Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160420 | XP_003625020.2 | 95.948 | 617 | 23 | 1 | 1 | 617 | 10 | 624 | 0.0 | 1210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160420 | sp|F4HVY0|CER1_ARATH | 58.548 | 620 | 248 | 3 | 1 | 611 | 1 | 620 | 0.0 | 749 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160420 | A0A396H383 | 95.948 | 617 | 23 | 1 | 1 | 617 | 10 | 624 | 0.0 | 1210 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1033570 | Msa1160420 | 0.904424 | 1.245675e-79 | -8.615850e-47 |
| Msa1073330 | Msa1160420 | 0.863549 | 2.299775e-64 | -8.615850e-47 |
| Msa1105020 | Msa1160420 | 0.833875 | 4.147942e-56 | -8.615850e-47 |
| Msa1160420 | Msa1233560 | 0.804464 | 2.133412e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160420 | MtrunA17_Chr7g0256371 | 95.948 | 617 | 23 | 1 | 1 | 617 | 10 | 624 | 0.0 | 1210 |
| Msa1160420 | MtrunA17_Chr7g0256391 | 88.979 | 617 | 68 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1125 |
| Msa1160420 | MtrunA17_Chr7g0256411 | 88.493 | 617 | 69 | 2 | 1 | 617 | 32 | 646 | 0.0 | 1114 |
| Msa1160420 | MtrunA17_Chr4g0026761 | 81.536 | 612 | 113 | 0 | 1 | 612 | 1 | 612 | 0.0 | 1031 |
| Msa1160420 | MtrunA17_Chr8g0337081 | 66.234 | 616 | 204 | 2 | 1 | 612 | 1 | 616 | 0.0 | 824 |
| Msa1160420 | MtrunA17_Chr8g0337101 | 62.500 | 616 | 226 | 3 | 1 | 611 | 37 | 652 | 0.0 | 805 |
| Msa1160420 | MtrunA17_Chr4g0026811 | 83.700 | 454 | 74 | 0 | 20 | 473 | 6 | 459 | 0.0 | 770 |
| Msa1160420 | MtrunA17_Chr4g0073231 | 32.051 | 624 | 404 | 6 | 8 | 613 | 5 | 626 | 8.72e-116 | 358 |
| Msa1160420 | MtrunA17_Chr2g0305431 | 33.333 | 288 | 181 | 3 | 8 | 284 | 5 | 292 | 1.18e-58 | 198 |
| Msa1160420 | MtrunA17_Chr4g0026821 | 71.429 | 91 | 26 | 0 | 471 | 561 | 3 | 93 | 6.60e-41 | 144 |
| Msa1160420 | MtrunA17_Chr2g0305451 | 31.651 | 218 | 141 | 3 | 404 | 613 | 2 | 219 | 9.01e-28 | 111 |
| Msa1160420 | MtrunA17_Chr4g0026831 | 84.091 | 44 | 7 | 0 | 569 | 612 | 1 | 44 | 2.08e-19 | 82.0 |
| Msa1160420 | MtrunA17_Chr2g0305441 | 28.571 | 119 | 85 | 0 | 289 | 407 | 43 | 161 | 2.94e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160420 | AT1G02205.2 | 58.548 | 620 | 248 | 3 | 1 | 611 | 1 | 620 | 0.0 | 749 |
| Msa1160420 | AT1G02205.3 | 58.240 | 625 | 247 | 3 | 1 | 611 | 1 | 625 | 0.0 | 746 |
| Msa1160420 | AT1G02205.4 | 57.737 | 601 | 245 | 3 | 20 | 611 | 21 | 621 | 0.0 | 712 |
| Msa1160420 | AT1G02190.1 | 56.731 | 624 | 255 | 7 | 1 | 611 | 1 | 622 | 0.0 | 701 |
| Msa1160420 | AT2G37700.3 | 56.331 | 616 | 263 | 4 | 1 | 611 | 1 | 615 | 0.0 | 693 |
| Msa1160420 | AT1G02190.2 | 56.410 | 624 | 253 | 8 | 1 | 611 | 1 | 618 | 0.0 | 692 |
| Msa1160420 | AT2G37700.1 | 56.006 | 616 | 256 | 5 | 1 | 611 | 1 | 606 | 0.0 | 684 |
| Msa1160420 | AT2G37700.4 | 52.597 | 616 | 249 | 5 | 1 | 611 | 1 | 578 | 0.0 | 627 |
| Msa1160420 | AT2G37700.2 | 57.082 | 473 | 201 | 2 | 1 | 472 | 1 | 472 | 0.0 | 541 |
| Msa1160420 | AT1G02205.1 | 55.011 | 449 | 196 | 2 | 169 | 611 | 8 | 456 | 2.89e-179 | 516 |
| Msa1160420 | AT1G02205.5 | 52.941 | 374 | 170 | 2 | 244 | 611 | 8 | 381 | 5.09e-143 | 421 |
| Msa1160420 | AT5G57800.1 | 33.704 | 629 | 397 | 10 | 8 | 617 | 5 | 632 | 2.11e-112 | 350 |
Find 138 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAGCCATATTATGAATT+TGG | 0.112185 | 7_4:+50312428 | None:intergenic |
| CCAATGTATGACTACATTTA+TGG | 0.163251 | 7_4:-50310514 | Msa1160420:CDS |
| TTCATCCCAAATTCATAATA+TGG | 0.212635 | 7_4:-50312434 | Msa1160420:exon |
| TGCTTAGCACTGAGAAAGTA+TGG | 0.261801 | 7_4:-50307390 | Msa1160420:CDS |
| ATGAAAGAACGTGAAATTTC+AGG | 0.263442 | 7_4:+50307010 | None:intergenic |
| GCCTAAACGTAATTGATAAA+TGG | 0.272397 | 7_4:+50310390 | None:intergenic |
| AAGTAAGAGAGGAGTTTCTT+AGG | 0.281109 | 7_4:+50310846 | None:intergenic |
| CATGCACTCATTACTCTTCT+TGG | 0.283707 | 7_4:+50307475 | None:intergenic |
| CTTGATTGAAGAAACAATTA+TGG | 0.293400 | 7_4:-50309951 | Msa1160420:CDS |
| GTAGTAATTTCAACACATTT+TGG | 0.294781 | 7_4:+50307180 | None:intergenic |
| TTTGGAGGGAAATGAGAAAA+TGG | 0.296760 | 7_4:+50307692 | None:intergenic |
| CATTGCATCACACCAAATTC+AGG | 0.302974 | 7_4:-50310558 | Msa1160420:CDS |
| TAGAGGAAGTATATCGATAA+TGG | 0.303413 | 7_4:+50307292 | None:intergenic |
| CCAACCCTCAAACATCTAAA+TGG | 0.304289 | 7_4:-50310351 | Msa1160420:CDS |
| GAATGCTACACAACCAGATT+TGG | 0.313054 | 7_4:-50312034 | Msa1160420:CDS |
| ATGAACATTCCATCCTTCTA+AGG | 0.317589 | 7_4:+50307429 | None:intergenic |
| TCTTCAGTGGCTGCACTATA+TGG | 0.317805 | 7_4:-50310927 | Msa1160420:CDS |
| GGAAGCCATATTATGAATTT+GGG | 0.323479 | 7_4:+50312429 | None:intergenic |
| ACTGCACTAGTATATTATAT+AGG | 0.328308 | 7_4:-50311781 | Msa1160420:CDS |
| TGAGTAATTAGCCCTGAATT+TGG | 0.335495 | 7_4:+50310546 | None:intergenic |
| AGCACTTGATTTGTCTCTTT+AGG | 0.336516 | 7_4:+50308947 | None:intergenic |
| TGCTTATGACTTGGATTTGT+GGG | 0.344010 | 7_4:-50310291 | Msa1160420:CDS |
| GGAGCAAAGGTGATAAGTTT+AGG | 0.355246 | 7_4:-50309914 | Msa1160420:CDS |
| TATCGACTTGTTCGAATTCA+AGG | 0.358353 | 7_4:+50311955 | None:intergenic |
| AGCATTCTGATCAACATAAA+AGG | 0.365500 | 7_4:+50312050 | None:intergenic |
| GCAGGTGGCTGTATTATATA+AGG | 0.367330 | 7_4:-50308093 | Msa1160420:intron |
| AATGGTGTGTGTGATAAGTT+TGG | 0.370527 | 7_4:+50306978 | None:intergenic |
| TTTGTGAGAATATTCTTTAG+AGG | 0.382170 | 7_4:+50307340 | None:intergenic |
| GGAATAATTCATGCCTTAGA+AGG | 0.384364 | 7_4:-50307442 | Msa1160420:CDS |
| TCCATTTATCAATTACGTTT+AGG | 0.386289 | 7_4:-50310391 | Msa1160420:CDS |
| ATTATGGAGGCTGAGTTAAA+TGG | 0.386727 | 7_4:-50309935 | Msa1160420:CDS |
| TCTTCGAGGCAAGTTCAATA+AGG | 0.388690 | 7_4:-50308924 | Msa1160420:CDS |
| GAAACCTCTGGGGAGCTTCA+AGG | 0.397370 | 7_4:-50312377 | Msa1160420:intron |
| GTCTGTAAGGATGCCTGGTT+TGG | 0.397427 | 7_4:+50312408 | None:intergenic |
| CTCTTTCATATGGGGTGAAA+GGG | 0.398310 | 7_4:-50312096 | Msa1160420:CDS |
| TGAGAATATTCTTTAGAGGT+TGG | 0.401910 | 7_4:+50307344 | None:intergenic |
| TGGGAAGCAAGTATTCTTCA+TGG | 0.404509 | 7_4:-50307370 | Msa1160420:CDS |
| CTGCACTAGTATATTATATA+GGG | 0.407039 | 7_4:-50311780 | Msa1160420:CDS |
| GCATCCTTACAGACTGGCCT+TGG | 0.407256 | 7_4:-50312399 | Msa1160420:CDS |
| ATAGCATATACTCTTTCATA+TGG | 0.411100 | 7_4:-50312106 | Msa1160420:CDS |
| AAAAGCAAGATTGTTGATAA+AGG | 0.411329 | 7_4:-50311978 | Msa1160420:CDS |
| TTGTAGCTTAAGATCATTGA+AGG | 0.414295 | 7_4:+50310243 | None:intergenic |
| TGTGAATTCATGAATGTAGT+AGG | 0.418846 | 7_4:+50307620 | None:intergenic |
| ACCACATCTGGTGACTCCTT+TGG | 0.419685 | 7_4:+50310442 | None:intergenic |
| GTATGAGAGATACTTCAAAA+TGG | 0.422668 | 7_4:+50310821 | None:intergenic |
| GTGAAATAGAAATCCAAATC+TGG | 0.423701 | 7_4:+50312021 | None:intergenic |
| AAAGAGTTCATACAAGTGAT+AGG | 0.424171 | 7_4:+50311577 | None:intergenic |
| ATGAGTGCATGGCGTATTGC+TGG | 0.430094 | 7_4:-50307463 | Msa1160420:CDS |
| AAGTTTAGGACTTCTAAATC+AGG | 0.430707 | 7_4:-50309900 | Msa1160420:intron |
| TATGACAAATGCTCGGCAAA+TGG | 0.431071 | 7_4:+50310999 | None:intergenic |
| TTGAAGATAAAAGTTGTAGA+TGG | 0.435173 | 7_4:-50309007 | Msa1160420:CDS |
| TCACGTTACCAAACTGCTAA+AGG | 0.436168 | 7_4:-50312002 | Msa1160420:CDS |
| AATTAACCAAGTGTGACAAA+TGG | 0.438907 | 7_4:-50307319 | Msa1160420:exon |
| ATGATCTTAAGCTACAAAGT+TGG | 0.442074 | 7_4:-50310237 | Msa1160420:CDS |
| AGCATAGAGAACATTGTAAA+GGG | 0.447415 | 7_4:+50310310 | None:intergenic |
| AGAGGAAGTATATCGATAAT+GGG | 0.448082 | 7_4:+50307293 | None:intergenic |
| GATACCATTTAGATGTTTGA+GGG | 0.449852 | 7_4:+50310347 | None:intergenic |
| GATAACGAGAGTATAAATAA+TGG | 0.451529 | 7_4:+50311632 | None:intergenic |
| TAGCATATACTCTTTCATAT+GGG | 0.452930 | 7_4:-50312105 | Msa1160420:CDS |
| CATAATATGGCTTCCAAACC+AGG | 0.454942 | 7_4:-50312421 | Msa1160420:exon |
| TATGAGAGATACTTCAAAAT+GGG | 0.456294 | 7_4:+50310822 | None:intergenic |
| TATGGTTAGTTGGAGATGAA+TGG | 0.456856 | 7_4:-50307760 | Msa1160420:CDS |
| ATGCTTATGACTTGGATTTG+TGG | 0.457920 | 7_4:-50310292 | Msa1160420:CDS |
| TGTGTTAAGTGCACCACATC+TGG | 0.460275 | 7_4:+50310430 | None:intergenic |
| GGAAATATAGCTTGGTACAC+TGG | 0.463338 | 7_4:+50312071 | None:intergenic |
| GTTTCCAAGGCCAGTCTGTA+AGG | 0.467818 | 7_4:+50312395 | None:intergenic |
| GTAGTAGGAGTAATCATTGC+TGG | 0.470094 | 7_4:+50307635 | None:intergenic |
| GGTGTTGCTTTCTAAAACAA+AGG | 0.470122 | 7_4:+50310264 | None:intergenic |
| GGCCAGTCTGTAAGGATGCC+TGG | 0.476832 | 7_4:+50312403 | None:intergenic |
| TCAACCTTTGGAGTATTGAT+TGG | 0.477115 | 7_4:+50308011 | None:intergenic |
| AGGGTACATGATATTTCCTA+TGG | 0.477158 | 7_4:-50311761 | Msa1160420:CDS |
| ATTAACCAAGTGTGACAAAT+GGG | 0.477221 | 7_4:-50307318 | Msa1160420:exon |
| ATCTAAAAGATATGGTTAGT+TGG | 0.480880 | 7_4:-50307770 | Msa1160420:intron |
| AGATACCATTTAGATGTTTG+AGG | 0.483611 | 7_4:+50310346 | None:intergenic |
| AGACTGGCCTTGGAAACCTC+TGG | 0.487844 | 7_4:-50312389 | Msa1160420:CDS |
| GACTGGCCTTGGAAACCTCT+GGG | 0.488240 | 7_4:-50312388 | Msa1160420:CDS |
| ACTCTTTCATATGGGGTGAA+AGG | 0.491070 | 7_4:-50312097 | Msa1160420:CDS |
| CCATTTAGATGTTTGAGGGT+TGG | 0.492002 | 7_4:+50310351 | None:intergenic |
| ATGGGATGAATATGAGCAAA+TGG | 0.495092 | 7_4:-50307741 | Msa1160420:CDS |
| GGGAACCCATTTGTCACACT+TGG | 0.495754 | 7_4:+50307313 | None:intergenic |
| AAGCATAGAGAACATTGTAA+AGG | 0.498475 | 7_4:+50310309 | None:intergenic |
| ATGGTTAGTTGGAGATGAAT+GGG | 0.501106 | 7_4:-50307759 | Msa1160420:CDS |
| TGTTCTCTATGCTTATGACT+TGG | 0.508587 | 7_4:-50310300 | Msa1160420:CDS |
| CTATGGCTTCTAATTTACCA+TGG | 0.513639 | 7_4:-50311744 | Msa1160420:CDS |
| CATTGATTTCATGAACAACA+TGG | 0.515742 | 7_4:-50310892 | Msa1160420:CDS |
| GGTATGAACAATGATCCTTT+CGG | 0.516935 | 7_4:+50307713 | None:intergenic |
| ACAAATCAAGTGCTTCTTCG+AGG | 0.524077 | 7_4:-50308938 | Msa1160420:CDS |
| GAAATTGAAACATGGATACA+TGG | 0.528938 | 7_4:+50307202 | None:intergenic |
| GCTTATAGATCTTAGACAAA+GGG | 0.537060 | 7_4:-50308066 | Msa1160420:CDS |
| AGCTTATAGATCTTAGACAA+AGG | 0.539004 | 7_4:-50308067 | Msa1160420:CDS |
| ACTGTGAACATTATATTCAA+AGG | 0.541828 | 7_4:-50309039 | Msa1160420:CDS |
| TAATCATTGCTGGTGTATAG+TGG | 0.543081 | 7_4:+50307645 | None:intergenic |
| AAGTCGATAGAGAAACCAAT+TGG | 0.548372 | 7_4:-50311941 | Msa1160420:intron |
| CATCATGTCGAAAGAAAGCT+TGG | 0.558066 | 7_4:-50308042 | Msa1160420:CDS |
| TAATTCATGCCTTAGAAGGA+TGG | 0.560259 | 7_4:-50307438 | Msa1160420:CDS |
| ACATAAAAGGAAATATAGCT+TGG | 0.563782 | 7_4:+50312063 | None:intergenic |
| ATTGCATCACACCAAATTCA+GGG | 0.564739 | 7_4:-50310557 | Msa1160420:CDS |
| CTCCTTTGGTCTAATCAATG+AGG | 0.565009 | 7_4:+50310456 | None:intergenic |
| ATGAACAATGTTGTCAACAT+TGG | 0.568859 | 7_4:+50310957 | None:intergenic |
| CTTACAGCAATATTGCATGC+TGG | 0.570938 | 7_4:-50311700 | Msa1160420:CDS |
| GCTCAGTGACAATTGAAGAA+TGG | 0.571470 | 7_4:+50311599 | None:intergenic |
| GCTTAGCACTGAGAAAGTAT+GGG | 0.577653 | 7_4:-50307389 | Msa1160420:CDS |
| GGCTGAGTTAAATGGAGCAA+AGG | 0.578535 | 7_4:-50309927 | Msa1160420:CDS |
| TTCACCAATCAATACTCCAA+AGG | 0.582765 | 7_4:-50308015 | Msa1160420:intron |
| TCTGCATAAAGCATTAGCAA+TGG | 0.584639 | 7_4:+50308892 | None:intergenic |
| CCATAAATGTAGTCATACAT+TGG | 0.586111 | 7_4:+50310514 | None:intergenic |
| CATGAATTCACACTCTTGTG+AGG | 0.587054 | 7_4:-50307609 | Msa1160420:intron |
| GTTTGTTATGCATTAATACA+CGG | 0.587856 | 7_4:-50307259 | Msa1160420:three_prime_UTR |
| AAGCTCCCCAGAGGTTTCCA+AGG | 0.587944 | 7_4:+50312382 | None:intergenic |
| AACAAACTTTGTCAAAGTAG+AGG | 0.588982 | 7_4:+50307275 | None:intergenic |
| ACCAAAGGAGTCACCAGATG+TGG | 0.589164 | 7_4:-50310443 | Msa1160420:CDS |
| GGCTTCATATGTAGCATCTG+TGG | 0.589327 | 7_4:+50310477 | None:intergenic |
| AGCCTCATTGATTAGACCAA+AGG | 0.589348 | 7_4:-50310458 | Msa1160420:CDS |
| CAAGAAGAGTAATGAGTGCA+TGG | 0.592300 | 7_4:-50307474 | Msa1160420:CDS |
| ATTGATTTCATGAACAACAT+GGG | 0.593212 | 7_4:-50310891 | Msa1160420:CDS |
| TGTAAAATATGACAAATGCT+CGG | 0.593397 | 7_4:+50310992 | None:intergenic |
| AACCAGGCATCCTTACAGAC+TGG | 0.594883 | 7_4:-50312405 | Msa1160420:CDS |
| TTACCATGGTGGAGAACAGA+TGG | 0.597460 | 7_4:-50311730 | Msa1160420:CDS |
| CATGGTAAATTAGAAGCCAT+AGG | 0.599980 | 7_4:+50311745 | None:intergenic |
| ATATGCTATGAGCAATCCAC+GGG | 0.601636 | 7_4:+50312120 | None:intergenic |
| AGCATATACTCTTTCATATG+GGG | 0.606631 | 7_4:-50312104 | Msa1160420:CDS |
| GGATGGAATGTTCATGAATG+TGG | 0.610974 | 7_4:-50307421 | Msa1160420:CDS |
| AGTTCGTGATTCTAAGCCCG+TGG | 0.612195 | 7_4:-50312136 | Msa1160420:CDS |
| TTTAGGAATGTTGTTCAACA+CGG | 0.612745 | 7_4:+50308964 | None:intergenic |
| AATGGTATCTACATTTAATG+TGG | 0.614475 | 7_4:-50310333 | Msa1160420:CDS |
| TCAAAATGGGAAAGTAAGAG+AGG | 0.615999 | 7_4:+50310835 | None:intergenic |
| TCAACACGGTTGCAGCAGCT+AGG | 0.626529 | 7_4:+50308978 | None:intergenic |
| GATTGAAGAAACAATTATGG+AGG | 0.627286 | 7_4:-50309948 | Msa1160420:CDS |
| TGGCTTCTAATTTACCATGG+TGG | 0.628032 | 7_4:-50311741 | Msa1160420:CDS |
| TATATGCTATGAGCAATCCA+CGG | 0.638673 | 7_4:+50312119 | None:intergenic |
| AATATTGCATGCTGGACCAG+TGG | 0.640771 | 7_4:-50311692 | Msa1160420:CDS |
| GAGCAAATGGAAGCACCGAA+AGG | 0.641337 | 7_4:-50307728 | Msa1160420:CDS |
| TCATTGCTGGTGTATAGTGG+TGG | 0.652055 | 7_4:+50307648 | None:intergenic |
| TATACCAAGATTTAAAACAC+AGG | 0.658845 | 7_4:-50310212 | Msa1160420:intron |
| ACACCATCTGTTCTCCACCA+TGG | 0.679185 | 7_4:+50311727 | None:intergenic |
| ACTGGCCTTGGAAACCTCTG+GGG | 0.699980 | 7_4:-50312387 | Msa1160420:CDS |
| AGAACCTTGAAGCTCCCCAG+AGG | 0.725693 | 7_4:+50312373 | None:intergenic |
| ATGGTGGAGAACAGATGGTG+TGG | 0.733193 | 7_4:-50311725 | Msa1160420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTACTAAATTAATAGAA+GGG | + | chr7_4:50309540-50309559 | None:intergenic | 10.0% |
| !! | ATATTTACTAAATTAATAGA+AGG | + | chr7_4:50309541-50309560 | None:intergenic | 10.0% |
| !!! | TTTTTCTATTGTTTTTTTAA+AGG | - | chr7_4:50309624-50309643 | Msa1160420:intron | 10.0% |
| !!! | TTTTCTATTGTTTTTTTAAA+GGG | - | chr7_4:50309625-50309644 | Msa1160420:intron | 10.0% |
| !!! | AACTTTTATATATATCTTTA+TGG | - | chr7_4:50310270-50310289 | Msa1160420:CDS | 10.0% |
| !! | ATATAAAATGAAATATATAG+TGG | + | chr7_4:50310652-50310671 | None:intergenic | 10.0% |
| !! | AAATTAATTAATTAACCATT+TGG | - | chr7_4:50310834-50310853 | Msa1160420:CDS | 10.0% |
| !! | AATTAATTAATTAACCATTT+GGG | - | chr7_4:50310835-50310854 | Msa1160420:CDS | 10.0% |
| !!! | AAACATACAATTTTTTTTTA+AGG | - | chr7_4:50311075-50311094 | Msa1160420:intron | 10.0% |
| !! | TTAAAGGGAAATAAAATATT+TGG | + | chr7_4:50307492-50307511 | None:intergenic | 15.0% |
| !! | GATAAAGAGAAATATTTAAA+GGG | + | chr7_4:50307507-50307526 | None:intergenic | 15.0% |
| !! | AGATAAAGAGAAATATTTAA+AGG | + | chr7_4:50307508-50307527 | None:intergenic | 15.0% |
| !!! | AAAAATGTTGTTTATAAATG+TGG | - | chr7_4:50307944-50307963 | Msa1160420:intron | 15.0% |
| !! | TAGGTTTAGTAAATTAAATA+AGG | - | chr7_4:50307972-50307991 | Msa1160420:intron | 15.0% |
| !!! | ATGTATTTTTTAATGTCTAA+AGG | + | chr7_4:50308057-50308076 | None:intergenic | 15.0% |
| !! | TTGTATACTTAAACATAATT+TGG | + | chr7_4:50308098-50308117 | None:intergenic | 15.0% |
| !! | ATTTACTAAATTAATAGAAG+GGG | + | chr7_4:50309539-50309558 | None:intergenic | 15.0% |
| !! | TAAATAAACATTAGTTACTA+CGG | - | chr7_4:50310690-50310709 | Msa1160420:intron | 15.0% |
| !! | ATTAATTAATTAACCATTTG+GGG | - | chr7_4:50310836-50310855 | Msa1160420:CDS | 15.0% |
| !! | CATTAAATATGAATACTTAA+GGG | + | chr7_4:50311004-50311023 | None:intergenic | 15.0% |
| !! | ACATTAAATATGAATACTTA+AGG | + | chr7_4:50311005-50311024 | None:intergenic | 15.0% |
| !!! | AATTTTTAGATTAGAAACTA+GGG | + | chr7_4:50312178-50312197 | None:intergenic | 15.0% |
| !!! | AAATTTTTAGATTAGAAACT+AGG | + | chr7_4:50312179-50312198 | None:intergenic | 15.0% |
| !!! | GTTAATTTTATTTTGTAAGA+AGG | - | chr7_4:50312256-50312275 | Msa1160420:intron | 15.0% |
| !!! | TCATCGTTTTTATTTTTAAA+TGG | + | chr7_4:50312444-50312463 | None:intergenic | 15.0% |
| !! | ATTTAAAAATAAAAACGATG+AGG | - | chr7_4:50312443-50312462 | Msa1160420:five_prime_UTR | 15.0% |
| !! | ATAATATAGACAGACTATAA+TGG | - | chr7_4:50307882-50307901 | Msa1160420:intron | 20.0% |
| !! | ATACTTAAACATAATTTGGA+TGG | + | chr7_4:50308094-50308113 | None:intergenic | 20.0% |
| !! | GTATATTTGAACATAAATTG+TGG | + | chr7_4:50308158-50308177 | None:intergenic | 20.0% |
| !! | TATAAATTCTTGTCCAAATT+TGG | - | chr7_4:50308321-50308340 | Msa1160420:intron | 20.0% |
| !! | AAATTAATTGAGACCAAATT+TGG | + | chr7_4:50308337-50308356 | None:intergenic | 20.0% |
| !! | AAATTTGGTCTCAATTAATT+TGG | - | chr7_4:50308336-50308355 | Msa1160420:intron | 20.0% |
| !! | AAAAAATTGTAAACTTACGA+TGG | + | chr7_4:50308609-50308628 | None:intergenic | 20.0% |
| !! | TAAGTTTACAATGTTACTAT+TGG | - | chr7_4:50308643-50308662 | Msa1160420:intron | 20.0% |
| !! | TTTGAGAAATACTACAAAAT+AGG | + | chr7_4:50309406-50309425 | None:intergenic | 20.0% |
| !!! | ATTTTGTAGTATTTCTCAAA+AGG | - | chr7_4:50309406-50309425 | Msa1160420:intron | 20.0% |
| !!! | TTTTGTAGTATTTCTCAAAA+GGG | - | chr7_4:50309407-50309426 | Msa1160420:intron | 20.0% |
| !! | ATTTGAAGGTTATAATTGAT+TGG | + | chr7_4:50309818-50309837 | None:intergenic | 20.0% |
| !! | TTGGAAATAAAATCATTTGA+AGG | + | chr7_4:50309832-50309851 | None:intergenic | 20.0% |
| !! | TCATGATTATATAATCTGAA+CGG | - | chr7_4:50309986-50310005 | Msa1160420:CDS | 20.0% |
| !!! | TTTTTTGTGCTAAAATCTAT+CGG | + | chr7_4:50310176-50310195 | None:intergenic | 20.0% |
| !! | TTCAGATTTATCCTATTTAT+CGG | + | chr7_4:50310249-50310268 | None:intergenic | 20.0% |
| !!! | TTTGATTTGAATAACATTGA+TGG | - | chr7_4:50310314-50310333 | Msa1160420:CDS | 20.0% |
| !!! | TTGATTTGAATAACATTGAT+GGG | - | chr7_4:50310315-50310334 | Msa1160420:CDS | 20.0% |
| !! | TTAAAAAGTCAGTAATAAGA+AGG | + | chr7_4:50310948-50310967 | None:intergenic | 20.0% |
| !! | ACAAATTAATTATGAGTGAT+TGG | - | chr7_4:50311106-50311125 | Msa1160420:intron | 20.0% |
| !! | TTTATCTCATCTAAAAGATA+TGG | - | chr7_4:50311623-50311642 | Msa1160420:CDS | 20.0% |
| !! | ATGTATTTATGTAACAGAAT+TGG | - | chr7_4:50311900-50311919 | Msa1160420:intron | 20.0% |
| !! | TAGTTCATGTGAAAAATATA+AGG | - | chr7_4:50312361-50312380 | Msa1160420:intron | 20.0% |
| ! | TTCATCCCAAATTCATAATA+TGG | - | chr7_4:50306967-50306986 | Msa1160420:three_prime_UTR | 25.0% |
| ! | ATAGCATATACTCTTTCATA+TGG | - | chr7_4:50307295-50307314 | Msa1160420:three_prime_UTR | 25.0% |
| ! | TAGCATATACTCTTTCATAT+GGG | - | chr7_4:50307296-50307315 | Msa1160420:three_prime_UTR | 25.0% |
| ! | ACATAAAAGGAAATATAGCT+TGG | + | chr7_4:50307341-50307360 | None:intergenic | 25.0% |
| !! | AAAAGCAAGATTGTTGATAA+AGG | - | chr7_4:50307423-50307442 | Msa1160420:CDS | 25.0% |
| !! | AATATTTGGAACTAACCAAT+TGG | + | chr7_4:50307478-50307497 | None:intergenic | 25.0% |
| ! | ACTGCACTAGTATATTATAT+AGG | - | chr7_4:50307620-50307639 | Msa1160420:CDS | 25.0% |
| ! | CTGCACTAGTATATTATATA+GGG | - | chr7_4:50307621-50307640 | Msa1160420:CDS | 25.0% |
| !! | GATAACGAGAGTATAAATAA+TGG | + | chr7_4:50307772-50307791 | None:intergenic | 25.0% |
| ! | GTTTATAAATGTGGTTAACT+AGG | - | chr7_4:50307953-50307972 | Msa1160420:intron | 25.0% |
| ! | GTAAATCACATTCAAAATTG+TGG | + | chr7_4:50308035-50308054 | None:intergenic | 25.0% |
| !!! | GATTAATTGTGTTATTTGCA+TGG | - | chr7_4:50308211-50308230 | Msa1160420:intron | 25.0% |
| ! | TGTAAAATATGACAAATGCT+CGG | + | chr7_4:50308412-50308431 | None:intergenic | 25.0% |
| !! | ATTGATTTCATGAACAACAT+GGG | - | chr7_4:50308510-50308529 | Msa1160420:intron | 25.0% |
| ! | TATGAGAGATACTTCAAAAT+GGG | + | chr7_4:50308582-50308601 | None:intergenic | 25.0% |
| ! | TCCATTTATCAATTACGTTT+AGG | - | chr7_4:50309010-50309029 | Msa1160420:CDS | 25.0% |
| ! | AATGGTATCTACATTTAATG+TGG | - | chr7_4:50309068-50309087 | Msa1160420:intron | 25.0% |
| !! | TATACCAAGATTTAAAACAC+AGG | - | chr7_4:50309189-50309208 | Msa1160420:intron | 25.0% |
| !!! | AATACCTGTGTTTTAAATCT+TGG | + | chr7_4:50309196-50309215 | None:intergenic | 25.0% |
| !! | ATCTAAAATCACAAATGAGA+AGG | + | chr7_4:50309227-50309246 | None:intergenic | 25.0% |
| !!! | TTTTTAACTGAATCAAGAGA+AGG | + | chr7_4:50309309-50309328 | None:intergenic | 25.0% |
| ! | TAAAAAATTTGCATTCTCTG+TGG | - | chr7_4:50309333-50309352 | Msa1160420:intron | 25.0% |
| ! | CTTGATTGAAGAAACAATTA+TGG | - | chr7_4:50309450-50309469 | Msa1160420:intron | 25.0% |
| ! | AGGGAAAATATTTGTATTGT+TGG | - | chr7_4:50309644-50309663 | Msa1160420:intron | 25.0% |
| ! | AGCAATCATCAAAATCTTAT+GGG | - | chr7_4:50309881-50309900 | Msa1160420:intron | 25.0% |
| !!! | TAAAATGTTTTAACGTGTGT+TGG | + | chr7_4:50310034-50310053 | None:intergenic | 25.0% |
| ! | TTAGATCTTAGAATCAGAAT+AGG | - | chr7_4:50310051-50310070 | Msa1160420:intron | 25.0% |
| ! | TAGATCTTAGAATCAGAATA+GGG | - | chr7_4:50310052-50310071 | Msa1160420:intron | 25.0% |
| !! | AGTAATGATCTTATTTGCTT+AGG | - | chr7_4:50310102-50310121 | Msa1160420:intron | 25.0% |
| !! | GTAATGATCTTATTTGCTTA+GGG | - | chr7_4:50310103-50310122 | Msa1160420:intron | 25.0% |
| !! | TAATGATCTTATTTGCTTAG+GGG | - | chr7_4:50310104-50310123 | Msa1160420:intron | 25.0% |
| !!! | ATTCAAATGGCTTTTTTTTC+GGG | + | chr7_4:50310145-50310164 | None:intergenic | 25.0% |
| !!! | CATTCAAATGGCTTTTTTTT+CGG | + | chr7_4:50310146-50310165 | None:intergenic | 25.0% |
| ! | AAAAAAAGCCATTTGAATGA+TGG | - | chr7_4:50310147-50310166 | Msa1160420:intron | 25.0% |
| !!! | GATAGATTTTAGCACAAAAA+AGG | - | chr7_4:50310175-50310194 | Msa1160420:intron | 25.0% |
| ! | AAAAATACGTTCCGATAAAT+AGG | - | chr7_4:50310235-50310254 | Msa1160420:CDS | 25.0% |
| ! | TGGAATTCGAAGTAAAATAA+TGG | - | chr7_4:50310290-50310309 | Msa1160420:CDS | 25.0% |
| ! | ACTGTGAACATTATATTCAA+AGG | - | chr7_4:50310362-50310381 | Msa1160420:CDS | 25.0% |
| !! | CAACTTTTATCTTCAATTGT+GGG | + | chr7_4:50310390-50310409 | None:intergenic | 25.0% |
| !! | ACAACTTTTATCTTCAATTG+TGG | + | chr7_4:50310391-50310410 | None:intergenic | 25.0% |
| ! | TTGAAGATAAAAGTTGTAGA+TGG | - | chr7_4:50310394-50310413 | Msa1160420:CDS | 25.0% |
| ! | TTTATGCAGAAAAAATGTAC+AGG | - | chr7_4:50310522-50310541 | Msa1160420:CDS | 25.0% |
| ! | TCACTGTCTCATAATAAATA+TGG | + | chr7_4:50310781-50310800 | None:intergenic | 25.0% |
| ! | AATATGATTAACTCAAGTAG+AGG | - | chr7_4:50311037-50311056 | Msa1160420:intron | 25.0% |
| !! | ATATATTTCGAGTCGATATT+TGG | + | chr7_4:50311176-50311195 | None:intergenic | 25.0% |
| !! | AATTTGCTCTCTGAAAAAAT+TGG | + | chr7_4:50311224-50311243 | None:intergenic | 25.0% |
| !!! | TTTTTTGATAAATTGCAAGC+AGG | - | chr7_4:50311290-50311309 | Msa1160420:intron | 25.0% |
| !! | TAAAAACGGTCAAAGTTTTA+TGG | - | chr7_4:50311431-50311450 | Msa1160420:intron | 25.0% |
| ! | GATTCCATAAAATTATCAAG+AGG | + | chr7_4:50311532-50311551 | None:intergenic | 25.0% |
| !!! | AGACATTGATTCATCATTTA+AGG | + | chr7_4:50311554-50311573 | None:intergenic | 25.0% |
| ! | TATTATGAGTCTAACATAAC+AGG | - | chr7_4:50311592-50311611 | Msa1160420:CDS | 25.0% |
| ! | ATCTAAAAGATATGGTTAGT+TGG | - | chr7_4:50311631-50311650 | Msa1160420:CDS | 25.0% |
| ! | TATAATAGGTACTATACTGA+AGG | + | chr7_4:50311842-50311861 | None:intergenic | 25.0% |
| ! | TTTGTGAGAATATTCTTTAG+AGG | + | chr7_4:50312064-50312083 | None:intergenic | 25.0% |
| !!! | GTTTGTTATGCATTAATACA+CGG | - | chr7_4:50312142-50312161 | Msa1160420:intron | 25.0% |
| !!! | ACATTTTGGAAATTGAAACA+TGG | + | chr7_4:50312210-50312229 | None:intergenic | 25.0% |
| !! | GTAGTAATTTCAACACATTT+TGG | + | chr7_4:50312224-50312243 | None:intergenic | 25.0% |
| GGAAGCCATATTATGAATTT+GGG | + | chr7_4:50306975-50306994 | None:intergenic | 30.0% | |
| TGGAAGCCATATTATGAATT+TGG | + | chr7_4:50306976-50306995 | None:intergenic | 30.0% | |
| AGCATATACTCTTTCATATG+GGG | - | chr7_4:50307297-50307316 | Msa1160420:three_prime_UTR | 30.0% | |
| AGCATTCTGATCAACATAAA+AGG | + | chr7_4:50307354-50307373 | None:intergenic | 30.0% | |
| GTGAAATAGAAATCCAAATC+TGG | + | chr7_4:50307383-50307402 | None:intergenic | 30.0% | |
| CAATAGTATAAAAACTCCAC+TGG | + | chr7_4:50307728-50307747 | None:intergenic | 30.0% | |
| ! | CAGTGGAGTTTTTATACTAT+TGG | - | chr7_4:50307726-50307745 | Msa1160420:CDS | 30.0% |
| AAAGAGTTCATACAAGTGAT+AGG | + | chr7_4:50307827-50307846 | None:intergenic | 30.0% | |
| ATGAACAATGTTGTCAACAT+TGG | + | chr7_4:50308447-50308466 | None:intergenic | 30.0% | |
| GTTCATCAAAAAATCTTCAG+TGG | - | chr7_4:50308461-50308480 | Msa1160420:intron | 30.0% | |
| !! | CATTGATTTCATGAACAACA+TGG | - | chr7_4:50308509-50308528 | Msa1160420:intron | 30.0% |
| GTATGAGAGATACTTCAAAA+TGG | + | chr7_4:50308583-50308602 | None:intergenic | 30.0% | |
| GGAGCAAATAAATTAGCATA+TGG | + | chr7_4:50308802-50308821 | None:intergenic | 30.0% | |
| CCATAAATGTAGTCATACAT+TGG | + | chr7_4:50308890-50308909 | None:intergenic | 30.0% | |
| CCAATGTATGACTACATTTA+TGG | - | chr7_4:50308887-50308906 | Msa1160420:CDS | 30.0% | |
| GCCTAAACGTAATTGATAAA+TGG | + | chr7_4:50309014-50309033 | None:intergenic | 30.0% | |
| GATACCATTTAGATGTTTGA+GGG | + | chr7_4:50309057-50309076 | None:intergenic | 30.0% | |
| AGATACCATTTAGATGTTTG+AGG | + | chr7_4:50309058-50309077 | None:intergenic | 30.0% | |
| AGCATAGAGAACATTGTAAA+GGG | + | chr7_4:50309094-50309113 | None:intergenic | 30.0% | |
| AAGCATAGAGAACATTGTAA+AGG | + | chr7_4:50309095-50309114 | None:intergenic | 30.0% | |
| TTGTAGCTTAAGATCATTGA+AGG | + | chr7_4:50309161-50309180 | None:intergenic | 30.0% | |
| ATGATCTTAAGCTACAAAGT+TGG | - | chr7_4:50309164-50309183 | Msa1160420:intron | 30.0% | |
| TTACCAATGAAATACTCGTT+TGG | - | chr7_4:50309377-50309396 | Msa1160420:intron | 30.0% | |
| AAACCAAACGAGTATTTCAT+TGG | + | chr7_4:50309383-50309402 | None:intergenic | 30.0% | |
| GATTGAAGAAACAATTATGG+AGG | - | chr7_4:50309453-50309472 | Msa1160420:intron | 30.0% | |
| ! | AAGTTTAGGACTTCTAAATC+AGG | - | chr7_4:50309501-50309520 | Msa1160420:intron | 30.0% |
| TATGAGTGTTAGTTCATACT+AGG | - | chr7_4:50309589-50309608 | Msa1160420:intron | 30.0% | |
| GAGCAATCATCAAAATCTTA+TGG | - | chr7_4:50309880-50309899 | Msa1160420:intron | 30.0% | |
| ! | AATGATCTTATTTGCTTAGG+GGG | - | chr7_4:50310105-50310124 | Msa1160420:intron | 30.0% |
| TTTAGCACAAAAAAGGCAAT+CGG | - | chr7_4:50310182-50310201 | Msa1160420:intron | 30.0% | |
| TTTAGGAATGTTGTTCAACA+CGG | + | chr7_4:50310440-50310459 | None:intergenic | 30.0% | |
| ! | ATTAATTAACCATTTGGGGT+TGG | - | chr7_4:50310840-50310859 | Msa1160420:CDS | 30.0% |
| ! | TTAATTAACCATTTGGGGTT+GGG | - | chr7_4:50310841-50310860 | Msa1160420:CDS | 30.0% |
| !!! | TATTACACGTGATTTTTTGC+AGG | - | chr7_4:50311193-50311212 | Msa1160420:intron | 30.0% |
| AGCTTATAGATCTTAGACAA+AGG | - | chr7_4:50311334-50311353 | Msa1160420:intron | 30.0% | |
| GCTTATAGATCTTAGACAAA+GGG | - | chr7_4:50311335-50311354 | Msa1160420:intron | 30.0% | |
| AAAGAAAATGGATCAACCTT+TGG | + | chr7_4:50311405-50311424 | None:intergenic | 30.0% | |
| TAAAATTATCAAGAGGTGGA+TGG | + | chr7_4:50311525-50311544 | None:intergenic | 30.0% | |
| !! | TCCACCTCTTGATAATTTTA+TGG | - | chr7_4:50311525-50311544 | Msa1160420:intron | 30.0% |
| TCCATAAAATTATCAAGAGG+TGG | + | chr7_4:50311529-50311548 | None:intergenic | 30.0% | |
| ! | CAATCTTTTCGCATTTTCTT+TGG | + | chr7_4:50311730-50311749 | None:intergenic | 30.0% |
| TGTGAATTCATGAATGTAGT+AGG | + | chr7_4:50311784-50311803 | None:intergenic | 30.0% | |
| ! | TGAGAATATTCTTTAGAGGT+TGG | + | chr7_4:50312060-50312079 | None:intergenic | 30.0% |
| AATTAACCAAGTGTGACAAA+TGG | - | chr7_4:50312082-50312101 | Msa1160420:CDS | 30.0% | |
| ATTAACCAAGTGTGACAAAT+GGG | - | chr7_4:50312083-50312102 | Msa1160420:CDS | 30.0% | |
| ! | AGAGGAAGTATATCGATAAT+GGG | + | chr7_4:50312111-50312130 | None:intergenic | 30.0% |
| ! | TAGAGGAAGTATATCGATAA+TGG | + | chr7_4:50312112-50312131 | None:intergenic | 30.0% |
| AACAAACTTTGTCAAAGTAG+AGG | + | chr7_4:50312129-50312148 | None:intergenic | 30.0% | |
| GAAATTGAAACATGGATACA+TGG | + | chr7_4:50312202-50312221 | None:intergenic | 30.0% | |
| ATGAAAGAACGTGAAATTTC+AGG | + | chr7_4:50312394-50312413 | None:intergenic | 30.0% | |
| TCTTTGTCTTTGATGTGACT+TGG | - | chr7_4:50307225-50307244 | Msa1160420:three_prime_UTR | 35.0% | |
| !! | TCTTTGATGTGACTTGGTTA+TGG | - | chr7_4:50307231-50307250 | Msa1160420:three_prime_UTR | 35.0% |
| TATATGCTATGAGCAATCCA+CGG | + | chr7_4:50307285-50307304 | None:intergenic | 35.0% | |
| !!! | TGCTTTTTCCTTTAGCAGTT+TGG | + | chr7_4:50307410-50307429 | None:intergenic | 35.0% |
| !! | TATCGACTTGTTCGAATTCA+AGG | + | chr7_4:50307449-50307468 | None:intergenic | 35.0% |
| AAGTCGATAGAGAAACCAAT+TGG | - | chr7_4:50307460-50307479 | Msa1160420:CDS | 35.0% | |
| TTTGATTGTGTGACATTTGC+AGG | - | chr7_4:50307579-50307598 | Msa1160420:intron | 35.0% | |
| TTGATTGTGTGACATTTGCA+GGG | - | chr7_4:50307580-50307599 | Msa1160420:intron | 35.0% | |
| AGGGTACATGATATTTCCTA+TGG | - | chr7_4:50307640-50307659 | Msa1160420:CDS | 35.0% | |
| CATGGTAAATTAGAAGCCAT+AGG | + | chr7_4:50307659-50307678 | None:intergenic | 35.0% | |
| CTATGGCTTCTAATTTACCA+TGG | - | chr7_4:50307657-50307676 | Msa1160420:CDS | 35.0% | |
| AAGTAAGAGAGGAGTTTCTT+AGG | + | chr7_4:50308558-50308577 | None:intergenic | 35.0% | |
| TCAAAATGGGAAAGTAAGAG+AGG | + | chr7_4:50308569-50308588 | None:intergenic | 35.0% | |
| ATGCTAATTTATTTGCTCCC+TGG | - | chr7_4:50308803-50308822 | Msa1160420:intron | 35.0% | |
| ATTGCATCACACCAAATTCA+GGG | - | chr7_4:50308844-50308863 | Msa1160420:intron | 35.0% | |
| TGAGTAATTAGCCCTGAATT+TGG | + | chr7_4:50308858-50308877 | None:intergenic | 35.0% | |
| TGTTCTCTATGCTTATGACT+TGG | - | chr7_4:50309101-50309120 | Msa1160420:intron | 35.0% | |
| ! | ATGCTTATGACTTGGATTTG+TGG | - | chr7_4:50309109-50309128 | Msa1160420:intron | 35.0% |
| ! | TGCTTATGACTTGGATTTGT+GGG | - | chr7_4:50309110-50309129 | Msa1160420:intron | 35.0% |
| !! | GGTGTTGCTTTCTAAAACAA+AGG | + | chr7_4:50309140-50309159 | None:intergenic | 35.0% |
| AAAACATAGACATGCCAACT+AGG | + | chr7_4:50309272-50309291 | None:intergenic | 35.0% | |
| ATTATGGAGGCTGAGTTAAA+TGG | - | chr7_4:50309466-50309485 | Msa1160420:intron | 35.0% | |
| ! | GATCAGATACAATGTTGACT+TGG | + | chr7_4:50309756-50309775 | None:intergenic | 35.0% |
| AGTCAACATTGTATCTGATC+AGG | - | chr7_4:50309756-50309775 | Msa1160420:intron | 35.0% | |
| CTTAAAATTGCTCACTTGGT+TGG | + | chr7_4:50309851-50309870 | None:intergenic | 35.0% | |
| ! | CAACCAAGTGAGCAATTTTA+AGG | - | chr7_4:50309849-50309868 | Msa1160420:intron | 35.0% |
| ACACCTTAAAATTGCTCACT+TGG | + | chr7_4:50309855-50309874 | None:intergenic | 35.0% | |
| TCATCAAAATCTTATGGGCT+AGG | - | chr7_4:50309886-50309905 | Msa1160420:intron | 35.0% | |
| !!! | AATGTTTTAACGTGTGTTGG+AGG | + | chr7_4:50310031-50310050 | None:intergenic | 35.0% |
| ATCGGATTCCATCATTCAAA+TGG | + | chr7_4:50310158-50310177 | None:intergenic | 35.0% | |
| !! | AGCACTTGATTTGTCTCTTT+AGG | + | chr7_4:50310457-50310476 | None:intergenic | 35.0% |
| ! | TCTGCATAAAGCATTAGCAA+TGG | + | chr7_4:50310512-50310531 | None:intergenic | 35.0% |
| ! | ATTTTGTTGACGCAATGCAT+AGG | + | chr7_4:50310595-50310614 | None:intergenic | 35.0% |
| ACAAGCTGAGATTCAAACTT+TGG | + | chr7_4:50310904-50310923 | None:intergenic | 35.0% | |
| GTCAGTAATAAGAAGGTTGA+TGG | + | chr7_4:50310941-50310960 | None:intergenic | 35.0% | |
| TTTGATAAATTGCAAGCAGG+TGG | - | chr7_4:50311293-50311312 | Msa1160420:intron | 35.0% | |
| TTCACCAATCAATACTCCAA+AGG | - | chr7_4:50311386-50311405 | Msa1160420:intron | 35.0% | |
| !! | TCAACCTTTGGAGTATTGAT+TGG | + | chr7_4:50311393-50311412 | None:intergenic | 35.0% |
| !! | CGGTCAAAGTTTTATGGATT+TGG | - | chr7_4:50311437-50311456 | Msa1160420:intron | 35.0% |
| ! | TATGGTTAGTTGGAGATGAA+TGG | - | chr7_4:50311641-50311660 | Msa1160420:CDS | 35.0% |
| ! | ATGGTTAGTTGGAGATGAAT+GGG | - | chr7_4:50311642-50311661 | Msa1160420:CDS | 35.0% |
| ATGGGATGAATATGAGCAAA+TGG | - | chr7_4:50311660-50311679 | Msa1160420:CDS | 35.0% | |
| GGTATGAACAATGATCCTTT+CGG | + | chr7_4:50311691-50311710 | None:intergenic | 35.0% | |
| TTTGGAGGGAAATGAGAAAA+TGG | + | chr7_4:50311712-50311731 | None:intergenic | 35.0% | |
| ! | CTTTTCGCATTTTCTTTGGA+GGG | + | chr7_4:50311726-50311745 | None:intergenic | 35.0% |
| ! | TCTTTTCGCATTTTCTTTGG+AGG | + | chr7_4:50311727-50311746 | None:intergenic | 35.0% |
| TAATCATTGCTGGTGTATAG+TGG | + | chr7_4:50311759-50311778 | None:intergenic | 35.0% | |
| GGAATAATTCATGCCTTAGA+AGG | - | chr7_4:50311959-50311978 | Msa1160420:CDS | 35.0% | |
| TAATTCATGCCTTAGAAGGA+TGG | - | chr7_4:50311963-50311982 | Msa1160420:CDS | 35.0% | |
| ATGAACATTCCATCCTTCTA+AGG | + | chr7_4:50311975-50311994 | None:intergenic | 35.0% | |
| AATGGTGTGTGTGATAAGTT+TGG | + | chr7_4:50312426-50312445 | None:intergenic | 35.0% | |
| CATAATATGGCTTCCAAACC+AGG | - | chr7_4:50306980-50306999 | Msa1160420:three_prime_UTR | 40.0% | |
| ATATGCTATGAGCAATCCAC+GGG | + | chr7_4:50307284-50307303 | None:intergenic | 40.0% | |
| ACTCTTTCATATGGGGTGAA+AGG | - | chr7_4:50307304-50307323 | Msa1160420:three_prime_UTR | 40.0% | |
| CTCTTTCATATGGGGTGAAA+GGG | - | chr7_4:50307305-50307324 | Msa1160420:three_prime_UTR | 40.0% | |
| GGAAATATAGCTTGGTACAC+TGG | + | chr7_4:50307333-50307352 | None:intergenic | 40.0% | |
| GAATGCTACACAACCAGATT+TGG | - | chr7_4:50307367-50307386 | Msa1160420:CDS | 40.0% | |
| TCACGTTACCAAACTGCTAA+AGG | - | chr7_4:50307399-50307418 | Msa1160420:CDS | 40.0% | |
| TGGCTTCTAATTTACCATGG+TGG | - | chr7_4:50307660-50307679 | Msa1160420:CDS | 40.0% | |
| CTTACAGCAATATTGCATGC+TGG | - | chr7_4:50307701-50307720 | Msa1160420:CDS | 40.0% | |
| GCTCAGTGACAATTGAAGAA+TGG | + | chr7_4:50307805-50307824 | None:intergenic | 40.0% | |
| TATGACAAATGCTCGGCAAA+TGG | + | chr7_4:50308405-50308424 | None:intergenic | 40.0% | |
| CATTGCATCACACCAAATTC+AGG | - | chr7_4:50308843-50308862 | Msa1160420:intron | 40.0% | |
| ! | AGCCTCATTGATTAGACCAA+AGG | - | chr7_4:50308943-50308962 | Msa1160420:CDS | 40.0% |
| CTCCTTTGGTCTAATCAATG+AGG | + | chr7_4:50308948-50308967 | None:intergenic | 40.0% | |
| CCATTTAGATGTTTGAGGGT+TGG | + | chr7_4:50309053-50309072 | None:intergenic | 40.0% | |
| CCAACCCTCAAACATCTAAA+TGG | - | chr7_4:50309050-50309069 | Msa1160420:CDS | 40.0% | |
| GGAGCAAAGGTGATAAGTTT+AGG | - | chr7_4:50309487-50309506 | Msa1160420:intron | 40.0% | |
| AGTGTTAGTTCATACTAGGC+TGG | - | chr7_4:50309593-50309612 | Msa1160420:intron | 40.0% | |
| !! | TGTTGACTTGGTGGTTTAGA+TGG | + | chr7_4:50309744-50309763 | None:intergenic | 40.0% |
| !! | CAGATACAATGTTGACTTGG+TGG | + | chr7_4:50309753-50309772 | None:intergenic | 40.0% |
| AAAAAACTAATAGGGCCCCA+AGG | + | chr7_4:50309917-50309936 | None:intergenic | 40.0% | |
| ACAAATCAAGTGCTTCTTCG+AGG | - | chr7_4:50310463-50310482 | Msa1160420:CDS | 40.0% | |
| TCTTCGAGGCAAGTTCAATA+AGG | - | chr7_4:50310477-50310496 | Msa1160420:CDS | 40.0% | |
| !! | GGGATACAACGTTGATTTGA+CGG | + | chr7_4:50310984-50311003 | None:intergenic | 40.0% |
| GCAGGTGGCTGTATTATATA+AGG | - | chr7_4:50311308-50311327 | Msa1160420:intron | 40.0% | |
| CATCATGTCGAAAGAAAGCT+TGG | - | chr7_4:50311359-50311378 | Msa1160420:intron | 40.0% | |
| TGGATGGTGTGTTTAATGGT+GGG | + | chr7_4:50311509-50311528 | None:intergenic | 40.0% | |
| GTAGTAGGAGTAATCATTGC+TGG | + | chr7_4:50311769-50311788 | None:intergenic | 40.0% | |
| CATGAATTCACACTCTTGTG+AGG | - | chr7_4:50311792-50311811 | Msa1160420:CDS | 40.0% | |
| CATGCACTCATTACTCTTCT+TGG | + | chr7_4:50311929-50311948 | None:intergenic | 40.0% | |
| CAAGAAGAGTAATGAGTGCA+TGG | - | chr7_4:50311927-50311946 | Msa1160420:intron | 40.0% | |
| GGATGGAATGTTCATGAATG+TGG | - | chr7_4:50311980-50311999 | Msa1160420:CDS | 40.0% | |
| ! | TGCTTAGCACTGAGAAAGTA+TGG | - | chr7_4:50312011-50312030 | Msa1160420:CDS | 40.0% |
| ! | GCTTAGCACTGAGAAAGTAT+GGG | - | chr7_4:50312012-50312031 | Msa1160420:CDS | 40.0% |
| TGGGAAGCAAGTATTCTTCA+TGG | - | chr7_4:50312031-50312050 | Msa1160420:CDS | 40.0% | |
| ! | TTACCATGGTGGAGAACAGA+TGG | - | chr7_4:50307671-50307690 | Msa1160420:CDS | 45.0% |
| AATATTGCATGCTGGACCAG+TGG | - | chr7_4:50307709-50307728 | Msa1160420:CDS | 45.0% | |
| TCTTCAGTGGCTGCACTATA+TGG | - | chr7_4:50308474-50308493 | Msa1160420:intron | 45.0% | |
| GATGCAATGAGTGAAACCTG+TGG | + | chr7_4:50308832-50308851 | None:intergenic | 45.0% | |
| GGCTTCATATGTAGCATCTG+TGG | + | chr7_4:50308927-50308946 | None:intergenic | 45.0% | |
| TGTGTTAAGTGCACCACATC+TGG | + | chr7_4:50308974-50308993 | None:intergenic | 45.0% | |
| ! | TGGCATGTCTATGTTTTCCC+TGG | - | chr7_4:50309275-50309294 | Msa1160420:intron | 45.0% |
| AAGAGAAGGACATGCATCCA+GGG | + | chr7_4:50309295-50309314 | None:intergenic | 45.0% | |
| GGCTGAGTTAAATGGAGCAA+AGG | - | chr7_4:50309474-50309493 | Msa1160420:intron | 45.0% | |
| !! | CAAAATCTTATGGGCTAGGC+TGG | - | chr7_4:50309890-50309909 | Msa1160420:intron | 45.0% |
| ! | GTGTGTTGGAGGTTTTTACG+AGG | + | chr7_4:50310020-50310039 | None:intergenic | 45.0% |
| AGGGCATGCGAGAAATTCAT+AGG | - | chr7_4:50310071-50310090 | Msa1160420:intron | 45.0% | |
| GGGCATGCGAGAAATTCATA+GGG | - | chr7_4:50310072-50310091 | Msa1160420:intron | 45.0% | |
| TGTACAGGTATGTGCAAGCA+TGG | - | chr7_4:50310537-50310556 | Msa1160420:CDS | 45.0% | |
| !! | CGTTGATTTGACGGCTAGAA+TGG | + | chr7_4:50310975-50310994 | None:intergenic | 45.0% |
| GGATGGTGTGTTTAATGGTG+GGG | + | chr7_4:50311508-50311527 | None:intergenic | 45.0% | |
| GTGGATGGTGTGTTTAATGG+TGG | + | chr7_4:50311510-50311529 | None:intergenic | 45.0% | |
| GAGGTGGATGGTGTGTTTAA+TGG | + | chr7_4:50311513-50311532 | None:intergenic | 45.0% | |
| TCATTGCTGGTGTATAGTGG+TGG | + | chr7_4:50311756-50311775 | None:intergenic | 45.0% | |
| !! | ATTAAAAAAAAAAACTAATA+GGG | + | chr7_4:50309925-50309944 | None:intergenic | 5.0% |
| !! | TATTAAAAAAAAAAACTAAT+AGG | + | chr7_4:50309926-50309945 | None:intergenic | 5.0% |
| !!! | TTTTTAAAAATAAAAGAAAA+TGG | + | chr7_4:50311417-50311436 | None:intergenic | 5.0% |
| !!! | TTTTCTTTTATTTTTAAAAA+CGG | - | chr7_4:50311417-50311436 | Msa1160420:intron | 5.0% |
| !!! | ATTTTAATTTATGTTATAAT+AGG | + | chr7_4:50311856-50311875 | None:intergenic | 5.0% |
| GTCTGTAAGGATGCCTGGTT+TGG | + | chr7_4:50306996-50307015 | None:intergenic | 50.0% | |
| AACCAGGCATCCTTACAGAC+TGG | - | chr7_4:50306996-50307015 | Msa1160420:three_prime_UTR | 50.0% | |
| GTTTCCAAGGCCAGTCTGTA+AGG | + | chr7_4:50307009-50307028 | None:intergenic | 50.0% | |
| AGTTCGTGATTCTAAGCCCG+TGG | - | chr7_4:50307265-50307284 | Msa1160420:three_prime_UTR | 50.0% | |
| ACACCATCTGTTCTCCACCA+TGG | + | chr7_4:50307677-50307696 | None:intergenic | 50.0% | |
| ! | ATGGTGGAGAACAGATGGTG+TGG | - | chr7_4:50307676-50307695 | Msa1160420:CDS | 50.0% |
| AGTGAAACCTGTGGATGCCA+GGG | + | chr7_4:50308823-50308842 | None:intergenic | 50.0% | |
| ACCAAAGGAGTCACCAGATG+TGG | - | chr7_4:50308958-50308977 | Msa1160420:CDS | 50.0% | |
| ACCACATCTGGTGACTCCTT+TGG | + | chr7_4:50308962-50308981 | None:intergenic | 50.0% | |
| CGCAAAAGTGACGACCTAGT+TGG | - | chr7_4:50309255-50309274 | Msa1160420:intron | 50.0% | |
| CAAGAGAAGGACATGCATCC+AGG | + | chr7_4:50309296-50309315 | None:intergenic | 50.0% | |
| CCATGAAACCCAACCCCAAA+TGG | + | chr7_4:50310852-50310871 | None:intergenic | 50.0% | |
| ! | CCATTTGGGGTTGGGTTTCA+TGG | - | chr7_4:50310849-50310868 | Msa1160420:CDS | 50.0% |
| !! | GAGCAAATGGAAGCACCGAA+AGG | - | chr7_4:50311673-50311692 | Msa1160420:CDS | 50.0% |
| GGGAACCCATTTGTCACACT+TGG | + | chr7_4:50312091-50312110 | None:intergenic | 50.0% | |
| !! | GCATCCTTACAGACTGGCCT+TGG | - | chr7_4:50307002-50307021 | Msa1160420:three_prime_UTR | 55.0% |
| !! | AGACTGGCCTTGGAAACCTC+TGG | - | chr7_4:50307012-50307031 | Msa1160420:three_prime_UTR | 55.0% |
| !! | GACTGGCCTTGGAAACCTCT+GGG | - | chr7_4:50307013-50307032 | Msa1160420:three_prime_UTR | 55.0% |
| !! | ACTGGCCTTGGAAACCTCTG+GGG | - | chr7_4:50307014-50307033 | Msa1160420:three_prime_UTR | 55.0% |
| AAGCTCCCCAGAGGTTTCCA+AGG | + | chr7_4:50307022-50307041 | None:intergenic | 55.0% | |
| ! | GAAACCTCTGGGGAGCTTCA+AGG | - | chr7_4:50307024-50307043 | Msa1160420:three_prime_UTR | 55.0% |
| AGAACCTTGAAGCTCCCCAG+AGG | + | chr7_4:50307031-50307050 | None:intergenic | 55.0% | |
| ATTTGCTCCCTGGCATCCAC+AGG | - | chr7_4:50308813-50308832 | Msa1160420:intron | 55.0% | |
| GAGTGAAACCTGTGGATGCC+AGG | + | chr7_4:50308824-50308843 | None:intergenic | 55.0% | |
| !! | TTATGGGCTAGGCTGGACCT+TGG | - | chr7_4:50309897-50309916 | Msa1160420:intron | 55.0% |
| !! | TATGGGCTAGGCTGGACCTT+GGG | - | chr7_4:50309898-50309917 | Msa1160420:intron | 55.0% |
| TCAACACGGTTGCAGCAGCT+AGG | + | chr7_4:50310426-50310445 | None:intergenic | 55.0% | |
| GGCCAGTCTGTAAGGATGCC+TGG | + | chr7_4:50307001-50307020 | None:intergenic | 60.0% | |
| !! | ATGGGCTAGGCTGGACCTTG+GGG | - | chr7_4:50309899-50309918 | Msa1160420:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 50306956 | 50312467 | 50306956 | ID=Msa1160420;Name=Msa1160420 |
| chr7_4 | mRNA | 50306956 | 50312467 | 50306956 | ID=Msa1160420-mRNA-1;Parent=Msa1160420;Name=Msa1160420-mRNA-1;_AED=0.36;_eAED=0.36;_QI=30|1|1|1|1|1|10|380|617 |
| chr7_4 | exon | 50306956 | 50307506 | 50306956 | ID=Msa1160420-mRNA-1:exon:14002;Parent=Msa1160420-mRNA-1 |
| chr7_4 | exon | 50307610 | 50307783 | 50307610 | ID=Msa1160420-mRNA-1:exon:14001;Parent=Msa1160420-mRNA-1 |
| chr7_4 | exon | 50308016 | 50308111 | 50308016 | ID=Msa1160420-mRNA-1:exon:14000;Parent=Msa1160420-mRNA-1 |
| chr7_4 | exon | 50308880 | 50309080 | 50308880 | ID=Msa1160420-mRNA-1:exon:13999;Parent=Msa1160420-mRNA-1 |
| chr7_4 | exon | 50309901 | 50310008 | 50309901 | ID=Msa1160420-mRNA-1:exon:13998;Parent=Msa1160420-mRNA-1 |
| chr7_4 | exon | 50310213 | 50310588 | 50310213 | ID=Msa1160420-mRNA-1:exon:13997;Parent=Msa1160420-mRNA-1 |
| chr7_4 | exon | 50310813 | 50311032 | 50310813 | ID=Msa1160420-mRNA-1:exon:13996;Parent=Msa1160420-mRNA-1 |
| chr7_4 | exon | 50311590 | 50311822 | 50311590 | ID=Msa1160420-mRNA-1:exon:13995;Parent=Msa1160420-mRNA-1 |
| chr7_4 | exon | 50311942 | 50312156 | 50311942 | ID=Msa1160420-mRNA-1:exon:13994;Parent=Msa1160420-mRNA-1 |
| chr7_4 | exon | 50312378 | 50312467 | 50312378 | ID=Msa1160420-mRNA-1:exon:13993;Parent=Msa1160420-mRNA-1 |
| chr7_4 | five_prime_UTR | 50312438 | 50312467 | 50312438 | ID=Msa1160420-mRNA-1:five_prime_utr;Parent=Msa1160420-mRNA-1 |
| chr7_4 | CDS | 50312378 | 50312437 | 50312378 | ID=Msa1160420-mRNA-1:cds;Parent=Msa1160420-mRNA-1 |
| chr7_4 | CDS | 50311942 | 50312156 | 50311942 | ID=Msa1160420-mRNA-1:cds;Parent=Msa1160420-mRNA-1 |
| chr7_4 | CDS | 50311590 | 50311822 | 50311590 | ID=Msa1160420-mRNA-1:cds;Parent=Msa1160420-mRNA-1 |
| chr7_4 | CDS | 50310813 | 50311032 | 50310813 | ID=Msa1160420-mRNA-1:cds;Parent=Msa1160420-mRNA-1 |
| chr7_4 | CDS | 50310213 | 50310588 | 50310213 | ID=Msa1160420-mRNA-1:cds;Parent=Msa1160420-mRNA-1 |
| chr7_4 | CDS | 50309901 | 50310008 | 50309901 | ID=Msa1160420-mRNA-1:cds;Parent=Msa1160420-mRNA-1 |
| chr7_4 | CDS | 50308880 | 50309080 | 50308880 | ID=Msa1160420-mRNA-1:cds;Parent=Msa1160420-mRNA-1 |
| chr7_4 | CDS | 50308016 | 50308111 | 50308016 | ID=Msa1160420-mRNA-1:cds;Parent=Msa1160420-mRNA-1 |
| chr7_4 | CDS | 50307610 | 50307783 | 50307610 | ID=Msa1160420-mRNA-1:cds;Parent=Msa1160420-mRNA-1 |
| chr7_4 | CDS | 50307336 | 50307506 | 50307336 | ID=Msa1160420-mRNA-1:cds;Parent=Msa1160420-mRNA-1 |
| chr7_4 | three_prime_UTR | 50306956 | 50307335 | 50306956 | ID=Msa1160420-mRNA-1:three_prime_utr;Parent=Msa1160420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
