Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033570 | XP_003625020.2 | 86.548 | 617 | 23 | 4 | 1 | 559 | 10 | 624 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033570 | sp|F4HVY0|CER1_ARATH | 51.452 | 620 | 234 | 6 | 1 | 553 | 1 | 620 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033570 | A0A396H383 | 86.548 | 617 | 23 | 4 | 1 | 559 | 10 | 624 | 0.0 | 1085 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0669840 | Msa1033570 | 0.814722 | 1.333187e-51 | -8.615850e-47 |
| Msa0688500 | Msa1033570 | 0.808993 | 2.356728e-50 | -8.615850e-47 |
| Msa0212150 | Msa1033570 | 0.803155 | 3.988720e-49 | -8.615850e-47 |
| Msa0451400 | Msa1033570 | 0.800165 | 1.638142e-48 | -8.615850e-47 |
| Msa1033570 | Msa1073330 | 0.842003 | 3.372011e-58 | -8.615850e-47 |
| Msa1033570 | Msa1105020 | 0.853228 | 2.744790e-61 | -8.615850e-47 |
| Msa1033570 | Msa1160420 | 0.904424 | 1.245675e-79 | -8.615850e-47 |
| Msa1033570 | Msa1169990 | 0.801268 | 9.756362e-49 | -8.615850e-47 |
| Msa1033570 | Msa1201110 | 0.804179 | 2.445850e-49 | -8.615850e-47 |
| Msa1033570 | Msa1233560 | 0.843069 | 1.757073e-58 | -8.615850e-47 |
| Msa1033570 | Msa1313970 | 0.811552 | 6.611522e-51 | -8.615850e-47 |
| Msa0298240 | Msa1033570 | 0.804445 | 2.153028e-49 | -8.615850e-47 |
| Msa0538220 | Msa1033570 | 0.800008 | 1.762994e-48 | -8.615850e-47 |
| Msa0591790 | Msa1033570 | 0.803054 | 4.186069e-49 | -8.615850e-47 |
| Msa0851020 | Msa1033570 | 0.806831 | 6.795594e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033570 | MtrunA17_Chr7g0256371 | 86.548 | 617 | 23 | 4 | 1 | 559 | 10 | 624 | 0.0 | 1085 |
| Msa1033570 | MtrunA17_Chr7g0256391 | 80.227 | 617 | 64 | 3 | 1 | 559 | 1 | 617 | 0.0 | 1006 |
| Msa1033570 | MtrunA17_Chr7g0256411 | 79.417 | 617 | 67 | 5 | 1 | 559 | 32 | 646 | 0.0 | 993 |
| Msa1033570 | MtrunA17_Chr4g0026761 | 73.529 | 612 | 104 | 3 | 1 | 554 | 1 | 612 | 0.0 | 918 |
| Msa1033570 | MtrunA17_Chr8g0337081 | 59.091 | 616 | 190 | 5 | 1 | 554 | 1 | 616 | 0.0 | 720 |
| Msa1033570 | MtrunA17_Chr8g0337101 | 55.357 | 616 | 212 | 6 | 1 | 553 | 37 | 652 | 0.0 | 702 |
| Msa1033570 | MtrunA17_Chr4g0026811 | 71.806 | 454 | 70 | 3 | 20 | 415 | 6 | 459 | 0.0 | 650 |
| Msa1033570 | MtrunA17_Chr4g0073231 | 28.846 | 624 | 366 | 9 | 8 | 555 | 5 | 626 | 8.95e-91 | 291 |
| Msa1033570 | MtrunA17_Chr4g0026821 | 72.527 | 91 | 25 | 0 | 413 | 503 | 3 | 93 | 8.45e-42 | 145 |
| Msa1033570 | MtrunA17_Chr2g0305431 | 26.736 | 288 | 144 | 5 | 8 | 228 | 5 | 292 | 7.44e-36 | 136 |
| Msa1033570 | MtrunA17_Chr2g0305451 | 32.110 | 218 | 140 | 3 | 346 | 555 | 2 | 219 | 2.48e-29 | 115 |
| Msa1033570 | MtrunA17_Chr4g0026831 | 86.364 | 44 | 6 | 0 | 511 | 554 | 1 | 44 | 1.65e-20 | 84.7 |
| Msa1033570 | MtrunA17_Chr2g0305441 | 29.412 | 119 | 82 | 1 | 233 | 349 | 43 | 161 | 6.97e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033570 | AT1G02205.2 | 51.452 | 620 | 234 | 6 | 1 | 553 | 1 | 620 | 0.0 | 655 |
| Msa1033570 | AT1G02205.3 | 51.200 | 625 | 233 | 6 | 1 | 553 | 1 | 625 | 0.0 | 652 |
| Msa1033570 | AT1G02205.4 | 50.416 | 601 | 231 | 6 | 20 | 553 | 21 | 621 | 0.0 | 618 |
| Msa1033570 | AT1G02190.1 | 50.160 | 624 | 238 | 10 | 1 | 553 | 1 | 622 | 0.0 | 608 |
| Msa1033570 | AT2G37700.3 | 50.000 | 616 | 244 | 7 | 1 | 553 | 1 | 615 | 0.0 | 601 |
| Msa1033570 | AT1G02190.2 | 49.840 | 624 | 236 | 11 | 1 | 553 | 1 | 618 | 0.0 | 600 |
| Msa1033570 | AT2G37700.1 | 49.675 | 616 | 237 | 8 | 1 | 553 | 1 | 606 | 0.0 | 592 |
| Msa1033570 | AT2G37700.4 | 49.914 | 579 | 263 | 7 | 1 | 553 | 1 | 578 | 0.0 | 563 |
| Msa1033570 | AT1G02205.1 | 52.506 | 419 | 181 | 4 | 153 | 553 | 38 | 456 | 1.94e-155 | 453 |
| Msa1033570 | AT2G37700.2 | 48.414 | 473 | 184 | 5 | 1 | 414 | 1 | 472 | 1.09e-151 | 444 |
| Msa1033570 | AT1G02205.5 | 52.198 | 364 | 166 | 3 | 198 | 553 | 18 | 381 | 7.74e-134 | 395 |
| Msa1033570 | AT5G57800.1 | 31.220 | 631 | 356 | 13 | 6 | 559 | 3 | 632 | 4.43e-89 | 287 |
Find 128 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATGTATGACTACATTTA+TGG | 0.163251 | 7_1:-68766457 | Msa1033570:CDS |
| TTCATCCCAAATCCATAATA+TGG | 0.226114 | 7_1:-68768347 | Msa1033570:exon |
| TGGAAGCCATATTATGGATT+TGG | 0.248876 | 7_1:+68768341 | None:intergenic |
| TGCTTAGCACTGAGAAAGTA+TGG | 0.261801 | 7_1:-68763174 | Msa1033570:CDS |
| GCCTAAACGTAATTGATAAA+TGG | 0.272397 | 7_1:+68766333 | None:intergenic |
| AAGTAAGAGAGGAGTTTCTT+AGG | 0.281109 | 7_1:+68766784 | None:intergenic |
| CATGCACTCATTACTCTTCT+TGG | 0.283707 | 7_1:+68763259 | None:intergenic |
| CTTGATTGAAGAAACAATTA+TGG | 0.293400 | 7_1:-68765894 | Msa1033570:CDS |
| GTAGTAATTTCAACACATTT+TGG | 0.294781 | 7_1:+68762964 | None:intergenic |
| TTTGGAGGGAAATGAGAAAA+TGG | 0.296760 | 7_1:+68763480 | None:intergenic |
| TAGAGGAAGTATATCGATAA+TGG | 0.303413 | 7_1:+68763076 | None:intergenic |
| CCAACCCTCAAACATCTAAA+TGG | 0.304289 | 7_1:-68766294 | Msa1033570:CDS |
| GAATGCTACACAACCAGATT+TGG | 0.313054 | 7_1:-68767947 | Msa1033570:CDS |
| ATGAACATTCCATCCTTCTA+AGG | 0.317589 | 7_1:+68763213 | None:intergenic |
| TCTTCAGTGGCTGCACTATA+TGG | 0.317805 | 7_1:-68766865 | Msa1033570:intron |
| GATGAAAATAATGTAGTATA+TGG | 0.326327 | 7_1:+68768364 | None:intergenic |
| GGAAGCCATATTATGGATTT+GGG | 0.333436 | 7_1:+68768342 | None:intergenic |
| AGCACTTGATTTGTCTCTTT+AGG | 0.336516 | 7_1:+68764739 | None:intergenic |
| TGCTTATGACTTGGATTTGT+GGG | 0.344010 | 7_1:-68766234 | Msa1033570:CDS |
| GGAGCAAAGGTGATAAGTTT+AGG | 0.355246 | 7_1:-68765857 | Msa1033570:CDS |
| TATCGACTTGTTCGAATTCA+AGG | 0.358353 | 7_1:+68767868 | None:intergenic |
| AGCATTCTGATCAACATAAA+AGG | 0.365500 | 7_1:+68767963 | None:intergenic |
| GCAGGTGGCTGTATTATATA+AGG | 0.367330 | 7_1:-68763882 | Msa1033570:intron |
| ACTGCATTACTATATTATAT+AGG | 0.367550 | 7_1:-68767694 | Msa1033570:CDS |
| TTTGTGAGAATATTCTTTAG+AGG | 0.382170 | 7_1:+68763124 | None:intergenic |
| GGAATAATTCATGCCTTAGA+AGG | 0.384364 | 7_1:-68763226 | Msa1033570:CDS |
| ATTATGGAGGCTGAGTTAAA+TGG | 0.386727 | 7_1:-68765878 | Msa1033570:CDS |
| TCTTCGAGGCAAGTTCAATA+AGG | 0.388690 | 7_1:-68764716 | Msa1033570:CDS |
| GAAACCTCTGGGGAGCTTCA+AGG | 0.397370 | 7_1:-68768290 | Msa1033570:intron |
| GTCTGTAAGGATGCCTGGTT+TGG | 0.397427 | 7_1:+68768321 | None:intergenic |
| CTCTTTCATATGGGGTGAAA+GGG | 0.398310 | 7_1:-68768009 | Msa1033570:CDS |
| TGAGAATATTCTTTAGAGGT+TGG | 0.401910 | 7_1:+68763128 | None:intergenic |
| CTGGTTTGGAAGCCATATTA+TGG | 0.406695 | 7_1:+68768335 | None:intergenic |
| GCATCCTTACAGACTGGCCT+TGG | 0.407256 | 7_1:-68768312 | Msa1033570:CDS |
| GGAACTCTTTATATAGTGCT+TGG | 0.410899 | 7_1:+68768385 | None:intergenic |
| ATAGCATATACTCTTTCATA+TGG | 0.411100 | 7_1:-68768019 | Msa1033570:CDS |
| AAAAGCAAGATTGTTGATAA+AGG | 0.411329 | 7_1:-68767891 | Msa1033570:CDS |
| TTGTAGCTTAAGATCATTGA+AGG | 0.414295 | 7_1:+68766186 | None:intergenic |
| TGTGAATTCATGAATGTAGT+AGG | 0.418846 | 7_1:+68763408 | None:intergenic |
| ACCACATCTGGTGACTCCTT+TGG | 0.419685 | 7_1:+68766385 | None:intergenic |
| GTATGAGAGATACTTCAAAA+TGG | 0.422668 | 7_1:+68766759 | None:intergenic |
| GTGAAATAGAAATCCAAATC+TGG | 0.423701 | 7_1:+68767934 | None:intergenic |
| TCTCCACCATGGTAAGTTAG+AGG | 0.426273 | 7_1:+68767651 | None:intergenic |
| ATGAGTGCATGGCGTATTGC+TGG | 0.430094 | 7_1:-68763247 | Msa1033570:CDS |
| AAGTTTAGGACTTCTAAATC+AGG | 0.430707 | 7_1:-68765843 | Msa1033570:intron |
| TTGAAGATAAAAGTTGTAGA+TGG | 0.435173 | 7_1:-68764799 | Msa1033570:CDS |
| TCACGTTACCAAACTGCTAA+AGG | 0.436168 | 7_1:-68767915 | Msa1033570:CDS |
| AATTAACCAAGTGTGACAAA+TGG | 0.438907 | 7_1:-68763103 | Msa1033570:exon |
| ATGATCTTAAGCTACAAAGT+TGG | 0.442074 | 7_1:-68766180 | Msa1033570:CDS |
| AGCATAGAGAACATTGTAAA+GGG | 0.447415 | 7_1:+68766253 | None:intergenic |
| AGAGGAAGTATATCGATAAT+GGG | 0.448082 | 7_1:+68763077 | None:intergenic |
| CATAATATGGCTTCCAAACC+AGG | 0.448414 | 7_1:-68768334 | Msa1033570:exon |
| GATACCATTTAGATGTTTGA+GGG | 0.449852 | 7_1:+68766290 | None:intergenic |
| TAGCATATACTCTTTCATAT+GGG | 0.452930 | 7_1:-68768018 | Msa1033570:CDS |
| TATGAGAGATACTTCAAAAT+GGG | 0.456294 | 7_1:+68766760 | None:intergenic |
| TATGGTTAGTTGGAGATGAA+TGG | 0.456856 | 7_1:-68763548 | Msa1033570:CDS |
| ATGCTTATGACTTGGATTTG+TGG | 0.457920 | 7_1:-68766235 | Msa1033570:CDS |
| GGAAATATAGCTTGGTACAC+TGG | 0.463338 | 7_1:+68767984 | None:intergenic |
| GTTTCCAAGGCCAGTCTGTA+AGG | 0.467818 | 7_1:+68768308 | None:intergenic |
| GTAGTAGGAGTAATCATTGC+TGG | 0.470094 | 7_1:+68763423 | None:intergenic |
| GGTGTTGCTTTCTAAAACAA+AGG | 0.470122 | 7_1:+68766207 | None:intergenic |
| GGCCAGTCTGTAAGGATGCC+TGG | 0.476832 | 7_1:+68768316 | None:intergenic |
| TCAACCTTTGGAGTATTGAT+TGG | 0.477115 | 7_1:+68763800 | None:intergenic |
| ATTAACCAAGTGTGACAAAT+GGG | 0.477221 | 7_1:-68763102 | Msa1033570:exon |
| TGTGTTAAGTGAACCACATC+TGG | 0.478807 | 7_1:+68766373 | None:intergenic |
| ATCTAAAAGATATGGTTAGT+TGG | 0.480880 | 7_1:-68763558 | Msa1033570:intron |
| AGATACCATTTAGATGTTTG+AGG | 0.483611 | 7_1:+68766289 | None:intergenic |
| AGACTGGCCTTGGAAACCTC+TGG | 0.487844 | 7_1:-68768302 | Msa1033570:CDS |
| GACTGGCCTTGGAAACCTCT+GGG | 0.488240 | 7_1:-68768301 | Msa1033570:CDS |
| ACTCTTTCATATGGGGTGAA+AGG | 0.491070 | 7_1:-68768010 | Msa1033570:CDS |
| CCATTTAGATGTTTGAGGGT+TGG | 0.492002 | 7_1:+68766294 | None:intergenic |
| ATGGGATGAATATGAGCAAA+TGG | 0.495092 | 7_1:-68763529 | Msa1033570:CDS |
| GGGAACCCATTTGTCACACT+TGG | 0.495754 | 7_1:+68763097 | None:intergenic |
| AGGATACATGATATTTCCTA+TGG | 0.497955 | 7_1:-68767674 | Msa1033570:CDS |
| AAGCATAGAGAACATTGTAA+AGG | 0.498475 | 7_1:+68766252 | None:intergenic |
| ATGGTTAGTTGGAGATGAAT+GGG | 0.501106 | 7_1:-68763547 | Msa1033570:CDS |
| TGTTCTCTATGCTTATGACT+TGG | 0.508587 | 7_1:-68766243 | Msa1033570:CDS |
| CATTGATTTCATGAACAACA+TGG | 0.515742 | 7_1:-68766830 | Msa1033570:CDS |
| GGTATGAACAATGATCCTTT+CGG | 0.516935 | 7_1:+68763501 | None:intergenic |
| TAATCATTGCTGGTGTATAG+TGG | 0.518061 | 7_1:+68763433 | None:intergenic |
| ACAAATCAAGTGCTTCTTCG+AGG | 0.524077 | 7_1:-68764730 | Msa1033570:CDS |
| GAAATTGAAACATGGATACA+TGG | 0.528938 | 7_1:+68762986 | None:intergenic |
| GCTTATAGATCTTAGACAAA+GGG | 0.537060 | 7_1:-68763855 | Msa1033570:CDS |
| AGCTTATAGATCTTAGACAA+AGG | 0.539004 | 7_1:-68763856 | Msa1033570:CDS |
| ACTGTGAACATTATATTCAA+AGG | 0.541828 | 7_1:-68764831 | Msa1033570:CDS |
| AAGTCGATAGAGAAACCAAT+TGG | 0.548372 | 7_1:-68767854 | Msa1033570:intron |
| CATCATGTCGAAAGAAAGCT+TGG | 0.558066 | 7_1:-68763831 | Msa1033570:CDS |
| CTATGGCCTCTAACTTACCA+TGG | 0.558995 | 7_1:-68767657 | Msa1033570:CDS |
| TAATTCATGCCTTAGAAGGA+TGG | 0.560259 | 7_1:-68763222 | Msa1033570:CDS |
| ACATAAAAGGAAATATAGCT+TGG | 0.563782 | 7_1:+68767976 | None:intergenic |
| CTCCTTTGGTCTAATCAATG+AGG | 0.565009 | 7_1:+68766399 | None:intergenic |
| CTTACAGCAATATTGCATGC+TGG | 0.570938 | 7_1:-68767613 | Msa1033570:CDS |
| GCTTAGCACTGAGAAAGTAT+GGG | 0.577653 | 7_1:-68763173 | Msa1033570:CDS |
| GGCTGAGTTAAATGGAGCAA+AGG | 0.578535 | 7_1:-68765870 | Msa1033570:CDS |
| TTCACCAATCAATACTCCAA+AGG | 0.582765 | 7_1:-68763804 | Msa1033570:intron |
| TCTGCATAAAGCATTAGCAA+TGG | 0.584639 | 7_1:+68764684 | None:intergenic |
| CCATAAATGTAGTCATACAT+TGG | 0.586111 | 7_1:+68766457 | None:intergenic |
| CATGAATTCACACTCTTGTG+AGG | 0.587054 | 7_1:-68763397 | Msa1033570:intron |
| GTTTGTTATGCATTAATACA+CGG | 0.587856 | 7_1:-68763043 | Msa1033570:three_prime_UTR |
| AAGCTCCCCAGAGGTTTCCA+AGG | 0.587944 | 7_1:+68768295 | None:intergenic |
| AACAAACTTTGTCAAAGTAG+AGG | 0.588982 | 7_1:+68763059 | None:intergenic |
| GGCTTCATATGTAGCATCTG+TGG | 0.589327 | 7_1:+68766420 | None:intergenic |
| AGCCTCATTGATTAGACCAA+AGG | 0.589348 | 7_1:-68766401 | Msa1033570:CDS |
| ACCAAAGGAGTCACCAGATG+TGG | 0.591604 | 7_1:-68766386 | Msa1033570:CDS |
| CAAGAAGAGTAATGAGTGCA+TGG | 0.592300 | 7_1:-68763258 | Msa1033570:CDS |
| ATTGATTTCATGAACAACAT+GGG | 0.593212 | 7_1:-68766829 | Msa1033570:CDS |
| AACCAGGCATCCTTACAGAC+TGG | 0.594883 | 7_1:-68768318 | Msa1033570:CDS |
| ATATGCTATGAGCAATCCAC+GGG | 0.601636 | 7_1:+68768033 | None:intergenic |
| AGCATATACTCTTTCATATG+GGG | 0.606631 | 7_1:-68768017 | Msa1033570:CDS |
| GGATGGAATGTTCATGAATG+TGG | 0.610974 | 7_1:-68763205 | Msa1033570:CDS |
| AGTTCGTGATTCTAAGCCCG+TGG | 0.612195 | 7_1:-68768049 | Msa1033570:CDS |
| TTTAGGAATGTTGTTCAACA+CGG | 0.612745 | 7_1:+68764756 | None:intergenic |
| AATGGTATCTACATTTAATG+TGG | 0.614475 | 7_1:-68766276 | Msa1033570:CDS |
| TCAAAATGGGAAAGTAAGAG+AGG | 0.615999 | 7_1:+68766773 | None:intergenic |
| TTACCATGGTGGAGAACAGA+TGG | 0.618214 | 7_1:-68767643 | Msa1033570:CDS |
| TCAACACGGTTGCAGCAGCT+AGG | 0.626529 | 7_1:+68764770 | None:intergenic |
| GATTGAAGAAACAATTATGG+AGG | 0.627286 | 7_1:-68765891 | Msa1033570:CDS |
| TGGGAAGCAAGTATTCGTCA+TGG | 0.629295 | 7_1:-68763154 | Msa1033570:CDS |
| CATGGTAAGTTAGAGGCCAT+AGG | 0.634259 | 7_1:+68767658 | None:intergenic |
| TATATGCTATGAGCAATCCA+CGG | 0.638673 | 7_1:+68768032 | None:intergenic |
| AATATTGCATGCTGGACCAG+TGG | 0.640771 | 7_1:-68767605 | Msa1033570:CDS |
| GAGCAAATGGAAGCACCGAA+AGG | 0.641337 | 7_1:-68763516 | Msa1033570:CDS |
| TATACCAAGATTTAAAACAC+AGG | 0.658845 | 7_1:-68766155 | Msa1033570:intron |
| ACACCATCTGTTCTCCACCA+TGG | 0.679185 | 7_1:+68767640 | None:intergenic |
| ACTGGCCTTGGAAACCTCTG+GGG | 0.699980 | 7_1:-68768300 | Msa1033570:CDS |
| TGGCCTCTAACTTACCATGG+TGG | 0.709799 | 7_1:-68767654 | Msa1033570:CDS |
| AGAACCTTGAAGCTCCCCAG+AGG | 0.725693 | 7_1:+68768286 | None:intergenic |
| ATGGTGGAGAACAGATGGTG+TGG | 0.733193 | 7_1:-68767638 | Msa1033570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTTATGTATATATATAT+TGG | - | chr7_1:68763841-68763860 | Msa1033570:CDS | 10.0% |
| !! | TATTTACTAAATTAATAGAA+GGG | + | chr7_1:68765484-68765503 | None:intergenic | 10.0% |
| !! | ATATTTACTAAATTAATAGA+AGG | + | chr7_1:68765485-68765504 | None:intergenic | 10.0% |
| !!! | TTTTTCTATTGTTTTTTTAA+AGG | - | chr7_1:68765569-68765588 | Msa1033570:intron | 10.0% |
| !!! | TTTTCTATTGTTTTTTTAAA+GGG | - | chr7_1:68765570-68765589 | Msa1033570:intron | 10.0% |
| !!! | AACTTTTATATATATCTTTA+TGG | - | chr7_1:68766365-68766384 | Msa1033570:CDS | 10.0% |
| !! | AAATTAATTAATTAACCATT+TGG | - | chr7_1:68766930-68766949 | Msa1033570:intron | 10.0% |
| !! | AATTAATTAATTAACCATTT+GGG | - | chr7_1:68766931-68766950 | Msa1033570:intron | 10.0% |
| !!! | AAACATACAATTTTTTTTTA+AGG | - | chr7_1:68767171-68767190 | Msa1033570:intron | 10.0% |
| !! | TTAAAGGGAAATAAAATATT+TGG | + | chr7_1:68763466-68763485 | None:intergenic | 15.0% |
| !! | GATAAAGAGAAATATTTAAA+GGG | + | chr7_1:68763481-68763500 | None:intergenic | 15.0% |
| !! | AGATAAAGAGAAATATTTAA+AGG | + | chr7_1:68763482-68763501 | None:intergenic | 15.0% |
| !!! | AAAAATGTTGTTTATAAATG+TGG | - | chr7_1:68763899-68763918 | Msa1033570:intron | 15.0% |
| !! | TAGGTTTAGTAAATTAAATA+AGG | - | chr7_1:68763927-68763946 | Msa1033570:intron | 15.0% |
| !!! | ATGTATTTTTTAATGTCTAA+AGG | + | chr7_1:68764012-68764031 | None:intergenic | 15.0% |
| !! | TTGTATACTTAAACATAATT+TGG | + | chr7_1:68764053-68764072 | None:intergenic | 15.0% |
| !! | ATTTACTAAATTAATAGAAG+GGG | + | chr7_1:68765483-68765502 | None:intergenic | 15.0% |
| !! | ATATAAAGTGAAATATATAG+TGG | + | chr7_1:68766747-68766766 | None:intergenic | 15.0% |
| !! | TAAATAAACATTAGTTACTA+CGG | - | chr7_1:68766785-68766804 | Msa1033570:CDS | 15.0% |
| !! | ATTAATTAATTAACCATTTG+GGG | - | chr7_1:68766932-68766951 | Msa1033570:intron | 15.0% |
| !! | TTAAAAAGTTAGTAATAAGA+AGG | + | chr7_1:68767044-68767063 | None:intergenic | 15.0% |
| !! | CATTAAATATGAATACTTAA+GGG | + | chr7_1:68767100-68767119 | None:intergenic | 15.0% |
| !! | ATTTATATATGTAACAGAAT+TGG | - | chr7_1:68768003-68768022 | Msa1033570:CDS | 15.0% |
| !!! | AATTTTTAGATTAGAAACTA+GGG | + | chr7_1:68768281-68768300 | None:intergenic | 15.0% |
| !!! | AAATTTTTAGATTAGAAACT+AGG | + | chr7_1:68768282-68768301 | None:intergenic | 15.0% |
| !!! | GTTAATTTTATTTTGTAAGA+AGG | - | chr7_1:68768359-68768378 | Msa1033570:five_prime_UTR | 15.0% |
| !! | GATGAAAATAATGTAGTATA+TGG | + | chr7_1:68762927-68762946 | None:intergenic | 20.0% |
| !! | ACTGCATTACTATATTATAT+AGG | - | chr7_1:68763594-68763613 | Msa1033570:intron | 20.0% |
| !! | ATACTTAAACATAATTTGGA+TGG | + | chr7_1:68764049-68764068 | None:intergenic | 20.0% |
| !! | GTATATTTGATCATAAATTG+TGG | + | chr7_1:68764113-68764132 | None:intergenic | 20.0% |
| !! | AAATTAATTGAGACCAAATT+TGG | + | chr7_1:68764286-68764305 | None:intergenic | 20.0% |
| !! | AAATTTGGTCTCAATTAATT+TGG | - | chr7_1:68764285-68764304 | Msa1033570:intron | 20.0% |
| !! | AAAAAATTGTAAACTTACGA+TGG | + | chr7_1:68764558-68764577 | None:intergenic | 20.0% |
| !! | TAAGTTTACAATGTTACTAT+TGG | - | chr7_1:68764590-68764609 | Msa1033570:intron | 20.0% |
| !! | TTTGAGAAATACTACAAAAT+AGG | + | chr7_1:68765350-68765369 | None:intergenic | 20.0% |
| !!! | ATTTTGTAGTATTTCTCAAA+AGG | - | chr7_1:68765350-68765369 | Msa1033570:intron | 20.0% |
| !!! | TTTTGTAGTATTTCTCAAAA+GGG | - | chr7_1:68765351-68765370 | Msa1033570:intron | 20.0% |
| !! | TCATGATTATATAATCTGAA+CGG | - | chr7_1:68765938-68765957 | Msa1033570:intron | 20.0% |
| !!! | TTTTTTGTGCTAAAATCTAT+CGG | + | chr7_1:68766315-68766334 | None:intergenic | 20.0% |
| !!! | TTTGATTTGAATAACATTGA+TGG | - | chr7_1:68766409-68766428 | Msa1033570:CDS | 20.0% |
| !!! | TTGATTTGAATAACATTGAT+GGG | - | chr7_1:68766410-68766429 | Msa1033570:CDS | 20.0% |
| !! | GCATTAAATATGAATACTTA+AGG | + | chr7_1:68767101-68767120 | None:intergenic | 20.0% |
| !! | ACAAATTAATTATGAGTGAT+TGG | - | chr7_1:68767202-68767221 | Msa1033570:intron | 20.0% |
| !! | TTTATCTCATCTAAAAGATA+TGG | - | chr7_1:68767722-68767741 | Msa1033570:intron | 20.0% |
| ! | ATAGCATATACTCTTTCATA+TGG | - | chr7_1:68763269-68763288 | Msa1033570:CDS | 25.0% |
| ! | TAGCATATACTCTTTCATAT+GGG | - | chr7_1:68763270-68763289 | Msa1033570:CDS | 25.0% |
| ! | ACATAAAAGGAAATATAGCT+TGG | + | chr7_1:68763315-68763334 | None:intergenic | 25.0% |
| !! | AAAAGCAAGATTGTTGATAA+AGG | - | chr7_1:68763397-68763416 | Msa1033570:intron | 25.0% |
| !! | AATATTTGGAACTAACCAAT+TGG | + | chr7_1:68763452-68763471 | None:intergenic | 25.0% |
| ! | GTTTATAAATGTGGTTAACT+AGG | - | chr7_1:68763908-68763927 | Msa1033570:intron | 25.0% |
| ! | GTAAATCACATTCAAAATTG+TGG | + | chr7_1:68763990-68764009 | None:intergenic | 25.0% |
| !!! | GATTAATTGTGTTATTTGCA+TGG | - | chr7_1:68764166-68764185 | Msa1033570:intron | 25.0% |
| ! | TGTAAAATATGACAAATGCT+CGG | + | chr7_1:68764361-68764380 | None:intergenic | 25.0% |
| !! | ATTGATTTCATGAACAACAT+GGG | - | chr7_1:68764459-68764478 | Msa1033570:intron | 25.0% |
| ! | TATGAGAGATACTTCAAAAT+GGG | + | chr7_1:68764531-68764550 | None:intergenic | 25.0% |
| ! | TCCATTTATCAATTACGTTT+AGG | - | chr7_1:68764954-68764973 | Msa1033570:intron | 25.0% |
| ! | AATGGTATCTACATTTAATG+TGG | - | chr7_1:68765012-68765031 | Msa1033570:intron | 25.0% |
| !! | TATACCAAGATTTAAAACAC+AGG | - | chr7_1:68765133-68765152 | Msa1033570:intron | 25.0% |
| !!! | AATACCTGTGTTTTAAATCT+TGG | + | chr7_1:68765140-68765159 | None:intergenic | 25.0% |
| !! | ATCTAAAATCACAAATGAGA+AGG | + | chr7_1:68765171-68765190 | None:intergenic | 25.0% |
| !!! | TTTTTAACTGAATCAAGAGA+AGG | + | chr7_1:68765253-68765272 | None:intergenic | 25.0% |
| ! | TAAAAAATTTGCATTCTCTG+TGG | - | chr7_1:68765277-68765296 | Msa1033570:intron | 25.0% |
| ! | CTTGATTGAAGAAACAATTA+TGG | - | chr7_1:68765394-68765413 | Msa1033570:intron | 25.0% |
| ! | AGGGAAAATATTAGTATTGT+TGG | - | chr7_1:68765589-68765608 | Msa1033570:intron | 25.0% |
| ! | ATTCGGAAGTTATAATTGAT+TGG | + | chr7_1:68765762-68765781 | None:intergenic | 25.0% |
| ! | TGGTTGGAAATAAAATCATT+CGG | + | chr7_1:68765779-68765798 | None:intergenic | 25.0% |
| ! | AGTAATCATCAAAATCTCAT+GGG | - | chr7_1:68765825-68765844 | Msa1033570:intron | 25.0% |
| !! | AGTAATGATCTTATTTGCTT+AGG | - | chr7_1:68766054-68766073 | Msa1033570:intron | 25.0% |
| !! | GTAATGATCTTATTTGCTTA+GGG | - | chr7_1:68766055-68766074 | Msa1033570:intron | 25.0% |
| !! | TAATGATCTTATTTGCTTAG+GGG | - | chr7_1:68766056-68766075 | Msa1033570:intron | 25.0% |
| !!! | ATTCAAATGGCTTTTTTTTC+GGG | + | chr7_1:68766097-68766116 | None:intergenic | 25.0% |
| !!! | CATTCAAATGGCTTTTTTTT+CGG | + | chr7_1:68766098-68766117 | None:intergenic | 25.0% |
| ! | AAAAAAAGCCATTTGAATGA+TGG | - | chr7_1:68766099-68766118 | Msa1033570:intron | 25.0% |
| !!! | GATAGATTTTAGCACAAAAA+AGG | - | chr7_1:68766314-68766333 | Msa1033570:CDS | 25.0% |
| ! | TGGAATTCGAAGTAAAATAA+TGG | - | chr7_1:68766385-68766404 | Msa1033570:CDS | 25.0% |
| ! | ACTGTGAACATTATATTCAA+AGG | - | chr7_1:68766457-68766476 | Msa1033570:CDS | 25.0% |
| !! | CAACTTTTATCTTCAATTGT+GGG | + | chr7_1:68766485-68766504 | None:intergenic | 25.0% |
| !! | ACAACTTTTATCTTCAATTG+TGG | + | chr7_1:68766486-68766505 | None:intergenic | 25.0% |
| ! | TTGAAGATAAAAGTTGTAGA+TGG | - | chr7_1:68766489-68766508 | Msa1033570:intron | 25.0% |
| ! | TTTATGCAGAAAAAATGTAC+AGG | - | chr7_1:68766617-68766636 | Msa1033570:intron | 25.0% |
| ! | ACTTTGTCTCATAATAAATG+TGG | + | chr7_1:68766875-68766894 | None:intergenic | 25.0% |
| ! | AATATGATTAACTCAAGTAG+AGG | - | chr7_1:68767133-68767152 | Msa1033570:intron | 25.0% |
| !! | ATATATTTCGAGTCGATATT+TGG | + | chr7_1:68767273-68767292 | None:intergenic | 25.0% |
| !! | AATTTGCTCTCTGAAAAAAT+TGG | + | chr7_1:68767321-68767340 | None:intergenic | 25.0% |
| !!! | TTTTTTGATAAATTGCAAGC+AGG | - | chr7_1:68767388-68767407 | Msa1033570:intron | 25.0% |
| !! | TAAAAACGGTCAAAGTTTTA+TGG | - | chr7_1:68767529-68767548 | Msa1033570:intron | 25.0% |
| ! | GATTCCATAAAATTATCAAG+AGG | + | chr7_1:68767630-68767649 | None:intergenic | 25.0% |
| !!! | AGACATTGATTCATCATTTA+AGG | + | chr7_1:68767652-68767671 | None:intergenic | 25.0% |
| ! | TATTATGAGTCTAACATAAC+AGG | - | chr7_1:68767690-68767709 | Msa1033570:CDS | 25.0% |
| ! | ATCTAAAAGATATGGTTAGT+TGG | - | chr7_1:68767730-68767749 | Msa1033570:intron | 25.0% |
| ! | TATAATAGGTACTATACTGA+AGG | + | chr7_1:68767941-68767960 | None:intergenic | 25.0% |
| ! | TTTGTGAGAATATTCTTTAG+AGG | + | chr7_1:68768167-68768186 | None:intergenic | 25.0% |
| !!! | GTTTGTTATGCATTAATACA+CGG | - | chr7_1:68768245-68768264 | Msa1033570:intron | 25.0% |
| !!! | ACATTTTGGAAATTGAAACA+TGG | + | chr7_1:68768313-68768332 | None:intergenic | 25.0% |
| !! | GTAGTAATTTCAACACATTT+TGG | + | chr7_1:68768327-68768346 | None:intergenic | 25.0% |
| TTCATCCCAAATCCATAATA+TGG | - | chr7_1:68762941-68762960 | Msa1033570:three_prime_UTR | 30.0% | |
| AGCATATACTCTTTCATATG+GGG | - | chr7_1:68763271-68763290 | Msa1033570:CDS | 30.0% | |
| AGCATTCTGATCAACATAAA+AGG | + | chr7_1:68763328-68763347 | None:intergenic | 30.0% | |
| GTGAAATAGAAATCCAAATC+TGG | + | chr7_1:68763357-68763376 | None:intergenic | 30.0% | |
| AGGATACATGATATTTCCTA+TGG | - | chr7_1:68763614-68763633 | Msa1033570:intron | 30.0% | |
| CAATAGTATAAAAACTCCAC+TGG | + | chr7_1:68763702-68763721 | None:intergenic | 30.0% | |
| ! | CAGTGGAGTTTTTATACTAT+TGG | - | chr7_1:68763700-68763719 | Msa1033570:intron | 30.0% |
| AAAGAGTTCATACAAGTGAT+AGG | + | chr7_1:68763801-68763820 | None:intergenic | 30.0% | |
| CATATACTCTTGTCCAAATT+TGG | - | chr7_1:68764270-68764289 | Msa1033570:intron | 30.0% | |
| !! | CATTGATTTCATGAACAACA+TGG | - | chr7_1:68764458-68764477 | Msa1033570:intron | 30.0% |
| GTATGAGAGATACTTCAAAA+TGG | + | chr7_1:68764532-68764551 | None:intergenic | 30.0% | |
| GGAGCAAATAAATTAGCATA+TGG | + | chr7_1:68764746-68764765 | None:intergenic | 30.0% | |
| ATGCTAATTTATTTGCTCCT+TGG | - | chr7_1:68764747-68764766 | Msa1033570:CDS | 30.0% | |
| CCATAAATGTAGTCATACAT+TGG | + | chr7_1:68764834-68764853 | None:intergenic | 30.0% | |
| CCAATGTATGACTACATTTA+TGG | - | chr7_1:68764831-68764850 | Msa1033570:CDS | 30.0% | |
| GCCTAAACGTAATTGATAAA+TGG | + | chr7_1:68764958-68764977 | None:intergenic | 30.0% | |
| GATACCATTTAGATGTTTGA+GGG | + | chr7_1:68765001-68765020 | None:intergenic | 30.0% | |
| AGATACCATTTAGATGTTTG+AGG | + | chr7_1:68765002-68765021 | None:intergenic | 30.0% | |
| AGCATAGAGAACATTGTAAA+GGG | + | chr7_1:68765038-68765057 | None:intergenic | 30.0% | |
| AAGCATAGAGAACATTGTAA+AGG | + | chr7_1:68765039-68765058 | None:intergenic | 30.0% | |
| TTGTAGCTTAAGATCATTGA+AGG | + | chr7_1:68765105-68765124 | None:intergenic | 30.0% | |
| ATGATCTTAAGCTACAAAGT+TGG | - | chr7_1:68765108-68765127 | Msa1033570:intron | 30.0% | |
| TTACCAATGAAATACTCGTT+TGG | - | chr7_1:68765321-68765340 | Msa1033570:intron | 30.0% | |
| AAACCAAACGAGTATTTCAT+TGG | + | chr7_1:68765327-68765346 | None:intergenic | 30.0% | |
| GATTGAAGAAACAATTATGG+AGG | - | chr7_1:68765397-68765416 | Msa1033570:intron | 30.0% | |
| ! | AAGTTTAGGACTTCTAAATC+AGG | - | chr7_1:68765445-68765464 | Msa1033570:intron | 30.0% |
| TATGAGTGTTAGTTCATACT+AGG | - | chr7_1:68765533-68765552 | Msa1033570:intron | 30.0% | |
| GAGTAATCATCAAAATCTCA+TGG | - | chr7_1:68765824-68765843 | Msa1033570:intron | 30.0% | |
| !!! | TGAAATGTTTTAACGTGTGT+TGG | + | chr7_1:68765986-68766005 | None:intergenic | 30.0% |
| TCAGATCTTAGAATCAGAAT+AGG | - | chr7_1:68766003-68766022 | Msa1033570:intron | 30.0% | |
| CAGATCTTAGAATCAGAATA+GGG | - | chr7_1:68766004-68766023 | Msa1033570:intron | 30.0% | |
| ! | AATGATCTTATTTGCTTAGG+GGG | - | chr7_1:68766057-68766076 | Msa1033570:intron | 30.0% |
| TAAAATCTATCGGATTCCAT+CGG | + | chr7_1:68766305-68766324 | None:intergenic | 30.0% | |
| TTTAGCACAAAAAAGGCAAT+CGG | - | chr7_1:68766321-68766340 | Msa1033570:intron | 30.0% | |
| AAAAAGGCAATCGGATAAAT+AGG | - | chr7_1:68766330-68766349 | Msa1033570:intron | 30.0% | |
| TTTAGGAATGTTGTTCAACA+CGG | + | chr7_1:68766535-68766554 | None:intergenic | 30.0% | |
| ! | ATTAATTAACCATTTGGGGT+TGG | - | chr7_1:68766936-68766955 | Msa1033570:intron | 30.0% |
| ! | TTAATTAACCATTTGGGGTT+GGG | - | chr7_1:68766937-68766956 | Msa1033570:intron | 30.0% |
| GTTAGTAATAAGAAGGTTGA+TGG | + | chr7_1:68767037-68767056 | None:intergenic | 30.0% | |
| TAATCATATTGAAGCATGTC+AGG | + | chr7_1:68767123-68767142 | None:intergenic | 30.0% | |
| !!! | TATTACACGTGATTTTTTGC+AGG | - | chr7_1:68767290-68767309 | Msa1033570:intron | 30.0% |
| AGCTTATAGATCTTAGACAA+AGG | - | chr7_1:68767432-68767451 | Msa1033570:intron | 30.0% | |
| GCTTATAGATCTTAGACAAA+GGG | - | chr7_1:68767433-68767452 | Msa1033570:intron | 30.0% | |
| AAAGAAAATGGATCAACCTT+TGG | + | chr7_1:68767503-68767522 | None:intergenic | 30.0% | |
| TAAAATTATCAAGAGGTGGA+TGG | + | chr7_1:68767623-68767642 | None:intergenic | 30.0% | |
| !! | TCCACCTCTTGATAATTTTA+TGG | - | chr7_1:68767623-68767642 | Msa1033570:CDS | 30.0% |
| TCCATAAAATTATCAAGAGG+TGG | + | chr7_1:68767627-68767646 | None:intergenic | 30.0% | |
| ! | CAATCTTTTCGCATTTTCTT+TGG | + | chr7_1:68767829-68767848 | None:intergenic | 30.0% |
| ! | TGAGAATATTCTTTAGAGGT+TGG | + | chr7_1:68768163-68768182 | None:intergenic | 30.0% |
| AATTAACCAAGTGTGACAAA+TGG | - | chr7_1:68768185-68768204 | Msa1033570:intron | 30.0% | |
| ATTAACCAAGTGTGACAAAT+GGG | - | chr7_1:68768186-68768205 | Msa1033570:intron | 30.0% | |
| ! | AGAGGAAGTATATCGATAAT+GGG | + | chr7_1:68768214-68768233 | None:intergenic | 30.0% |
| ! | TAGAGGAAGTATATCGATAA+TGG | + | chr7_1:68768215-68768234 | None:intergenic | 30.0% |
| AACAAACTTTGTCAAAGTAG+AGG | + | chr7_1:68768232-68768251 | None:intergenic | 30.0% | |
| GAAATTGAAACATGGATACA+TGG | + | chr7_1:68768305-68768324 | None:intergenic | 30.0% | |
| GGAACTCTTTATATAGTGCT+TGG | + | chr7_1:68762906-68762925 | None:intergenic | 35.0% | |
| GGAAGCCATATTATGGATTT+GGG | + | chr7_1:68762949-68762968 | None:intergenic | 35.0% | |
| TGGAAGCCATATTATGGATT+TGG | + | chr7_1:68762950-68762969 | None:intergenic | 35.0% | |
| TCTTTGTCTTTGATGTGACT+TGG | - | chr7_1:68763199-68763218 | Msa1033570:CDS | 35.0% | |
| !! | TCTTTGATGTGACTTGGTTA+TGG | - | chr7_1:68763205-68763224 | Msa1033570:CDS | 35.0% |
| TATATGCTATGAGCAATCCA+CGG | + | chr7_1:68763259-68763278 | None:intergenic | 35.0% | |
| !!! | TGCTTTTTCCTTTAGCAGTT+TGG | + | chr7_1:68763384-68763403 | None:intergenic | 35.0% |
| !! | TATCGACTTGTTCGAATTCA+AGG | + | chr7_1:68763423-68763442 | None:intergenic | 35.0% |
| AAGTCGATAGAGAAACCAAT+TGG | - | chr7_1:68763434-68763453 | Msa1033570:CDS | 35.0% | |
| TTTGATTGTGTGACATTTGC+AGG | - | chr7_1:68763553-68763572 | Msa1033570:intron | 35.0% | |
| TTGATTGTGTGACATTTGCA+GGG | - | chr7_1:68763554-68763573 | Msa1033570:intron | 35.0% | |
| ACGAACAATGTTGTCAACAT+TGG | + | chr7_1:68764396-68764415 | None:intergenic | 35.0% | |
| GTTCGTCAAAAAATCTTCAG+TGG | - | chr7_1:68764410-68764429 | Msa1033570:intron | 35.0% | |
| AAGTAAGAGAGGAGTTTCTT+AGG | + | chr7_1:68764507-68764526 | None:intergenic | 35.0% | |
| TCAAAATGGGAAAGTAAGAG+AGG | + | chr7_1:68764518-68764537 | None:intergenic | 35.0% | |
| TGAGTAATTAGCCCTGAATT+TGG | + | chr7_1:68764802-68764821 | None:intergenic | 35.0% | |
| TGTTCTCTATGCTTATGACT+TGG | - | chr7_1:68765045-68765064 | Msa1033570:intron | 35.0% | |
| ! | ATGCTTATGACTTGGATTTG+TGG | - | chr7_1:68765053-68765072 | Msa1033570:intron | 35.0% |
| ! | TGCTTATGACTTGGATTTGT+GGG | - | chr7_1:68765054-68765073 | Msa1033570:intron | 35.0% |
| !! | GGTGTTGCTTTCTAAAACAA+AGG | + | chr7_1:68765084-68765103 | None:intergenic | 35.0% |
| AAAACATAGACATGCCAACT+AGG | + | chr7_1:68765216-68765235 | None:intergenic | 35.0% | |
| ATTATGGAGGCTGAGTTAAA+TGG | - | chr7_1:68765410-68765429 | Msa1033570:intron | 35.0% | |
| ! | GATCAGATACAATGTTGACT+TGG | + | chr7_1:68765700-68765719 | None:intergenic | 35.0% |
| AGTCAACATTGTATCTGATC+AGG | - | chr7_1:68765700-68765719 | Msa1033570:intron | 35.0% | |
| ! | AGCCATTTGAATGATGGAAT+CGG | - | chr7_1:68766105-68766124 | Msa1033570:intron | 35.0% |
| ACAACACATACAACACATCT+GGG | - | chr7_1:68766209-68766228 | Msa1033570:CDS | 35.0% | |
| ATTAAATCTGGGTCACACAA+AGG | + | chr7_1:68766250-68766269 | None:intergenic | 35.0% | |
| GATTCCATCGGAAAATACTT+GGG | + | chr7_1:68766293-68766312 | None:intergenic | 35.0% | |
| !! | AGCACTTGATTTGTCTCTTT+AGG | + | chr7_1:68766552-68766571 | None:intergenic | 35.0% |
| ! | TCTGCATAAAGCATTAGCAA+TGG | + | chr7_1:68766607-68766626 | None:intergenic | 35.0% |
| ! | ATTTTGTTGACGCAATGCAT+AGG | + | chr7_1:68766690-68766709 | None:intergenic | 35.0% |
| ACAAGCTGAGATTCAAACTT+TGG | + | chr7_1:68767000-68767019 | None:intergenic | 35.0% | |
| TTTGATAAATTGCAAGCAGG+TGG | - | chr7_1:68767391-68767410 | Msa1033570:intron | 35.0% | |
| TTCACCAATCAATACTCCAA+AGG | - | chr7_1:68767484-68767503 | Msa1033570:intron | 35.0% | |
| !! | TCAACCTTTGGAGTATTGAT+TGG | + | chr7_1:68767491-68767510 | None:intergenic | 35.0% |
| !! | CGGTCAAAGTTTTATGGATT+TGG | - | chr7_1:68767535-68767554 | Msa1033570:intron | 35.0% |
| ! | TATGGTTAGTTGGAGATGAA+TGG | - | chr7_1:68767740-68767759 | Msa1033570:intron | 35.0% |
| ! | ATGGTTAGTTGGAGATGAAT+GGG | - | chr7_1:68767741-68767760 | Msa1033570:intron | 35.0% |
| ATGGGATGAATATGAGCAAA+TGG | - | chr7_1:68767759-68767778 | Msa1033570:intron | 35.0% | |
| GGTATGAACAATGATCCTTT+CGG | + | chr7_1:68767790-68767809 | None:intergenic | 35.0% | |
| TTTGGAGGGAAATGAGAAAA+TGG | + | chr7_1:68767811-68767830 | None:intergenic | 35.0% | |
| ! | CTTTTCGCATTTTCTTTGGA+GGG | + | chr7_1:68767825-68767844 | None:intergenic | 35.0% |
| ! | TCTTTTCGCATTTTCTTTGG+AGG | + | chr7_1:68767826-68767845 | None:intergenic | 35.0% |
| TAATCATTGCTGGTGTATAG+TGG | + | chr7_1:68767858-68767877 | None:intergenic | 35.0% | |
| GGAATAATTCATGCCTTAGA+AGG | - | chr7_1:68768062-68768081 | Msa1033570:intron | 35.0% | |
| TAATTCATGCCTTAGAAGGA+TGG | - | chr7_1:68768066-68768085 | Msa1033570:intron | 35.0% | |
| ATGAACATTCCATCCTTCTA+AGG | + | chr7_1:68768078-68768097 | None:intergenic | 35.0% | |
| !! | CTGGTTTGGAAGCCATATTA+TGG | + | chr7_1:68762956-68762975 | None:intergenic | 40.0% |
| CATAATATGGCTTCCAAACC+AGG | - | chr7_1:68762954-68762973 | Msa1033570:three_prime_UTR | 40.0% | |
| ATATGCTATGAGCAATCCAC+GGG | + | chr7_1:68763258-68763277 | None:intergenic | 40.0% | |
| ACTCTTTCATATGGGGTGAA+AGG | - | chr7_1:68763278-68763297 | Msa1033570:intron | 40.0% | |
| CTCTTTCATATGGGGTGAAA+GGG | - | chr7_1:68763279-68763298 | Msa1033570:intron | 40.0% | |
| GGAAATATAGCTTGGTACAC+TGG | + | chr7_1:68763307-68763326 | None:intergenic | 40.0% | |
| GAATGCTACACAACCAGATT+TGG | - | chr7_1:68763341-68763360 | Msa1033570:intron | 40.0% | |
| TCACGTTACCAAACTGCTAA+AGG | - | chr7_1:68763373-68763392 | Msa1033570:intron | 40.0% | |
| CTTACAGCAATATTGCATGC+TGG | - | chr7_1:68763675-68763694 | Msa1033570:intron | 40.0% | |
| GCTCAGTGACAATTGAAGAA+TGG | + | chr7_1:68763779-68763798 | None:intergenic | 40.0% | |
| TATGACAAATGCTCGGCAAA+TGG | + | chr7_1:68764354-68764373 | None:intergenic | 40.0% | |
| ACTGCATCACACCAAATTCA+GGG | - | chr7_1:68764788-68764807 | Msa1033570:CDS | 40.0% | |
| ! | AGCCTCATTGATTAGACCAA+AGG | - | chr7_1:68764887-68764906 | Msa1033570:intron | 40.0% |
| CTCCTTTGGTCTAATCAATG+AGG | + | chr7_1:68764892-68764911 | None:intergenic | 40.0% | |
| TGTGTTAAGTGAACCACATC+TGG | + | chr7_1:68764918-68764937 | None:intergenic | 40.0% | |
| CCATTTAGATGTTTGAGGGT+TGG | + | chr7_1:68764997-68765016 | None:intergenic | 40.0% | |
| CCAACCCTCAAACATCTAAA+TGG | - | chr7_1:68764994-68765013 | Msa1033570:intron | 40.0% | |
| GGAGCAAAGGTGATAAGTTT+AGG | - | chr7_1:68765431-68765450 | Msa1033570:intron | 40.0% | |
| AGTGTTAGTTCATACTAGGC+TGG | - | chr7_1:68765537-68765556 | Msa1033570:intron | 40.0% | |
| !! | TGTTGACTTGGTGGTTTAGA+TGG | + | chr7_1:68765688-68765707 | None:intergenic | 40.0% |
| !! | CAGATACAATGTTGACTTGG+TGG | + | chr7_1:68765697-68765716 | None:intergenic | 40.0% |
| AAAAAACTAATAGGGCCCCA+AGG | + | chr7_1:68765861-68765880 | None:intergenic | 40.0% | |
| ! | GTGTGTTGGAGATTTTTACG+AGG | + | chr7_1:68765972-68765991 | None:intergenic | 40.0% |
| ! | GCCATTTGAATGATGGAATC+GGG | - | chr7_1:68766106-68766125 | Msa1033570:intron | 40.0% |
| TCCCGATTCCATCATTCAAA+TGG | + | chr7_1:68766110-68766129 | None:intergenic | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | - | chr7_1:68766148-68766167 | Msa1033570:intron | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | - | chr7_1:68766149-68766168 | Msa1033570:intron | 40.0% | |
| GATGTGTTGTATGTGTTGTG+TGG | + | chr7_1:68766208-68766227 | None:intergenic | 40.0% | |
| CACAACACATACAACACATC+TGG | - | chr7_1:68766208-68766227 | Msa1033570:CDS | 40.0% | |
| GTGACCCAGATTTAATGTCA+CGG | - | chr7_1:68766254-68766273 | Msa1033570:CDS | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | + | chr7_1:68766149-68766168 | None:intergenic | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | + | chr7_1:68766148-68766167 | None:intergenic | 40.0% | |
| GGATTCCATCGGAAAATACT+TGG | + | chr7_1:68766294-68766313 | None:intergenic | 40.0% | |
| ACAAATCAAGTGCTTCTTCG+AGG | - | chr7_1:68766558-68766577 | Msa1033570:intron | 40.0% | |
| TCTTCGAGGCAAGTTCAATA+AGG | - | chr7_1:68766572-68766591 | Msa1033570:intron | 40.0% | |
| !! | CGTTGATTTGATGGCTAGAA+TGG | + | chr7_1:68767071-68767090 | None:intergenic | 40.0% |
| !! | GGGATACAACGTTGATTTGA+TGG | + | chr7_1:68767080-68767099 | None:intergenic | 40.0% |
| GCAGGTGGCTGTATTATATA+AGG | - | chr7_1:68767406-68767425 | Msa1033570:intron | 40.0% | |
| CATCATGTCGAAAGAAAGCT+TGG | - | chr7_1:68767457-68767476 | Msa1033570:intron | 40.0% | |
| TGGATGGTGTGTTTAATGGT+GGG | + | chr7_1:68767607-68767626 | None:intergenic | 40.0% | |
| GTAGTAGGAGTAATCATTGC+TGG | + | chr7_1:68767868-68767887 | None:intergenic | 40.0% | |
| CATGCACTCATTACTCTTCT+TGG | + | chr7_1:68768032-68768051 | None:intergenic | 40.0% | |
| CAAGAAGAGTAATGAGTGCA+TGG | - | chr7_1:68768030-68768049 | Msa1033570:CDS | 40.0% | |
| GGATGGAATGTTCATGAATG+TGG | - | chr7_1:68768083-68768102 | Msa1033570:intron | 40.0% | |
| ! | TGCTTAGCACTGAGAAAGTA+TGG | - | chr7_1:68768114-68768133 | Msa1033570:intron | 40.0% |
| ! | GCTTAGCACTGAGAAAGTAT+GGG | - | chr7_1:68768115-68768134 | Msa1033570:intron | 40.0% |
| CATGGTAAGTTAGAGGCCAT+AGG | + | chr7_1:68763633-68763652 | None:intergenic | 45.0% | |
| CTATGGCCTCTAACTTACCA+TGG | - | chr7_1:68763631-68763650 | Msa1033570:intron | 45.0% | |
| TCTCCACCATGGTAAGTTAG+AGG | + | chr7_1:68763640-68763659 | None:intergenic | 45.0% | |
| ! | TTACCATGGTGGAGAACAGA+TGG | - | chr7_1:68763645-68763664 | Msa1033570:intron | 45.0% |
| AATATTGCATGCTGGACCAG+TGG | - | chr7_1:68763683-68763702 | Msa1033570:intron | 45.0% | |
| TCTTCAGTGGCTGCACTATA+TGG | - | chr7_1:68764423-68764442 | Msa1033570:intron | 45.0% | |
| CACTGCATCACACCAAATTC+AGG | - | chr7_1:68764787-68764806 | Msa1033570:CDS | 45.0% | |
| GGCTTCATATGTAGCATCTG+TGG | + | chr7_1:68764871-68764890 | None:intergenic | 45.0% | |
| ! | TGGCATGTCTATGTTTTCCC+TGG | - | chr7_1:68765219-68765238 | Msa1033570:intron | 45.0% |
| AAGAGAAGGACATGCATCCA+GGG | + | chr7_1:68765239-68765258 | None:intergenic | 45.0% | |
| GGCTGAGTTAAATGGAGCAA+AGG | - | chr7_1:68765418-68765437 | Msa1033570:intron | 45.0% | |
| CTCAAATCTGCTCACTTGGT+TGG | + | chr7_1:68765795-68765814 | None:intergenic | 45.0% | |
| CAACCAAGTGAGCAGATTTG+AGG | - | chr7_1:68765793-68765812 | Msa1033570:intron | 45.0% | |
| ACACCTCAAATCTGCTCACT+TGG | + | chr7_1:68765799-68765818 | None:intergenic | 45.0% | |
| ! | CAAAATCTCATGGGCTAAGC+TGG | - | chr7_1:68765834-68765853 | Msa1033570:intron | 45.0% |
| AGGGCATGCGAGAAATTCAT+AGG | - | chr7_1:68766023-68766042 | Msa1033570:intron | 45.0% | |
| GGGCATGCGAGAAATTCATA+GGG | - | chr7_1:68766024-68766043 | Msa1033570:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | + | chr7_1:68766156-68766175 | None:intergenic | 45.0% | |
| CACATTGCCACACAACATCT+AGG | - | chr7_1:68766182-68766201 | Msa1033570:CDS | 45.0% | |
| !! | CACAAAGGTGTTGTGTTGTG+TGG | + | chr7_1:68766235-68766254 | None:intergenic | 45.0% |
| ! | GTCACCCAAGTATTTTCCGA+TGG | - | chr7_1:68766286-68766305 | Msa1033570:CDS | 45.0% |
| GGATGGTGTGTTTAATGGTG+GGG | + | chr7_1:68767606-68767625 | None:intergenic | 45.0% | |
| GTGGATGGTGTGTTTAATGG+TGG | + | chr7_1:68767608-68767627 | None:intergenic | 45.0% | |
| GAGGTGGATGGTGTGTTTAA+TGG | + | chr7_1:68767611-68767630 | None:intergenic | 45.0% | |
| TGGGAAGCAAGTATTCGTCA+TGG | - | chr7_1:68768134-68768153 | Msa1033570:intron | 45.0% | |
| !! | AAAATTAAAAAAAACTAATA+GGG | + | chr7_1:68765869-68765888 | None:intergenic | 5.0% |
| !! | AAAAATTAAAAAAAACTAAT+AGG | + | chr7_1:68765870-68765889 | None:intergenic | 5.0% |
| !!! | TTTTTAAAAATAAAAGAAAA+TGG | + | chr7_1:68767515-68767534 | None:intergenic | 5.0% |
| !!! | TTTTCTTTTATTTTTAAAAA+CGG | - | chr7_1:68767515-68767534 | Msa1033570:intron | 5.0% |
| !!! | ATTTTAATTTATGTTATAAT+AGG | + | chr7_1:68767955-68767974 | None:intergenic | 5.0% |
| GTCTGTAAGGATGCCTGGTT+TGG | + | chr7_1:68762970-68762989 | None:intergenic | 50.0% | |
| AACCAGGCATCCTTACAGAC+TGG | - | chr7_1:68762970-68762989 | Msa1033570:three_prime_UTR | 50.0% | |
| GTTTCCAAGGCCAGTCTGTA+AGG | + | chr7_1:68762983-68763002 | None:intergenic | 50.0% | |
| AGTTCGTGATTCTAAGCCCG+TGG | - | chr7_1:68763239-68763258 | Msa1033570:CDS | 50.0% | |
| TGGCCTCTAACTTACCATGG+TGG | - | chr7_1:68763634-68763653 | Msa1033570:intron | 50.0% | |
| ACACCATCTGTTCTCCACCA+TGG | + | chr7_1:68763651-68763670 | None:intergenic | 50.0% | |
| ! | ATGGTGGAGAACAGATGGTG+TGG | - | chr7_1:68763650-68763669 | Msa1033570:intron | 50.0% |
| ATTTGCTCCTTGGCATCCAC+AGG | - | chr7_1:68764757-68764776 | Msa1033570:CDS | 50.0% | |
| AGTGAAACCTGTGGATGCCA+AGG | + | chr7_1:68764767-68764786 | None:intergenic | 50.0% | |
| GATGCAGTGAGTGAAACCTG+TGG | + | chr7_1:68764776-68764795 | None:intergenic | 50.0% | |
| ACCAAAGGAGTCACCAGATG+TGG | - | chr7_1:68764902-68764921 | Msa1033570:intron | 50.0% | |
| ACCACATCTGGTGACTCCTT+TGG | + | chr7_1:68764906-68764925 | None:intergenic | 50.0% | |
| CGCAAAAGTGACGACCTAGT+TGG | - | chr7_1:68765199-68765218 | Msa1033570:intron | 50.0% | |
| CAAGAGAAGGACATGCATCC+AGG | + | chr7_1:68765240-68765259 | None:intergenic | 50.0% | |
| !! | TGATGGAATCGGGAAGCACT+TGG | - | chr7_1:68766116-68766135 | Msa1033570:intron | 50.0% |
| !! | GATGGAATCGGGAAGCACTT+GGG | - | chr7_1:68766117-68766136 | Msa1033570:intron | 50.0% |
| GTGTGGCAATGTGTGTTGTG+TGG | + | chr7_1:68766175-68766194 | None:intergenic | 50.0% | |
| TGTGTGGCCTAGATGTTGTG+TGG | + | chr7_1:68766192-68766211 | None:intergenic | 50.0% | |
| CCATGAAACCCAACCCCAAA+TGG | + | chr7_1:68766948-68766967 | None:intergenic | 50.0% | |
| ! | CCATTTGGGGTTGGGTTTCA+TGG | - | chr7_1:68766945-68766964 | Msa1033570:intron | 50.0% |
| !! | GAGCAAATGGAAGCACCGAA+AGG | - | chr7_1:68767772-68767791 | Msa1033570:intron | 50.0% |
| ATGAGTGCATGGCGTATTGC+TGG | - | chr7_1:68768041-68768060 | Msa1033570:CDS | 50.0% | |
| GGGAACCCATTTGTCACACT+TGG | + | chr7_1:68768194-68768213 | None:intergenic | 50.0% | |
| !! | GCATCCTTACAGACTGGCCT+TGG | - | chr7_1:68762976-68762995 | Msa1033570:three_prime_UTR | 55.0% |
| !! | AGACTGGCCTTGGAAACCTC+TGG | - | chr7_1:68762986-68763005 | Msa1033570:three_prime_UTR | 55.0% |
| !! | GACTGGCCTTGGAAACCTCT+GGG | - | chr7_1:68762987-68763006 | Msa1033570:three_prime_UTR | 55.0% |
| !! | ACTGGCCTTGGAAACCTCTG+GGG | - | chr7_1:68762988-68763007 | Msa1033570:three_prime_UTR | 55.0% |
| AAGCTCCCCAGAGGTTTCCA+AGG | + | chr7_1:68762996-68763015 | None:intergenic | 55.0% | |
| ! | GAAACCTCTGGGGAGCTTCA+AGG | - | chr7_1:68762998-68763017 | Msa1033570:three_prime_UTR | 55.0% |
| AGAACCTTGAAGCTCCCCAG+AGG | + | chr7_1:68763005-68763024 | None:intergenic | 55.0% | |
| ! | TCATGGGCTAAGCTGGACCT+TGG | - | chr7_1:68765841-68765860 | Msa1033570:intron | 55.0% |
| ! | CATGGGCTAAGCTGGACCTT+GGG | - | chr7_1:68765842-68765861 | Msa1033570:intron | 55.0% |
| ! | ATGGGCTAAGCTGGACCTTG+GGG | - | chr7_1:68765843-68765862 | Msa1033570:intron | 55.0% |
| TCAACACGGTTGCAGCAGCT+AGG | + | chr7_1:68766521-68766540 | None:intergenic | 55.0% | |
| GGCCAGTCTGTAAGGATGCC+TGG | + | chr7_1:68762975-68762994 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 68762896 | 68768414 | 68762896 | ID=Msa1033570;Name=Msa1033570 |
| chr7_1 | mRNA | 68762896 | 68768414 | 68762896 | ID=Msa1033570-mRNA-1;Parent=Msa1033570;Name=Msa1033570-mRNA-1;_AED=0.38;_eAED=0.38;_QI=64|0.7|0.63|1|0.7|0.63|11|224|559 |
| chr7_1 | exon | 68762896 | 68763290 | 68762896 | ID=Msa1033570-mRNA-1:exon:16139;Parent=Msa1033570-mRNA-1 |
| chr7_1 | exon | 68763398 | 68763571 | 68763398 | ID=Msa1033570-mRNA-1:exon:16138;Parent=Msa1033570-mRNA-1 |
| chr7_1 | exon | 68763805 | 68763900 | 68763805 | ID=Msa1033570-mRNA-1:exon:16137;Parent=Msa1033570-mRNA-1 |
| chr7_1 | exon | 68764672 | 68764872 | 68764672 | ID=Msa1033570-mRNA-1:exon:16136;Parent=Msa1033570-mRNA-1 |
| chr7_1 | exon | 68765844 | 68765951 | 68765844 | ID=Msa1033570-mRNA-1:exon:16135;Parent=Msa1033570-mRNA-1 |
| chr7_1 | exon | 68766156 | 68766334 | 68766156 | ID=Msa1033570-mRNA-1:exon:16134;Parent=Msa1033570-mRNA-1 |
| chr7_1 | exon | 68766341 | 68766501 | 68766341 | ID=Msa1033570-mRNA-1:exon:16133;Parent=Msa1033570-mRNA-1 |
| chr7_1 | exon | 68766751 | 68766880 | 68766751 | ID=Msa1033570-mRNA-1:exon:16132;Parent=Msa1033570-mRNA-1 |
| chr7_1 | exon | 68767551 | 68767735 | 68767551 | ID=Msa1033570-mRNA-1:exon:16131;Parent=Msa1033570-mRNA-1 |
| chr7_1 | exon | 68767855 | 68768069 | 68767855 | ID=Msa1033570-mRNA-1:exon:16130;Parent=Msa1033570-mRNA-1 |
| chr7_1 | exon | 68768291 | 68768414 | 68768291 | ID=Msa1033570-mRNA-1:exon:16129;Parent=Msa1033570-mRNA-1 |
| chr7_1 | five_prime_UTR | 68768351 | 68768414 | 68768351 | ID=Msa1033570-mRNA-1:five_prime_utr;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68768291 | 68768350 | 68768291 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68767855 | 68768069 | 68767855 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68767551 | 68767735 | 68767551 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68766751 | 68766880 | 68766751 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68766341 | 68766501 | 68766341 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68766156 | 68766334 | 68766156 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68765844 | 68765951 | 68765844 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68764672 | 68764872 | 68764672 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68763805 | 68763900 | 68763805 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68763398 | 68763571 | 68763398 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | CDS | 68763120 | 68763290 | 68763120 | ID=Msa1033570-mRNA-1:cds;Parent=Msa1033570-mRNA-1 |
| chr7_1 | three_prime_UTR | 68762896 | 68763119 | 68762896 | ID=Msa1033570-mRNA-1:three_prime_utr;Parent=Msa1033570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
