Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1073330 | XP_003625020.2 | 96.120 | 567 | 20 | 1 | 1 | 567 | 60 | 624 | 0.0 | 1109 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1073330 | sp|B8BHF1|GLO15_ORYSI | 57.345 | 565 | 237 | 3 | 1 | 561 | 54 | 618 | 0.0 | 695 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1073330 | A0A396H383 | 96.120 | 567 | 20 | 1 | 1 | 567 | 60 | 624 | 0.0 | 1109 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1033570 | Msa1073330 | 0.842003 | 3.372011e-58 | -8.615850e-47 |
Msa1073330 | Msa1105020 | 0.841138 | 5.699443e-58 | -8.615850e-47 |
Msa1073330 | Msa1160420 | 0.863549 | 2.299775e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1073330 | MtrunA17_Chr7g0256371 | 96.120 | 567 | 20 | 1 | 1 | 567 | 60 | 624 | 0.0 | 1109 |
Msa1073330 | MtrunA17_Chr7g0256391 | 89.065 | 567 | 62 | 0 | 1 | 567 | 51 | 617 | 0.0 | 1036 |
Msa1073330 | MtrunA17_Chr7g0256411 | 88.693 | 566 | 62 | 2 | 2 | 567 | 83 | 646 | 0.0 | 1019 |
Msa1073330 | MtrunA17_Chr4g0026761 | 80.961 | 562 | 107 | 0 | 1 | 562 | 51 | 612 | 0.0 | 939 |
Msa1073330 | MtrunA17_Chr8g0337081 | 66.607 | 563 | 187 | 1 | 1 | 562 | 54 | 616 | 0.0 | 765 |
Msa1073330 | MtrunA17_Chr8g0337101 | 61.812 | 563 | 213 | 2 | 1 | 561 | 90 | 652 | 0.0 | 733 |
Msa1073330 | MtrunA17_Chr4g0026811 | 83.452 | 423 | 70 | 0 | 1 | 423 | 37 | 459 | 0.0 | 715 |
Msa1073330 | MtrunA17_Chr4g0073231 | 32.867 | 572 | 373 | 4 | 3 | 563 | 55 | 626 | 2.18e-109 | 340 |
Msa1073330 | MtrunA17_Chr2g0305431 | 35.146 | 239 | 148 | 1 | 3 | 234 | 54 | 292 | 4.19e-51 | 177 |
Msa1073330 | MtrunA17_Chr4g0026821 | 72.222 | 90 | 25 | 0 | 422 | 511 | 4 | 93 | 3.12e-41 | 144 |
Msa1073330 | MtrunA17_Chr2g0305451 | 31.651 | 218 | 141 | 3 | 354 | 563 | 2 | 219 | 6.40e-28 | 111 |
Msa1073330 | MtrunA17_Chr4g0026831 | 84.091 | 44 | 7 | 0 | 519 | 562 | 1 | 44 | 9.71e-20 | 82.8 |
Msa1073330 | MtrunA17_Chr2g0305441 | 28.571 | 119 | 85 | 0 | 239 | 357 | 43 | 161 | 5.97e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1073330 | AT1G02205.4 | 58.554 | 567 | 229 | 2 | 1 | 561 | 55 | 621 | 0.0 | 682 |
Msa1073330 | AT1G02205.2 | 58.554 | 567 | 229 | 2 | 1 | 561 | 54 | 620 | 0.0 | 681 |
Msa1073330 | AT1G02205.3 | 58.217 | 572 | 228 | 2 | 1 | 561 | 54 | 625 | 0.0 | 678 |
Msa1073330 | AT1G02190.1 | 58.494 | 571 | 225 | 6 | 1 | 561 | 54 | 622 | 0.0 | 660 |
Msa1073330 | AT1G02190.2 | 58.144 | 571 | 223 | 7 | 1 | 561 | 54 | 618 | 0.0 | 652 |
Msa1073330 | AT2G37700.3 | 56.661 | 563 | 239 | 3 | 4 | 561 | 53 | 615 | 0.0 | 643 |
Msa1073330 | AT2G37700.1 | 56.306 | 563 | 232 | 4 | 4 | 561 | 53 | 606 | 0.0 | 634 |
Msa1073330 | AT2G37700.4 | 52.575 | 563 | 225 | 4 | 4 | 561 | 53 | 578 | 0.0 | 577 |
Msa1073330 | AT1G02205.1 | 54.566 | 449 | 198 | 2 | 119 | 561 | 8 | 456 | 6.80e-179 | 513 |
Msa1073330 | AT2G37700.2 | 57.619 | 420 | 177 | 1 | 4 | 422 | 53 | 472 | 9.18e-170 | 491 |
Msa1073330 | AT1G02205.5 | 52.406 | 374 | 172 | 2 | 194 | 561 | 8 | 381 | 1.85e-142 | 417 |
Msa1073330 | AT5G57800.1 | 34.079 | 581 | 366 | 8 | 3 | 567 | 53 | 632 | 9.78e-105 | 328 |
Find 143 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTATTTATGACTACATTTA+TGG | 0.042810 | 7_2:+70782374 | Msa1073330:CDS |
TGGAAGCCATATTATGAATT+TGG | 0.112185 | 7_2:-70780050 | None:intergenic |
GCCTAAACGCATTTGATAAA+TGG | 0.206081 | 7_2:-70782498 | None:intergenic |
TTCATCCCAAATTCATAATA+TGG | 0.212635 | 7_2:+70780044 | Msa1073330:five_prime_UTR |
CATTGATTTCATGAACAATA+TGG | 0.227693 | 7_2:+70781742 | Msa1073330:CDS |
TGCTTAGCACCGAGAAAGTA+TGG | 0.268407 | 7_2:+70785521 | Msa1073330:CDS |
AAGTAAGAGAGGAGTTTCTT+AGG | 0.281109 | 7_2:-70781788 | None:intergenic |
CATGCACTCATTACTCTTCT+TGG | 0.283707 | 7_2:-70785436 | None:intergenic |
CTTGATTGAAGAAACAATTA+TGG | 0.293400 | 7_2:+70782931 | Msa1073330:CDS |
GTAGTAATTTCAACACATTT+TGG | 0.294781 | 7_2:-70785731 | None:intergenic |
TTTGGAGGGAAATGAGAAAA+TGG | 0.296760 | 7_2:-70785219 | None:intergenic |
CACTCCATCACACCAAATTC+AGG | 0.298150 | 7_2:+70782330 | Msa1073330:CDS |
TAGAGGAAGTATATCGATAA+TGG | 0.303413 | 7_2:-70785619 | None:intergenic |
CCAACCCTCAAACATCTAAA+TGG | 0.304289 | 7_2:+70782537 | Msa1073330:CDS |
GAATGCTACACAACCAGATT+TGG | 0.313054 | 7_2:+70780477 | Msa1073330:CDS |
CCATAAATGTAGTCATAAAT+AGG | 0.314825 | 7_2:-70782374 | None:intergenic |
TCTTCTGTGGCTGCACTATA+TGG | 0.315140 | 7_2:+70781707 | Msa1073330:CDS |
ATGAACATTCCATCCTTCTA+AGG | 0.317589 | 7_2:-70785482 | None:intergenic |
GGAAGCCATATTATGAATTT+GGG | 0.323479 | 7_2:-70780049 | None:intergenic |
GATGAAAATAATGTAGTATA+TGG | 0.326327 | 7_2:-70780027 | None:intergenic |
TGAGTAGTTAGCCCTGAATT+TGG | 0.328701 | 7_2:-70782342 | None:intergenic |
AGCACTTGATTTGTCTCTTT+AGG | 0.336516 | 7_2:-70783936 | None:intergenic |
AGCTTATGACTTGGATTTGT+GGG | 0.338978 | 7_2:+70782597 | Msa1073330:CDS |
TCTTTGATGTGACTTGGTTA+TGG | 0.351802 | 7_2:+70780341 | Msa1073330:five_prime_UTR |
GGAGCAAAGGTGATAAGTTT+AGG | 0.355246 | 7_2:+70782968 | Msa1073330:CDS |
TATCGACTTGTTCGAATTCA+AGG | 0.358353 | 7_2:-70780556 | None:intergenic |
ACTTGCTTCCCATACTTTCT+CGG | 0.360626 | 7_2:-70785530 | None:intergenic |
AGCATTCTGATCAACATAAA+AGG | 0.365500 | 7_2:-70780461 | None:intergenic |
GCAGGTGGCTGTATTATATA+AGG | 0.367330 | 7_2:+70784818 | Msa1073330:intron |
TTTGTGAGAATATTCTTTAG+AGG | 0.382170 | 7_2:-70785571 | None:intergenic |
GGAATAATTCATGCCTTAGA+AGG | 0.384364 | 7_2:+70785469 | Msa1073330:CDS |
ATTATGGAGGCTGAGTTAAA+TGG | 0.386727 | 7_2:+70782947 | Msa1073330:CDS |
TCTTCGAGGCAAGTTCAATA+AGG | 0.388690 | 7_2:+70783959 | Msa1073330:CDS |
TCCATTTATCAAATGCGTTT+AGG | 0.391416 | 7_2:+70782497 | Msa1073330:CDS |
TATGACAAATGCTCCGCAAA+TGG | 0.395402 | 7_2:-70781635 | None:intergenic |
GAAACCTCTGGGGAGCTTCA+AGG | 0.397370 | 7_2:+70780101 | Msa1073330:five_prime_UTR |
GTCTGTAAGGATGCCTGGTT+TGG | 0.397427 | 7_2:-70780070 | None:intergenic |
CTCTTTCATATGGGGTGAAA+GGG | 0.398310 | 7_2:+70780415 | Msa1073330:five_prime_UTR |
TGAGAATATTCTTTAGAGGT+TGG | 0.401910 | 7_2:-70785567 | None:intergenic |
TGGGAAGCAAGTATTCTTCA+TGG | 0.404509 | 7_2:+70785541 | Msa1073330:CDS |
TGTTTGAGGGTTGGAAGCTA+AGG | 0.406043 | 7_2:-70782528 | None:intergenic |
GCATCCTTACAGACTGGCCT+TGG | 0.407256 | 7_2:+70780079 | Msa1073330:five_prime_UTR |
ATTGATTTCATGAACAATAT+GGG | 0.407915 | 7_2:+70781743 | Msa1073330:CDS |
ACCACATCTGGTGACTCCTT+TGG | 0.410013 | 7_2:-70782446 | None:intergenic |
GGAACTCTTTATATAGTGCT+TGG | 0.410899 | 7_2:-70780006 | None:intergenic |
ATAGCATATACTCTTTCATA+TGG | 0.411100 | 7_2:+70780405 | Msa1073330:five_prime_UTR |
AAAAGCAAGATTGTTGATAA+AGG | 0.411329 | 7_2:+70780533 | Msa1073330:CDS |
TTGTAGCTTAAGATCATTGA+AGG | 0.414295 | 7_2:-70782645 | None:intergenic |
TGTGAATTCATGAATGTAGT+AGG | 0.418846 | 7_2:-70785291 | None:intergenic |
GTATGAGAGATACTTCAAAA+TGG | 0.422668 | 7_2:-70781813 | None:intergenic |
GTGAAATAGAAATCCAAATC+TGG | 0.423701 | 7_2:-70780490 | None:intergenic |
AAAGAGTTCATACAAGTGAT+AGG | 0.424171 | 7_2:-70780923 | None:intergenic |
ATGAGTGCATGGCGTATTGC+TGG | 0.430094 | 7_2:+70785448 | Msa1073330:CDS |
AAGTTTAGGACTTCTAAATC+AGG | 0.430707 | 7_2:+70782982 | Msa1073330:CDS |
TTGAAGATAAAAGTTGTAGA+TGG | 0.435173 | 7_2:+70783876 | Msa1073330:CDS |
TCACGTTACCAAACTGCTAA+AGG | 0.436168 | 7_2:+70780509 | Msa1073330:CDS |
AATTAACCAAGTGTGACAAA+TGG | 0.438907 | 7_2:+70785592 | Msa1073330:exon |
ACTGCACTAGTATATTATAT+AGG | 0.441560 | 7_2:+70780719 | Msa1073330:CDS |
ATGATCTTAAGCTACAAAGT+TGG | 0.442074 | 7_2:+70782651 | Msa1073330:CDS |
AGAGGAAGTATATCGATAAT+GGG | 0.448082 | 7_2:-70785618 | None:intergenic |
GATACCATTTAGATGTTTGA+GGG | 0.449852 | 7_2:-70782541 | None:intergenic |
GATAACGAGAGTATAAATAA+TGG | 0.451529 | 7_2:-70780868 | None:intergenic |
TAGCATATACTCTTTCATAT+GGG | 0.452930 | 7_2:+70780406 | Msa1073330:five_prime_UTR |
CATAATATGGCTTCCAAACC+AGG | 0.454942 | 7_2:+70780057 | Msa1073330:five_prime_UTR |
TATGAGAGATACTTCAAAAT+GGG | 0.456294 | 7_2:-70781812 | None:intergenic |
TATGGTTAGTTGGAGATGAA+TGG | 0.456856 | 7_2:+70785151 | Msa1073330:CDS |
AGCTTAGAGAACATTGTAAA+GGG | 0.462318 | 7_2:-70782578 | None:intergenic |
GGAAATATAGCTTGGTACAC+TGG | 0.463338 | 7_2:-70780440 | None:intergenic |
CCAACCTTTGGAGTATTGAT+TGG | 0.465706 | 7_2:-70784900 | None:intergenic |
AGGATACATGATATTTCCTA+TGG | 0.467393 | 7_2:+70780739 | Msa1073330:CDS |
GTTTCCAAGGCCAGTCTGTA+AGG | 0.467818 | 7_2:-70780083 | None:intergenic |
AAGCTTATGACTTGGATTTG+TGG | 0.468355 | 7_2:+70782596 | Msa1073330:CDS |
GTAGTAGGAGTAATCATTGC+TGG | 0.470094 | 7_2:-70785276 | None:intergenic |
GGTGTTGCTTTCTAAAACAA+AGG | 0.470122 | 7_2:-70782624 | None:intergenic |
TCTTTGTCTTTGATGTGACT+TGG | 0.472617 | 7_2:+70780335 | Msa1073330:five_prime_UTR |
GGCCAGTCTGTAAGGATGCC+TGG | 0.476832 | 7_2:-70780075 | None:intergenic |
ATTAACCAAGTGTGACAAAT+GGG | 0.477221 | 7_2:+70785593 | Msa1073330:exon |
TGTGTTAAATGCACCACATC+TGG | 0.479074 | 7_2:-70782458 | None:intergenic |
ATCTAAAAGATATGGTTAGT+TGG | 0.480880 | 7_2:+70785141 | Msa1073330:intron |
AGATACCATTTAGATGTTTG+AGG | 0.483611 | 7_2:-70782542 | None:intergenic |
AGACTGGCCTTGGAAACCTC+TGG | 0.487844 | 7_2:+70780089 | Msa1073330:five_prime_UTR |
GACTGGCCTTGGAAACCTCT+GGG | 0.488240 | 7_2:+70780090 | Msa1073330:five_prime_UTR |
ACTCTTTCATATGGGGTGAA+AGG | 0.491070 | 7_2:+70780414 | Msa1073330:five_prime_UTR |
CCATTTAGATGTTTGAGGGT+TGG | 0.492002 | 7_2:-70782537 | None:intergenic |
ATGGGATGAATATGAGCAAA+TGG | 0.495092 | 7_2:+70785170 | Msa1073330:CDS |
GGGAACCCATTTGTCACACT+TGG | 0.495754 | 7_2:-70785598 | None:intergenic |
AAGCTTAGAGAACATTGTAA+AGG | 0.498475 | 7_2:-70782579 | None:intergenic |
ATGGTTAGTTGGAGATGAAT+GGG | 0.501106 | 7_2:+70785152 | Msa1073330:CDS |
CTATGGCTTCTAATTTACCA+TGG | 0.513639 | 7_2:+70780756 | Msa1073330:CDS |
ATAAACAATGTTGTTAACAT+TGG | 0.513902 | 7_2:-70781677 | None:intergenic |
ATGACAAATGCTCCGCAAAT+GGG | 0.515132 | 7_2:-70781634 | None:intergenic |
GGTATGAACAATGATCCTTT+CGG | 0.516935 | 7_2:-70785198 | None:intergenic |
ACAAATCAAGTGCTTCTTCG+AGG | 0.524077 | 7_2:+70783945 | Msa1073330:CDS |
GAAATTGAAACATGGATACA+TGG | 0.528938 | 7_2:-70785709 | None:intergenic |
GCTTATAGATCTTAGACAAA+GGG | 0.537060 | 7_2:+70784845 | Msa1073330:CDS |
AGCTTATAGATCTTAGACAA+AGG | 0.539004 | 7_2:+70784844 | Msa1073330:CDS |
TGTTCTCTAAGCTTATGACT+TGG | 0.540236 | 7_2:+70782588 | Msa1073330:CDS |
ACTGTGAACATTATATTCAA+AGG | 0.541828 | 7_2:+70783844 | Msa1073330:CDS |
TAATCATTGCTGGTGTATAG+TGG | 0.543081 | 7_2:-70785266 | None:intergenic |
AGCTGTGACACACCCATTTG+CGG | 0.546338 | 7_2:+70781622 | Msa1073330:intron |
AAGTCGATAGAGAAACCAAT+TGG | 0.548372 | 7_2:+70780570 | Msa1073330:CDS |
TAGCCCTGAATTTGGTGTGA+TGG | 0.550314 | 7_2:-70782334 | None:intergenic |
ACTCCATCACACCAAATTCA+GGG | 0.553923 | 7_2:+70782331 | Msa1073330:CDS |
CATCATGTCGAAAGAAAGCT+TGG | 0.558066 | 7_2:+70784869 | Msa1073330:CDS |
TAATTCATGCCTTAGAAGGA+TGG | 0.560259 | 7_2:+70785473 | Msa1073330:CDS |
ACATAAAAGGAAATATAGCT+TGG | 0.563782 | 7_2:-70780448 | None:intergenic |
CTCCTTTGGTCTAATCAATG+AGG | 0.565009 | 7_2:-70782432 | None:intergenic |
CTTACAGCAATATTGCATGC+TGG | 0.570938 | 7_2:+70780800 | Msa1073330:CDS |
GCTCAGTGACAATTGAAGAA+TGG | 0.571470 | 7_2:-70780901 | None:intergenic |
GGCTGAGTTAAATGGAGCAA+AGG | 0.578535 | 7_2:+70782955 | Msa1073330:CDS |
TTCACCAATCAATACTCCAA+AGG | 0.582765 | 7_2:+70784896 | Msa1073330:CDS |
TCTGCATAAAGCATTAGCAA+TGG | 0.584639 | 7_2:-70783991 | None:intergenic |
CATGAATTCACACTCTTGTG+AGG | 0.587054 | 7_2:+70785302 | Msa1073330:CDS |
GTTTGTTATGCATTAATACA+CGG | 0.587856 | 7_2:+70785652 | Msa1073330:three_prime_UTR |
AAGCTCCCCAGAGGTTTCCA+AGG | 0.587944 | 7_2:-70780096 | None:intergenic |
AACAAACTTTGTCAAAGTAG+AGG | 0.588982 | 7_2:-70785636 | None:intergenic |
ACCAAAGGAGTCACCAGATG+TGG | 0.589164 | 7_2:+70782445 | Msa1073330:CDS |
GGCTTCATATGTAGCATCTG+TGG | 0.589327 | 7_2:-70782411 | None:intergenic |
AGCCTCATTGATTAGACCAA+AGG | 0.589348 | 7_2:+70782430 | Msa1073330:CDS |
GCTTAGCACCGAGAAAGTAT+GGG | 0.590984 | 7_2:+70785522 | Msa1073330:CDS |
CAAGAAGAGTAATGAGTGCA+TGG | 0.592300 | 7_2:+70785437 | Msa1073330:CDS |
AACCAGGCATCCTTACAGAC+TGG | 0.594883 | 7_2:+70780073 | Msa1073330:five_prime_UTR |
TTACCATGGTGGAGAACAGA+TGG | 0.597460 | 7_2:+70780770 | Msa1073330:CDS |
CATGGTAAATTAGAAGCCAT+AGG | 0.599980 | 7_2:-70780755 | None:intergenic |
ATATGCTATGAGCAATCCAC+GGG | 0.601636 | 7_2:-70780391 | None:intergenic |
AGCATATACTCTTTCATATG+GGG | 0.606631 | 7_2:+70780407 | Msa1073330:five_prime_UTR |
GGATGGAATGTTCATGAATG+TGG | 0.610974 | 7_2:+70785490 | Msa1073330:CDS |
AGTTCGTGATTCTAAGCCCG+TGG | 0.612195 | 7_2:+70780375 | Msa1073330:five_prime_UTR |
TTTAGGAATGTTGTTCAACA+CGG | 0.612745 | 7_2:-70783919 | None:intergenic |
AATGGTATCTACATTTAATG+TGG | 0.614475 | 7_2:+70782555 | Msa1073330:CDS |
TCAAAATGGGAAAGTAAGAG+AGG | 0.615999 | 7_2:-70781799 | None:intergenic |
TCAACACGGTTGCAGCAGCT+AGG | 0.626529 | 7_2:-70783905 | None:intergenic |
GATTGAAGAAACAATTATGG+AGG | 0.627286 | 7_2:+70782934 | Msa1073330:CDS |
TGGCTTCTAATTTACCATGG+TGG | 0.628032 | 7_2:+70780759 | Msa1073330:CDS |
TATATGCTATGAGCAATCCA+CGG | 0.638673 | 7_2:-70780392 | None:intergenic |
AATATTGCATGCTGGACCAG+TGG | 0.640771 | 7_2:+70780808 | Msa1073330:CDS |
GAGCAAATGGAAGCACCGAA+AGG | 0.641337 | 7_2:+70785183 | Msa1073330:CDS |
TCATTGCTGGTGTATAGTGG+TGG | 0.652055 | 7_2:-70785263 | None:intergenic |
TATACCAAGATTTAAAACAC+AGG | 0.658845 | 7_2:+70782676 | Msa1073330:CDS |
ACACCATCTGTTCTCCACCA+TGG | 0.679185 | 7_2:-70780773 | None:intergenic |
ACTGGCCTTGGAAACCTCTG+GGG | 0.699980 | 7_2:+70780091 | Msa1073330:five_prime_UTR |
AGAACCTTGAAGCTCCCCAG+AGG | 0.725693 | 7_2:-70780105 | None:intergenic |
ATGGTGGAGAACAGATGGTG+TGG | 0.733193 | 7_2:+70780775 | Msa1073330:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATAAATATTCTTTTTTAC+AGG | - | chr7_2:70781950-70781969 | None:intergenic | 10.0% |
!!! | AAATGTTATGAAATTTTATA+GGG | + | chr7_2:70782150-70782169 | Msa1073330:intron | 10.0% |
!! | TATTTACTAAATTAATAGAA+GGG | - | chr7_2:70783021-70783040 | None:intergenic | 10.0% |
!! | ATATTTACTAAATTAATAGA+AGG | - | chr7_2:70783022-70783041 | None:intergenic | 10.0% |
!!! | TTTTTCTATTGTTTTTTTAA+AGG | + | chr7_2:70783106-70783125 | Msa1073330:intron | 10.0% |
!!! | TTTTCTATTGTTTTTTTAAA+GGG | + | chr7_2:70783107-70783126 | Msa1073330:intron | 10.0% |
!!! | AACTTTTATATATATCTTTA+TGG | + | chr7_2:70783752-70783771 | Msa1073330:intron | 10.0% |
!! | ATATAAAATGAAATATATAG+TGG | - | chr7_2:70784134-70784153 | None:intergenic | 10.0% |
!! | AAATTAATTAATTAACCATT+TGG | + | chr7_2:70784315-70784334 | Msa1073330:intron | 10.0% |
!! | AATTAATTAATTAACCATTT+GGG | + | chr7_2:70784316-70784335 | Msa1073330:intron | 10.0% |
!!! | AAACATACAATTTTTTTTTA+AGG | + | chr7_2:70784556-70784575 | Msa1073330:intron | 10.0% |
!! | GATAAAGAGAAATATTTAAA+GGG | - | chr7_2:70780606-70780625 | None:intergenic | 15.0% |
!! | AGATAAAGAGAAATATTTAA+AGG | - | chr7_2:70780607-70780626 | None:intergenic | 15.0% |
!!! | GTCAAATTTGTTTATAATTA+GGG | - | chr7_2:70781009-70781028 | None:intergenic | 15.0% |
!!! | AGTCAAATTTGTTTATAATT+AGG | - | chr7_2:70781010-70781029 | None:intergenic | 15.0% |
!!! | ATAAACAAATTTGACTTTTT+TGG | + | chr7_2:70781014-70781033 | Msa1073330:intron | 15.0% |
!!! | AAAAATGTTGTTTATAAATG+TGG | + | chr7_2:70781194-70781213 | Msa1073330:intron | 15.0% |
!! | TAGGTTTAGTAAATTAAATA+CGG | + | chr7_2:70781222-70781241 | Msa1073330:intron | 15.0% |
!!! | ATGTATTTTTTAATGTCTAA+AGG | - | chr7_2:70781307-70781326 | None:intergenic | 15.0% |
!! | CTATAAAATTTCATAACATT+TGG | - | chr7_2:70782151-70782170 | None:intergenic | 15.0% |
!!! | CAAATGTTATGAAATTTTAT+AGG | + | chr7_2:70782149-70782168 | Msa1073330:intron | 15.0% |
!! | ATTTACTAAATTAATAGAAG+GGG | - | chr7_2:70783020-70783039 | None:intergenic | 15.0% |
!! | TAAATAAACATTAGTTACTA+CGG | + | chr7_2:70784172-70784191 | Msa1073330:intron | 15.0% |
!! | ATTAATTAATTAACCATTTG+GGG | + | chr7_2:70784317-70784336 | Msa1073330:intron | 15.0% |
!! | CATTAAATATGAATACTTAA+GGG | - | chr7_2:70784485-70784504 | None:intergenic | 15.0% |
!! | ACATTAAATATGAATACTTA+AGG | - | chr7_2:70784486-70784505 | None:intergenic | 15.0% |
!!! | AATTTTTAGATTAGAAACTA+GGG | - | chr7_2:70785688-70785707 | None:intergenic | 15.0% |
!!! | AAATTTTTAGATTAGAAACT+AGG | - | chr7_2:70785689-70785708 | None:intergenic | 15.0% |
!!! | GTTAATTTTATTTTGTAAGA+AGG | + | chr7_2:70785766-70785785 | Msa1073330:three_prime_UTR | 15.0% |
!! | GATGAAAATAATGTAGTATA+TGG | - | chr7_2:70780030-70780049 | None:intergenic | 20.0% |
!!! | AATTTGTTTATAATTAGGGA+CGG | - | chr7_2:70781005-70781024 | None:intergenic | 20.0% |
!!! | ATATGCAAATTTGACTTTTT+TGG | - | chr7_2:70781103-70781122 | None:intergenic | 20.0% |
!! | AGTCAAATTTGCATATAATT+AGG | + | chr7_2:70781107-70781126 | Msa1073330:intron | 20.0% |
!! | GTCAAATTTGCATATAATTA+GGG | + | chr7_2:70781108-70781127 | Msa1073330:intron | 20.0% |
!! | ATAATATAGACAGACTATAA+TGG | + | chr7_2:70781142-70781161 | Msa1073330:intron | 20.0% |
!! | TCTTGTACTTAAACATAATT+TGG | - | chr7_2:70781348-70781367 | None:intergenic | 20.0% |
!! | GTATATTTGAACATAAATTG+TGG | - | chr7_2:70781389-70781408 | None:intergenic | 20.0% |
!! | TATAAATTCTTGTCCAAATT+TGG | + | chr7_2:70781548-70781567 | Msa1073330:intron | 20.0% |
!! | AAATTAATTGAGACCAAATT+TGG | - | chr7_2:70781564-70781583 | None:intergenic | 20.0% |
!! | AAATTTGGTCTCAATTAATT+TGG | + | chr7_2:70781563-70781582 | Msa1073330:intron | 20.0% |
!!! | ACAACTTTCTTATGTTTTTT+TGG | + | chr7_2:70781598-70781617 | Msa1073330:intron | 20.0% |
!! | ATAAACAATGTTGTTAACAT+TGG | - | chr7_2:70781680-70781699 | None:intergenic | 20.0% |
!!! | ATTGATTTCATGAACAATAT+GGG | + | chr7_2:70781743-70781762 | Msa1073330:CDS | 20.0% |
!! | TAAGAAGTGATATAATTGAA+GGG | - | chr7_2:70781918-70781937 | None:intergenic | 20.0% |
!! | ATAAGAAGTGATATAATTGA+AGG | - | chr7_2:70781919-70781938 | None:intergenic | 20.0% |
!!! | TACATGTTATTTTTTACCAT+TGG | + | chr7_2:70781989-70782008 | Msa1073330:intron | 20.0% |
!! | TTTGAGAAATACTACAAAAT+AGG | - | chr7_2:70782887-70782906 | None:intergenic | 20.0% |
!!! | ATTTTGTAGTATTTCTCAAA+AGG | + | chr7_2:70782887-70782906 | Msa1073330:intron | 20.0% |
!!! | TTTTGTAGTATTTCTCAAAA+GGG | + | chr7_2:70782888-70782907 | Msa1073330:intron | 20.0% |
!! | TCATGATTATATAATCTGAA+CGG | + | chr7_2:70783468-70783487 | Msa1073330:intron | 20.0% |
!!! | TTTTTTGTGCTAAAATCTAT+CGG | - | chr7_2:70783658-70783677 | None:intergenic | 20.0% |
!! | TTCAGATTTATCCTATTTAT+CGG | - | chr7_2:70783731-70783750 | None:intergenic | 20.0% |
!!! | TTTGATTTGAATAACATTGA+TGG | + | chr7_2:70783796-70783815 | Msa1073330:intron | 20.0% |
!!! | TTGATTTGAATAACATTGAT+GGG | + | chr7_2:70783797-70783816 | Msa1073330:intron | 20.0% |
!! | TTAAAAAGTCAGTAATAAGA+AGG | - | chr7_2:70784429-70784448 | None:intergenic | 20.0% |
!! | ACAAATTAATTATGAGTGAT+TGG | + | chr7_2:70784587-70784606 | Msa1073330:intron | 20.0% |
!! | TTTATCTCATCTAAAAGATA+TGG | + | chr7_2:70785133-70785152 | Msa1073330:intron | 20.0% |
!! | ATGTATTTATGTAACAGAAT+TGG | + | chr7_2:70785410-70785429 | Msa1073330:intron | 20.0% |
! | TTCATCCCAAATTCATAATA+TGG | + | chr7_2:70780044-70780063 | Msa1073330:five_prime_UTR | 25.0% |
! | ATAGCATATACTCTTTCATA+TGG | + | chr7_2:70780405-70780424 | Msa1073330:five_prime_UTR | 25.0% |
! | TAGCATATACTCTTTCATAT+GGG | + | chr7_2:70780406-70780425 | Msa1073330:five_prime_UTR | 25.0% |
! | ACATAAAAGGAAATATAGCT+TGG | - | chr7_2:70780451-70780470 | None:intergenic | 25.0% |
!! | AAAAGCAAGATTGTTGATAA+AGG | + | chr7_2:70780533-70780552 | Msa1073330:CDS | 25.0% |
! | ACTGCACTAGTATATTATAT+AGG | + | chr7_2:70780719-70780738 | Msa1073330:CDS | 25.0% |
!! | GATAACGAGAGTATAAATAA+TGG | - | chr7_2:70780871-70780890 | None:intergenic | 25.0% |
! | CATTCAATTATTGATGTATG+TGG | + | chr7_2:70781039-70781058 | Msa1073330:intron | 25.0% |
! | AATTTGCATATAATTAGGGA+CGG | + | chr7_2:70781112-70781131 | Msa1073330:intron | 25.0% |
! | GTTTATAAATGTGGTTAACT+AGG | + | chr7_2:70781203-70781222 | Msa1073330:intron | 25.0% |
! | GTAAATCACATTCAAAATTG+TGG | - | chr7_2:70781285-70781304 | None:intergenic | 25.0% |
! | GTACTTAAACATAATTTGGA+TGG | - | chr7_2:70781344-70781363 | None:intergenic | 25.0% |
!!! | GATTAATTGTGTTATTTGCA+TGG | + | chr7_2:70781442-70781461 | Msa1073330:intron | 25.0% |
! | GTTTATCAAAAAATCTTCTG+TGG | + | chr7_2:70781694-70781713 | Msa1073330:CDS | 25.0% |
!!! | CATTGATTTCATGAACAATA+TGG | + | chr7_2:70781742-70781761 | Msa1073330:CDS | 25.0% |
! | TATGAGAGATACTTCAAAAT+GGG | - | chr7_2:70781815-70781834 | None:intergenic | 25.0% |
! | TAAGTTTACAATGTTACTGT+TGG | + | chr7_2:70781845-70781864 | Msa1073330:intron | 25.0% |
! | GAACTAAAACAAAATTCCAA+TGG | - | chr7_2:70782008-70782027 | None:intergenic | 25.0% |
! | TTGTGCAACTTATATTTAAG+GGG | - | chr7_2:70782084-70782103 | None:intergenic | 25.0% |
! | GTTGTGCAACTTATATTTAA+GGG | - | chr7_2:70782085-70782104 | None:intergenic | 25.0% |
! | ATACAAATTTATTTGCTCCA+TGG | + | chr7_2:70782290-70782309 | Msa1073330:intron | 25.0% |
! | CCATAAATGTAGTCATAAAT+AGG | - | chr7_2:70782377-70782396 | None:intergenic | 25.0% |
! | CCTATTTATGACTACATTTA+TGG | + | chr7_2:70782374-70782393 | Msa1073330:CDS | 25.0% |
! | AATGGTATCTACATTTAATG+TGG | + | chr7_2:70782555-70782574 | Msa1073330:CDS | 25.0% |
!! | TATACCAAGATTTAAAACAC+AGG | + | chr7_2:70782676-70782695 | Msa1073330:CDS | 25.0% |
!!! | AATACCTGTGTTTTAAATCT+TGG | - | chr7_2:70782683-70782702 | None:intergenic | 25.0% |
!! | ATCTAAAATCACAAATGAGA+AGG | - | chr7_2:70782715-70782734 | None:intergenic | 25.0% |
!!! | TTTTTAACTGAATCAAGAGA+AGG | - | chr7_2:70782797-70782816 | None:intergenic | 25.0% |
! | TAAAAAATTTGCATTCTCTG+TGG | + | chr7_2:70782821-70782840 | Msa1073330:intron | 25.0% |
! | CTTGATTGAAGAAACAATTA+TGG | + | chr7_2:70782931-70782950 | Msa1073330:CDS | 25.0% |
! | AGGGAAAATATTAGTATTGT+TGG | + | chr7_2:70783126-70783145 | Msa1073330:intron | 25.0% |
! | ATTCGGAAGTTATAATTGAT+TGG | - | chr7_2:70783301-70783320 | None:intergenic | 25.0% |
! | TGGTTGGAAATAAAATCATT+CGG | - | chr7_2:70783318-70783337 | None:intergenic | 25.0% |
! | AGCAATCATCAAAATCTTAT+GGG | + | chr7_2:70783364-70783383 | Msa1073330:intron | 25.0% |
!!! | ATTCAAATGGCTTTTTTTTG+GGG | - | chr7_2:70783627-70783646 | None:intergenic | 25.0% |
!!! | CATTCAAATGGCTTTTTTTT+GGG | - | chr7_2:70783628-70783647 | None:intergenic | 25.0% |
!!! | TCATTCAAATGGCTTTTTTT+TGG | - | chr7_2:70783629-70783648 | None:intergenic | 25.0% |
! | AAAAAAAGCCATTTGAATGA+TGG | + | chr7_2:70783629-70783648 | Msa1073330:intron | 25.0% |
!!! | GATAGATTTTAGCACAAAAA+AGG | + | chr7_2:70783657-70783676 | Msa1073330:intron | 25.0% |
! | AAAAATACGTTCCGATAAAT+AGG | + | chr7_2:70783717-70783736 | Msa1073330:intron | 25.0% |
! | TGGAATTCGAAGTAAAATAA+TGG | + | chr7_2:70783772-70783791 | Msa1073330:intron | 25.0% |
! | ACTGTGAACATTATATTCAA+AGG | + | chr7_2:70783844-70783863 | Msa1073330:CDS | 25.0% |
!! | CAACTTTTATCTTCAATTGT+GGG | - | chr7_2:70783872-70783891 | None:intergenic | 25.0% |
!! | ACAACTTTTATCTTCAATTG+TGG | - | chr7_2:70783873-70783892 | None:intergenic | 25.0% |
! | TTGAAGATAAAAGTTGTAGA+TGG | + | chr7_2:70783876-70783895 | Msa1073330:CDS | 25.0% |
! | TTTATGCAGAAAAAATGTAC+AGG | + | chr7_2:70784004-70784023 | Msa1073330:CDS | 25.0% |
! | TCACTGTCTCATAATAAATA+TGG | - | chr7_2:70784262-70784281 | None:intergenic | 25.0% |
! | AATATGATTAACTCAAGTAG+AGG | + | chr7_2:70784518-70784537 | Msa1073330:intron | 25.0% |
!! | ATATATTTCGAGTCGATATT+TGG | - | chr7_2:70784658-70784677 | None:intergenic | 25.0% |
!! | AATTTGCTCTCTGAAAAAAT+TGG | - | chr7_2:70784706-70784725 | None:intergenic | 25.0% |
!!! | TTTTTTGATAAATTGCAAGC+AGG | + | chr7_2:70784800-70784819 | Msa1073330:intron | 25.0% |
! | AAAAAACCGTCAAAGTTATA+TGG | + | chr7_2:70784941-70784960 | Msa1073330:intron | 25.0% |
! | CTAAATCCATATAACTTTGA+CGG | - | chr7_2:70784950-70784969 | None:intergenic | 25.0% |
! | GATTCCATAAAATTATCAAG+AGG | - | chr7_2:70785042-70785061 | None:intergenic | 25.0% |
!!! | AGACATTGATTCATCATTTA+AGG | - | chr7_2:70785064-70785083 | None:intergenic | 25.0% |
! | TATTATGAGTCTAACATAAC+AGG | + | chr7_2:70785102-70785121 | Msa1073330:intron | 25.0% |
! | ATCTAAAAGATATGGTTAGT+TGG | + | chr7_2:70785141-70785160 | Msa1073330:intron | 25.0% |
! | TATAATAGGTACTATACTGA+AGG | - | chr7_2:70785352-70785371 | None:intergenic | 25.0% |
! | TTTGTGAGAATATTCTTTAG+AGG | - | chr7_2:70785574-70785593 | None:intergenic | 25.0% |
!!! | GTTTGTTATGCATTAATACA+CGG | + | chr7_2:70785652-70785671 | Msa1073330:three_prime_UTR | 25.0% |
!!! | ACATTTTGGAAATTGAAACA+TGG | - | chr7_2:70785720-70785739 | None:intergenic | 25.0% |
!! | GTAGTAATTTCAACACATTT+TGG | - | chr7_2:70785734-70785753 | None:intergenic | 25.0% |
GGAAGCCATATTATGAATTT+GGG | - | chr7_2:70780052-70780071 | None:intergenic | 30.0% | |
TGGAAGCCATATTATGAATT+TGG | - | chr7_2:70780053-70780072 | None:intergenic | 30.0% | |
AGCATATACTCTTTCATATG+GGG | + | chr7_2:70780407-70780426 | Msa1073330:five_prime_UTR | 30.0% | |
AGCATTCTGATCAACATAAA+AGG | - | chr7_2:70780464-70780483 | None:intergenic | 30.0% | |
GTGAAATAGAAATCCAAATC+TGG | - | chr7_2:70780493-70780512 | None:intergenic | 30.0% | |
AAGGGAAATAACTAACCAAT+TGG | - | chr7_2:70780588-70780607 | None:intergenic | 30.0% | |
AGGATACATGATATTTCCTA+TGG | + | chr7_2:70780739-70780758 | Msa1073330:CDS | 30.0% | |
CAATAGTATAAAAACTCCAC+TGG | - | chr7_2:70780827-70780846 | None:intergenic | 30.0% | |
! | CAGTGGAGTTTTTATACTAT+TGG | + | chr7_2:70780825-70780844 | Msa1073330:CDS | 30.0% |
AAAGAGTTCATACAAGTGAT+AGG | - | chr7_2:70780926-70780945 | None:intergenic | 30.0% | |
GATGTATGTGGTTCATATTA+TGG | + | chr7_2:70781051-70781070 | Msa1073330:intron | 30.0% | |
GTATGAGAGATACTTCAAAA+TGG | - | chr7_2:70781816-70781835 | None:intergenic | 30.0% | |
GTAACATTGTAAACTTACGA+TGG | - | chr7_2:70781842-70781861 | None:intergenic | 30.0% | |
CGTTGTGCAACTTATATTTA+AGG | - | chr7_2:70782086-70782105 | None:intergenic | 30.0% | |
!! | ATCACTCTACTTTTGATCAT+TGG | - | chr7_2:70782220-70782239 | None:intergenic | 30.0% |
AGACTCTGATTAATGTAGAA+AGG | - | chr7_2:70782270-70782289 | None:intergenic | 30.0% | |
TCCATTTATCAAATGCGTTT+AGG | + | chr7_2:70782497-70782516 | Msa1073330:CDS | 30.0% | |
GATACCATTTAGATGTTTGA+GGG | - | chr7_2:70782544-70782563 | None:intergenic | 30.0% | |
AGATACCATTTAGATGTTTG+AGG | - | chr7_2:70782545-70782564 | None:intergenic | 30.0% | |
AGCTTAGAGAACATTGTAAA+GGG | - | chr7_2:70782581-70782600 | None:intergenic | 30.0% | |
AAGCTTAGAGAACATTGTAA+AGG | - | chr7_2:70782582-70782601 | None:intergenic | 30.0% | |
TTGTAGCTTAAGATCATTGA+AGG | - | chr7_2:70782648-70782667 | None:intergenic | 30.0% | |
ATGATCTTAAGCTACAAAGT+TGG | + | chr7_2:70782651-70782670 | Msa1073330:CDS | 30.0% | |
TTACCAATGAAATACTCGTT+TGG | + | chr7_2:70782858-70782877 | Msa1073330:intron | 30.0% | |
AAACCAAACGAGTATTTCAT+TGG | - | chr7_2:70782864-70782883 | None:intergenic | 30.0% | |
GATTGAAGAAACAATTATGG+AGG | + | chr7_2:70782934-70782953 | Msa1073330:CDS | 30.0% | |
! | AAGTTTAGGACTTCTAAATC+AGG | + | chr7_2:70782982-70783001 | Msa1073330:CDS | 30.0% |
TATGAGTGTTAGTTCATACT+AGG | + | chr7_2:70783070-70783089 | Msa1073330:intron | 30.0% | |
GAGCAATCATCAAAATCTTA+TGG | + | chr7_2:70783363-70783382 | Msa1073330:intron | 30.0% | |
TCAGATCTTAGAATCAGAAT+AGG | + | chr7_2:70783533-70783552 | Msa1073330:intron | 30.0% | |
CAGATCTTAGAATCAGAATA+GGG | + | chr7_2:70783534-70783553 | Msa1073330:intron | 30.0% | |
AGCAATGAACTTATTTGCTT+AGG | + | chr7_2:70783584-70783603 | Msa1073330:intron | 30.0% | |
GCAATGAACTTATTTGCTTA+GGG | + | chr7_2:70783585-70783604 | Msa1073330:intron | 30.0% | |
CAATGAACTTATTTGCTTAG+GGG | + | chr7_2:70783586-70783605 | Msa1073330:intron | 30.0% | |
AATGAACTTATTTGCTTAGG+GGG | + | chr7_2:70783587-70783606 | Msa1073330:intron | 30.0% | |
TTTAGCACAAAAAAGGCAAT+CGG | + | chr7_2:70783664-70783683 | Msa1073330:intron | 30.0% | |
TTTAGGAATGTTGTTCAACA+CGG | - | chr7_2:70783922-70783941 | None:intergenic | 30.0% | |
! | ATTAATTAACCATTTGGGGT+TGG | + | chr7_2:70784321-70784340 | Msa1073330:intron | 30.0% |
! | TTAATTAACCATTTGGGGTT+GGG | + | chr7_2:70784322-70784341 | Msa1073330:intron | 30.0% |
!!! | TATTACACGTGATTTTTTGC+AGG | + | chr7_2:70784675-70784694 | Msa1073330:intron | 30.0% |
AGCTTATAGATCTTAGACAA+AGG | + | chr7_2:70784844-70784863 | Msa1073330:CDS | 30.0% | |
GCTTATAGATCTTAGACAAA+GGG | + | chr7_2:70784845-70784864 | Msa1073330:CDS | 30.0% | |
TAAAATTATCAAGAGGTGGA+TGG | - | chr7_2:70785035-70785054 | None:intergenic | 30.0% | |
!! | TCCACCTCTTGATAATTTTA+TGG | + | chr7_2:70785035-70785054 | Msa1073330:intron | 30.0% |
TCCATAAAATTATCAAGAGG+TGG | - | chr7_2:70785039-70785058 | None:intergenic | 30.0% | |
! | CAATCTTTTCGCATTTTCTT+TGG | - | chr7_2:70785240-70785259 | None:intergenic | 30.0% |
TGTGAATTCATGAATGTAGT+AGG | - | chr7_2:70785294-70785313 | None:intergenic | 30.0% | |
! | TGAGAATATTCTTTAGAGGT+TGG | - | chr7_2:70785570-70785589 | None:intergenic | 30.0% |
AATTAACCAAGTGTGACAAA+TGG | + | chr7_2:70785592-70785611 | Msa1073330:exon | 30.0% | |
ATTAACCAAGTGTGACAAAT+GGG | + | chr7_2:70785593-70785612 | Msa1073330:exon | 30.0% | |
! | AGAGGAAGTATATCGATAAT+GGG | - | chr7_2:70785621-70785640 | None:intergenic | 30.0% |
! | TAGAGGAAGTATATCGATAA+TGG | - | chr7_2:70785622-70785641 | None:intergenic | 30.0% |
AACAAACTTTGTCAAAGTAG+AGG | - | chr7_2:70785639-70785658 | None:intergenic | 30.0% | |
GAAATTGAAACATGGATACA+TGG | - | chr7_2:70785712-70785731 | None:intergenic | 30.0% | |
GGAACTCTTTATATAGTGCT+TGG | - | chr7_2:70780009-70780028 | None:intergenic | 35.0% | |
TCTTTGTCTTTGATGTGACT+TGG | + | chr7_2:70780335-70780354 | Msa1073330:five_prime_UTR | 35.0% | |
!! | TCTTTGATGTGACTTGGTTA+TGG | + | chr7_2:70780341-70780360 | Msa1073330:five_prime_UTR | 35.0% |
TATATGCTATGAGCAATCCA+CGG | - | chr7_2:70780395-70780414 | None:intergenic | 35.0% | |
!!! | TGCTTTTTCCTTTAGCAGTT+TGG | - | chr7_2:70780520-70780539 | None:intergenic | 35.0% |
!! | TATCGACTTGTTCGAATTCA+AGG | - | chr7_2:70780559-70780578 | None:intergenic | 35.0% |
AAGTCGATAGAGAAACCAAT+TGG | + | chr7_2:70780570-70780589 | Msa1073330:CDS | 35.0% | |
TTTGATTGTGTGACATTTGC+AGG | + | chr7_2:70780678-70780697 | Msa1073330:intron | 35.0% | |
TTGATTGTGTGACATTTGCA+GGG | + | chr7_2:70780679-70780698 | Msa1073330:intron | 35.0% | |
CATGGTAAATTAGAAGCCAT+AGG | - | chr7_2:70780758-70780777 | None:intergenic | 35.0% | |
CTATGGCTTCTAATTTACCA+TGG | + | chr7_2:70780756-70780775 | Msa1073330:CDS | 35.0% | |
TGTTTATAATTAGGGACGGA+GGG | - | chr7_2:70781001-70781020 | None:intergenic | 35.0% | |
TTGTTTATAATTAGGGACGG+AGG | - | chr7_2:70781002-70781021 | None:intergenic | 35.0% | |
AAGTAAGAGAGGAGTTTCTT+AGG | - | chr7_2:70781791-70781810 | None:intergenic | 35.0% | |
TCAAAATGGGAAAGTAAGAG+AGG | - | chr7_2:70781802-70781821 | None:intergenic | 35.0% | |
GCCTAAACGCATTTGATAAA+TGG | - | chr7_2:70782501-70782520 | None:intergenic | 35.0% | |
TGTTCTCTAAGCTTATGACT+TGG | + | chr7_2:70782588-70782607 | Msa1073330:CDS | 35.0% | |
! | AAGCTTATGACTTGGATTTG+TGG | + | chr7_2:70782596-70782615 | Msa1073330:CDS | 35.0% |
! | AGCTTATGACTTGGATTTGT+GGG | + | chr7_2:70782597-70782616 | Msa1073330:CDS | 35.0% |
!! | GGTGTTGCTTTCTAAAACAA+AGG | - | chr7_2:70782627-70782646 | None:intergenic | 35.0% |
AAAACATAGACATGCCAACT+AGG | - | chr7_2:70782760-70782779 | None:intergenic | 35.0% | |
ATTATGGAGGCTGAGTTAAA+TGG | + | chr7_2:70782947-70782966 | Msa1073330:CDS | 35.0% | |
! | GATCAGATACAATGTTGACT+TGG | - | chr7_2:70783239-70783258 | None:intergenic | 35.0% |
AGTCAACATTGTATCTGATC+AGG | + | chr7_2:70783239-70783258 | Msa1073330:intron | 35.0% | |
CTTAAAATTGCACACTTGGT+TGG | - | chr7_2:70783334-70783353 | None:intergenic | 35.0% | |
! | CAACCAAGTGTGCAATTTTA+AGG | + | chr7_2:70783332-70783351 | Msa1073330:intron | 35.0% |
ACACCTTAAAATTGCACACT+TGG | - | chr7_2:70783338-70783357 | None:intergenic | 35.0% | |
TCATCAAAATCTTATGGGCT+AGG | + | chr7_2:70783369-70783388 | Msa1073330:intron | 35.0% | |
!!! | TGAAATGTTTTAACGTGTGC+TGG | - | chr7_2:70783516-70783535 | None:intergenic | 35.0% |
ATCGGATTCCATCATTCAAA+TGG | - | chr7_2:70783640-70783659 | None:intergenic | 35.0% | |
!! | AGCACTTGATTTGTCTCTTT+AGG | - | chr7_2:70783939-70783958 | None:intergenic | 35.0% |
! | TCTGCATAAAGCATTAGCAA+TGG | - | chr7_2:70783994-70784013 | None:intergenic | 35.0% |
! | ATTTTGTTGACGCAATGCAT+AGG | - | chr7_2:70784077-70784096 | None:intergenic | 35.0% |
ACAAGCTGAGATTCAAACTT+TGG | - | chr7_2:70784385-70784404 | None:intergenic | 35.0% | |
GTCAGTAATAAGAAGGTTGA+TGG | - | chr7_2:70784422-70784441 | None:intergenic | 35.0% | |
TTTGATAAATTGCAAGCAGG+TGG | + | chr7_2:70784803-70784822 | Msa1073330:intron | 35.0% | |
TTCACCAATCAATACTCCAA+AGG | + | chr7_2:70784896-70784915 | Msa1073330:CDS | 35.0% | |
AAAGAAAATGGACCAACCTT+TGG | - | chr7_2:70784915-70784934 | None:intergenic | 35.0% | |
! | TATGGTTAGTTGGAGATGAA+TGG | + | chr7_2:70785151-70785170 | Msa1073330:CDS | 35.0% |
! | ATGGTTAGTTGGAGATGAAT+GGG | + | chr7_2:70785152-70785171 | Msa1073330:CDS | 35.0% |
ATGGGATGAATATGAGCAAA+TGG | + | chr7_2:70785170-70785189 | Msa1073330:CDS | 35.0% | |
GGTATGAACAATGATCCTTT+CGG | - | chr7_2:70785201-70785220 | None:intergenic | 35.0% | |
TTTGGAGGGAAATGAGAAAA+TGG | - | chr7_2:70785222-70785241 | None:intergenic | 35.0% | |
! | CTTTTCGCATTTTCTTTGGA+GGG | - | chr7_2:70785236-70785255 | None:intergenic | 35.0% |
! | TCTTTTCGCATTTTCTTTGG+AGG | - | chr7_2:70785237-70785256 | None:intergenic | 35.0% |
TAATCATTGCTGGTGTATAG+TGG | - | chr7_2:70785269-70785288 | None:intergenic | 35.0% | |
GGAATAATTCATGCCTTAGA+AGG | + | chr7_2:70785469-70785488 | Msa1073330:CDS | 35.0% | |
TAATTCATGCCTTAGAAGGA+TGG | + | chr7_2:70785473-70785492 | Msa1073330:CDS | 35.0% | |
ATGAACATTCCATCCTTCTA+AGG | - | chr7_2:70785485-70785504 | None:intergenic | 35.0% | |
CATAATATGGCTTCCAAACC+AGG | + | chr7_2:70780057-70780076 | Msa1073330:five_prime_UTR | 40.0% | |
ATATGCTATGAGCAATCCAC+GGG | - | chr7_2:70780394-70780413 | None:intergenic | 40.0% | |
ACTCTTTCATATGGGGTGAA+AGG | + | chr7_2:70780414-70780433 | Msa1073330:five_prime_UTR | 40.0% | |
CTCTTTCATATGGGGTGAAA+GGG | + | chr7_2:70780415-70780434 | Msa1073330:five_prime_UTR | 40.0% | |
GGAAATATAGCTTGGTACAC+TGG | - | chr7_2:70780443-70780462 | None:intergenic | 40.0% | |
GAATGCTACACAACCAGATT+TGG | + | chr7_2:70780477-70780496 | Msa1073330:CDS | 40.0% | |
TCACGTTACCAAACTGCTAA+AGG | + | chr7_2:70780509-70780528 | Msa1073330:CDS | 40.0% | |
TGGCTTCTAATTTACCATGG+TGG | + | chr7_2:70780759-70780778 | Msa1073330:CDS | 40.0% | |
CTTACAGCAATATTGCATGC+TGG | + | chr7_2:70780800-70780819 | Msa1073330:CDS | 40.0% | |
GCTCAGTGACAATTGAAGAA+TGG | - | chr7_2:70780904-70780923 | None:intergenic | 40.0% | |
TTGCATATAATTAGGGACGG+AGG | + | chr7_2:70781115-70781134 | Msa1073330:intron | 40.0% | |
TGCATATAATTAGGGACGGA+GGG | + | chr7_2:70781116-70781135 | Msa1073330:intron | 40.0% | |
ATGACAAATGCTCCGCAAAT+GGG | - | chr7_2:70781637-70781656 | None:intergenic | 40.0% | |
TATGACAAATGCTCCGCAAA+TGG | - | chr7_2:70781638-70781657 | None:intergenic | 40.0% | |
ACTCCATCACACCAAATTCA+GGG | + | chr7_2:70782331-70782350 | Msa1073330:CDS | 40.0% | |
TGAGTAGTTAGCCCTGAATT+TGG | - | chr7_2:70782345-70782364 | None:intergenic | 40.0% | |
! | AGCCTCATTGATTAGACCAA+AGG | + | chr7_2:70782430-70782449 | Msa1073330:CDS | 40.0% |
CTCCTTTGGTCTAATCAATG+AGG | - | chr7_2:70782435-70782454 | None:intergenic | 40.0% | |
TGTGTTAAATGCACCACATC+TGG | - | chr7_2:70782461-70782480 | None:intergenic | 40.0% | |
CCATTTAGATGTTTGAGGGT+TGG | - | chr7_2:70782540-70782559 | None:intergenic | 40.0% | |
CCAACCCTCAAACATCTAAA+TGG | + | chr7_2:70782537-70782556 | Msa1073330:CDS | 40.0% | |
GGAGCAAAGGTGATAAGTTT+AGG | + | chr7_2:70782968-70782987 | Msa1073330:CDS | 40.0% | |
AGTGTTAGTTCATACTAGGC+TGG | + | chr7_2:70783074-70783093 | Msa1073330:intron | 40.0% | |
!! | TGTTGACTTGGTGGTTTAGA+TGG | - | chr7_2:70783227-70783246 | None:intergenic | 40.0% |
!! | CAGATACAATGTTGACTTGG+TGG | - | chr7_2:70783236-70783255 | None:intergenic | 40.0% |
AAAAAACTAATAGGGCCCCA+AGG | - | chr7_2:70783400-70783419 | None:intergenic | 40.0% | |
!!! | AATGTTTTAACGTGTGCTGG+AGG | - | chr7_2:70783513-70783532 | None:intergenic | 40.0% |
ACAAATCAAGTGCTTCTTCG+AGG | + | chr7_2:70783945-70783964 | Msa1073330:CDS | 40.0% | |
TCTTCGAGGCAAGTTCAATA+AGG | + | chr7_2:70783959-70783978 | Msa1073330:CDS | 40.0% | |
!! | GGGATACAACGTTGATTTGA+CGG | - | chr7_2:70784465-70784484 | None:intergenic | 40.0% |
GCAGGTGGCTGTATTATATA+AGG | + | chr7_2:70784818-70784837 | Msa1073330:intron | 40.0% | |
CATCATGTCGAAAGAAAGCT+TGG | + | chr7_2:70784869-70784888 | Msa1073330:CDS | 40.0% | |
!! | CCAACCTTTGGAGTATTGAT+TGG | - | chr7_2:70784903-70784922 | None:intergenic | 40.0% |
CCAATCAATACTCCAAAGGT+TGG | + | chr7_2:70784900-70784919 | Msa1073330:intron | 40.0% | |
TGGATGGTGTGTTTAATGGT+GGG | - | chr7_2:70785019-70785038 | None:intergenic | 40.0% | |
GTAGTAGGAGTAATCATTGC+TGG | - | chr7_2:70785279-70785298 | None:intergenic | 40.0% | |
CATGAATTCACACTCTTGTG+AGG | + | chr7_2:70785302-70785321 | Msa1073330:CDS | 40.0% | |
CATGCACTCATTACTCTTCT+TGG | - | chr7_2:70785439-70785458 | None:intergenic | 40.0% | |
CAAGAAGAGTAATGAGTGCA+TGG | + | chr7_2:70785437-70785456 | Msa1073330:CDS | 40.0% | |
GGATGGAATGTTCATGAATG+TGG | + | chr7_2:70785490-70785509 | Msa1073330:CDS | 40.0% | |
ACTTGCTTCCCATACTTTCT+CGG | - | chr7_2:70785533-70785552 | None:intergenic | 40.0% | |
TGGGAAGCAAGTATTCTTCA+TGG | + | chr7_2:70785541-70785560 | Msa1073330:CDS | 40.0% | |
! | TTACCATGGTGGAGAACAGA+TGG | + | chr7_2:70780770-70780789 | Msa1073330:CDS | 45.0% |
AATATTGCATGCTGGACCAG+TGG | + | chr7_2:70780808-70780827 | Msa1073330:CDS | 45.0% | |
TCTTCTGTGGCTGCACTATA+TGG | + | chr7_2:70781707-70781726 | Msa1073330:CDS | 45.0% | |
CACTCCATCACACCAAATTC+AGG | + | chr7_2:70782330-70782349 | Msa1073330:CDS | 45.0% | |
!! | TAGCCCTGAATTTGGTGTGA+TGG | - | chr7_2:70782337-70782356 | None:intergenic | 45.0% |
GGCTTCATATGTAGCATCTG+TGG | - | chr7_2:70782414-70782433 | None:intergenic | 45.0% | |
TGTTTGAGGGTTGGAAGCTA+AGG | - | chr7_2:70782531-70782550 | None:intergenic | 45.0% | |
! | TGGCATGTCTATGTTTTCCC+TGG | + | chr7_2:70782763-70782782 | Msa1073330:intron | 45.0% |
AAGAGAAGGACATGCATCCA+GGG | - | chr7_2:70782783-70782802 | None:intergenic | 45.0% | |
GGCTGAGTTAAATGGAGCAA+AGG | + | chr7_2:70782955-70782974 | Msa1073330:CDS | 45.0% | |
!! | CAAAATCTTATGGGCTAGGC+TGG | + | chr7_2:70783373-70783392 | Msa1073330:intron | 45.0% |
AGGGCATGCGAGAAATTCAT+AGG | + | chr7_2:70783553-70783572 | Msa1073330:intron | 45.0% | |
GGGCATGCGAGAAATTCATA+GGG | + | chr7_2:70783554-70783573 | Msa1073330:intron | 45.0% | |
!! | CGTTGATTTGACGGCTAGAA+TGG | - | chr7_2:70784456-70784475 | None:intergenic | 45.0% |
GGATGGTGTGTTTAATGGTG+GGG | - | chr7_2:70785018-70785037 | None:intergenic | 45.0% | |
GTGGATGGTGTGTTTAATGG+TGG | - | chr7_2:70785020-70785039 | None:intergenic | 45.0% | |
GAGGTGGATGGTGTGTTTAA+TGG | - | chr7_2:70785023-70785042 | None:intergenic | 45.0% | |
TCATTGCTGGTGTATAGTGG+TGG | - | chr7_2:70785266-70785285 | None:intergenic | 45.0% | |
! | TGCTTAGCACCGAGAAAGTA+TGG | + | chr7_2:70785521-70785540 | Msa1073330:CDS | 45.0% |
! | GCTTAGCACCGAGAAAGTAT+GGG | + | chr7_2:70785522-70785541 | Msa1073330:CDS | 45.0% |
!! | ATTAAAAAAAAAAACTAATA+GGG | - | chr7_2:70783408-70783427 | None:intergenic | 5.0% |
!! | TATTAAAAAAAAAAACTAAT+AGG | - | chr7_2:70783409-70783428 | None:intergenic | 5.0% |
!!! | TTTTTTAAAATAAAAGAAAA+TGG | - | chr7_2:70784927-70784946 | None:intergenic | 5.0% |
!!! | ATTTTAATTTATGTTATAAT+AGG | - | chr7_2:70785366-70785385 | None:intergenic | 5.0% |
GTCTGTAAGGATGCCTGGTT+TGG | - | chr7_2:70780073-70780092 | None:intergenic | 50.0% | |
AACCAGGCATCCTTACAGAC+TGG | + | chr7_2:70780073-70780092 | Msa1073330:five_prime_UTR | 50.0% | |
GTTTCCAAGGCCAGTCTGTA+AGG | - | chr7_2:70780086-70780105 | None:intergenic | 50.0% | |
AGTTCGTGATTCTAAGCCCG+TGG | + | chr7_2:70780375-70780394 | Msa1073330:five_prime_UTR | 50.0% | |
ACACCATCTGTTCTCCACCA+TGG | - | chr7_2:70780776-70780795 | None:intergenic | 50.0% | |
! | ATGGTGGAGAACAGATGGTG+TGG | + | chr7_2:70780775-70780794 | Msa1073330:CDS | 50.0% |
AGCTGTGACACACCCATTTG+CGG | + | chr7_2:70781622-70781641 | Msa1073330:intron | 50.0% | |
ATTTGCTCCATGGCATCCAC+AGG | + | chr7_2:70782300-70782319 | Msa1073330:intron | 50.0% | |
AGTGAAACCTGTGGATGCCA+TGG | - | chr7_2:70782310-70782329 | None:intergenic | 50.0% | |
GATGGAGTGAGTGAAACCTG+TGG | - | chr7_2:70782319-70782338 | None:intergenic | 50.0% | |
ACCAAAGGAGTCACCAGATG+TGG | + | chr7_2:70782445-70782464 | Msa1073330:CDS | 50.0% | |
ACCACATCTGGTGACTCCTT+TGG | - | chr7_2:70782449-70782468 | None:intergenic | 50.0% | |
CGCAAAAGTGACGACCTAGT+TGG | + | chr7_2:70782743-70782762 | Msa1073330:intron | 50.0% | |
CAAGAGAAGGACATGCATCC+AGG | - | chr7_2:70782784-70782803 | None:intergenic | 50.0% | |
! | GTGTGCTGGAGGTTTTTACG+AGG | - | chr7_2:70783502-70783521 | None:intergenic | 50.0% |
CCATGAAACCCAACCCCAAA+TGG | - | chr7_2:70784333-70784352 | None:intergenic | 50.0% | |
! | CCATTTGGGGTTGGGTTTCA+TGG | + | chr7_2:70784330-70784349 | Msa1073330:intron | 50.0% |
!! | GAGCAAATGGAAGCACCGAA+AGG | + | chr7_2:70785183-70785202 | Msa1073330:CDS | 50.0% |
ATGAGTGCATGGCGTATTGC+TGG | + | chr7_2:70785448-70785467 | Msa1073330:CDS | 50.0% | |
GGGAACCCATTTGTCACACT+TGG | - | chr7_2:70785601-70785620 | None:intergenic | 50.0% | |
!! | GCATCCTTACAGACTGGCCT+TGG | + | chr7_2:70780079-70780098 | Msa1073330:five_prime_UTR | 55.0% |
!! | AGACTGGCCTTGGAAACCTC+TGG | + | chr7_2:70780089-70780108 | Msa1073330:five_prime_UTR | 55.0% |
!! | GACTGGCCTTGGAAACCTCT+GGG | + | chr7_2:70780090-70780109 | Msa1073330:five_prime_UTR | 55.0% |
!! | ACTGGCCTTGGAAACCTCTG+GGG | + | chr7_2:70780091-70780110 | Msa1073330:five_prime_UTR | 55.0% |
AAGCTCCCCAGAGGTTTCCA+AGG | - | chr7_2:70780099-70780118 | None:intergenic | 55.0% | |
! | GAAACCTCTGGGGAGCTTCA+AGG | + | chr7_2:70780101-70780120 | Msa1073330:five_prime_UTR | 55.0% |
AGAACCTTGAAGCTCCCCAG+AGG | - | chr7_2:70780108-70780127 | None:intergenic | 55.0% | |
!! | TTATGGGCTAGGCTGGACCT+TGG | + | chr7_2:70783380-70783399 | Msa1073330:intron | 55.0% |
!! | TATGGGCTAGGCTGGACCTT+GGG | + | chr7_2:70783381-70783400 | Msa1073330:intron | 55.0% |
TCAACACGGTTGCAGCAGCT+AGG | - | chr7_2:70783908-70783927 | None:intergenic | 55.0% | |
GGCCAGTCTGTAAGGATGCC+TGG | - | chr7_2:70780078-70780097 | None:intergenic | 60.0% | |
!! | ATGGGCTAGGCTGGACCTTG+GGG | + | chr7_2:70783382-70783401 | Msa1073330:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 70779999 | 70785828 | 70779999 | ID=Msa1073330;Name=Msa1073330 |
chr7_2 | mRNA | 70779999 | 70785828 | 70779999 | ID=Msa1073330-mRNA-1;Parent=Msa1073330;Name=Msa1073330-mRNA-1;_AED=0.13;_eAED=0.13;_QI=442|1|1|1|0.8|0.63|11|207|567 |
chr7_2 | exon | 70779999 | 70780206 | 70779999 | ID=Msa1073330-mRNA-1:exon:15962;Parent=Msa1073330-mRNA-1 |
chr7_2 | exon | 70780233 | 70780591 | 70780233 | ID=Msa1073330-mRNA-1:exon:15963;Parent=Msa1073330-mRNA-1 |
chr7_2 | exon | 70780700 | 70780932 | 70780700 | ID=Msa1073330-mRNA-1:exon:15964;Parent=Msa1073330-mRNA-1 |
chr7_2 | exon | 70781624 | 70781843 | 70781624 | ID=Msa1073330-mRNA-1:exon:15965;Parent=Msa1073330-mRNA-1 |
chr7_2 | exon | 70782322 | 70782697 | 70782322 | ID=Msa1073330-mRNA-1:exon:15966;Parent=Msa1073330-mRNA-1 |
chr7_2 | exon | 70782896 | 70783003 | 70782896 | ID=Msa1073330-mRNA-1:exon:15967;Parent=Msa1073330-mRNA-1 |
chr7_2 | exon | 70783825 | 70784025 | 70783825 | ID=Msa1073330-mRNA-1:exon:15968;Parent=Msa1073330-mRNA-1 |
chr7_2 | exon | 70784822 | 70784917 | 70784822 | ID=Msa1073330-mRNA-1:exon:15969;Parent=Msa1073330-mRNA-1 |
chr7_2 | exon | 70785150 | 70785323 | 70785150 | ID=Msa1073330-mRNA-1:exon:15970;Parent=Msa1073330-mRNA-1 |
chr7_2 | exon | 70785427 | 70785787 | 70785427 | ID=Msa1073330-mRNA-1:exon:15971;Parent=Msa1073330-mRNA-1 |
chr7_2 | exon | 70785812 | 70785828 | 70785812 | ID=Msa1073330-mRNA-1:exon:15972;Parent=Msa1073330-mRNA-1 |
chr7_2 | five_prime_UTR | 70779999 | 70780206 | 70779999 | ID=Msa1073330-mRNA-1:five_prime_utr;Parent=Msa1073330-mRNA-1 |
chr7_2 | five_prime_UTR | 70780233 | 70780466 | 70780233 | ID=Msa1073330-mRNA-1:five_prime_utr;Parent=Msa1073330-mRNA-1 |
chr7_2 | CDS | 70780467 | 70780591 | 70780467 | ID=Msa1073330-mRNA-1:cds;Parent=Msa1073330-mRNA-1 |
chr7_2 | CDS | 70780700 | 70780932 | 70780700 | ID=Msa1073330-mRNA-1:cds;Parent=Msa1073330-mRNA-1 |
chr7_2 | CDS | 70781624 | 70781843 | 70781624 | ID=Msa1073330-mRNA-1:cds;Parent=Msa1073330-mRNA-1 |
chr7_2 | CDS | 70782322 | 70782697 | 70782322 | ID=Msa1073330-mRNA-1:cds;Parent=Msa1073330-mRNA-1 |
chr7_2 | CDS | 70782896 | 70783003 | 70782896 | ID=Msa1073330-mRNA-1:cds;Parent=Msa1073330-mRNA-1 |
chr7_2 | CDS | 70783825 | 70784025 | 70783825 | ID=Msa1073330-mRNA-1:cds;Parent=Msa1073330-mRNA-1 |
chr7_2 | CDS | 70784822 | 70784917 | 70784822 | ID=Msa1073330-mRNA-1:cds;Parent=Msa1073330-mRNA-1 |
chr7_2 | CDS | 70785150 | 70785323 | 70785150 | ID=Msa1073330-mRNA-1:cds;Parent=Msa1073330-mRNA-1 |
chr7_2 | CDS | 70785427 | 70785597 | 70785427 | ID=Msa1073330-mRNA-1:cds;Parent=Msa1073330-mRNA-1 |
chr7_2 | three_prime_UTR | 70785598 | 70785787 | 70785598 | ID=Msa1073330-mRNA-1:three_prime_utr;Parent=Msa1073330-mRNA-1 |
chr7_2 | three_prime_UTR | 70785812 | 70785828 | 70785812 | ID=Msa1073330-mRNA-1:three_prime_utr;Parent=Msa1073330-mRNA-1 |
Gene Sequence |
Protein sequence |