCAGTTGAGAATGGTGACA+GGG - chr7_3:67278478-67278497 None:intergenic 45.0%
AACGAAGGACCAGTTGAGAA+TGG - chr7_3:67278486-67278505 None:intergenic 45.0%
TTCCTGTGATGTTACAAGGG+GGG - chr7_3:67278539-67278558 None:intergenic 45.0%
GTTGAAGACCTTGAGAAAGG+TGG + chr7_3:67278692-67278711 Msa1118520:CDS 45.0%
GACCTTGAGAAAGGTGGTAT+TGG + chr7_3:67278698-67278717 Msa1118520:CDS 45.0%
CACCAATACCACCTTTCTCA+AGG - chr7_3:67278703-67278722 None:intergenic 45.0%
! CATTGGTGATTCTGAAGGAG+TGG - chr7_3:67278808-67278827 None:intergenic 45.0%
! ACCGACATTGGTGATTCTGA+AGG - chr7_3:67278813-67278832 None:intergenic 45.0%
! AATCACCAATGTCGGTGTTC+AGG + chr7_3:67278817-67278836 Msa1118520:CDS 45.0%
CTTGTGAGCCAAACATACCT+GGG - chr7_3:67278849-67278868 None:intergenic 45.0%
ACTTGTGAGCCAAACATACC+TGG - chr7_3:67278850-67278869 None:intergenic 45.0%
! TAGAAGCTTTTCGTCGGAAC+GGG - chr7_3:67279026-67279045 None:intergenic 45.0%
CTTCTATCAGTCTTCCGTGA+AGG + chr7_3:67279040-67279059 Msa1118520:CDS 45.0%
GAAGGAGTTGTTTATGGTGC+TGG + chr7_3:67279058-67279077 Msa1118520:CDS 45.0%
AGTGGATGTCATACACACCA+GGG - chr7_3:67279090-67279109 None:intergenic 45.0%
CCCACAAAACGTTCTTCTCA+AGG - chr7_3:67279171-67279190 None:intergenic 45.0%
TTCACTTGGCAAGCTCGTTA+CGG - chr7_3:67279279-67279298 None:intergenic 45.0%
AACGAGCTTGCCAAGTGAAA+AGG + chr7_3:67279280-67279299 Msa1118520:exon 45.0%
TCCAAATGTCTCTGTATCCG+TGG + chr7_3:67279474-67279493 Msa1118520:three_prime_UTR 45.0%
TAAAGATTGTGGCAGAGCCA+CGG - chr7_3:67279494-67279513 None:intergenic 45.0%
CCACGATGTGACAATATCCT+TGG - chr7_3:67279630-67279649 None:intergenic 45.0%
CCAAGGATATTGTCACATCG+TGG + chr7_3:67279627-67279646 Msa1118520:three_prime_UTR 45.0%
! TTGTCACATCGTGGTTTGCA+AGG + chr7_3:67279636-67279655 Msa1118520:three_prime_UTR 45.0%
ATGGGTAGACGGAAAAGGGA+AGG - chr7_3:67274566-67274585 None:intergenic 50.0%
GGGGAAGGAAAATGGGTAGA+CGG - chr7_3:67274577-67274596 None:intergenic 50.0%
GTTTAGCGGTGGATCTAGAG+TGG - chr7_3:67274673-67274692 None:intergenic 50.0%
CTAAGGGCCGACTAATCTAG+TGG - chr7_3:67275121-67275140 None:intergenic 50.0%
! CACTAGATTAGTCGGCCCTT+AGG + chr7_3:67275119-67275138 Msa1118520:intron 50.0%
! CAGTGCCGAGGATTTGAAGA+AGG + chr7_3:67275335-67275354 Msa1118520:CDS 50.0%
CTTGATACTACCGCCACTCT+CGG + chr7_3:67275453-67275472 Msa1118520:CDS 50.0%
CACTTGGTCATCTCCATAGC+AGG - chr7_3:67275564-67275583 None:intergenic 50.0%
CTGCTATGGAGATGACCAAG+TGG + chr7_3:67275562-67275581 Msa1118520:CDS 50.0%
!! CTAGTTGGTGTCGAACCACT+TGG - chr7_3:67275580-67275599 None:intergenic 50.0%
GACACTGTTCCCGTTCTTGT+TGG + chr7_3:67276299-67276318 Msa1118520:CDS 50.0%
GAAACAGGGCCAACAAGAAC+GGG - chr7_3:67276311-67276330 None:intergenic 50.0%
GGATTTGTCAACTCCCTTGG+CGG - chr7_3:67276354-67276373 None:intergenic 50.0%
GGACCTTGGGAAGCAAAGAT+AGG - chr7_3:67276385-67276404 None:intergenic 50.0%
TTGTAGACGGCAAGGACCTT+GGG - chr7_3:67276398-67276417 None:intergenic 50.0%
TGATGAACCCACACTTGTCC+TGG + chr7_3:67276560-67276579 Msa1118520:CDS 50.0%
AGCGGGAATATCAGCGAAGT+AGG - chr7_3:67276673-67276692 None:intergenic 50.0%
CGACACCACTCAAAGATGTG+AGG - chr7_3:67276710-67276729 None:intergenic 50.0%
ATCAAGGCTGGATTTCCCAG+TGG + chr7_3:67276777-67276796 Msa1118520:CDS 50.0%
! TTGCTGGAGTCGTTGATGGA+AGG + chr7_3:67276811-67276830 Msa1118520:CDS 50.0%
GTGAAGAAGTGAGCAGGAAG+TGG - chr7_3:67277014-67277033 None:intergenic 50.0%
AGCAGTGTGAAGAAGTGAGC+AGG - chr7_3:67277020-67277039 None:intergenic 50.0%
CTCACTTCTTCACACTGCTG+TGG + chr7_3:67277021-67277040 Msa1118520:CDS 50.0%
!! GCATTGGCTAATGCACTTGC+AGG + chr7_3:67277124-67277143 Msa1118520:CDS 50.0%
ACTTGCAGGCAACAAGGATG+AGG + chr7_3:67277138-67277157 Msa1118520:CDS 50.0%
CTCGTTAGTCACTCTTGGAG+AGG - chr7_3:67277576-67277595 None:intergenic 50.0%
CTCTCCAAGAGTGACTAACG+AGG + chr7_3:67277574-67277593 Msa1118520:CDS 50.0%
ACAGCCTCGTTAGTCACTCT+TGG - chr7_3:67277581-67277600 None:intergenic 50.0%
GACTAACGAGGCTGTTCAGA+AGG + chr7_3:67277586-67277605 Msa1118520:CDS 50.0%
CTTTCAGGCTGCTGCATTGA+AGG + chr7_3:67277700-67277719 Msa1118520:intron 50.0%
TGACATTAGTAGCACGGCGA+TGG - chr7_3:67277733-67277752 None:intergenic 50.0%
! GTGCTACTAATGTCAGTGCC+AGG + chr7_3:67277738-67277757 Msa1118520:CDS 50.0%
GTACTTTGGCGAGCAGTTGT+CGG + chr7_3:67278289-67278308 Msa1118520:CDS 50.0%
TACTTTGGCGAGCAGTTGTC+GGG + chr7_3:67278290-67278309 Msa1118520:CDS 50.0%
GGCTTCGCCTTTACTGCTAA+TGG + chr7_3:67278311-67278330 Msa1118520:CDS 50.0%
AGACAGTCATTGCCTTTGGG+CGG - chr7_3:67278397-67278416 None:intergenic 50.0%
CTTTACCAAGCGCCCAATGA+AGG + chr7_3:67278439-67278458 Msa1118520:CDS 50.0%
GACCAGTTGAGAATGGTGAC+AGG - chr7_3:67278479-67278498 None:intergenic 50.0%
! AGGCTGGTCAACTCTAACGA+AGG - chr7_3:67278501-67278520 None:intergenic 50.0%
TCGTTAGAGTTGACCAGCCT+AGG + chr7_3:67278501-67278520 Msa1118520:CDS 50.0%
GGTCGAGTTTATACCTAGGC+TGG - chr7_3:67278517-67278536 None:intergenic 50.0%
TCCTGTGATGTTACAAGGGG+GGG - chr7_3:67278538-67278557 None:intergenic 50.0%
GACCTGCTACCAGATTGCTT+TGG + chr7_3:67278655-67278674 Msa1118520:CDS 50.0%
AGCCAAAGCAATCTGGTAGC+AGG - chr7_3:67278660-67278679 None:intergenic 50.0%
!! TGATGAGGCTGCTTTGAGAG+AGG + chr7_3:67278733-67278752 Msa1118520:CDS 50.0%
!! GATGAGGCTGCTTTGAGAGA+GGG + chr7_3:67278734-67278753 Msa1118520:CDS 50.0%
TGGAGTAGCACATGTGAGTG+TGG - chr7_3:67278940-67278959 None:intergenic 50.0%
GAGTGGATGTCATACACACC+AGG - chr7_3:67279091-67279110 None:intergenic 50.0%
!! GTCAGTTGGTGGGATTCTTG+GGG - chr7_3:67279113-67279132 None:intergenic 50.0%
!! CGTCAGTTGGTGGGATTCTT+GGG - chr7_3:67279114-67279133 None:intergenic 50.0%
!! TCGTCAGTTGGTGGGATTCT+TGG - chr7_3:67279115-67279134 None:intergenic 50.0%
!!! GGGTTTTTAGCCCACAGTCA+GGG - chr7_3:67279198-67279217 None:intergenic 50.0%
TGCAGCAACCATGTTGAGGA+GGG - chr7_3:67279245-67279264 None:intergenic 50.0%
GCCACGGATACAGAGACATT+TGG - chr7_3:67279478-67279497 None:intergenic 50.0%
TAGGGCATAGTTTCACGCCA+TGG + chr7_3:67279601-67279620 Msa1118520:three_prime_UTR 50.0%
GTTTCACGCCATGGTTTCCA+AGG + chr7_3:67279610-67279629 Msa1118520:three_prime_UTR 50.0%
CTCTCTTGGGTCCCATACGA+GGG - chr7_3:67275275-67275294 None:intergenic 55.0%
TCTCTCTTGGGTCCCATACG+AGG - chr7_3:67275276-67275295 None:intergenic 55.0%
GGACAAAAAGAGCAGTGCCG+AGG + chr7_3:67275323-67275342 Msa1118520:CDS 55.0%
CCATCCATACCTGGGTGGAA+CGG - chr7_3:67275481-67275500 None:intergenic 55.0%
CCACCAGTCCATCCATACCT+GGG - chr7_3:67275489-67275508 None:intergenic 55.0%
ACCACCAGTCCATCCATACC+TGG - chr7_3:67275490-67275509 None:intergenic 55.0%
!! GGATGGACTGGTGGTGAGAT+TGG + chr7_3:67275495-67275514 Msa1118520:CDS 55.0%
TAATGCCACCGTCCCTGCTA+TGG + chr7_3:67275548-67275567 Msa1118520:CDS 55.0%
GGTCATCTCCATAGCAGGGA+CGG - chr7_3:67275559-67275578 None:intergenic 55.0%
TCACCTCGGGACCCAATTCT+GGG - chr7_3:67275720-67275739 None:intergenic 55.0%
TTCACCTCGGGACCCAATTC+TGG - chr7_3:67275721-67275740 None:intergenic 55.0%
TTGCTCTCCAAAGCCGCCAA+GGG + chr7_3:67276338-67276357 Msa1118520:CDS 55.0%
CTTGTAGACGGCAAGGACCT+TGG - chr7_3:67276399-67276418 None:intergenic 55.0%
CTTCGCTGATATTCCCGCTG+AGG + chr7_3:67276674-67276693 Msa1118520:CDS 55.0%
! AGGGTCTTGTATGCCTCAGC+GGG - chr7_3:67276690-67276709 None:intergenic 55.0%
! GAGGGTCTTGTATGCCTCAG+CGG - chr7_3:67276691-67276710 None:intergenic 55.0%
!! TTGAGTGGTGTCGCCGCTTA+TGG + chr7_3:67276717-67276736 Msa1118520:CDS 55.0%
CTCTGCAAGTTCTGCAGCTC+AGG + chr7_3:67277538-67277557 Msa1118520:CDS 55.0%
GTTCTGCAGCTCAGGCTTCA+AGG + chr7_3:67277546-67277565 Msa1118520:CDS 55.0%
!! ATGGTGGTGGTTGGGAGGAT+TGG - chr7_3:67277794-67277813 None:intergenic 55.0%
ATCCTCCCAACCACCACCAT+TGG + chr7_3:67277794-67277813 Msa1118520:CDS 55.0%
!! ATCCAATGGTGGTGGTTGGG+AGG - chr7_3:67277799-67277818 None:intergenic 55.0%
GGGGAATGATCCAATGGTGG+TGG - chr7_3:67277807-67277826 None:intergenic 55.0%
CTGGGGGAATGATCCAATGG+TGG - chr7_3:67277810-67277829 None:intergenic 55.0%
GGTCTGGGGGAATGATCCAA+TGG - chr7_3:67277813-67277832 None:intergenic 55.0%
TCCTTAGTTCCACGGTCTGG+GGG - chr7_3:67277826-67277845 None:intergenic 55.0%
CTCCTTAGTTCCACGGTCTG+GGG - chr7_3:67277827-67277846 None:intergenic 55.0%
CCTCCTTAGTTCCACGGTCT+GGG - chr7_3:67277828-67277847 None:intergenic 55.0%
CCAGACCGTGGAACTAAGGA+GGG + chr7_3:67277826-67277845 Msa1118520:CDS 55.0%
GCGAACCCTCCTTAGTTCCA+CGG - chr7_3:67277834-67277853 None:intergenic 55.0%
GAGGGTTCGCCGTGAATTCA+AGG + chr7_3:67277844-67277863 Msa1118520:CDS 55.0%
CATTCCCTTCATTGGGCGCT+TGG - chr7_3:67278447-67278466 None:intergenic 55.0%
GCCCTGTCACCATTCTCAAC+TGG + chr7_3:67278474-67278493 Msa1118520:CDS 55.0%
GGGGGGTCGAGTTTATACCT+AGG - chr7_3:67278521-67278540 None:intergenic 55.0%
ACCCCCCCTTGTAACATCAC+AGG + chr7_3:67278534-67278553 Msa1118520:intron 55.0%
TGAGAGAGGGACTACCACTG+AGG + chr7_3:67278747-67278766 Msa1118520:CDS 55.0%
GTCCAAGTAGTGAGCGTGCT+CGG - chr7_3:67278777-67278796 None:intergenic 55.0%
AGCACGCTCACTACTTGGAC+TGG + chr7_3:67278777-67278796 Msa1118520:CDS 55.0%
GCACGCTCACTACTTGGACT+GGG + chr7_3:67278778-67278797 Msa1118520:CDS 55.0%
GGAGTCCTGAACACCGACAT+TGG - chr7_3:67278825-67278844 None:intergenic 55.0%
GGACTCCACCCAGGTATGTT+TGG + chr7_3:67278838-67278857 Msa1118520:intron 55.0%
GTGAGCCAAACATACCTGGG+TGG - chr7_3:67278846-67278865 None:intergenic 55.0%
! TATGGTGCTGGAATTGGCCC+TGG + chr7_3:67279070-67279089 Msa1118520:CDS 55.0%
TTGGTGGGATTCTTGGGGAG+TGG - chr7_3:67279108-67279127 None:intergenic 55.0%
TTGTGGGTCAACCCTGACTG+TGG + chr7_3:67279184-67279203 Msa1118520:CDS 55.0%
TGTGGGTCAACCCTGACTGT+GGG + chr7_3:67279185-67279204 Msa1118520:CDS 55.0%
!!! CGGGTTTTTAGCCCACAGTC+AGG - chr7_3:67279199-67279218 None:intergenic 55.0%
TAAGCCTGCCCTCCTCAACA+TGG + chr7_3:67279234-67279253 Msa1118520:CDS 55.0%
CTGCAGCAACCATGTTGAGG+AGG - chr7_3:67279246-67279265 None:intergenic 55.0%
TGGCTGCAGCAACCATGTTG+AGG - chr7_3:67279249-67279268 None:intergenic 55.0%
CCGTTCCACCCAGGTATGGA+TGG + chr7_3:67275478-67275497 Msa1118520:CDS 60.0%
CCAGTCCATCCATACCTGGG+TGG - chr7_3:67275486-67275505 None:intergenic 60.0%
CCACCCAGGTATGGATGGAC+TGG + chr7_3:67275483-67275502 Msa1118520:CDS 60.0%
!! CCCAGGTATGGATGGACTGG+TGG + chr7_3:67275486-67275505 Msa1118520:CDS 60.0%
CATCTCCATAGCAGGGACGG+TGG - chr7_3:67275556-67275575 None:intergenic 60.0%
TGTCCCAGAATTGGGTCCCG+AGG + chr7_3:67275714-67275733 Msa1118520:CDS 60.0%
GTTGCTCTCCAAAGCCGCCA+AGG + chr7_3:67276337-67276356 Msa1118520:CDS 60.0%
GTCAACTCCCTTGGCGGCTT+TGG - chr7_3:67276348-67276367 None:intergenic 60.0%
AGAGGCTCTTGCCGGCATTG+TGG + chr7_3:67276875-67276894 Msa1118520:CDS 60.0%
GAGGCTCTTGCCGGCATTGT+GGG + chr7_3:67276876-67276895 Msa1118520:CDS 60.0%
CTTGCCGGCATTGTGGGCAA+AGG + chr7_3:67276882-67276901 Msa1118520:CDS 60.0%
TGGATCATTCCCCCAGACCG+TGG + chr7_3:67277814-67277833 Msa1118520:CDS 60.0%
TCCCCCAGACCGTGGAACTA+AGG + chr7_3:67277822-67277841 Msa1118520:CDS 60.0%
CCCAGACCGTGGAACTAAGG+AGG + chr7_3:67277825-67277844 Msa1118520:CDS 60.0%
CCCTCCTTAGTTCCACGGTC+TGG - chr7_3:67277829-67277848 None:intergenic 60.0%
! TGGTGATGTGAGCCGCCCAA+AGG + chr7_3:67278382-67278401 Msa1118520:CDS 60.0%
GTCCGAGCACGCTCACTACT+TGG + chr7_3:67278772-67278791 Msa1118520:CDS 60.0%
CGGCGATCTCGTCAGTTGGT+GGG - chr7_3:67279123-67279142 None:intergenic 60.0%
TCGGCGATCTCGTCAGTTGG+TGG - chr7_3:67279124-67279143 None:intergenic 60.0%
CTGTCGGCGATCTCGTCAGT+TGG - chr7_3:67279127-67279146 None:intergenic 60.0%
CAACTGACGAGATCGCCGAC+AGG + chr7_3:67279125-67279144 Msa1118520:CDS 60.0%
GCAACCATGTTGAGGAGGGC+AGG - chr7_3:67279241-67279260 None:intergenic 60.0%
CCTCGGGCTCTCCGTGTACT+AGG - chr7_3:67278042-67278061 None:intergenic 65.0%
CCTAGTACACGGAGAGCCCG+AGG + chr7_3:67278039-67278058 Msa1118520:CDS 65.0%
GCGTGCTCGGACTTCCTCAG+TGG - chr7_3:67278764-67278783 None:intergenic 65.0%
CGGTGTTCAGGACTCCACCC+AGG + chr7_3:67278829-67278848 Msa1118520:CDS 65.0%
! TGGAACGGCGCCGAGAGTGG+CGG - chr7_3:67275466-67275485 None:intergenic 70.0%
GGCGCCGTTCCACCCAGGTA+TGG + chr7_3:67275474-67275493 Msa1118520:CDS 70.0%
! GGGTGGAACGGCGCCGAGAG+TGG - chr7_3:67275469-67275488 None:intergenic 75.0%
CTCTCGGCGCCGTTCCACCC+AGG + chr7_3:67275469-67275488 Msa1118520:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 67274435 67279745 67274435 ID=Msa1118520;Name=Msa1118520
chr7_3 mRNA 67274435 67279745 67274435 ID=Msa1118520-mRNA-1;Parent=Msa1118520;Name=Msa1118520-mRNA-1;_AED=0.11;_eAED=0.11;_QI=94|1|1|1|0.83|0.69|13|408|763
chr7_3 exon 67274435 67274524 67274435 ID=Msa1118520-mRNA-1:exon:16458;Parent=Msa1118520-mRNA-1
chr7_3 exon 67275245 67275598 67275245 ID=Msa1118520-mRNA-1:exon:16459;Parent=Msa1118520-mRNA-1
chr7_3 exon 67275705 67275792 67275705 ID=Msa1118520-mRNA-1:exon:16460;Parent=Msa1118520-mRNA-1
chr7_3 exon 67276290 67276417 67276290 ID=Msa1118520-mRNA-1:exon:16461;Parent=Msa1118520-mRNA-1
chr7_3 exon 67276512 67276903 67276512 ID=Msa1118520-mRNA-1:exon:16462;Parent=Msa1118520-mRNA-1
chr7_3 exon 67276996 67277159 67276996 ID=Msa1118520-mRNA-1:exon:16463;Parent=Msa1118520-mRNA-1
chr7_3 exon 67277530 67277610 67277530 ID=Msa1118520-mRNA-1:exon:16464;Parent=Msa1118520-mRNA-1
chr7_3 exon 67277707 67277873 67277707 ID=Msa1118520-mRNA-1:exon:16465;Parent=Msa1118520-mRNA-1
chr7_3 exon 67277955 67278060 67277955 ID=Msa1118520-mRNA-1:exon:16466;Parent=Msa1118520-mRNA-1
chr7_3 exon 67278272 67278522 67278272 ID=Msa1118520-mRNA-1:exon:16467;Parent=Msa1118520-mRNA-1
chr7_3 exon 67278649 67278850 67278649 ID=Msa1118520-mRNA-1:exon:16468;Parent=Msa1118520-mRNA-1
chr7_3 exon 67278935 67279678 67278935 ID=Msa1118520-mRNA-1:exon:16469;Parent=Msa1118520-mRNA-1
chr7_3 exon 67279719 67279745 67279719 ID=Msa1118520-mRNA-1:exon:16470;Parent=Msa1118520-mRNA-1
chr7_3 five_prime_UTR 67274435 67274524 67274435 ID=Msa1118520-mRNA-1:five_prime_utr;Parent=Msa1118520-mRNA-1
chr7_3 five_prime_UTR 67275245 67275248 67275245 ID=Msa1118520-mRNA-1:five_prime_utr;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67275249 67275598 67275249 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67275705 67275792 67275705 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67276290 67276417 67276290 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67276512 67276903 67276512 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67276996 67277159 67276996 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67277530 67277610 67277530 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67277707 67277873 67277707 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67277955 67278060 67277955 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67278272 67278522 67278272 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67278649 67278850 67278649 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 CDS 67278935 67279297 67278935 ID=Msa1118520-mRNA-1:cds;Parent=Msa1118520-mRNA-1
chr7_3 three_prime_UTR 67279298 67279678 67279298 ID=Msa1118520-mRNA-1:three_prime_utr;Parent=Msa1118520-mRNA-1
chr7_3 three_prime_UTR 67279719 67279745 67279719 ID=Msa1118520-mRNA-1:three_prime_utr;Parent=Msa1118520-mRNA-1
Gene Sequence

>Msa1118520

ATGGCTTCTCACATTGTTGGATACCCTCGTATGGGACCCAAGAGAGAGTTGAAATTTGCTTTGGAATCATTCTGGGACAAAAAGAGCAGTGCCGAGGATTTGAAGAAGGTTTCTGCTGATCTAAGAGCATCAATCTGGAAACAGATGTCTGATGTTGGGATCAAGTATATCCCAAGCAACACTTTTACTTACTATGATCATGTACTTGATACTACCGCCACTCTCGGCGCCGTTCCACCCAGGTATGGATGGACTGGTGGTGAGATTGGATTCGATACTTACTTTTCAATGGCTAGAGGTAATGCCACCGTCCCTGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCAGAATTGGGTCCCGAGGTGAACTTTGTGTACTCTTCTCACAAGGCTGTTGAAGAATACAAGGAAGCCAAGGCGCTTGGAGTAGACACTGTTCCCGTTCTTGTTGGCCCTGTTTCATACTTGTTGCTCTCCAAAGCCGCCAAGGGAGTTGACAAATCCTTTGATCTCCTATCTTTGCTTCCCAAGGTCCTTGCCGTCTACAAGGAGGTTATTGCTGATCTTAAGGCAGCTGGTGCTCAGTTTATTCAATTTGATGAACCCACACTTGTCCTGGATCTTGAAGCTCACAAGTTACAAGCATTTACTGATGCATATGCAGCACTCACACCTTCTTTTGAAGGTCTCCATGTTCTTGTTGAGACCTACTTCGCTGATATTCCCGCTGAGGCATACAAGACCCTCACATCTTTGAGTGGTGTCGCCGCTTATGGATTTGATTTTGTCCGTGGAACTAAGACTCTTGATTTGATCAAGGCTGGATTTCCCAGTGGAAAATGGATCTTTGCTGGAGTCGTTGATGGAAGGAACATCTGGGCAAATGATCTTGAGGCTTCTCTCAGTACATTAGAGGCTCTTGCCGGCATTGTGGGCAAAGAGAGAATTGTTGTGTCCACTTCCTGCTCACTTCTTCACACTGCTGTGGATCTTGTTAACGAGACCAAGTTGGATGATGAAATTAAGTCATGGTTAGCTTTTGCTGCCCAAAAAGTTGTTGAAGTAAATGCATTGGCTAATGCACTTGCAGGCAACAAGGATGAGGCCATCTTCTCTGCAAGTTCTGCAGCTCAGGCTTCAAGGAAGTCCTCTCCAAGAGTGACTAACGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCAGACCATCGCCGTGCTACTAATGTCAGTGCCAGGTTGGATGCTCAACAAAAGAAGCTTAATCTTCCAATCCTCCCAACCACCACCATTGGATCATTCCCCCAGACCGTGGAACTAAGGAGGGTTCGCCGTGAATTCAAGGCTAAGAAGATCTCCGAGGAAGAGTACATTAAGGCAATTAAGGAGGAAATCCGCTCAGTTGTTGAGCTTCAAGAAGAGCTTGATATTGATGTCCTAGTACACGGAGAGCCCGAGAGGAATGATATGGTTGAGTACTTTGGCGAGCAGTTGTCGGGCTTCGCCTTTACTGCTAATGGATGGGTGCAATCCTATGGATCTCGTTGTGTCAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAGGCAATGACTGTCTTCTGGTCAGCTCTTGCTCAGAGCTTTACCAAGCGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTCGTTAGAGTTGACCAGCCTAGATCTGAGACCTGCTACCAGATTGCTTTGGCTATTAAGGATGAAGTTGAAGACCTTGAGAAAGGTGGTATTGGTGTCATCCAAATTGATGAGGCTGCTTTGAGAGAGGGACTACCACTGAGGAAGTCCGAGCACGCTCACTACTTGGACTGGGCTGTCCACTCCTTCAGAATCACCAATGTCGGTGTTCAGGACTCCACCCAGATCCACACTCACATGTGCTACTCCAACTTCAACGACATCATTCATTCCATCATTGATATGGATGCTGATGTTATCACAATTGAGAACTCCCGTTCCGACGAAAAGCTTCTATCAGTCTTCCGTGAAGGAGTTGTTTATGGTGCTGGAATTGGCCCTGGTGTGTATGACATCCACTCCCCAAGAATCCCACCAACTGACGAGATCGCCGACAGGATCAACAAGATGCTTGCTGTCCTTGAGAAGAACGTTTTGTGGGTCAACCCTGACTGTGGGCTAAAAACCCGTAAGTACACAGAGGTTAAGCCTGCCCTCCTCAACATGGTTGCTGCAGCCAAACAAATCCGTAACGAGCTTGCCAAGTGA
Protein sequence

>Msa1118520

MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLKKVSADLRASIWKQMSDVGIKYIPSNTFTYYDHVLDTTATLGAVPPRYGWTGGEIGFDTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPEVNFVYSSHKAVEEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFDLLSLLPKVLAVYKEVIADLKAAGAQFIQFDEPTLVLDLEAHKLQAFTDAYAALTPSFEGLHVLVETYFADIPAEAYKTLTSLSGVAAYGFDFVRGTKTLDLIKAGFPSGKWIFAGVVDGRNIWANDLEASLSTLEALAGIVGKERIVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQKVVEVNALANALAGNKDEAIFSASSAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKAKKISEEEYIKAIKEEIRSVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSALAQSFTKRPMKGMLTGPVTILNWSFVRVDQPRSETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAHYLDWAVHSFRITNVGVQDSTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVVYGAGIGPGVYDIHSPRIPPTDEIADRINKMLAVLEKNVLWVNPDCGLKTRKYTEVKPALLNMVAAAKQIRNELAK*