Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074940 | XP_003625192.1 | 98.028 | 710 | 14 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074940 | A2Q3E1 | 98.028 | 710 | 14 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1436 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1034900 | Msa1074940 | 0.981466 | 1.172541e-152 | -8.615850e-47 |
| Msa1074940 | Msa1115790 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
| Msa1074940 | Msa1162300 | 0.931001 | 7.193287e-94 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074940 | MtrunA17_Chr7g0258101 | 98.028 | 710 | 14 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1436 |
| Msa1074940 | MtrunA17_Chr7g0225961 | 51.636 | 550 | 230 | 12 | 177 | 708 | 447 | 978 | 1.66e-176 | 530 |
| Msa1074940 | MtrunA17_Chr6g0459211 | 49.129 | 574 | 251 | 10 | 153 | 708 | 345 | 895 | 5.63e-169 | 508 |
| Msa1074940 | MtrunA17_Chr1g0187521 | 42.468 | 697 | 332 | 17 | 22 | 708 | 353 | 990 | 1.65e-160 | 489 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074940 | AT2G42320.2 | 62.148 | 568 | 176 | 9 | 142 | 708 | 139 | 668 | 0.0 | 728 |
| Msa1074940 | AT2G42320.1 | 62.148 | 568 | 176 | 9 | 142 | 708 | 139 | 668 | 0.0 | 728 |
| Msa1074940 | AT3G57780.4 | 58.913 | 589 | 208 | 9 | 123 | 710 | 116 | 671 | 0.0 | 678 |
| Msa1074940 | AT3G57780.1 | 58.913 | 589 | 208 | 9 | 123 | 710 | 116 | 671 | 0.0 | 678 |
| Msa1074940 | AT3G57780.2 | 58.913 | 589 | 208 | 9 | 123 | 710 | 116 | 671 | 0.0 | 678 |
| Msa1074940 | AT3G57780.3 | 58.913 | 589 | 208 | 9 | 123 | 710 | 116 | 671 | 0.0 | 678 |
| Msa1074940 | AT3G57780.5 | 57.848 | 446 | 162 | 6 | 123 | 568 | 116 | 535 | 5.51e-174 | 508 |
| Msa1074940 | AT5G06930.2 | 43.966 | 696 | 309 | 12 | 17 | 706 | 102 | 722 | 4.08e-169 | 503 |
| Msa1074940 | AT5G06930.3 | 43.966 | 696 | 309 | 12 | 17 | 706 | 102 | 722 | 4.08e-169 | 503 |
| Msa1074940 | AT5G06930.1 | 43.966 | 696 | 309 | 12 | 17 | 706 | 102 | 722 | 4.08e-169 | 503 |
| Msa1074940 | AT3G01810.1 | 50.457 | 547 | 223 | 11 | 178 | 708 | 403 | 917 | 3.07e-167 | 504 |
| Msa1074940 | AT3G01810.3 | 50.457 | 547 | 223 | 11 | 178 | 708 | 403 | 917 | 3.07e-167 | 504 |
| Msa1074940 | AT3G01810.2 | 50.457 | 547 | 223 | 11 | 178 | 708 | 403 | 917 | 3.07e-167 | 504 |
| Msa1074940 | AT2G42320.4 | 64.205 | 352 | 112 | 3 | 142 | 493 | 139 | 476 | 6.24e-165 | 484 |
| Msa1074940 | AT2G42320.3 | 64.205 | 352 | 112 | 3 | 142 | 493 | 139 | 476 | 6.24e-165 | 484 |
| Msa1074940 | AT5G43230.1 | 46.154 | 533 | 230 | 12 | 182 | 708 | 361 | 842 | 1.12e-146 | 449 |
Find 196 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGATTCAGGTTAACTTTC+TGG | 0.107816 | 7_2:-73015907 | Msa1074940:intron |
| AAAATGAATGTCAGGAATTT+AGG | 0.196472 | 7_2:-73013539 | Msa1074940:three_prime_UTR |
| TACTGTTTCTGGCCTTATTT+TGG | 0.209652 | 7_2:-73016047 | Msa1074940:CDS |
| TCAGTCTTTCATTGATTATA+CGG | 0.219799 | 7_2:-73014304 | Msa1074940:CDS |
| AATAAACAGACAAGATATTT+TGG | 0.219821 | 7_2:-73013485 | Msa1074940:three_prime_UTR |
| ATTGCCAAGAATACTGTTTC+TGG | 0.221335 | 7_2:-73016058 | Msa1074940:CDS |
| TTCTGTCCTGACGCGGTTCC+AGG | 0.227836 | 7_2:-73014254 | Msa1074940:CDS |
| CACCTGCGCGGCGCCTTTCT+AGG | 0.229152 | 7_2:-73016129 | Msa1074940:CDS |
| CCATTTCCTGATTTACCATT+TGG | 0.275012 | 7_2:+73015737 | None:intergenic |
| ACAACTGGAGCCGCGCTATA+AGG | 0.276595 | 7_2:+73013884 | None:intergenic |
| TTATTAAGGATGATGGATTT+AGG | 0.287768 | 7_2:-73013202 | Msa1074940:three_prime_UTR |
| TGATAATCACTCCACTGATT+TGG | 0.300525 | 7_2:-73016773 | Msa1074940:CDS |
| GAGATAATTTCACAAGCATT+TGG | 0.301700 | 7_2:-73015860 | Msa1074940:CDS |
| CCATGATTCGACTCTTTCTA+AGG | 0.303020 | 7_2:+73015664 | None:intergenic |
| TCATCGATATATGCTTATTA+AGG | 0.303343 | 7_2:-73013216 | Msa1074940:three_prime_UTR |
| TTCATTACTAGGGAAAATTA+AGG | 0.307623 | 7_2:-73013457 | Msa1074940:three_prime_UTR |
| ATGATTTAGCAACCAAAATA+AGG | 0.316584 | 7_2:+73016035 | None:intergenic |
| CCAACCGAAGATTGCATATA+AGG | 0.317885 | 7_2:+73015410 | None:intergenic |
| GGTTAAGGAAATTGAAATCT+TGG | 0.322169 | 7_2:-73016383 | Msa1074940:CDS |
| ATCAACTACTTCGTGAAGTT+TGG | 0.328969 | 7_2:-73013619 | Msa1074940:CDS |
| ATTCTTTAATGCTACTCTTA+AGG | 0.333131 | 7_2:+73013393 | None:intergenic |
| CCCGCAGGAAACTTAAGCTT+TGG | 0.334169 | 7_2:-73014980 | Msa1074940:CDS |
| TCACAAGCATTTGGGAATTC+CGG | 0.335945 | 7_2:-73015851 | Msa1074940:CDS |
| ATTTCCTTAACCTCTATAAC+AGG | 0.338096 | 7_2:+73016394 | None:intergenic |
| CCCAACAGATTTATTTGAAC+AGG | 0.344331 | 7_2:+73015382 | None:intergenic |
| TCCACAATTGGATCTGATAT+TGG | 0.346515 | 7_2:+73015022 | None:intergenic |
| CGCGGTTCCAGGAGCTGTCT+TGG | 0.351188 | 7_2:-73014243 | Msa1074940:CDS |
| AAGGCCAGAAACAGTATTCT+TGG | 0.354379 | 7_2:+73016054 | None:intergenic |
| CGATGTTCAATGCAATTCTT+CGG | 0.364445 | 7_2:-73015072 | Msa1074940:CDS |
| GCTCCCAAAAGACATGCTTA+TGG | 0.367269 | 7_2:-73014450 | Msa1074940:CDS |
| CTATCCATAAGCATGTCTTT+TGG | 0.368140 | 7_2:+73014446 | None:intergenic |
| GGTATCCCAAATGGTAAATC+AGG | 0.370404 | 7_2:-73015743 | Msa1074940:CDS |
| AAAACCTGTTATAGAGGTTA+AGG | 0.378511 | 7_2:-73016398 | Msa1074940:CDS |
| TGACCCAGCCAACCTCATAA+TGG | 0.379222 | 7_2:+73015817 | None:intergenic |
| ATGAGGTTGGCTGGGTCAAA+TGG | 0.379911 | 7_2:-73015812 | Msa1074940:CDS |
| CATTTCCTGATTTACCATTT+GGG | 0.383540 | 7_2:+73015738 | None:intergenic |
| TTCACGAAGTAGTTGATATC+TGG | 0.384114 | 7_2:+73013625 | None:intergenic |
| GATGTTCAATGCAATTCTTC+GGG | 0.387788 | 7_2:-73015071 | Msa1074940:CDS |
| AGTCCCATTATGAGGTTGGC+TGG | 0.390091 | 7_2:-73015821 | Msa1074940:CDS |
| ATGATGGATTTAGGAATTCA+TGG | 0.392575 | 7_2:-73013193 | Msa1074940:three_prime_UTR |
| AGATAATTTCACAAGCATTT+GGG | 0.392815 | 7_2:-73015859 | Msa1074940:CDS |
| GACTCCTTATATGCAATCTT+CGG | 0.394851 | 7_2:-73015414 | Msa1074940:CDS |
| TAAGGCAAACGTAAAGGTTC+CGG | 0.395508 | 7_2:+73015682 | None:intergenic |
| TCGTCGTTCTCACTGTTCTC+TGG | 0.395693 | 7_2:+73014539 | None:intergenic |
| CAAGCATACCTCTCCGTTCA+AGG | 0.396892 | 7_2:+73014217 | None:intergenic |
| CTTATATGCAATCTTCGGTT+GGG | 0.397784 | 7_2:-73015409 | Msa1074940:CDS |
| AGTTCCTGCAAAAGTTTCTT+CGG | 0.400597 | 7_2:-73016443 | Msa1074940:CDS |
| GCTTTCATCTATCATTGATA+AGG | 0.400694 | 7_2:-73013723 | Msa1074940:CDS |
| CTCTGCCACATTGGCTGACG+AGG | 0.405100 | 7_2:+73013850 | None:intergenic |
| CAACTGGAGCCGCGCTATAA+GGG | 0.408164 | 7_2:+73013885 | None:intergenic |
| GGAAGTCTGCATCACTGAAA+TGG | 0.412726 | 7_2:-73015769 | Msa1074940:CDS |
| TATATGCTTATTAAGGATGA+TGG | 0.415256 | 7_2:-73013209 | Msa1074940:three_prime_UTR |
| GACCCAGCCAACCTCATAAT+GGG | 0.418748 | 7_2:+73015818 | None:intergenic |
| AAACTGCAATCAAAGGTAAC+AGG | 0.421068 | 7_2:-73016553 | Msa1074940:CDS |
| GATTTAGGAATTCATGGCCT+TGG | 0.422108 | 7_2:-73013187 | Msa1074940:three_prime_UTR |
| CCAAATGGTAAATCAGGAAA+TGG | 0.422555 | 7_2:-73015737 | Msa1074940:CDS |
| AACTTTCACTGGCTTAGTAT+TGG | 0.428733 | 7_2:+73016462 | None:intergenic |
| CTTAAGTTTCCTGCGGGAAT+CGG | 0.429998 | 7_2:+73014986 | None:intergenic |
| TTGAACTGCAGGTTGGCAAT+TGG | 0.431617 | 7_2:-73014619 | Msa1074940:intron |
| AGAGTCTTTGAAAAGCATCT+TGG | 0.438876 | 7_2:+73015288 | None:intergenic |
| TTATGCAGACCGGTGAAGAT+TGG | 0.439100 | 7_2:-73015712 | Msa1074940:CDS |
| ATCTTGGATGGATCTTCTAA+TGG | 0.439235 | 7_2:-73016367 | Msa1074940:CDS |
| CCTTAGAAAGAGTCGAATCA+TGG | 0.440461 | 7_2:-73015664 | Msa1074940:CDS |
| AAAACCTTTGAATCCACAAT+TGG | 0.442116 | 7_2:+73015010 | None:intergenic |
| GGATCTGATATTGGATCAGT+TGG | 0.442351 | 7_2:+73015031 | None:intergenic |
| AGATTGCTCACTGATATGTT+TGG | 0.443061 | 7_2:-73014593 | Msa1074940:CDS |
| TCCTGTTCAAATAAATCTGT+TGG | 0.444730 | 7_2:-73015383 | Msa1074940:CDS |
| AAGGCCTCCAAGACAGCTCC+TGG | 0.449202 | 7_2:+73014236 | None:intergenic |
| GAAAATCTAGTTACATTATG+TGG | 0.454760 | 7_2:-73016851 | Msa1074940:five_prime_UTR |
| CATTGATGCTGAAGATTGTT+CGG | 0.456507 | 7_2:-73014570 | Msa1074940:CDS |
| AGCGTTTCTCCAGAGATTGA+TGG | 0.459672 | 7_2:+73015313 | None:intergenic |
| ACAGCTCCTGGAACCGCGTC+AGG | 0.460610 | 7_2:+73014248 | None:intergenic |
| GTAGCGACTGTTGGAGATGA+AGG | 0.463021 | 7_2:+73013698 | None:intergenic |
| AAATCTATAAACTCAAATAA+AGG | 0.465368 | 7_2:-73016517 | Msa1074940:CDS |
| CAGTCTTTCATTGATTATAC+GGG | 0.471953 | 7_2:-73014303 | Msa1074940:CDS |
| CATCTTGACAAGTGCCTCCT+CGG | 0.474427 | 7_2:+73016813 | None:intergenic |
| TCTCCAACAGTCGCTACAAA+TGG | 0.474955 | 7_2:-73013692 | Msa1074940:CDS |
| GAAGGTCACTCAAGTCGTTA+AGG | 0.475334 | 7_2:+73014477 | None:intergenic |
| CAGCCGATACATTCCTTGTC+AGG | 0.475846 | 7_2:+73013798 | None:intergenic |
| GGTCTCTTGCCAATCTTCAC+CGG | 0.476305 | 7_2:+73015703 | None:intergenic |
| GCTATAAGGGAAGCTTCTAA+TGG | 0.478309 | 7_2:+73013898 | None:intergenic |
| TTTGGAATTCTTCATTACTA+GGG | 0.478393 | 7_2:-73013467 | Msa1074940:three_prime_UTR |
| GGGTCTGCCAAGAGGAATGA+TGG | 0.478703 | 7_2:-73015791 | Msa1074940:CDS |
| CCTGTTCAAATAAATCTGTT+GGG | 0.479247 | 7_2:-73015382 | Msa1074940:CDS |
| ATTTCATCCTTAGACTATTG+TGG | 0.482559 | 7_2:-73013942 | Msa1074940:intron |
| TTTCCATTTGTAGCGACTGT+TGG | 0.485899 | 7_2:+73013689 | None:intergenic |
| AGCCTAGAAAGGCGCCGCGC+AGG | 0.486438 | 7_2:+73016127 | None:intergenic |
| ACAGTCGCTACAAATGGAAA+TGG | 0.487763 | 7_2:-73013686 | Msa1074940:CDS |
| CCTTATATGCAATCTTCGGT+TGG | 0.490349 | 7_2:-73015410 | Msa1074940:CDS |
| GCAGAGAAAGTTGCAGAGGC+AGG | 0.490544 | 7_2:-73013833 | Msa1074940:CDS |
| TAGAAAGCAATCGTGGATCA+AGG | 0.491210 | 7_2:-73016600 | Msa1074940:CDS |
| AGGTGAGGATGGTGCGGCTA+TGG | 0.492044 | 7_2:-73016281 | Msa1074940:CDS |
| ATATACATGCTTGTAAGCAT+TGG | 0.492208 | 7_2:-73016102 | Msa1074940:CDS |
| GGTTCCAGGAGCTGTCTTGG+AGG | 0.494180 | 7_2:-73014240 | Msa1074940:CDS |
| AAGGAAATTGAAATCTTGGA+TGG | 0.494656 | 7_2:-73016379 | Msa1074940:CDS |
| AAATCTGTTGGGAGGCTGCT+AGG | 0.495687 | 7_2:-73015371 | Msa1074940:CDS |
| GAGGGAGGCATATACACAAC+TGG | 0.497820 | 7_2:+73013869 | None:intergenic |
| CTTGCCTGTGATGGCAAGAA+TGG | 0.499265 | 7_2:-73015231 | Msa1074940:intron |
| GAAACGTTTCCATCAATCTC+TGG | 0.499824 | 7_2:-73015322 | Msa1074940:CDS |
| CTCTGTCCTCTTCGAGCAGG+AGG | 0.499854 | 7_2:-73015269 | Msa1074940:CDS |
| AGATCCAATTGTGGATTCAA+AGG | 0.501615 | 7_2:-73015014 | Msa1074940:CDS |
| AAATGGAAAGGTATCCCAAA+TGG | 0.503103 | 7_2:-73015752 | Msa1074940:CDS |
| TTGAGATGATAATGAATCCT+TGG | 0.504553 | 7_2:+73016702 | None:intergenic |
| ATTATGTGGATGATGTCAAC+AGG | 0.504980 | 7_2:-73016837 | Msa1074940:five_prime_UTR |
| AGTAGAGTCGGTGTGGTGGC+AGG | 0.505247 | 7_2:-73015627 | Msa1074940:intron |
| CATGCGGTAATGATGTTTCA+AGG | 0.509862 | 7_2:-73016015 | Msa1074940:intron |
| GTAAGCATTGGACCCCGAAA+AGG | 0.511380 | 7_2:-73016090 | Msa1074940:CDS |
| TTGCTCTTTCTCCAAATCAG+TGG | 0.511690 | 7_2:+73016762 | None:intergenic |
| GGAAACTTAAGCTTTGGATC+TGG | 0.513114 | 7_2:-73014974 | Msa1074940:CDS |
| TGTGCTGAGCTACCATGCTC+TGG | 0.514422 | 7_2:+73016163 | None:intergenic |
| TTATATGCAATCTTCGGTTG+GGG | 0.517244 | 7_2:-73015408 | Msa1074940:CDS |
| AGACTTCCCATCATTCCTCT+TGG | 0.520311 | 7_2:+73015784 | None:intergenic |
| TGAGGTTGGCTGGGTCAAAT+GGG | 0.521117 | 7_2:-73015811 | Msa1074940:CDS |
| GTCCCATTATGAGGTTGGCT+GGG | 0.521850 | 7_2:-73015820 | Msa1074940:CDS |
| AACAAATAAACTGCAATCAA+AGG | 0.522793 | 7_2:-73016560 | Msa1074940:CDS |
| TTCACAAGTTTCACATCACA+TGG | 0.525118 | 7_2:+73013595 | None:intergenic |
| GTTTCTTCGGAATCTTCTGA+AGG | 0.525949 | 7_2:-73016430 | Msa1074940:CDS |
| GTCAAGTCAGTCCCATTATG+AGG | 0.532212 | 7_2:-73015829 | Msa1074940:CDS |
| TTATCAAACAAACATGAAGA+AGG | 0.532376 | 7_2:+73013351 | None:intergenic |
| TGCAACTTTCTCTGCCACAT+TGG | 0.532567 | 7_2:+73013841 | None:intergenic |
| TCTTTCTAAGGCAAACGTAA+AGG | 0.535183 | 7_2:+73015676 | None:intergenic |
| TAGTTGATATCTGGCATTTG+TGG | 0.536534 | 7_2:+73013634 | None:intergenic |
| AGGCTGCTAGGACCTGCTCT+AGG | 0.537769 | 7_2:-73015359 | Msa1074940:CDS |
| AGACTCTGTCCTCTTCGAGC+AGG | 0.539604 | 7_2:-73015272 | Msa1074940:CDS |
| GTGTGGTTGCTTGCCTGTGA+TGG | 0.539654 | 7_2:-73015240 | Msa1074940:CDS |
| CATAATGGGACTGACTTGAC+CGG | 0.541186 | 7_2:+73015832 | None:intergenic |
| TATAATCAATGAAAGACTGA+TGG | 0.542526 | 7_2:+73014307 | None:intergenic |
| CCAAAGCTTAAGTTTCCTGC+GGG | 0.543212 | 7_2:+73014980 | None:intergenic |
| ATTGTTAATGCTGAAGAAAA+CGG | 0.544073 | 7_2:-73016307 | Msa1074940:CDS |
| TTGATATCTGGCATTTGTGG+TGG | 0.552983 | 7_2:+73013637 | None:intergenic |
| GCGTCAGGACAGAACTCATC+CGG | 0.556096 | 7_2:+73014263 | None:intergenic |
| CATACCATTCTTGCCATCAC+AGG | 0.556346 | 7_2:+73015227 | None:intergenic |
| AATTCTTCGGGAATCAGCCT+TGG | 0.558985 | 7_2:-73015059 | Msa1074940:CDS |
| GATCTGATATTGGATCAGTT+GGG | 0.559567 | 7_2:+73015032 | None:intergenic |
| GGTGAAGATTGGCAAGAGAC+CGG | 0.563020 | 7_2:-73015701 | Msa1074940:CDS |
| GCATCAGAATACGACATTGG+AGG | 0.563961 | 7_2:-73013259 | Msa1074940:three_prime_UTR |
| CATGTATATAGAGCCTAGAA+AGG | 0.566272 | 7_2:+73016116 | None:intergenic |
| GCTGTCTTGGAGGCCTTGAA+CGG | 0.568733 | 7_2:-73014230 | Msa1074940:CDS |
| TATTCTATTGTACCAGAGCA+TGG | 0.572688 | 7_2:-73016175 | Msa1074940:CDS |
| ACGAATTGAAAATCTTGAAG+AGG | 0.573568 | 7_2:-73016233 | Msa1074940:CDS |
| GAGGAAAGTGTCACCTGACA+AGG | 0.576148 | 7_2:-73013811 | Msa1074940:CDS |
| GCTCTAGGTGATCACAATCA+AGG | 0.578230 | 7_2:-73015344 | Msa1074940:CDS |
| AGTCAGTCCCATTATGAGGT+TGG | 0.581356 | 7_2:-73015825 | Msa1074940:CDS |
| ATCAATGAAAGACTGATGGA+TGG | 0.583203 | 7_2:+73014311 | None:intergenic |
| AAGGATTCATTATCATCTCA+AGG | 0.584015 | 7_2:-73016700 | Msa1074940:CDS |
| GCCACATTGGCTGACGAGGG+AGG | 0.584527 | 7_2:+73013854 | None:intergenic |
| TGATTGTGATCACCTAGAGC+AGG | 0.586194 | 7_2:+73015347 | None:intergenic |
| AGAACAGTGAGAACGACGAA+AGG | 0.586884 | 7_2:-73014535 | Msa1074940:CDS |
| AGAAAGCAATCGTGGATCAA+GGG | 0.587886 | 7_2:-73016599 | Msa1074940:CDS |
| TATGGATAGACAAGTCAGCC+AGG | 0.590801 | 7_2:-73014432 | Msa1074940:CDS |
| GGCTAGTAGAGTCGGTGTGG+TGG | 0.590826 | 7_2:-73015631 | Msa1074940:CDS |
| AATGGTAATCACAAAGAGCA+AGG | 0.592592 | 7_2:-73013668 | Msa1074940:CDS |
| TGTGGCAGAGAAAGTTGCAG+AGG | 0.593717 | 7_2:-73013837 | Msa1074940:CDS |
| CGAGCAGGAGGGCACGAGTG+TGG | 0.595415 | 7_2:-73015257 | Msa1074940:CDS |
| TCTAATGGCGCTCAAAGTGT+AGG | 0.597901 | 7_2:-73016352 | Msa1074940:CDS |
| TCACCTGACAAGGAATGTAT+CGG | 0.598938 | 7_2:-73013801 | Msa1074940:CDS |
| TACAAGCGATGAAGAACTTG+AGG | 0.599789 | 7_2:-73013759 | Msa1074940:CDS |
| TCTGCCACATTGGCTGACGA+GGG | 0.600905 | 7_2:+73013851 | None:intergenic |
| GGTCTGCCAAGAGGAATGAT+GGG | 0.603431 | 7_2:-73015790 | Msa1074940:CDS |
| TAATGAATCCTTGGTTGTAT+CGG | 0.604817 | 7_2:+73016711 | None:intergenic |
| TCTGCATCACTGAAATGGAA+AGG | 0.604858 | 7_2:-73015764 | Msa1074940:CDS |
| GAGAGAAGTTGCTGCTCTCG+AGG | 0.605091 | 7_2:-73016206 | Msa1074940:CDS |
| TCGTGCCCTCCTGCTCGAAG+AGG | 0.606373 | 7_2:+73015263 | None:intergenic |
| TCCAATATCAGATCCAATTG+TGG | 0.607623 | 7_2:-73015023 | Msa1074940:CDS |
| CGGTGAAGGTGAGGATGGTG+CGG | 0.610273 | 7_2:-73016287 | Msa1074940:CDS |
| AATTATCTCTCTCAGAACAA+TGG | 0.623116 | 7_2:+73015874 | None:intergenic |
| CTCGGCTAGTAGAGTCGGTG+TGG | 0.624389 | 7_2:-73015634 | Msa1074940:CDS |
| TCCAAAGCTTAAGTTTCCTG+CGG | 0.624548 | 7_2:+73014979 | None:intergenic |
| GCATGGTAGCTCAGCACACA+AGG | 0.626811 | 7_2:-73016158 | Msa1074940:CDS |
| TAAGCATCAGAATACGACAT+TGG | 0.627866 | 7_2:-73013262 | Msa1074940:three_prime_UTR |
| GAGAAAGTTGCAGAGGCAGG+AGG | 0.628672 | 7_2:-73013830 | Msa1074940:CDS |
| AATTCTTTAGAAAGCAATCG+TGG | 0.631921 | 7_2:-73016607 | Msa1074940:CDS |
| GCCTCCCTCGTCAGCCAATG+TGG | 0.632177 | 7_2:-73013855 | Msa1074940:CDS |
| TAGAAGCTTCCCTTATAGCG+CGG | 0.638046 | 7_2:-73013894 | Msa1074940:CDS |
| GAAAACGGTGAAGGTGAGGA+TGG | 0.639739 | 7_2:-73016292 | Msa1074940:CDS |
| TCTGTCCTCTTCGAGCAGGA+GGG | 0.641785 | 7_2:-73015268 | Msa1074940:CDS |
| GGAATGTATCGGCTGTTCAG+CGG | 0.642042 | 7_2:-73013790 | Msa1074940:CDS |
| ATGGTAATCACAAAGAGCAA+GGG | 0.648700 | 7_2:-73013667 | Msa1074940:CDS |
| GGTCAAATGGGTCTGCCAAG+AGG | 0.653307 | 7_2:-73015799 | Msa1074940:CDS |
| GGTTCTCTGTAACTTCACTC+CGG | 0.666443 | 7_2:-73014282 | Msa1074940:CDS |
| GTATCGGCTGTTCAGCGGAG+AGG | 0.668187 | 7_2:-73013785 | Msa1074940:CDS |
| GAGAACGACGAAAGGCGAGG+TGG | 0.669891 | 7_2:-73014527 | Msa1074940:CDS |
| GGATGATGTCAACAGGTCCG+AGG | 0.673674 | 7_2:-73016830 | Msa1074940:five_prime_UTR |
| TGGATCAGTTGGGATCTCCA+AGG | 0.674303 | 7_2:+73015042 | None:intergenic |
| GTTCAAATAAATCTGTTGGG+AGG | 0.678740 | 7_2:-73015379 | Msa1074940:CDS |
| AGTGAGAACGACGAAAGGCG+AGG | 0.682233 | 7_2:-73014530 | Msa1074940:CDS |
| CTTGGAGGCCTTGAACGGAG+AGG | 0.685220 | 7_2:-73014225 | Msa1074940:intron |
| TGTGGAACGTAGAATGTCAG+CGG | 0.685466 | 7_2:-73013924 | Msa1074940:CDS |
| TTATCAATGATAGATGAAAG+CGG | 0.686319 | 7_2:+73013725 | None:intergenic |
| TGATGTCAACAGGTCCGAGG+AGG | 0.688664 | 7_2:-73016827 | Msa1074940:five_prime_UTR |
| GGATGAGTTCTGTCCTGACG+CGG | 0.692057 | 7_2:-73014261 | Msa1074940:CDS |
| TGAAGAAAACGGTGAAGGTG+AGG | 0.702094 | 7_2:-73016296 | Msa1074940:CDS |
| AATGCTGAAGAAAACGGTGA+AGG | 0.708600 | 7_2:-73016301 | Msa1074940:CDS |
| ACAAGGTTCACACACCTGCG+CGG | 0.727930 | 7_2:-73016141 | Msa1074940:CDS |
| ATACGACACCGATACAACCA+AGG | 0.730986 | 7_2:-73016719 | Msa1074940:CDS |
| GGATAGACAAGTCAGCCAGG+AGG | 0.755346 | 7_2:-73014429 | Msa1074940:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTAAAATTAAAAAAAT+TGG | - | chr7_2:73014468-73014487 | Msa1074940:CDS | 0.0% |
| !!! | TATTTAAAATTAAAAAAATT+GGG | - | chr7_2:73014469-73014488 | Msa1074940:CDS | 0.0% |
| !! | GAAAATTTGAATTTATAATT+TGG | - | chr7_2:73015178-73015197 | Msa1074940:intron | 10.0% |
| !! | AAATCTATAAACTCAAATAA+AGG | - | chr7_2:73013529-73013548 | Msa1074940:three_prime_UTR | 15.0% |
| !! | TCATAAATTAAATACTTATG+TGG | - | chr7_2:73015646-73015665 | Msa1074940:CDS | 15.0% |
| !!! | GTTTATTTTTATTATTATGC+AGG | - | chr7_2:73015707-73015726 | Msa1074940:CDS | 15.0% |
| !! | ATTCAGAAGATTAAAAAATA+TGG | - | chr7_2:73016538-73016557 | Msa1074940:CDS | 15.0% |
| !! | GGAATCAAAAATTAAAGAAA+TGG | - | chr7_2:73013786-73013805 | Msa1074940:CDS | 20.0% |
| !! | AAAATTAAAAAAATTGGGGA+AGG | - | chr7_2:73014474-73014493 | Msa1074940:CDS | 20.0% |
| !! | AAATTAAAAAAATTGGGGAA+GGG | - | chr7_2:73014475-73014494 | Msa1074940:CDS | 20.0% |
| !!! | AATTAGTTTTACTCCATTAA+TGG | + | chr7_2:73014513-73014532 | None:intergenic | 20.0% |
| !!! | CTTTTTGTTTTTATACTGAT+CGG | - | chr7_2:73015126-73015145 | Msa1074940:intron | 20.0% |
| !! | AAACTTGATATAACTACAAA+TGG | - | chr7_2:73015284-73015303 | Msa1074940:CDS | 20.0% |
| !!! | AAGTATTCTGAATTTGAAAT+GGG | - | chr7_2:73015983-73016002 | Msa1074940:intron | 20.0% |
| !! | TGAAATTAAAATTGCAGTAA+AGG | + | chr7_2:73016014-73016033 | None:intergenic | 20.0% |
| !!! | AATAAACAGACAAGATATTT+TGG | - | chr7_2:73016561-73016580 | Msa1074940:CDS | 20.0% |
| !! | TATTTATATACACCCAAAAA+AGG | + | chr7_2:73016628-73016647 | None:intergenic | 20.0% |
| ! | GAAAATCTAGTTACATTATG+TGG | - | chr7_2:73013195-73013214 | Msa1074940:three_prime_UTR | 25.0% |
| ! | TTCAAAAGATCCAAAAAGTA+AGG | - | chr7_2:73013408-73013427 | Msa1074940:three_prime_UTR | 25.0% |
| ! | AACAAATAAACTGCAATCAA+AGG | - | chr7_2:73013486-73013505 | Msa1074940:three_prime_UTR | 25.0% |
| ! | ATTGTTAATGCTGAAGAAAA+CGG | - | chr7_2:73013739-73013758 | Msa1074940:CDS | 25.0% |
| ! | ATGATTTAGCAACCAAAATA+AGG | + | chr7_2:73014014-73014033 | None:intergenic | 25.0% |
| ! | AGATAATTTCACAAGCATTT+GGG | - | chr7_2:73014187-73014206 | Msa1074940:intron | 25.0% |
| ! | AATTAAAAAAATTGGGGAAG+GGG | - | chr7_2:73014476-73014495 | Msa1074940:CDS | 25.0% |
| !!! | TTATTTTACAACAATCCTGA+AGG | - | chr7_2:73014541-73014560 | Msa1074940:CDS | 25.0% |
| !! | TATTTTACAACAATCCTGAA+GGG | - | chr7_2:73014542-73014561 | Msa1074940:CDS | 25.0% |
| ! | TAGATTAAAATTCATTCACC+AGG | - | chr7_2:73014918-73014937 | Msa1074940:intron | 25.0% |
| ! | TTCATAGATACTGTAAAGAA+TGG | + | chr7_2:73015252-73015271 | None:intergenic | 25.0% |
| !! | AAATGGATTTGCAAAATATG+TGG | - | chr7_2:73015301-73015320 | Msa1074940:CDS | 25.0% |
| ! | TTTGTCATATAATTGATGTG+AGG | - | chr7_2:73015325-73015344 | Msa1074940:CDS | 25.0% |
| ! | AATTTATGAAATTAACCTCC+TGG | + | chr7_2:73015635-73015654 | None:intergenic | 25.0% |
| ! | ATAAATACAATGACAACGTA+AGG | + | chr7_2:73015683-73015702 | None:intergenic | 25.0% |
| !! | CGTTGTCATTGTATTTATTT+TGG | - | chr7_2:73015685-73015704 | Msa1074940:CDS | 25.0% |
| ! | TATAATCAATGAAAGACTGA+TGG | + | chr7_2:73015742-73015761 | None:intergenic | 25.0% |
| !! | TCAGTCTTTCATTGATTATA+CGG | - | chr7_2:73015742-73015761 | Msa1074940:CDS | 25.0% |
| ! | TAATATTGATGTAGAACTCA+TGG | - | chr7_2:73015913-73015932 | Msa1074940:intron | 25.0% |
| !! | GAAGTATTCTGAATTTGAAA+TGG | - | chr7_2:73015982-73016001 | Msa1074940:intron | 25.0% |
| !!! | ACTGCAATTTTAATTTCACT+TGG | - | chr7_2:73016016-73016035 | Msa1074940:CDS | 25.0% |
| ! | TTATCAATGATAGATGAAAG+CGG | + | chr7_2:73016324-73016343 | None:intergenic | 25.0% |
| ! | CTAAAGTAAAAATGAATGTC+AGG | - | chr7_2:73016499-73016518 | Msa1074940:CDS | 25.0% |
| ! | AAAATGAATGTCAGGAATTT+AGG | - | chr7_2:73016507-73016526 | Msa1074940:CDS | 25.0% |
| !!! | TTTTGGAATTCTTCATTACT+AGG | - | chr7_2:73016578-73016597 | Msa1074940:CDS | 25.0% |
| !! | TTTGGAATTCTTCATTACTA+GGG | - | chr7_2:73016579-73016598 | Msa1074940:CDS | 25.0% |
| ! | TTCATTACTAGGGAAAATTA+AGG | - | chr7_2:73016589-73016608 | Msa1074940:CDS | 25.0% |
| ! | ATTCTTTAATGCTACTCTTA+AGG | + | chr7_2:73016656-73016675 | None:intergenic | 25.0% |
| ! | TTATCAAACAAACATGAAGA+AGG | + | chr7_2:73016698-73016717 | None:intergenic | 25.0% |
| ! | TCATCGATATATGCTTATTA+AGG | - | chr7_2:73016830-73016849 | Msa1074940:five_prime_UTR | 25.0% |
| ! | TATATGCTTATTAAGGATGA+TGG | - | chr7_2:73016837-73016856 | Msa1074940:five_prime_UTR | 25.0% |
| !!! | TTATTAAGGATGATGGATTT+AGG | - | chr7_2:73016844-73016863 | Msa1074940:five_prime_UTR | 25.0% |
| TAATGAATCCTTGGTTGTAT+CGG | + | chr7_2:73013338-73013357 | None:intergenic | 30.0% | |
| ! | TTGAGATGATAATGAATCCT+TGG | + | chr7_2:73013347-73013366 | None:intergenic | 30.0% |
| AAGGATTCATTATCATCTCA+AGG | - | chr7_2:73013346-73013365 | Msa1074940:three_prime_UTR | 30.0% | |
| ! | AATTCTTTAGAAAGCAATCG+TGG | - | chr7_2:73013439-73013458 | Msa1074940:three_prime_UTR | 30.0% |
| TGATGAAAAACCTGTTATAG+AGG | - | chr7_2:73013642-73013661 | Msa1074940:CDS | 30.0% | |
| AAAACCTGTTATAGAGGTTA+AGG | - | chr7_2:73013648-73013667 | Msa1074940:CDS | 30.0% | |
| ATTTCCTTAACCTCTATAAC+AGG | + | chr7_2:73013655-73013674 | None:intergenic | 30.0% | |
| GGTTAAGGAAATTGAAATCT+TGG | - | chr7_2:73013663-73013682 | Msa1074940:CDS | 30.0% | |
| AAGGAAATTGAAATCTTGGA+TGG | - | chr7_2:73013667-73013686 | Msa1074940:CDS | 30.0% | |
| ACGAATTGAAAATCTTGAAG+AGG | - | chr7_2:73013813-73013832 | Msa1074940:CDS | 30.0% | |
| ATATACATGCTTGTAAGCAT+TGG | - | chr7_2:73013944-73013963 | Msa1074940:intron | 30.0% | |
| !!! | ATTTTGGTTGCTAAATCATG+CGG | - | chr7_2:73014015-73014034 | Msa1074940:intron | 30.0% |
| AATTATCTCTCTCAGAACAA+TGG | + | chr7_2:73014175-73014194 | None:intergenic | 30.0% | |
| GAGATAATTTCACAAGCATT+TGG | - | chr7_2:73014186-73014205 | Msa1074940:intron | 30.0% | |
| CATTTCCTGATTTACCATTT+GGG | + | chr7_2:73014311-73014330 | None:intergenic | 30.0% | |
| GGAAGTTATTACTCCATTAA+TGG | - | chr7_2:73014497-73014516 | Msa1074940:CDS | 30.0% | |
| TCCTGTTCAAATAAATCTGT+TGG | - | chr7_2:73014663-73014682 | Msa1074940:intron | 30.0% | |
| CCTGTTCAAATAAATCTGTT+GGG | - | chr7_2:73014664-73014683 | Msa1074940:intron | 30.0% | |
| ACTAGAAACATAATCAAGCA+AGG | + | chr7_2:73014862-73014881 | None:intergenic | 30.0% | |
| TTAATCTACTCAATCCTTTG+AGG | + | chr7_2:73014906-73014925 | None:intergenic | 30.0% | |
| AAAACCTTTGAATCCACAAT+TGG | + | chr7_2:73015039-73015058 | None:intergenic | 30.0% | |
| TAACTCTTCCATAAGCATAA+AGG | + | chr7_2:73015406-73015425 | None:intergenic | 30.0% | |
| ! | TATCCATAAGCATGTCTTTT+GGG | + | chr7_2:73015602-73015621 | None:intergenic | 30.0% |
| ! | CAGTCTTTCATTGATTATAC+GGG | - | chr7_2:73015743-73015762 | Msa1074940:CDS | 30.0% |
| ! | ATTTTTCTTGTCTGTTACGA+AGG | - | chr7_2:73015854-73015873 | Msa1074940:CDS | 30.0% |
| TTCCTTTGCTAATGCAAAAT+CGG | + | chr7_2:73015953-73015972 | None:intergenic | 30.0% | |
| ATTTCATCCTTAGACTATTG+TGG | - | chr7_2:73016104-73016123 | Msa1074940:CDS | 30.0% | |
| GCTTTCATCTATCATTGATA+AGG | - | chr7_2:73016323-73016342 | Msa1074940:CDS | 30.0% | |
| !!! | TCAATTTCCCTTCCTTTTTT+GGG | - | chr7_2:73016613-73016632 | Msa1074940:CDS | 30.0% |
| ATATACACCCAAAAAAGGAA+GGG | + | chr7_2:73016623-73016642 | None:intergenic | 30.0% | |
| TATATACACCCAAAAAAGGA+AGG | + | chr7_2:73016624-73016643 | None:intergenic | 30.0% | |
| ! | GTGTACAAACTTCTTTTACA+AGG | - | chr7_2:73016759-73016778 | Msa1074940:CDS | 30.0% |
| !! | ATGATGGATTTAGGAATTCA+TGG | - | chr7_2:73016853-73016872 | Msa1074940:five_prime_UTR | 30.0% |
| ATTATGTGGATGATGTCAAC+AGG | - | chr7_2:73013209-73013228 | Msa1074940:three_prime_UTR | 35.0% | |
| ! | TGATAATCACTCCACTGATT+TGG | - | chr7_2:73013273-73013292 | Msa1074940:three_prime_UTR | 35.0% |
| TTGGAGAAAGAGCAAAAAGA+AGG | - | chr7_2:73013292-73013311 | Msa1074940:three_prime_UTR | 35.0% | |
| TGGAGAAAGAGCAAAAAGAA+GGG | - | chr7_2:73013293-73013312 | Msa1074940:three_prime_UTR | 35.0% | |
| !! | TTCGCTCTAACCTTACTTTT+TGG | + | chr7_2:73013421-73013440 | None:intergenic | 35.0% |
| AAACTGCAATCAAAGGTAAC+AGG | - | chr7_2:73013493-73013512 | Msa1074940:three_prime_UTR | 35.0% | |
| !! | CTTTTGTTTGTAACTCTTGC+AGG | + | chr7_2:73013556-73013575 | None:intergenic | 35.0% |
| !! | AACTTTCACTGGCTTAGTAT+TGG | + | chr7_2:73013587-73013606 | None:intergenic | 35.0% |
| AGTTCCTGCAAAAGTTTCTT+CGG | - | chr7_2:73013603-73013622 | Msa1074940:exon | 35.0% | |
| ATCTTGGATGGATCTTCTAA+TGG | - | chr7_2:73013679-73013698 | Msa1074940:CDS | 35.0% | |
| TATTCTATTGTACCAGAGCA+TGG | - | chr7_2:73013871-73013890 | Msa1074940:CDS | 35.0% | |
| CATGTATATAGAGCCTAGAA+AGG | + | chr7_2:73013933-73013952 | None:intergenic | 35.0% | |
| ATTGCCAAGAATACTGTTTC+TGG | - | chr7_2:73013988-73014007 | Msa1074940:intron | 35.0% | |
| !!! | TACTGTTTCTGGCCTTATTT+TGG | - | chr7_2:73013999-73014018 | Msa1074940:intron | 35.0% |
| ! | TGTGATTCAGGTTAACTTTC+TGG | - | chr7_2:73014139-73014158 | Msa1074940:intron | 35.0% |
| !! | AAATGGAAAGGTATCCCAAA+TGG | - | chr7_2:73014294-73014313 | Msa1074940:CDS | 35.0% |
| CCATTTCCTGATTTACCATT+TGG | + | chr7_2:73014312-73014331 | None:intergenic | 35.0% | |
| CCAAATGGTAAATCAGGAAA+TGG | - | chr7_2:73014309-73014328 | Msa1074940:CDS | 35.0% | |
| !! | TCTTTCTAAGGCAAACGTAA+AGG | + | chr7_2:73014373-73014392 | None:intergenic | 35.0% |
| ! | TCGAATCATGGATCTTTTCT+CGG | - | chr7_2:73014394-73014413 | Msa1074940:intron | 35.0% |
| GATTTAAACTCTACCCTTAG+AGG | - | chr7_2:73014564-73014583 | Msa1074940:CDS | 35.0% | |
| ! | GAGAAGTTTTCTGTGCTTTT+AGG | - | chr7_2:73014605-73014624 | Msa1074940:CDS | 35.0% |
| GACTCCTTATATGCAATCTT+CGG | - | chr7_2:73014632-73014651 | Msa1074940:intron | 35.0% | |
| CTTATATGCAATCTTCGGTT+GGG | - | chr7_2:73014637-73014656 | Msa1074940:intron | 35.0% | |
| TTATATGCAATCTTCGGTTG+GGG | - | chr7_2:73014638-73014657 | Msa1074940:intron | 35.0% | |
| CCCAACAGATTTATTTGAAC+AGG | + | chr7_2:73014667-73014686 | None:intergenic | 35.0% | |
| GTTCAAATAAATCTGTTGGG+AGG | - | chr7_2:73014667-73014686 | Msa1074940:intron | 35.0% | |
| !! | AGAGTCTTTGAAAAGCATCT+TGG | + | chr7_2:73014761-73014780 | None:intergenic | 35.0% |
| GAGGCTTAGAACAAAAGAAT+GGG | + | chr7_2:73014887-73014906 | None:intergenic | 35.0% | |
| TGAGGCTTAGAACAAAAGAA+TGG | + | chr7_2:73014888-73014907 | None:intergenic | 35.0% | |
| !! | TCTTTTGTTCTAAGCCTCAA+AGG | - | chr7_2:73014889-73014908 | Msa1074940:intron | 35.0% |
| AAAATTCATTCACCAGGTCA+TGG | - | chr7_2:73014924-73014943 | Msa1074940:intron | 35.0% | |
| CGATGTTCAATGCAATTCTT+CGG | - | chr7_2:73014974-73014993 | Msa1074940:CDS | 35.0% | |
| GATGTTCAATGCAATTCTTC+GGG | - | chr7_2:73014975-73014994 | Msa1074940:CDS | 35.0% | |
| GATCTGATATTGGATCAGTT+GGG | + | chr7_2:73015017-73015036 | None:intergenic | 35.0% | |
| TCCAATATCAGATCCAATTG+TGG | - | chr7_2:73015023-73015042 | Msa1074940:CDS | 35.0% | |
| TCCACAATTGGATCTGATAT+TGG | + | chr7_2:73015027-73015046 | None:intergenic | 35.0% | |
| AGATCCAATTGTGGATTCAA+AGG | - | chr7_2:73015032-73015051 | Msa1074940:CDS | 35.0% | |
| TGGTGCACAGCTAAAAAATT+CGG | - | chr7_2:73015092-73015111 | Msa1074940:CDS | 35.0% | |
| AGATTGCTCACTGATATGTT+TGG | - | chr7_2:73015453-73015472 | Msa1074940:intron | 35.0% | |
| CATTGATGCTGAAGATTGTT+CGG | - | chr7_2:73015476-73015495 | Msa1074940:intron | 35.0% | |
| ! | CTATCCATAAGCATGTCTTT+TGG | + | chr7_2:73015603-73015622 | None:intergenic | 35.0% |
| ATCAATGAAAGACTGATGGA+TGG | + | chr7_2:73015738-73015757 | None:intergenic | 35.0% | |
| AATGGTAATCACAAAGAGCA+AGG | - | chr7_2:73016378-73016397 | Msa1074940:CDS | 35.0% | |
| ATGGTAATCACAAAGAGCAA+GGG | - | chr7_2:73016379-73016398 | Msa1074940:CDS | 35.0% | |
| ! | TAGTTGATATCTGGCATTTG+TGG | + | chr7_2:73016415-73016434 | None:intergenic | 35.0% |
| ! | TTCACGAAGTAGTTGATATC+TGG | + | chr7_2:73016424-73016443 | None:intergenic | 35.0% |
| ATCAACTACTTCGTGAAGTT+TGG | - | chr7_2:73016427-73016446 | Msa1074940:CDS | 35.0% | |
| TTCACAAGTTTCACATCACA+TGG | + | chr7_2:73016454-73016473 | None:intergenic | 35.0% | |
| !!! | CTCAATTTCCCTTCCTTTTT+TGG | - | chr7_2:73016612-73016631 | Msa1074940:CDS | 35.0% |
| TAAGCATCAGAATACGACAT+TGG | - | chr7_2:73016784-73016803 | Msa1074940:CDS | 35.0% | |
| TTGCTCTTTCTCCAAATCAG+TGG | + | chr7_2:73013287-73013306 | None:intergenic | 40.0% | |
| TAGAAAGCAATCGTGGATCA+AGG | - | chr7_2:73013446-73013465 | Msa1074940:three_prime_UTR | 40.0% | |
| AGAAAGCAATCGTGGATCAA+GGG | - | chr7_2:73013447-73013466 | Msa1074940:three_prime_UTR | 40.0% | |
| ! | ACTTTTGCAGGAACTTTCAC+TGG | + | chr7_2:73013598-73013617 | None:intergenic | 40.0% |
| ! | GATTCCGAAGAAACTTTTGC+AGG | + | chr7_2:73013610-73013629 | None:intergenic | 40.0% |
| GTTTCTTCGGAATCTTCTGA+AGG | - | chr7_2:73013616-73013635 | Msa1074940:CDS | 40.0% | |
| AATGCTGAAGAAAACGGTGA+AGG | - | chr7_2:73013745-73013764 | Msa1074940:CDS | 40.0% | |
| !! | AATCGTTGCTTTCCTTTTCG+GGG | + | chr7_2:73013971-73013990 | None:intergenic | 40.0% |
| !! | CAATCGTTGCTTTCCTTTTC+GGG | + | chr7_2:73013972-73013991 | None:intergenic | 40.0% |
| !! | GCAATCGTTGCTTTCCTTTT+CGG | + | chr7_2:73013973-73013992 | None:intergenic | 40.0% |
| AAGGCCAGAAACAGTATTCT+TGG | + | chr7_2:73013995-73014014 | None:intergenic | 40.0% | |
| CATGCGGTAATGATGTTTCA+AGG | - | chr7_2:73014031-73014050 | Msa1074940:intron | 40.0% | |
| CTGAATCACAAGTCAAGATG+CGG | + | chr7_2:73014129-73014148 | None:intergenic | 40.0% | |
| TCACAAGCATTTGGGAATTC+CGG | - | chr7_2:73014195-73014214 | Msa1074940:intron | 40.0% | |
| TCTGCATCACTGAAATGGAA+AGG | - | chr7_2:73014282-73014301 | Msa1074940:CDS | 40.0% | |
| GGTATCCCAAATGGTAAATC+AGG | - | chr7_2:73014303-73014322 | Msa1074940:CDS | 40.0% | |
| !!! | GGAAATGGTTTTATGCAGAC+CGG | - | chr7_2:73014324-73014343 | Msa1074940:intron | 40.0% |
| TAAGGCAAACGTAAAGGTTC+CGG | + | chr7_2:73014367-73014386 | None:intergenic | 40.0% | |
| CCATGATTCGACTCTTTCTA+AGG | + | chr7_2:73014385-73014404 | None:intergenic | 40.0% | |
| CCTTAGAAAGAGTCGAATCA+TGG | - | chr7_2:73014382-73014401 | Msa1074940:intron | 40.0% | |
| GGTAGAGTTTAAATCCCTTC+AGG | + | chr7_2:73014559-73014578 | None:intergenic | 40.0% | |
| ATCGCATATGCAACCTCTAA+GGG | + | chr7_2:73014580-73014599 | None:intergenic | 40.0% | |
| TATCGCATATGCAACCTCTA+AGG | + | chr7_2:73014581-73014600 | None:intergenic | 40.0% | |
| CCAACCGAAGATTGCATATA+AGG | + | chr7_2:73014639-73014658 | None:intergenic | 40.0% | |
| CCTTATATGCAATCTTCGGT+TGG | - | chr7_2:73014636-73014655 | Msa1074940:intron | 40.0% | |
| GAAACGTTTCCATCAATCTC+TGG | - | chr7_2:73014724-73014743 | Msa1074940:intron | 40.0% | |
| GGATCTGATATTGGATCAGT+TGG | + | chr7_2:73015018-73015037 | None:intergenic | 40.0% | |
| TCCAAAGCTTAAGTTTCCTG+CGG | + | chr7_2:73015070-73015089 | None:intergenic | 40.0% | |
| !! | GGAAACTTAAGCTTTGGATC+TGG | - | chr7_2:73015072-73015091 | Msa1074940:CDS | 40.0% |
| TCTTCGCTATCACATCTTAG+AGG | - | chr7_2:73015217-73015236 | Msa1074940:intron | 40.0% | |
| CTTCGCTATCACATCTTAGA+GGG | - | chr7_2:73015218-73015237 | Msa1074940:intron | 40.0% | |
| ATGTGACTCTTGCAGTATCA+AGG | - | chr7_2:73015349-73015368 | Msa1074940:CDS | 40.0% | |
| ! | CCATAAGCATAAAGGTGTGT+AGG | + | chr7_2:73015398-73015417 | None:intergenic | 40.0% |
| CCTACACACCTTTATGCTTA+TGG | - | chr7_2:73015395-73015414 | Msa1074940:CDS | 40.0% | |
| !!! | TGTCTTTTGGGAGCATTAGA+AGG | + | chr7_2:73015590-73015609 | None:intergenic | 40.0% |
| ! | GTCCGATTTTGCATTAGCAA+AGG | - | chr7_2:73015948-73015967 | Msa1074940:intron | 40.0% |
| CTACGTTCCACAATAGTCTA+AGG | + | chr7_2:73016114-73016133 | None:intergenic | 40.0% | |
| GCTATAAGGGAAGCTTCTAA+TGG | + | chr7_2:73016151-73016170 | None:intergenic | 40.0% | |
| TCACCTGACAAGGAATGTAT+CGG | - | chr7_2:73016245-73016264 | Msa1074940:CDS | 40.0% | |
| TACAAGCGATGAAGAACTTG+AGG | - | chr7_2:73016287-73016306 | Msa1074940:CDS | 40.0% | |
| TTTCCATTTGTAGCGACTGT+TGG | + | chr7_2:73016360-73016379 | None:intergenic | 40.0% | |
| ACAGTCGCTACAAATGGAAA+TGG | - | chr7_2:73016360-73016379 | Msa1074940:CDS | 40.0% | |
| TTGATATCTGGCATTTGTGG+TGG | + | chr7_2:73016412-73016431 | None:intergenic | 40.0% | |
| ATACGACACCGATACAACCA+AGG | - | chr7_2:73013327-73013346 | Msa1074940:three_prime_UTR | 45.0% | |
| TCTAATGGCGCTCAAAGTGT+AGG | - | chr7_2:73013694-73013713 | Msa1074940:CDS | 45.0% | |
| TGAAGAAAACGGTGAAGGTG+AGG | - | chr7_2:73013750-73013769 | Msa1074940:CDS | 45.0% | |
| !! | CGCATCTTGACTTGTGATTC+AGG | - | chr7_2:73014127-73014146 | Msa1074940:intron | 45.0% |
| !! | CATAATGGGACTGACTTGAC+CGG | + | chr7_2:73014217-73014236 | None:intergenic | 45.0% |
| GTCAAGTCAGTCCCATTATG+AGG | - | chr7_2:73014217-73014236 | Msa1074940:intron | 45.0% | |
| AGTCAGTCCCATTATGAGGT+TGG | - | chr7_2:73014221-73014240 | Msa1074940:intron | 45.0% | |
| AGACTTCCCATCATTCCTCT+TGG | + | chr7_2:73014265-73014284 | None:intergenic | 45.0% | |
| GGAAGTCTGCATCACTGAAA+TGG | - | chr7_2:73014277-73014296 | Msa1074940:CDS | 45.0% | |
| TTATGCAGACCGGTGAAGAT+TGG | - | chr7_2:73014334-73014353 | Msa1074940:intron | 45.0% | |
| ! | CTTTTCTCGGCTAGTAGAGT+CGG | - | chr7_2:73014407-73014426 | Msa1074940:intron | 45.0% |
| TGATTGTGATCACCTAGAGC+AGG | + | chr7_2:73014702-73014721 | None:intergenic | 45.0% | |
| ! | GCTCTAGGTGATCACAATCA+AGG | - | chr7_2:73014702-73014721 | Msa1074940:intron | 45.0% |
| AGCGTTTCTCCAGAGATTGA+TGG | + | chr7_2:73014736-73014755 | None:intergenic | 45.0% | |
| CATACCATTCTTGCCATCAC+AGG | + | chr7_2:73014822-73014841 | None:intergenic | 45.0% | |
| AATTCTTCGGGAATCAGCCT+TGG | - | chr7_2:73014987-73015006 | Msa1074940:CDS | 45.0% | |
| CTTAAGTTTCCTGCGGGAAT+CGG | + | chr7_2:73015063-73015082 | None:intergenic | 45.0% | |
| CCAAAGCTTAAGTTTCCTGC+GGG | + | chr7_2:73015069-73015088 | None:intergenic | 45.0% | |
| GGAAGAGTTACTTGAACTGC+AGG | - | chr7_2:73015416-73015435 | Msa1074940:CDS | 45.0% | |
| GAGTTACTTGAACTGCAGGT+TGG | - | chr7_2:73015420-73015439 | Msa1074940:CDS | 45.0% | |
| ! | TTGAACTGCAGGTTGGCAAT+TGG | - | chr7_2:73015427-73015446 | Msa1074940:intron | 45.0% |
| AGAACAGTGAGAACGACGAA+AGG | - | chr7_2:73015511-73015530 | Msa1074940:intron | 45.0% | |
| GAAGGTCACTCAAGTCGTTA+AGG | + | chr7_2:73015572-73015591 | None:intergenic | 45.0% | |
| GCTCCCAAAAGACATGCTTA+TGG | - | chr7_2:73015596-73015615 | Msa1074940:intron | 45.0% | |
| TATGGATAGACAAGTCAGCC+AGG | - | chr7_2:73015614-73015633 | Msa1074940:intron | 45.0% | |
| GGTTCTCTGTAACTTCACTC+CGG | - | chr7_2:73015764-73015783 | Msa1074940:CDS | 45.0% | |
| TGTGGAACGTAGAATGTCAG+CGG | - | chr7_2:73016122-73016141 | Msa1074940:CDS | 45.0% | |
| TAGAAGCTTCCCTTATAGCG+CGG | - | chr7_2:73016152-73016171 | Msa1074940:CDS | 45.0% | |
| TGCAACTTTCTCTGCCACAT+TGG | + | chr7_2:73016208-73016227 | None:intergenic | 45.0% | |
| TCTCCAACAGTCGCTACAAA+TGG | - | chr7_2:73016354-73016373 | Msa1074940:CDS | 45.0% | |
| GCATCAGAATACGACATTGG+AGG | - | chr7_2:73016787-73016806 | Msa1074940:CDS | 45.0% | |
| !!! | ATTTAAAATTAAAAAAATTG+GGG | - | chr7_2:73014470-73014489 | Msa1074940:CDS | 5.0% |
| CATCTTGACAAGTGCCTCCT+CGG | + | chr7_2:73013236-73013255 | None:intergenic | 50.0% | |
| GAAAACGGTGAAGGTGAGGA+TGG | - | chr7_2:73013754-73013773 | Msa1074940:CDS | 50.0% | |
| !! | GTAAGCATTGGACCCCGAAA+AGG | - | chr7_2:73013956-73013975 | Msa1074940:intron | 50.0% |
| AGTCCCATTATGAGGTTGGC+TGG | - | chr7_2:73014225-73014244 | Msa1074940:intron | 50.0% | |
| ! | GTCCCATTATGAGGTTGGCT+GGG | - | chr7_2:73014226-73014245 | Msa1074940:CDS | 50.0% |
| GACCCAGCCAACCTCATAAT+GGG | + | chr7_2:73014231-73014250 | None:intergenic | 50.0% | |
| TGACCCAGCCAACCTCATAA+TGG | + | chr7_2:73014232-73014251 | None:intergenic | 50.0% | |
| ! | ATGAGGTTGGCTGGGTCAAA+TGG | - | chr7_2:73014234-73014253 | Msa1074940:CDS | 50.0% |
| ! | TGAGGTTGGCTGGGTCAAAT+GGG | - | chr7_2:73014235-73014254 | Msa1074940:CDS | 50.0% |
| GGTCTGCCAAGAGGAATGAT+GGG | - | chr7_2:73014256-73014275 | Msa1074940:CDS | 50.0% | |
| GGTCTCTTGCCAATCTTCAC+CGG | + | chr7_2:73014346-73014365 | None:intergenic | 50.0% | |
| GGTGAAGATTGGCAAGAGAC+CGG | - | chr7_2:73014345-73014364 | Msa1074940:intron | 50.0% | |
| AAATCTGTTGGGAGGCTGCT+AGG | - | chr7_2:73014675-73014694 | Msa1074940:intron | 50.0% | |
| CTTGCCTGTGATGGCAAGAA+TGG | - | chr7_2:73014815-73014834 | Msa1074940:intron | 50.0% | |
| CTATGCACTGTTCCATGACC+TGG | + | chr7_2:73014939-73014958 | None:intergenic | 50.0% | |
| TGGATCAGTTGGGATCTCCA+AGG | + | chr7_2:73015007-73015026 | None:intergenic | 50.0% | |
| CCCGCAGGAAACTTAAGCTT+TGG | - | chr7_2:73015066-73015085 | Msa1074940:CDS | 50.0% | |
| TCGTCGTTCTCACTGTTCTC+TGG | + | chr7_2:73015510-73015529 | None:intergenic | 50.0% | |
| CAAGCATACCTCTCCGTTCA+AGG | + | chr7_2:73015832-73015851 | None:intergenic | 50.0% | |
| ! | GAGGGAGGCATATACACAAC+TGG | + | chr7_2:73016180-73016199 | None:intergenic | 50.0% |
| TGTGGCAGAGAAAGTTGCAG+AGG | - | chr7_2:73016209-73016228 | Msa1074940:CDS | 50.0% | |
| !! | GAGGAAAGTGTCACCTGACA+AGG | - | chr7_2:73016235-73016254 | Msa1074940:CDS | 50.0% |
| CAGCCGATACATTCCTTGTC+AGG | + | chr7_2:73016251-73016270 | None:intergenic | 50.0% | |
| !! | GGAATGTATCGGCTGTTCAG+CGG | - | chr7_2:73016256-73016275 | Msa1074940:CDS | 50.0% |
| GTAGCGACTGTTGGAGATGA+AGG | + | chr7_2:73016351-73016370 | None:intergenic | 50.0% | |
| GGATGATGTCAACAGGTCCG+AGG | - | chr7_2:73013216-73013235 | Msa1074940:three_prime_UTR | 55.0% | |
| TGATGTCAACAGGTCCGAGG+AGG | - | chr7_2:73013219-73013238 | Msa1074940:three_prime_UTR | 55.0% | |
| GAGAGAAGTTGCTGCTCTCG+AGG | - | chr7_2:73013840-73013859 | Msa1074940:CDS | 55.0% | |
| TGTGCTGAGCTACCATGCTC+TGG | + | chr7_2:73013886-73013905 | None:intergenic | 55.0% | |
| GCATGGTAGCTCAGCACACA+AGG | - | chr7_2:73013888-73013907 | Msa1074940:CDS | 55.0% | |
| ACAAGGTTCACACACCTGCG+CGG | - | chr7_2:73013905-73013924 | Msa1074940:CDS | 55.0% | |
| GGTCAAATGGGTCTGCCAAG+AGG | - | chr7_2:73014247-73014266 | Msa1074940:CDS | 55.0% | |
| GGGTCTGCCAAGAGGAATGA+TGG | - | chr7_2:73014255-73014274 | Msa1074940:CDS | 55.0% | |
| AGACTCTGTCCTCTTCGAGC+AGG | - | chr7_2:73014774-73014793 | Msa1074940:intron | 55.0% | |
| TCTGTCCTCTTCGAGCAGGA+GGG | - | chr7_2:73014778-73014797 | Msa1074940:intron | 55.0% | |
| GTGTGGTTGCTTGCCTGTGA+TGG | - | chr7_2:73014806-73014825 | Msa1074940:intron | 55.0% | |
| !!! | AAGGTTTTGCCGATTCCCGC+AGG | - | chr7_2:73015051-73015070 | Msa1074940:CDS | 55.0% |
| AGTGAGAACGACGAAAGGCG+AGG | - | chr7_2:73015516-73015535 | Msa1074940:intron | 55.0% | |
| GGATAGACAAGTCAGCCAGG+AGG | - | chr7_2:73015617-73015636 | Msa1074940:intron | 55.0% | |
| GCGTCAGGACAGAACTCATC+CGG | + | chr7_2:73015786-73015805 | None:intergenic | 55.0% | |
| GGATGAGTTCTGTCCTGACG+CGG | - | chr7_2:73015785-73015804 | Msa1074940:CDS | 55.0% | |
| GCTGTCTTGGAGGCCTTGAA+CGG | - | chr7_2:73015816-73015835 | Msa1074940:CDS | 55.0% | |
| CAACTGGAGCCGCGCTATAA+GGG | + | chr7_2:73016164-73016183 | None:intergenic | 55.0% | |
| ACAACTGGAGCCGCGCTATA+AGG | + | chr7_2:73016165-73016184 | None:intergenic | 55.0% | |
| ! | TCTGCCACATTGGCTGACGA+GGG | + | chr7_2:73016198-73016217 | None:intergenic | 55.0% |
| GCAGAGAAAGTTGCAGAGGC+AGG | - | chr7_2:73016213-73016232 | Msa1074940:CDS | 55.0% | |
| GAGAAAGTTGCAGAGGCAGG+AGG | - | chr7_2:73016216-73016235 | Msa1074940:CDS | 55.0% | |
| CGGTGAAGGTGAGGATGGTG+CGG | - | chr7_2:73013759-73013778 | Msa1074940:CDS | 60.0% | |
| AGGTGAGGATGGTGCGGCTA+TGG | - | chr7_2:73013765-73013784 | Msa1074940:CDS | 60.0% | |
| CTCGGCTAGTAGAGTCGGTG+TGG | - | chr7_2:73014412-73014431 | Msa1074940:intron | 60.0% | |
| GGCTAGTAGAGTCGGTGTGG+TGG | - | chr7_2:73014415-73014434 | Msa1074940:intron | 60.0% | |
| AGTAGAGTCGGTGTGGTGGC+AGG | - | chr7_2:73014419-73014438 | Msa1074940:intron | 60.0% | |
| AGGCTGCTAGGACCTGCTCT+AGG | - | chr7_2:73014687-73014706 | Msa1074940:intron | 60.0% | |
| CTCTGTCCTCTTCGAGCAGG+AGG | - | chr7_2:73014777-73014796 | Msa1074940:intron | 60.0% | |
| GAGAACGACGAAAGGCGAGG+TGG | - | chr7_2:73015519-73015538 | Msa1074940:intron | 60.0% | |
| TTCTGTCCTGACGCGGTTCC+AGG | - | chr7_2:73015792-73015811 | Msa1074940:CDS | 60.0% | |
| GGTTCCAGGAGCTGTCTTGG+AGG | - | chr7_2:73015806-73015825 | Msa1074940:CDS | 60.0% | |
| AAGGCCTCCAAGACAGCTCC+TGG | + | chr7_2:73015813-73015832 | None:intergenic | 60.0% | |
| CTTGGAGGCCTTGAACGGAG+AGG | - | chr7_2:73015821-73015840 | Msa1074940:CDS | 60.0% | |
| ! | CTCTGCCACATTGGCTGACG+AGG | + | chr7_2:73016199-73016218 | None:intergenic | 60.0% |
| !! | GTATCGGCTGTTCAGCGGAG+AGG | - | chr7_2:73016261-73016280 | Msa1074940:CDS | 60.0% |
| TCGTGCCCTCCTGCTCGAAG+AGG | + | chr7_2:73014786-73014805 | None:intergenic | 65.0% | |
| ACAGCTCCTGGAACCGCGTC+AGG | + | chr7_2:73015801-73015820 | None:intergenic | 65.0% | |
| CGCGGTTCCAGGAGCTGTCT+TGG | - | chr7_2:73015803-73015822 | Msa1074940:CDS | 65.0% | |
| GCCTCCCTCGTCAGCCAATG+TGG | - | chr7_2:73016191-73016210 | Msa1074940:CDS | 65.0% | |
| ! | GCCACATTGGCTGACGAGGG+AGG | + | chr7_2:73016195-73016214 | None:intergenic | 65.0% |
| CACCTGCGCGGCGCCTTTCT+AGG | - | chr7_2:73013917-73013936 | Msa1074940:CDS | 70.0% | |
| !! | AGCCTAGAAAGGCGCCGCGC+AGG | + | chr7_2:73013922-73013941 | None:intergenic | 70.0% |
| ! | CGAGCAGGAGGGCACGAGTG+TGG | - | chr7_2:73014789-73014808 | Msa1074940:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 73013187 | 73016881 | 73013187 | ID=Msa1074940;Name=Msa1074940 |
| chr7_2 | mRNA | 73013187 | 73016881 | 73013187 | ID=Msa1074940-mRNA-1;Parent=Msa1074940;Name=Msa1074940-mRNA-1;_AED=0.05;_eAED=0.05;_QI=66|1|1|1|1|1|7|423|710 |
| chr7_2 | exon | 73013187 | 73013951 | 73013187 | ID=Msa1074940-mRNA-1:exon:16921;Parent=Msa1074940-mRNA-1 |
| chr7_2 | exon | 73014226 | 73014339 | 73014226 | ID=Msa1074940-mRNA-1:exon:16920;Parent=Msa1074940-mRNA-1 |
| chr7_2 | exon | 73014430 | 73014630 | 73014430 | ID=Msa1074940-mRNA-1:exon:16919;Parent=Msa1074940-mRNA-1 |
| chr7_2 | exon | 73014955 | 73015128 | 73014955 | ID=Msa1074940-mRNA-1:exon:16918;Parent=Msa1074940-mRNA-1 |
| chr7_2 | exon | 73015232 | 73015441 | 73015232 | ID=Msa1074940-mRNA-1:exon:16917;Parent=Msa1074940-mRNA-1 |
| chr7_2 | exon | 73015628 | 73015919 | 73015628 | ID=Msa1074940-mRNA-1:exon:16916;Parent=Msa1074940-mRNA-1 |
| chr7_2 | exon | 73016016 | 73016881 | 73016016 | ID=Msa1074940-mRNA-1:exon:16915;Parent=Msa1074940-mRNA-1 |
| chr7_2 | five_prime_UTR | 73016816 | 73016881 | 73016816 | ID=Msa1074940-mRNA-1:five_prime_utr;Parent=Msa1074940-mRNA-1 |
| chr7_2 | CDS | 73016016 | 73016815 | 73016016 | ID=Msa1074940-mRNA-1:cds;Parent=Msa1074940-mRNA-1 |
| chr7_2 | CDS | 73015628 | 73015919 | 73015628 | ID=Msa1074940-mRNA-1:cds;Parent=Msa1074940-mRNA-1 |
| chr7_2 | CDS | 73015232 | 73015441 | 73015232 | ID=Msa1074940-mRNA-1:cds;Parent=Msa1074940-mRNA-1 |
| chr7_2 | CDS | 73014955 | 73015128 | 73014955 | ID=Msa1074940-mRNA-1:cds;Parent=Msa1074940-mRNA-1 |
| chr7_2 | CDS | 73014430 | 73014630 | 73014430 | ID=Msa1074940-mRNA-1:cds;Parent=Msa1074940-mRNA-1 |
| chr7_2 | CDS | 73014226 | 73014339 | 73014226 | ID=Msa1074940-mRNA-1:cds;Parent=Msa1074940-mRNA-1 |
| chr7_2 | CDS | 73013610 | 73013951 | 73013610 | ID=Msa1074940-mRNA-1:cds;Parent=Msa1074940-mRNA-1 |
| chr7_2 | three_prime_UTR | 73013187 | 73013609 | 73013187 | ID=Msa1074940-mRNA-1:three_prime_utr;Parent=Msa1074940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
