Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115790 | XP_003625192.1 | 97.042 | 710 | 21 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115790 | A2Q3E1 | 97.042 | 710 | 21 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1426 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074000 | Msa1115790 | 0.801039 | 1.086871e-48 | -8.615850e-47 |
| Msa0840020 | Msa1115790 | 0.804959 | 1.681418e-49 | -8.615850e-47 |
| Msa0122010 | Msa1115790 | 0.801091 | 1.060141e-48 | -8.615850e-47 |
| Msa1034900 | Msa1115790 | 0.837805 | 4.185786e-57 | -8.615850e-47 |
| Msa1074940 | Msa1115790 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
| Msa1115790 | Msa1162300 | 0.849081 | 4.066206e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115790 | MtrunA17_Chr7g0258101 | 97.042 | 710 | 21 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1426 |
| Msa1115790 | MtrunA17_Chr7g0225961 | 51.455 | 550 | 231 | 12 | 177 | 708 | 447 | 978 | 8.04e-174 | 523 |
| Msa1115790 | MtrunA17_Chr6g0459211 | 48.432 | 574 | 255 | 10 | 153 | 708 | 345 | 895 | 1.54e-166 | 501 |
| Msa1115790 | MtrunA17_Chr1g0187521 | 42.755 | 697 | 330 | 17 | 22 | 708 | 353 | 990 | 2.32e-162 | 494 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115790 | AT2G42320.2 | 62.500 | 568 | 174 | 10 | 142 | 708 | 139 | 668 | 0.0 | 727 |
| Msa1115790 | AT2G42320.1 | 62.500 | 568 | 174 | 10 | 142 | 708 | 139 | 668 | 0.0 | 727 |
| Msa1115790 | AT3G57780.4 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 674 |
| Msa1115790 | AT3G57780.1 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 674 |
| Msa1115790 | AT3G57780.2 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 674 |
| Msa1115790 | AT3G57780.3 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 674 |
| Msa1115790 | AT3G57780.5 | 58.296 | 446 | 160 | 6 | 123 | 568 | 116 | 535 | 1.41e-174 | 510 |
| Msa1115790 | AT3G01810.1 | 50.823 | 547 | 221 | 11 | 178 | 708 | 403 | 917 | 1.93e-168 | 508 |
| Msa1115790 | AT3G01810.3 | 50.823 | 547 | 221 | 11 | 178 | 708 | 403 | 917 | 1.93e-168 | 508 |
| Msa1115790 | AT3G01810.2 | 50.823 | 547 | 221 | 11 | 178 | 708 | 403 | 917 | 1.93e-168 | 508 |
| Msa1115790 | AT5G06930.2 | 43.966 | 696 | 309 | 12 | 17 | 706 | 102 | 722 | 7.19e-168 | 499 |
| Msa1115790 | AT5G06930.3 | 43.966 | 696 | 309 | 12 | 17 | 706 | 102 | 722 | 7.19e-168 | 499 |
| Msa1115790 | AT5G06930.1 | 43.966 | 696 | 309 | 12 | 17 | 706 | 102 | 722 | 7.19e-168 | 499 |
| Msa1115790 | AT2G42320.4 | 64.773 | 352 | 110 | 4 | 142 | 493 | 139 | 476 | 4.51e-165 | 484 |
| Msa1115790 | AT2G42320.3 | 64.773 | 352 | 110 | 4 | 142 | 493 | 139 | 476 | 4.51e-165 | 484 |
| Msa1115790 | AT5G43230.1 | 46.154 | 533 | 230 | 12 | 182 | 708 | 361 | 842 | 1.85e-146 | 448 |
Find 213 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGATTCAGGTTAACTTTC+TGG | 0.107816 | 7_3:-63320179 | Msa1115790:intron |
| AAAATGAATGTCAGGAATTT+AGG | 0.196472 | 7_3:-63317815 | Msa1115790:three_prime_UTR |
| TACTGTTTCTGGCCTTATTT+TGG | 0.209652 | 7_3:-63320319 | Msa1115790:CDS |
| TCAGTCTTTCATTGATTATA+CGG | 0.219799 | 7_3:-63318581 | Msa1115790:CDS |
| AATAAACAGACAAGATATTT+TGG | 0.219821 | 7_3:-63317761 | Msa1115790:three_prime_UTR |
| ATTGCCAAGAATACTGTTTC+TGG | 0.221335 | 7_3:-63320330 | Msa1115790:CDS |
| TTCTGTCCTGACGCGGTTCC+AGG | 0.227836 | 7_3:-63318531 | Msa1115790:CDS |
| CACCTGCGCGGCGCCTTTCT+AGG | 0.229152 | 7_3:-63320401 | Msa1115790:CDS |
| ACAACTGAAGCCGCGCTATA+AGG | 0.264224 | 7_3:+63318160 | None:intergenic |
| CCATTTCCTGATTTACCATT+TGG | 0.275012 | 7_3:+63320009 | None:intergenic |
| TTATTAAGGATGATGGATTT+AGG | 0.287768 | 7_3:-63317478 | Msa1115790:three_prime_UTR |
| GAAACGAAACGAAAAGAAAA+AGG | 0.294387 | 7_3:+63322764 | None:intergenic |
| TAGTAGTGAGAGTGTGTTTA+GGG | 0.298416 | 7_3:+63323094 | None:intergenic |
| TGATAATCACTCCACTGATT+TGG | 0.300525 | 7_3:-63321045 | Msa1115790:CDS |
| GAGATAATTTCACAAGCATT+TGG | 0.301700 | 7_3:-63320132 | Msa1115790:CDS |
| CCATGATTCGACTCTTTCTA+AGG | 0.303020 | 7_3:+63319936 | None:intergenic |
| TCATCGATATATGCTTATTA+AGG | 0.303343 | 7_3:-63317492 | Msa1115790:three_prime_UTR |
| TCTGAGAAGTTACAGACTTT+AGG | 0.316024 | 7_3:-63321391 | Msa1115790:five_prime_UTR |
| ATGATTTAGCAACCAAAATA+AGG | 0.316584 | 7_3:+63320307 | None:intergenic |
| GGTTAAGGAAATTGAAATCT+TGG | 0.322169 | 7_3:-63320655 | Msa1115790:CDS |
| ATCAACTACTTCGTGAAGTT+TGG | 0.328969 | 7_3:-63317895 | Msa1115790:CDS |
| ATTCTTTAATGCTACTCTTA+AGG | 0.333131 | 7_3:+63317669 | None:intergenic |
| CCCGCAGGAAACTTAAGCTT+TGG | 0.334169 | 7_3:-63319257 | Msa1115790:CDS |
| CCCACACTCATTTATCATTA+CGG | 0.334476 | 7_3:-63322896 | Msa1115790:five_prime_UTR |
| TCACAAGCATTTGGGAATTC+CGG | 0.335945 | 7_3:-63320123 | Msa1115790:CDS |
| ATTTCCTTAACCTCTATAAC+AGG | 0.338096 | 7_3:+63320666 | None:intergenic |
| CCCAACAGATTTATTTGAAC+AGG | 0.344331 | 7_3:+63319659 | None:intergenic |
| TCCACAATTGGATCTGATAT+TGG | 0.346515 | 7_3:+63319299 | None:intergenic |
| CGCGGTTCCAGGAGCTGTCT+TGG | 0.351188 | 7_3:-63318520 | Msa1115790:CDS |
| AAGGCCAGAAACAGTATTCT+TGG | 0.354379 | 7_3:+63320326 | None:intergenic |
| TTCATCCCTAGGGAAAATTA+AGG | 0.360437 | 7_3:-63317733 | Msa1115790:three_prime_UTR |
| CGATGTTCAATGCAATTCTT+CGG | 0.364445 | 7_3:-63319349 | Msa1115790:CDS |
| CAACTGAAGCCGCGCTATAA+GGG | 0.365290 | 7_3:+63318161 | None:intergenic |
| CTATCCATAAGCATGTCTTT+TGG | 0.365940 | 7_3:+63318723 | None:intergenic |
| GCTCCCAAAAGACATGCTTA+TGG | 0.367269 | 7_3:-63318727 | Msa1115790:CDS |
| GGTATCCCAAATGGTAAATC+AGG | 0.370404 | 7_3:-63320015 | Msa1115790:CDS |
| AAAACCTGTTATAGAGGTTA+AGG | 0.378511 | 7_3:-63320670 | Msa1115790:CDS |
| TGACCCAGCCAACCTCATAA+TGG | 0.379222 | 7_3:+63320089 | None:intergenic |
| ATGAGGTTGGCTGGGTCAAA+TGG | 0.379911 | 7_3:-63320084 | Msa1115790:CDS |
| CATTTCCTGATTTACCATTT+GGG | 0.383540 | 7_3:+63320010 | None:intergenic |
| TTCACGAAGTAGTTGATATC+TGG | 0.384114 | 7_3:+63317901 | None:intergenic |
| GATGTTCAATGCAATTCTTC+GGG | 0.387788 | 7_3:-63319348 | Msa1115790:CDS |
| AGTCCCATTATGAGGTTGGC+TGG | 0.390091 | 7_3:-63320093 | Msa1115790:CDS |
| ATGATGGATTTAGGAATTCA+TGG | 0.392575 | 7_3:-63317469 | Msa1115790:three_prime_UTR |
| AGATAATTTCACAAGCATTT+GGG | 0.392815 | 7_3:-63320131 | Msa1115790:CDS |
| TAAGGCAAACGTAAAGGTTC+CGG | 0.395508 | 7_3:+63319954 | None:intergenic |
| TCGTCGTTCTCACTGTTCTC+TGG | 0.395693 | 7_3:+63318816 | None:intergenic |
| CAAGCATACCTCTCCGTTCA+AGG | 0.396892 | 7_3:+63318494 | None:intergenic |
| GCTTTCATCTATCATTGATA+AGG | 0.398674 | 7_3:-63317999 | Msa1115790:CDS |
| AGTTCCTGCAAAAGTTTCTT+CGG | 0.400597 | 7_3:-63320715 | Msa1115790:CDS |
| GGAAGTCTGCATCACTGAAA+TGG | 0.412726 | 7_3:-63320041 | Msa1115790:CDS |
| TATATGCTTATTAAGGATGA+TGG | 0.415256 | 7_3:-63317485 | Msa1115790:three_prime_UTR |
| GACTCCTTACATGCAATCTT+CGG | 0.416368 | 7_3:-63319691 | Msa1115790:CDS |
| GACCCAGCCAACCTCATAAT+GGG | 0.418748 | 7_3:+63320090 | None:intergenic |
| AAACTGCAATCAAAGGTAAC+AGG | 0.421068 | 7_3:-63320825 | Msa1115790:CDS |
| CTTACATGCAATCTTCGGTT+GGG | 0.421290 | 7_3:-63319686 | Msa1115790:CDS |
| AGGTGAGGATGGTGCGGCTT+TGG | 0.421475 | 7_3:-63320553 | Msa1115790:CDS |
| AACTTCTCAGAATTGTGCTT+CGG | 0.421560 | 7_3:+63321403 | None:intergenic |
| GATTTAGGAATTCATGGCCT+TGG | 0.422108 | 7_3:-63317463 | Msa1115790:three_prime_UTR |
| CCAAATGGTAAATCAGGAAA+TGG | 0.422555 | 7_3:-63320009 | Msa1115790:CDS |
| TAAAAGTGCATACACAATCT+TGG | 0.427475 | 7_3:+63321438 | None:intergenic |
| CTCTGCTACATTGGCTGACG+AGG | 0.428027 | 7_3:+63318126 | None:intergenic |
| AACTTTCACTGGCTTAGTAT+TGG | 0.428733 | 7_3:+63320734 | None:intergenic |
| TGCAACTTTCTCTGCTACAT+TGG | 0.429376 | 7_3:+63318117 | None:intergenic |
| CTTAAGTTTCCTGCGGGAAT+CGG | 0.429998 | 7_3:+63319263 | None:intergenic |
| TTGAACTGCAGGTTGGCAAT+TGG | 0.431617 | 7_3:-63318896 | Msa1115790:intron |
| CCAACCGAAGATTGCATGTA+AGG | 0.438163 | 7_3:+63319687 | None:intergenic |
| AGAGTCTTTGAAAAGCATCT+TGG | 0.438876 | 7_3:+63319565 | None:intergenic |
| TTATGCAGACCGGTGAAGAT+TGG | 0.439100 | 7_3:-63319984 | Msa1115790:CDS |
| ATCTTGGATGGATCTTCTAA+TGG | 0.439235 | 7_3:-63320639 | Msa1115790:CDS |
| AAATTGTACGTTAAAATGAT+AGG | 0.439544 | 7_3:+63322986 | None:intergenic |
| CCTTAGAAAGAGTCGAATCA+TGG | 0.440461 | 7_3:-63319936 | Msa1115790:CDS |
| AAAACCTTTGAATCCACAAT+TGG | 0.442116 | 7_3:+63319287 | None:intergenic |
| GGATCTGATATTGGATCAGT+TGG | 0.442351 | 7_3:+63319308 | None:intergenic |
| AGATTGCTCACTGATATGTT+TGG | 0.443061 | 7_3:-63318870 | Msa1115790:CDS |
| TCCTGTTCAAATAAATCTGT+TGG | 0.444730 | 7_3:-63319660 | Msa1115790:CDS |
| TTAGTAGTGAGAGTGTGTTT+AGG | 0.446226 | 7_3:+63323093 | None:intergenic |
| AAGGCCTCCAAGACAGCTCC+TGG | 0.449202 | 7_3:+63318513 | None:intergenic |
| CATTGATGCTGAAGATTGTT+CGG | 0.456507 | 7_3:-63318847 | Msa1115790:CDS |
| AGCGTTTCTCCAGAGATTGA+TGG | 0.459672 | 7_3:+63319590 | None:intergenic |
| ACAGCTCCTGGAACCGCGTC+AGG | 0.460610 | 7_3:+63318525 | None:intergenic |
| GTAGCGACTGTTGGAGATGA+AGG | 0.463021 | 7_3:+63317974 | None:intergenic |
| AAATCTATAAACTCAAATAA+AGG | 0.465368 | 7_3:-63320789 | Msa1115790:CDS |
| CAGTCTTTCATTGATTATAC+GGG | 0.471953 | 7_3:-63318580 | Msa1115790:CDS |
| CATCTTGACAAATGCCTCCT+CGG | 0.474247 | 7_3:+63321085 | None:intergenic |
| TCTCCAACAGTCGCTACAAA+TGG | 0.474955 | 7_3:-63317968 | Msa1115790:CDS |
| GAAGGTCACTCAAGTCGTTA+AGG | 0.475334 | 7_3:+63318754 | None:intergenic |
| GGTCTCTTGCCAATCTTCAC+CGG | 0.476305 | 7_3:+63319975 | None:intergenic |
| GGGTCTGCCAAGAGGAATGA+TGG | 0.478703 | 7_3:-63320063 | Msa1115790:CDS |
| CCTGTTCAAATAAATCTGTT+GGG | 0.479247 | 7_3:-63319659 | Msa1115790:CDS |
| TTTCCATTTGTAGCGACTGT+TGG | 0.485899 | 7_3:+63317965 | None:intergenic |
| AGCCTAGAAAGGCGCCGCGC+AGG | 0.486438 | 7_3:+63320399 | None:intergenic |
| ACAGTCGCTACAAATGGAAA+TGG | 0.487763 | 7_3:-63317962 | Msa1115790:CDS |
| TAGAAAGCAATCGTGGATCA+AGG | 0.491210 | 7_3:-63320872 | Msa1115790:CDS |
| GCAGAGAAAGTTGCAGAGGC+AGG | 0.491674 | 7_3:-63318109 | Msa1115790:CDS |
| CAGCCGATACATTCCTCGTC+AGG | 0.491975 | 7_3:+63318074 | None:intergenic |
| ATATACATGCTTGTAAGCAT+TGG | 0.492208 | 7_3:-63320374 | Msa1115790:CDS |
| GGTTCCAGGAGCTGTCTTGG+AGG | 0.494180 | 7_3:-63318517 | Msa1115790:CDS |
| AAGGAAATTGAAATCTTGGA+TGG | 0.494656 | 7_3:-63320651 | Msa1115790:CDS |
| AAATCTGTTGGGAGGCTGCT+AGG | 0.495687 | 7_3:-63319648 | Msa1115790:CDS |
| CCTTACATGCAATCTTCGGT+TGG | 0.498736 | 7_3:-63319687 | Msa1115790:CDS |
| CTCTGTCCTCTTCGAGCAGG+AGG | 0.499854 | 7_3:-63319546 | Msa1115790:CDS |
| AGATCCAATTGTGGATTCAA+AGG | 0.501615 | 7_3:-63319291 | Msa1115790:CDS |
| AAATGGAAAGGTATCCCAAA+TGG | 0.503103 | 7_3:-63320024 | Msa1115790:CDS |
| TTGAGATGATAATGAATCCT+TGG | 0.504553 | 7_3:+63320974 | None:intergenic |
| AGTAGAGTCGGTGTGGTGGC+AGG | 0.505247 | 7_3:-63319899 | Msa1115790:intron |
| CATGCGGTAATGATGTTTCA+AGG | 0.509862 | 7_3:-63320287 | Msa1115790:intron |
| GTAAGCATTGGACCCCGAAA+AGG | 0.511380 | 7_3:-63320362 | Msa1115790:CDS |
| TTGCTCTTTCTCCAAATCAG+TGG | 0.511690 | 7_3:+63321034 | None:intergenic |
| GGAAACTTAAGCTTTGGATC+TGG | 0.513114 | 7_3:-63319251 | Msa1115790:CDS |
| TGTGCTGAGCTACCATGCTC+TGG | 0.514422 | 7_3:+63320435 | None:intergenic |
| GTAGTGAGAGTGTGTTTAGG+GGG | 0.515035 | 7_3:+63323096 | None:intergenic |
| TACCCTACCCGTGTTTCTTG+TGG | 0.519147 | 7_3:-63322949 | Msa1115790:five_prime_UTR |
| AGACTTCCCATCATTCCTCT+TGG | 0.520311 | 7_3:+63320056 | None:intergenic |
| TGAGGTTGGCTGGGTCAAAT+GGG | 0.521117 | 7_3:-63320083 | Msa1115790:CDS |
| GTCCCATTATGAGGTTGGCT+GGG | 0.521850 | 7_3:-63320092 | Msa1115790:CDS |
| TTATCAAACAAACACGAAGA+AGG | 0.521915 | 7_3:+63317627 | None:intergenic |
| AACAAATAAACTGCAATCAA+AGG | 0.522793 | 7_3:-63320832 | Msa1115790:CDS |
| TTACATGCAATCTTCGGTTG+GGG | 0.524263 | 7_3:-63319685 | Msa1115790:CDS |
| GTTTCTTCGGAATCTTCTGA+AGG | 0.525949 | 7_3:-63320702 | Msa1115790:CDS |
| TTTGCCTGCGATGGCAAGAA+TGG | 0.527794 | 7_3:-63319508 | Msa1115790:intron |
| GTGTGGTTGTTTGCCTGCGA+TGG | 0.527869 | 7_3:-63319517 | Msa1115790:CDS |
| GTCAAGTCAGTCCCATTATG+AGG | 0.532212 | 7_3:-63320101 | Msa1115790:CDS |
| TCTTTCTAAGGCAAACGTAA+AGG | 0.535183 | 7_3:+63319948 | None:intergenic |
| TAGTTGATATCTGGCATTTG+TGG | 0.536534 | 7_3:+63317910 | None:intergenic |
| AGGCTGCTAGGACCTGCTCT+AGG | 0.537769 | 7_3:-63319636 | Msa1115790:CDS |
| CATACCATTCTTGCCATCGC+AGG | 0.538491 | 7_3:+63319504 | None:intergenic |
| AGACTCTGTCCTCTTCGAGC+AGG | 0.539604 | 7_3:-63319549 | Msa1115790:CDS |
| CATAATGGGACTGACTTGAC+CGG | 0.541186 | 7_3:+63320104 | None:intergenic |
| TATAATCAATGAAAGACTGA+TGG | 0.542526 | 7_3:+63318584 | None:intergenic |
| CCAAAGCTTAAGTTTCCTGC+GGG | 0.543212 | 7_3:+63319257 | None:intergenic |
| CCGTAATGATAAATGAGTGT+GGG | 0.543630 | 7_3:+63322896 | None:intergenic |
| TTTGGAATTCTTCATCCCTA+GGG | 0.543710 | 7_3:-63317743 | Msa1115790:three_prime_UTR |
| ATTGTTAATGCTGAAGAAAA+CGG | 0.544073 | 7_3:-63320579 | Msa1115790:CDS |
| TTGATATCTGGCATTTGTGG+TGG | 0.552983 | 7_3:+63317913 | None:intergenic |
| GCGTCAGGACAGAACTCATC+CGG | 0.556096 | 7_3:+63318540 | None:intergenic |
| AATTCTTCGGGAATCAGCCT+TGG | 0.558985 | 7_3:-63319336 | Msa1115790:CDS |
| GATCTGATATTGGATCAGTT+GGG | 0.559567 | 7_3:+63319309 | None:intergenic |
| GGTGAAGATTGGCAAGAGAC+CGG | 0.563020 | 7_3:-63319973 | Msa1115790:CDS |
| GCATCAGAATACGACATTGG+AGG | 0.563961 | 7_3:-63317535 | Msa1115790:three_prime_UTR |
| CATGTATATAGAGCCTAGAA+AGG | 0.566272 | 7_3:+63320388 | None:intergenic |
| AAGAATTGAAAATCTTGAAG+AGG | 0.566537 | 7_3:-63320505 | Msa1115790:CDS |
| GCTGTCTTGGAGGCCTTGAA+CGG | 0.568733 | 7_3:-63318507 | Msa1115790:CDS |
| TATTCTATTGTACCAGAGCA+TGG | 0.572688 | 7_3:-63320447 | Msa1115790:CDS |
| GCTCTAGGTGATCACAATCA+AGG | 0.578230 | 7_3:-63319621 | Msa1115790:CDS |
| AGTCAGTCCCATTATGAGGT+TGG | 0.581356 | 7_3:-63320097 | Msa1115790:CDS |
| ATCAATGAAAGACTGATGGA+TGG | 0.583203 | 7_3:+63318588 | None:intergenic |
| AACCACAAGAAACACGGGTA+GGG | 0.583440 | 7_3:+63322947 | None:intergenic |
| TTCACAAGTTACACATCACA+TGG | 0.583442 | 7_3:+63317871 | None:intergenic |
| AAGGATTCATTATCATCTCA+AGG | 0.584015 | 7_3:-63320972 | Msa1115790:CDS |
| TGATTGTGATCACCTAGAGC+AGG | 0.586194 | 7_3:+63319624 | None:intergenic |
| AGAACAGTGAGAACGACGAA+AGG | 0.586884 | 7_3:-63318812 | Msa1115790:CDS |
| TACTAGTGATGAAGAACTTG+AGG | 0.587655 | 7_3:-63318035 | Msa1115790:CDS |
| AGAAAGCAATCGTGGATCAA+GGG | 0.587886 | 7_3:-63320871 | Msa1115790:CDS |
| TTTGATTAAAATATGTACCA+AGG | 0.590671 | 7_3:+63317446 | None:intergenic |
| GGCTAGTAGAGTCGGTGTGG+TGG | 0.590826 | 7_3:-63319903 | Msa1115790:CDS |
| AATGGTAATCACAAAGAGCA+AGG | 0.592592 | 7_3:-63317944 | Msa1115790:CDS |
| TCACCTGACGAGGAATGTAT+CGG | 0.594195 | 7_3:-63318077 | Msa1115790:CDS |
| GAGGAAAGTGTCACCTGACG+AGG | 0.594475 | 7_3:-63318087 | Msa1115790:CDS |
| CGAGCAGGAGGGCACGAGTG+TGG | 0.595415 | 7_3:-63319534 | Msa1115790:CDS |
| GGAACTAACCACAAGAAACA+CGG | 0.597003 | 7_3:+63322941 | None:intergenic |
| TCTAATGGCGCTCAAAGTGT+AGG | 0.597901 | 7_3:-63320624 | Msa1115790:CDS |
| TCTGCTACATTGGCTGACGA+GGG | 0.600529 | 7_3:+63318127 | None:intergenic |
| TGTAGCAGAGAAAGTTGCAG+AGG | 0.600894 | 7_3:-63318113 | Msa1115790:CDS |
| AACAGTTAAACACGTTACGT+TGG | 0.601717 | 7_3:+63322920 | None:intergenic |
| TATGGATAGAAAAGTCAGCC+AGG | 0.602467 | 7_3:-63318709 | Msa1115790:CDS |
| GGTCTGCCAAGAGGAATGAT+GGG | 0.603431 | 7_3:-63320062 | Msa1115790:CDS |
| TAATGAATCCTTGGTTGTAT+CGG | 0.604817 | 7_3:+63320983 | None:intergenic |
| TCTGCATCACTGAAATGGAA+AGG | 0.604858 | 7_3:-63320036 | Msa1115790:CDS |
| GAGAGAAGTTGCTGCTCTCG+AGG | 0.605091 | 7_3:-63320478 | Msa1115790:CDS |
| CGGTGAAGGTGAGGATGGTG+CGG | 0.605535 | 7_3:-63320559 | Msa1115790:CDS |
| TCGTGCCCTCCTGCTCGAAG+AGG | 0.606373 | 7_3:+63319540 | None:intergenic |
| TCCAATATCAGATCCAATTG+TGG | 0.607623 | 7_3:-63319300 | Msa1115790:CDS |
| AGTAGTGAGAGTGTGTTTAG+GGG | 0.612474 | 7_3:+63323095 | None:intergenic |
| GCTATAAGGGAAGCTTCTAA+CGG | 0.615196 | 7_3:+63318174 | None:intergenic |
| GCTACATTGGCTGACGAGGG+AGG | 0.618324 | 7_3:+63318130 | None:intergenic |
| CGTAATGATAAATGAGTGTG+GGG | 0.620380 | 7_3:+63322897 | None:intergenic |
| AATTATCTCTCTCAGAACAA+TGG | 0.623116 | 7_3:+63320146 | None:intergenic |
| CTCGGCTAGTAGAGTCGGTG+TGG | 0.624389 | 7_3:-63319906 | Msa1115790:CDS |
| TCCAAAGCTTAAGTTTCCTG+CGG | 0.624548 | 7_3:+63319256 | None:intergenic |
| GCATGGTAGCTCAGCACACA+AGG | 0.626811 | 7_3:-63320430 | Msa1115790:CDS |
| TAAGCATCAGAATACGACAT+TGG | 0.627866 | 7_3:-63317538 | Msa1115790:three_prime_UTR |
| GAGAAAGTTGCAGAGGCAGG+AGG | 0.628672 | 7_3:-63318106 | Msa1115790:CDS |
| AATTCTTTAGAAAGCAATCG+TGG | 0.631921 | 7_3:-63320879 | Msa1115790:CDS |
| GAAAACGGTGAAGGTGAGGA+TGG | 0.639739 | 7_3:-63320564 | Msa1115790:CDS |
| GGAATGTATCGGCTGTTCAG+CGG | 0.639948 | 7_3:-63318066 | Msa1115790:CDS |
| TCTGTCCTCTTCGAGCAGGA+GGG | 0.641785 | 7_3:-63319545 | Msa1115790:CDS |
| ATGGTAATCACAAAGAGCAA+GGG | 0.648700 | 7_3:-63317943 | Msa1115790:CDS |
| GACAAGACAGAAGAGAGAAG+AGG | 0.649310 | 7_3:+63322786 | None:intergenic |
| CAGACTTTAGGAGCTTGCCA+AGG | 0.651665 | 7_3:-63321379 | Msa1115790:intron |
| GGTCAAATGGGTCTGCCAAG+AGG | 0.653307 | 7_3:-63320071 | Msa1115790:CDS |
| TAACCACAAGAAACACGGGT+AGG | 0.653894 | 7_3:+63322946 | None:intergenic |
| GAACTAACCACAAGAAACAC+GGG | 0.655458 | 7_3:+63322942 | None:intergenic |
| ACCGTAATGATAAATGAGTG+TGG | 0.658409 | 7_3:+63322895 | None:intergenic |
| TAGAAGCTTCCCTTATAGCG+CGG | 0.662446 | 7_3:-63318170 | Msa1115790:CDS |
| GGTTCTCTGTAACTTCACTC+CGG | 0.666443 | 7_3:-63318559 | Msa1115790:CDS |
| GTATCGGCTGTTCAGCGGAG+AGG | 0.668187 | 7_3:-63318061 | Msa1115790:CDS |
| GAGAACGACGAAAGGCGAGG+TGG | 0.669891 | 7_3:-63318804 | Msa1115790:CDS |
| GGATGATGTCAACAGGTCCG+AGG | 0.673674 | 7_3:-63321102 | Msa1115790:intron |
| TGGATCAGTTGGGATCTCCA+AGG | 0.674303 | 7_3:+63319319 | None:intergenic |
| ACAACACATTACTAATCCCG+AGG | 0.675280 | 7_3:-63323035 | Msa1115790:five_prime_UTR |
| GTTCAAATAAATCTGTTGGG+AGG | 0.678740 | 7_3:-63319656 | Msa1115790:CDS |
| TGATGTCAACAGGTCCGAGG+AGG | 0.681847 | 7_3:-63321099 | Msa1115790:intron |
| AGTGAGAACGACGAAAGGCG+AGG | 0.682233 | 7_3:-63318807 | Msa1115790:CDS |
| CTTGGAGGCCTTGAACGGAG+AGG | 0.685220 | 7_3:-63318502 | Msa1115790:intron |
| TTATCAATGATAGATGAAAG+CGG | 0.690703 | 7_3:+63318001 | None:intergenic |
| GGATGAGTTCTGTCCTGACG+CGG | 0.692057 | 7_3:-63318538 | Msa1115790:CDS |
| TGAAGAAAACGGTGAAGGTG+AGG | 0.702094 | 7_3:-63320568 | Msa1115790:CDS |
| AATGCTGAAGAAAACGGTGA+AGG | 0.708600 | 7_3:-63320573 | Msa1115790:CDS |
| TGTGGAGCGAAGAATGTCAG+CGG | 0.711706 | 7_3:-63318200 | Msa1115790:CDS |
| ACAAGGTTCACACACCTGCG+CGG | 0.727930 | 7_3:-63320413 | Msa1115790:CDS |
| ATACGACACCGATACAACCA+AGG | 0.730986 | 7_3:-63320991 | Msa1115790:CDS |
| GGATAGAAAAGTCAGCCAGG+AGG | 0.755346 | 7_3:-63318706 | Msa1115790:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAAAAAAAAATAATT+GGG | - | chr7_3:63320681-63320700 | Msa1115790:CDS | 0.0% |
| !!! | AGTTTTTTTTTTTTTTTTGA+AGG | - | chr7_3:63318213-63318232 | Msa1115790:intron | 10.0% |
| !! | ATAAGAATATTGAAAATTAT+TGG | - | chr7_3:63318269-63318288 | Msa1115790:intron | 10.0% |
| !! | AATAAAATAAAAAAATCTGA+TGG | + | chr7_3:63318422-63318441 | None:intergenic | 10.0% |
| !! | GAAAATTTGAATTTATAATT+TGG | - | chr7_3:63321386-63321405 | Msa1115790:five_prime_UTR | 10.0% |
| !! | TTAGTCAAAAGTTAATTAAA+AGG | - | chr7_3:63318160-63318179 | Msa1115790:CDS | 15.0% |
| !! | AATTTGAGAAAATGAAATAA+TGG | + | chr7_3:63318531-63318550 | None:intergenic | 15.0% |
| !! | AAATCTATAAACTCAAATAA+AGG | - | chr7_3:63319742-63319761 | Msa1115790:intron | 15.0% |
| !! | TCATAAATTAAATACTTATG+TGG | - | chr7_3:63321854-63321873 | Msa1115790:intron | 15.0% |
| !!! | GTTTATTTTTATTATTATGC+AGG | - | chr7_3:63321915-63321934 | Msa1115790:intron | 15.0% |
| !!! | ATTTTATCTTTAGATTATTG+TGG | - | chr7_3:63322313-63322332 | Msa1115790:intron | 15.0% |
| !! | ATTCAGAAGATTAAAAAATA+TGG | - | chr7_3:63322747-63322766 | Msa1115790:intron | 15.0% |
| !! | AAATTGTACGTTAAAATGAT+AGG | + | chr7_3:63317548-63317567 | None:intergenic | 20.0% |
| !! | GGAAACAAAATTAAAGAAAA+AGG | + | chr7_3:63317895-63317914 | None:intergenic | 20.0% |
| !! | AATTAAAGTACGAAATGAAA+TGG | + | chr7_3:63318035-63318054 | None:intergenic | 20.0% |
| !! | TAAATTAAGATCTAGGAATT+AGG | + | chr7_3:63318124-63318143 | None:intergenic | 20.0% |
| !! | AAAATAAAAAAATCTGATGG+TGG | + | chr7_3:63318419-63318438 | None:intergenic | 20.0% |
| !! | TTAATTTCACTACTTAAGAT+TGG | - | chr7_3:63318607-63318626 | Msa1115790:intron | 20.0% |
| !!! | GTCCAATTTTTTTTTTATAC+TGG | - | chr7_3:63318777-63318796 | Msa1115790:CDS | 20.0% |
| !!! | CTTTATGGTTTTTCATTTTT+TGG | - | chr7_3:63318876-63318895 | Msa1115790:CDS | 20.0% |
| !!! | TCATATCTCTTGAATTTTAT+TGG | - | chr7_3:63318950-63318969 | Msa1115790:intron | 20.0% |
| !!! | ATAAGTTTCTGAATTTTCTA+AGG | + | chr7_3:63319388-63319407 | None:intergenic | 20.0% |
| !! | GGAATCAAAAATTAAAGAAA+TGG | - | chr7_3:63319999-63320018 | Msa1115790:CDS | 20.0% |
| !! | TAAAAAAAAATAATTGGGGA+AGG | - | chr7_3:63320686-63320705 | Msa1115790:CDS | 20.0% |
| !! | AAAAAAAAATAATTGGGGAA+GGG | - | chr7_3:63320687-63320706 | Msa1115790:CDS | 20.0% |
| !!! | CTTTTTGTTTTTATACTGAT+CGG | - | chr7_3:63321334-63321353 | Msa1115790:intron | 20.0% |
| !! | AAACTTGATATAACTACAAA+TGG | - | chr7_3:63321492-63321511 | Msa1115790:intron | 20.0% |
| !!! | TTTGTCATATAATTGATTTG+AGG | - | chr7_3:63321533-63321552 | Msa1115790:intron | 20.0% |
| !! | ATAAATACAATGACAATGTA+AGG | + | chr7_3:63321891-63321910 | None:intergenic | 20.0% |
| !!! | CATTGTCATTGTATTTATTT+TGG | - | chr7_3:63321893-63321912 | Msa1115790:intron | 20.0% |
| !! | TGAAATTAAAATTGCAGTAA+AGG | + | chr7_3:63322223-63322242 | None:intergenic | 20.0% |
| !!! | AATAAACAGACAAGATATTT+TGG | - | chr7_3:63322770-63322789 | Msa1115790:five_prime_UTR | 20.0% |
| !! | TATTTATATACACCCAAAAA+AGG | + | chr7_3:63322837-63322856 | None:intergenic | 20.0% |
| !! | TTTGATTAAAATATGTACCA+AGG | + | chr7_3:63323088-63323107 | None:intergenic | 20.0% |
| ! | GAAAGAAAATAGTAGTGATA+GGG | + | chr7_3:63317873-63317892 | None:intergenic | 25.0% |
| ! | AACAAATTGTGTTAATGTAG+CGG | - | chr7_3:63318078-63318097 | Msa1115790:CDS | 25.0% |
| ! | GAATGGTTAAATTAAGATCT+AGG | + | chr7_3:63318131-63318150 | None:intergenic | 25.0% |
| !!! | AACTTTTGACTAAATCAACA+AGG | + | chr7_3:63318153-63318172 | None:intergenic | 25.0% |
| ! | TTGTTCACAAATATAATGAG+TGG | - | chr7_3:63318453-63318472 | Msa1115790:intron | 25.0% |
| ! | TACTACATAGATTGTATGTT+TGG | - | chr7_3:63318566-63318585 | Msa1115790:CDS | 25.0% |
| !! | TTGTATGTTTGGTTCATTAT+AGG | - | chr7_3:63318577-63318596 | Msa1115790:CDS | 25.0% |
| ! | GGCCAGTATAAAAAAAAAAT+TGG | + | chr7_3:63318782-63318801 | None:intergenic | 25.0% |
| ! | AGAAAAAATCAAGAAAAGCA+TGG | + | chr7_3:63318979-63318998 | None:intergenic | 25.0% |
| !!! | TTTAAGCACTATATTTTTGC+AGG | - | chr7_3:63319029-63319048 | Msa1115790:intron | 25.0% |
| ! | AAAAGAAACTGAATCTAAGA+CGG | - | chr7_3:63319362-63319381 | Msa1115790:CDS | 25.0% |
| ! | GAAAATCTAGTTACATTATG+TGG | - | chr7_3:63319408-63319427 | Msa1115790:intron | 25.0% |
| ! | TTCAAAAGATCCAAAAAGTA+AGG | - | chr7_3:63319621-63319640 | Msa1115790:CDS | 25.0% |
| ! | AACAAATAAACTGCAATCAA+AGG | - | chr7_3:63319699-63319718 | Msa1115790:CDS | 25.0% |
| ! | ATTGTTAATGCTGAAGAAAA+CGG | - | chr7_3:63319952-63319971 | Msa1115790:CDS | 25.0% |
| ! | AAGAATTGAAAATCTTGAAG+AGG | - | chr7_3:63320026-63320045 | Msa1115790:CDS | 25.0% |
| ! | ATGATTTAGCAACCAAAATA+AGG | + | chr7_3:63320227-63320246 | None:intergenic | 25.0% |
| ! | AGATAATTTCACAAGCATTT+GGG | - | chr7_3:63320400-63320419 | Msa1115790:CDS | 25.0% |
| ! | AAAAAAAATAATTGGGGAAG+GGG | - | chr7_3:63320688-63320707 | Msa1115790:CDS | 25.0% |
| !! | TATTTTACAATCATCCTGAA+GGG | - | chr7_3:63320750-63320769 | Msa1115790:CDS | 25.0% |
| ! | ACTAAAAACATAATCAAGCA+AGG | + | chr7_3:63321070-63321089 | None:intergenic | 25.0% |
| ! | TAGATTAAAATTCATTCACC+AGG | - | chr7_3:63321126-63321145 | Msa1115790:intron | 25.0% |
| ! | TTCATAGATACTGTAAAGAA+TGG | + | chr7_3:63321460-63321479 | None:intergenic | 25.0% |
| !!! | AAATGGATTAGCAAAATATG+CGG | - | chr7_3:63321509-63321528 | Msa1115790:intron | 25.0% |
| ! | AATTTATGAAATTAACCTCC+TGG | + | chr7_3:63321843-63321862 | None:intergenic | 25.0% |
| ! | TATAATCAATGAAAGACTGA+TGG | + | chr7_3:63321950-63321969 | None:intergenic | 25.0% |
| !! | TCAGTCTTTCATTGATTATA+CGG | - | chr7_3:63321950-63321969 | Msa1115790:intron | 25.0% |
| !!! | ACTGCAATTTTAATTTCACT+TGG | - | chr7_3:63322225-63322244 | Msa1115790:intron | 25.0% |
| ! | TTATCAATGATAGATGAAAG+CGG | + | chr7_3:63322533-63322552 | None:intergenic | 25.0% |
| ! | CTAAAGTAAAAATGAATGTC+AGG | - | chr7_3:63322708-63322727 | Msa1115790:intron | 25.0% |
| ! | AAAATGAATGTCAGGAATTT+AGG | - | chr7_3:63322716-63322735 | Msa1115790:intron | 25.0% |
| ! | ATTCTTTAATGCTACTCTTA+AGG | + | chr7_3:63322865-63322884 | None:intergenic | 25.0% |
| ! | TCATCGATATATGCTTATTA+AGG | - | chr7_3:63323039-63323058 | Msa1115790:five_prime_UTR | 25.0% |
| ! | TATATGCTTATTAAGGATGA+TGG | - | chr7_3:63323046-63323065 | Msa1115790:five_prime_UTR | 25.0% |
| !!! | TTATTAAGGATGATGGATTT+AGG | - | chr7_3:63323053-63323072 | Msa1115790:five_prime_UTR | 25.0% |
| GAAACGAAACGAAAAGAAAA+AGG | + | chr7_3:63317770-63317789 | None:intergenic | 30.0% | |
| GGAAAGAAAATAGTAGTGAT+AGG | + | chr7_3:63317874-63317893 | None:intergenic | 30.0% | |
| TTGACTAAATCAACAAGGAA+TGG | + | chr7_3:63318148-63318167 | None:intergenic | 30.0% | |
| !! | TGATTTGATGATGATGTTGA+CGG | - | chr7_3:63318330-63318349 | Msa1115790:intron | 30.0% |
| CACAAATATAATGAGTGGTA+TGG | - | chr7_3:63318458-63318477 | Msa1115790:intron | 30.0% | |
| CAAAATGTGTACACAACAAA+TGG | + | chr7_3:63318708-63318727 | None:intergenic | 30.0% | |
| TTAACCCCACTTTCTAATTA+AGG | - | chr7_3:63318742-63318761 | Msa1115790:CDS | 30.0% | |
| AAGACCTTAATTAGAAAGTG+GGG | + | chr7_3:63318749-63318768 | None:intergenic | 30.0% | |
| GAAGACCTTAATTAGAAAGT+GGG | + | chr7_3:63318750-63318769 | None:intergenic | 30.0% | |
| TGAAGACCTTAATTAGAAAG+TGG | + | chr7_3:63318751-63318770 | None:intergenic | 30.0% | |
| ATCAATTGCAACAGAAAGAA+GGG | + | chr7_3:63318823-63318842 | None:intergenic | 30.0% | |
| AATCAATTGCAACAGAAAGA+AGG | + | chr7_3:63318824-63318843 | None:intergenic | 30.0% | |
| ATCACAATGAGAATCAAAAC+AGG | + | chr7_3:63318902-63318921 | None:intergenic | 30.0% | |
| TTGATTCTCATTGTGATGAA+TGG | - | chr7_3:63318905-63318924 | Msa1115790:intron | 30.0% | |
| ! | TAAAAGTGCATACACAATCT+TGG | + | chr7_3:63319096-63319115 | None:intergenic | 30.0% |
| ! | TTGTGTATGCACTTTTATGT+TGG | - | chr7_3:63319099-63319118 | Msa1115790:intron | 30.0% |
| ATGATAGGATTTACTAACCT+TGG | + | chr7_3:63319172-63319191 | None:intergenic | 30.0% | |
| TGAAAGAAATTGAGAAGAGA+AGG | - | chr7_3:63319247-63319266 | Msa1115790:CDS | 30.0% | |
| GAAAGAAATTGAGAAGAGAA+GGG | - | chr7_3:63319248-63319267 | Msa1115790:CDS | 30.0% | |
| AAAGAAATTGAGAAGAGAAG+GGG | - | chr7_3:63319249-63319268 | Msa1115790:CDS | 30.0% | |
| AGAGTTCAAAAAGAACAGAA+AGG | - | chr7_3:63319292-63319311 | Msa1115790:CDS | 30.0% | |
| TAATGAATCCTTGGTTGTAT+CGG | + | chr7_3:63319551-63319570 | None:intergenic | 30.0% | |
| ! | TTGAGATGATAATGAATCCT+TGG | + | chr7_3:63319560-63319579 | None:intergenic | 30.0% |
| AAGGATTCATTATCATCTCA+AGG | - | chr7_3:63319559-63319578 | Msa1115790:CDS | 30.0% | |
| ! | AATTCTTTAGAAAGCAATCG+TGG | - | chr7_3:63319652-63319671 | Msa1115790:CDS | 30.0% |
| TGATGAAAAACCTGTTATAG+AGG | - | chr7_3:63319855-63319874 | Msa1115790:intron | 30.0% | |
| AAAACCTGTTATAGAGGTTA+AGG | - | chr7_3:63319861-63319880 | Msa1115790:intron | 30.0% | |
| ATTTCCTTAACCTCTATAAC+AGG | + | chr7_3:63319868-63319887 | None:intergenic | 30.0% | |
| GGTTAAGGAAATTGAAATCT+TGG | - | chr7_3:63319876-63319895 | Msa1115790:intron | 30.0% | |
| AAGGAAATTGAAATCTTGGA+TGG | - | chr7_3:63319880-63319899 | Msa1115790:intron | 30.0% | |
| ATATACATGCTTGTAAGCAT+TGG | - | chr7_3:63320157-63320176 | Msa1115790:CDS | 30.0% | |
| !!! | ATTTTGGTTGCTAAATCATG+CGG | - | chr7_3:63320228-63320247 | Msa1115790:intron | 30.0% |
| AATTATCTCTCTCAGAACAA+TGG | + | chr7_3:63320388-63320407 | None:intergenic | 30.0% | |
| GAGATAATTTCACAAGCATT+TGG | - | chr7_3:63320399-63320418 | Msa1115790:CDS | 30.0% | |
| CATTTCCTGATTTACCATTT+GGG | + | chr7_3:63320524-63320543 | None:intergenic | 30.0% | |
| ! | CTATTTTACAATCATCCTGA+AGG | - | chr7_3:63320749-63320768 | Msa1115790:CDS | 30.0% |
| TCCTGTTCAAATAAATCTGT+TGG | - | chr7_3:63320871-63320890 | Msa1115790:CDS | 30.0% | |
| CCTGTTCAAATAAATCTGTT+GGG | - | chr7_3:63320872-63320891 | Msa1115790:CDS | 30.0% | |
| TTAATCTACTCAATCCTTTG+AGG | + | chr7_3:63321114-63321133 | None:intergenic | 30.0% | |
| AAAACCTTTGAATCCACAAT+TGG | + | chr7_3:63321247-63321266 | None:intergenic | 30.0% | |
| !! | TATAATTGATTTGAGGCATG+TGG | - | chr7_3:63321540-63321559 | Msa1115790:intron | 30.0% |
| TAACTCTTCCATAAGCATAA+AGG | + | chr7_3:63321614-63321633 | None:intergenic | 30.0% | |
| ! | TATCCATAAGCATGTCTTTT+GGG | + | chr7_3:63321810-63321829 | None:intergenic | 30.0% |
| ! | CAGTCTTTCATTGATTATAC+GGG | - | chr7_3:63321951-63321970 | Msa1115790:intron | 30.0% |
| ! | ATTTTTCTTGTCTGTTACGA+AGG | - | chr7_3:63322062-63322081 | Msa1115790:intron | 30.0% |
| ! | TTCTCCACTAATGATAATGT+TGG | - | chr7_3:63322107-63322126 | Msa1115790:intron | 30.0% |
| ! | GAAGTATTCTGAATCTGAAA+TGG | - | chr7_3:63322190-63322209 | Msa1115790:intron | 30.0% |
| ATTTCACTTGGCACATATTT+CGG | - | chr7_3:63322237-63322256 | Msa1115790:intron | 30.0% | |
| GCTTTCATCTATCATTGATA+AGG | - | chr7_3:63322532-63322551 | Msa1115790:intron | 30.0% | |
| !!! | TCAATTTCCCTTCCTTTTTT+GGG | - | chr7_3:63322822-63322841 | Msa1115790:five_prime_UTR | 30.0% |
| ATATACACCCAAAAAAGGAA+GGG | + | chr7_3:63322832-63322851 | None:intergenic | 30.0% | |
| TATATACACCCAAAAAAGGA+AGG | + | chr7_3:63322833-63322852 | None:intergenic | 30.0% | |
| TTATCAAACAAACACGAAGA+AGG | + | chr7_3:63322907-63322926 | None:intergenic | 30.0% | |
| ! | GTGTACAAACTTCTTTTACA+AGG | - | chr7_3:63322968-63322987 | Msa1115790:five_prime_UTR | 30.0% |
| !! | ATGATGGATTTAGGAATTCA+TGG | - | chr7_3:63323062-63323081 | Msa1115790:five_prime_UTR | 30.0% |
| ! | TAGTAGTGAGAGTGTGTTTA+GGG | + | chr7_3:63317440-63317459 | None:intergenic | 35.0% |
| ! | TTAGTAGTGAGAGTGTGTTT+AGG | + | chr7_3:63317441-63317460 | None:intergenic | 35.0% |
| !!! | TCGTTCTGTGTTTTTTGTAG+TGG | + | chr7_3:63317471-63317490 | None:intergenic | 35.0% |
| AGAGAAAAAGAGAAATCCTC+GGG | + | chr7_3:63317515-63317534 | None:intergenic | 35.0% | |
| CAGAGAAAAAGAGAAATCCT+CGG | + | chr7_3:63317516-63317535 | None:intergenic | 35.0% | |
| AACAGTTAAACACGTTACGT+TGG | + | chr7_3:63317614-63317633 | None:intergenic | 35.0% | |
| CGTAATGATAAATGAGTGTG+GGG | + | chr7_3:63317637-63317656 | None:intergenic | 35.0% | |
| CCGTAATGATAAATGAGTGT+GGG | + | chr7_3:63317638-63317657 | None:intergenic | 35.0% | |
| CCCACACTCATTTATCATTA+CGG | - | chr7_3:63317635-63317654 | Msa1115790:three_prime_UTR | 35.0% | |
| ACCGTAATGATAAATGAGTG+TGG | + | chr7_3:63317639-63317658 | None:intergenic | 35.0% | |
| GTAGTACATACAAACAGAGA+AGG | + | chr7_3:63317916-63317935 | None:intergenic | 35.0% | |
| GGAAAATGAAGTTACGTAGA+AGG | + | chr7_3:63318008-63318027 | None:intergenic | 35.0% | |
| AGTACGAAATGAAATGGAGA+TGG | + | chr7_3:63318029-63318048 | None:intergenic | 35.0% | |
| TTTCTTCATACTCTACTGCT+AGG | - | chr7_3:63318369-63318388 | Msa1115790:intron | 35.0% | |
| !! | AAAAATCTGATGGTGGAGTA+GGG | + | chr7_3:63318412-63318431 | None:intergenic | 35.0% |
| !! | AAAAAATCTGATGGTGGAGT+AGG | + | chr7_3:63318413-63318432 | None:intergenic | 35.0% |
| !! | CACACAATTCTGGTTCAATT+AGG | + | chr7_3:63318635-63318654 | None:intergenic | 35.0% |
| AGTCATTTGACACACAATTC+TGG | + | chr7_3:63318645-63318664 | None:intergenic | 35.0% | |
| ! | TACTGGCCTGAAATTTAATC+TGG | - | chr7_3:63318794-63318813 | Msa1115790:CDS | 35.0% |
| TTCTGCACTTGTCTTCTTTA+TGG | - | chr7_3:63318861-63318880 | Msa1115790:CDS | 35.0% | |
| TCTCATTGTGATGAATGGTT+TGG | - | chr7_3:63318910-63318929 | Msa1115790:intron | 35.0% | |
| !! | CACTATATTTTTGCAGGTAG+TGG | - | chr7_3:63319035-63319054 | Msa1115790:intron | 35.0% |
| AACTTCTCAGAATTGTGCTT+CGG | + | chr7_3:63319131-63319150 | None:intergenic | 35.0% | |
| TCTGAGAAGTTACAGACTTT+AGG | - | chr7_3:63319140-63319159 | Msa1115790:intron | 35.0% | |
| TTGTGACAGGAGAAAATGAT+AGG | + | chr7_3:63319187-63319206 | None:intergenic | 35.0% | |
| ATTATGTGGATGATGTCAAC+AGG | - | chr7_3:63319422-63319441 | Msa1115790:intron | 35.0% | |
| ! | TGATAATCACTCCACTGATT+TGG | - | chr7_3:63319486-63319505 | Msa1115790:intron | 35.0% |
| TTGGAGAAAGAGCAAAAAGA+AGG | - | chr7_3:63319505-63319524 | Msa1115790:intron | 35.0% | |
| TGGAGAAAGAGCAAAAAGAA+GGG | - | chr7_3:63319506-63319525 | Msa1115790:intron | 35.0% | |
| !! | TTCGCTCTAACCTTACTTTT+TGG | + | chr7_3:63319634-63319653 | None:intergenic | 35.0% |
| AAACTGCAATCAAAGGTAAC+AGG | - | chr7_3:63319706-63319725 | Msa1115790:intron | 35.0% | |
| !! | CTTTTGTTTGTAACTCTTGC+AGG | + | chr7_3:63319769-63319788 | None:intergenic | 35.0% |
| !! | AACTTTCACTGGCTTAGTAT+TGG | + | chr7_3:63319800-63319819 | None:intergenic | 35.0% |
| AGTTCCTGCAAAAGTTTCTT+CGG | - | chr7_3:63319816-63319835 | Msa1115790:intron | 35.0% | |
| ATCTTGGATGGATCTTCTAA+TGG | - | chr7_3:63319892-63319911 | Msa1115790:intron | 35.0% | |
| TATTCTATTGTACCAGAGCA+TGG | - | chr7_3:63320084-63320103 | Msa1115790:CDS | 35.0% | |
| CATGTATATAGAGCCTAGAA+AGG | + | chr7_3:63320146-63320165 | None:intergenic | 35.0% | |
| !!! | AATTGTTGCTTTCCTTTTCG+GGG | + | chr7_3:63320184-63320203 | None:intergenic | 35.0% |
| !!! | CAATTGTTGCTTTCCTTTTC+GGG | + | chr7_3:63320185-63320204 | None:intergenic | 35.0% |
| !!! | GCAATTGTTGCTTTCCTTTT+CGG | + | chr7_3:63320186-63320205 | None:intergenic | 35.0% |
| ATTGCCAAGAATACTGTTTC+TGG | - | chr7_3:63320201-63320220 | Msa1115790:intron | 35.0% | |
| !!! | TACTGTTTCTGGCCTTATTT+TGG | - | chr7_3:63320212-63320231 | Msa1115790:intron | 35.0% |
| ! | TGTGATTCAGGTTAACTTTC+TGG | - | chr7_3:63320352-63320371 | Msa1115790:CDS | 35.0% |
| !! | AAATGGAAAGGTATCCCAAA+TGG | - | chr7_3:63320507-63320526 | Msa1115790:CDS | 35.0% |
| CCATTTCCTGATTTACCATT+TGG | + | chr7_3:63320525-63320544 | None:intergenic | 35.0% | |
| CCAAATGGTAAATCAGGAAA+TGG | - | chr7_3:63320522-63320541 | Msa1115790:CDS | 35.0% | |
| !! | TCTTTCTAAGGCAAACGTAA+AGG | + | chr7_3:63320586-63320605 | None:intergenic | 35.0% |
| ! | TCGAATCATGGATCTTTTCT+CGG | - | chr7_3:63320607-63320626 | Msa1115790:CDS | 35.0% |
| TATTGCAGATGGAACTTCTA+GGG | + | chr7_3:63320789-63320808 | None:intergenic | 35.0% | |
| TTATTGCAGATGGAACTTCT+AGG | + | chr7_3:63320790-63320809 | None:intergenic | 35.0% | |
| ACTTCTCAGTTTATTGCAGA+TGG | + | chr7_3:63320800-63320819 | None:intergenic | 35.0% | |
| !!! | GAGAAGTGTTCTATGCTTTT+AGG | - | chr7_3:63320813-63320832 | Msa1115790:CDS | 35.0% |
| CCCAACAGATTTATTTGAAC+AGG | + | chr7_3:63320875-63320894 | None:intergenic | 35.0% | |
| GTTCAAATAAATCTGTTGGG+AGG | - | chr7_3:63320875-63320894 | Msa1115790:CDS | 35.0% | |
| ! | GAAACTTTTCCATCAATCTC+TGG | - | chr7_3:63320932-63320951 | Msa1115790:CDS | 35.0% |
| !! | AGAGTCTTTGAAAAGCATCT+TGG | + | chr7_3:63320969-63320988 | None:intergenic | 35.0% |
| GAGGCTTAGAACAAAAGAAT+GGG | + | chr7_3:63321095-63321114 | None:intergenic | 35.0% | |
| TGAGGCTTAGAACAAAAGAA+TGG | + | chr7_3:63321096-63321115 | None:intergenic | 35.0% | |
| !! | TCTTTTGTTCTAAGCCTCAA+AGG | - | chr7_3:63321097-63321116 | Msa1115790:intron | 35.0% |
| AAAATTCATTCACCAGGTCA+TGG | - | chr7_3:63321132-63321151 | Msa1115790:intron | 35.0% | |
| CGATGTTCAATGCAATTCTT+CGG | - | chr7_3:63321182-63321201 | Msa1115790:intron | 35.0% | |
| GATGTTCAATGCAATTCTTC+GGG | - | chr7_3:63321183-63321202 | Msa1115790:intron | 35.0% | |
| GATCTGATATTGGATCAGTT+GGG | + | chr7_3:63321225-63321244 | None:intergenic | 35.0% | |
| TCCAATATCAGATCCAATTG+TGG | - | chr7_3:63321231-63321250 | Msa1115790:intron | 35.0% | |
| TCCACAATTGGATCTGATAT+TGG | + | chr7_3:63321235-63321254 | None:intergenic | 35.0% | |
| AGATCCAATTGTGGATTCAA+AGG | - | chr7_3:63321240-63321259 | Msa1115790:intron | 35.0% | |
| TGGTGCACAGCTAAAAAATT+CGG | - | chr7_3:63321300-63321319 | Msa1115790:intron | 35.0% | |
| AGATTGCTCACTGATATGTT+TGG | - | chr7_3:63321661-63321680 | Msa1115790:intron | 35.0% | |
| CATTGATGCTGAAGATTGTT+CGG | - | chr7_3:63321684-63321703 | Msa1115790:intron | 35.0% | |
| ! | CTATCCATAAGCATGTCTTT+TGG | + | chr7_3:63321811-63321830 | None:intergenic | 35.0% |
| ATCAATGAAAGACTGATGGA+TGG | + | chr7_3:63321946-63321965 | None:intergenic | 35.0% | |
| TACGCCAACATTATCATTAG+TGG | + | chr7_3:63322114-63322133 | None:intergenic | 35.0% | |
| TTCCTTTGCTAATGCAAACT+CGG | + | chr7_3:63322161-63322180 | None:intergenic | 35.0% | |
| TACTAGTGATGAAGAACTTG+AGG | - | chr7_3:63322496-63322515 | Msa1115790:intron | 35.0% | |
| AATGGTAATCACAAAGAGCA+AGG | - | chr7_3:63322587-63322606 | Msa1115790:intron | 35.0% | |
| ATGGTAATCACAAAGAGCAA+GGG | - | chr7_3:63322588-63322607 | Msa1115790:intron | 35.0% | |
| ! | TAGTTGATATCTGGCATTTG+TGG | + | chr7_3:63322624-63322643 | None:intergenic | 35.0% |
| ! | TTCACGAAGTAGTTGATATC+TGG | + | chr7_3:63322633-63322652 | None:intergenic | 35.0% |
| ATCAACTACTTCGTGAAGTT+TGG | - | chr7_3:63322636-63322655 | Msa1115790:intron | 35.0% | |
| TTCACAAGTTACACATCACA+TGG | + | chr7_3:63322663-63322682 | None:intergenic | 35.0% | |
| !!! | TTTTGGAATTCTTCATCCCT+AGG | - | chr7_3:63322787-63322806 | Msa1115790:five_prime_UTR | 35.0% |
| ! | TTTGGAATTCTTCATCCCTA+GGG | - | chr7_3:63322788-63322807 | Msa1115790:five_prime_UTR | 35.0% |
| TTCATCCCTAGGGAAAATTA+AGG | - | chr7_3:63322798-63322817 | Msa1115790:five_prime_UTR | 35.0% | |
| ! | TTGAGCCTTAATTTTCCCTA+GGG | + | chr7_3:63322806-63322825 | None:intergenic | 35.0% |
| ! | ATTGAGCCTTAATTTTCCCT+AGG | + | chr7_3:63322807-63322826 | None:intergenic | 35.0% |
| !!! | CTCAATTTCCCTTCCTTTTT+TGG | - | chr7_3:63322821-63322840 | Msa1115790:five_prime_UTR | 35.0% |
| TAAGCATCAGAATACGACAT+TGG | - | chr7_3:63322993-63323012 | Msa1115790:five_prime_UTR | 35.0% | |
| ! | AGTAGTGAGAGTGTGTTTAG+GGG | + | chr7_3:63317439-63317458 | None:intergenic | 40.0% |
| ACAACACATTACTAATCCCG+AGG | - | chr7_3:63317496-63317515 | Msa1115790:three_prime_UTR | 40.0% | |
| GAACTAACCACAAGAAACAC+GGG | + | chr7_3:63317592-63317611 | None:intergenic | 40.0% | |
| GGAACTAACCACAAGAAACA+CGG | + | chr7_3:63317593-63317612 | None:intergenic | 40.0% | |
| !! | AAAATCTGATGGTGGAGTAG+GGG | + | chr7_3:63318411-63318430 | None:intergenic | 40.0% |
| TGGCCTGAAATTTAATCTGG+TGG | - | chr7_3:63318797-63318816 | Msa1115790:CDS | 40.0% | |
| !!! | ACATTGCTGTTTTGAGTCTC+TGG | - | chr7_3:63319059-63319078 | Msa1115790:intron | 40.0% |
| CAAATGAAGAAGCTTGTGAC+AGG | + | chr7_3:63319200-63319219 | None:intergenic | 40.0% | |
| TTGCTCTTTCTCCAAATCAG+TGG | + | chr7_3:63319500-63319519 | None:intergenic | 40.0% | |
| TAGAAAGCAATCGTGGATCA+AGG | - | chr7_3:63319659-63319678 | Msa1115790:CDS | 40.0% | |
| AGAAAGCAATCGTGGATCAA+GGG | - | chr7_3:63319660-63319679 | Msa1115790:CDS | 40.0% | |
| ! | ACTTTTGCAGGAACTTTCAC+TGG | + | chr7_3:63319811-63319830 | None:intergenic | 40.0% |
| ! | GATTCCGAAGAAACTTTTGC+AGG | + | chr7_3:63319823-63319842 | None:intergenic | 40.0% |
| GTTTCTTCGGAATCTTCTGA+AGG | - | chr7_3:63319829-63319848 | Msa1115790:intron | 40.0% | |
| AATGCTGAAGAAAACGGTGA+AGG | - | chr7_3:63319958-63319977 | Msa1115790:CDS | 40.0% | |
| AAGGCCAGAAACAGTATTCT+TGG | + | chr7_3:63320208-63320227 | None:intergenic | 40.0% | |
| CATGCGGTAATGATGTTTCA+AGG | - | chr7_3:63320244-63320263 | Msa1115790:intron | 40.0% | |
| CTGAATCACAAGTCAAGATG+CGG | + | chr7_3:63320342-63320361 | None:intergenic | 40.0% | |
| TCACAAGCATTTGGGAATTC+CGG | - | chr7_3:63320408-63320427 | Msa1115790:CDS | 40.0% | |
| TCTGCATCACTGAAATGGAA+AGG | - | chr7_3:63320495-63320514 | Msa1115790:CDS | 40.0% | |
| GGTATCCCAAATGGTAAATC+AGG | - | chr7_3:63320516-63320535 | Msa1115790:CDS | 40.0% | |
| !!! | GGAAATGGTTTTATGCAGAC+CGG | - | chr7_3:63320537-63320556 | Msa1115790:CDS | 40.0% |
| TAAGGCAAACGTAAAGGTTC+CGG | + | chr7_3:63320580-63320599 | None:intergenic | 40.0% | |
| CCATGATTCGACTCTTTCTA+AGG | + | chr7_3:63320598-63320617 | None:intergenic | 40.0% | |
| CCTTAGAAAGAGTCGAATCA+TGG | - | chr7_3:63320595-63320614 | Msa1115790:CDS | 40.0% | |
| GGTAGAGTTTAAATCCCTTC+AGG | + | chr7_3:63320767-63320786 | None:intergenic | 40.0% | |
| ATTGCAGATGGAACTTCTAG+GGG | + | chr7_3:63320788-63320807 | None:intergenic | 40.0% | |
| GACTCCTTACATGCAATCTT+CGG | - | chr7_3:63320840-63320859 | Msa1115790:CDS | 40.0% | |
| CTTACATGCAATCTTCGGTT+GGG | - | chr7_3:63320845-63320864 | Msa1115790:CDS | 40.0% | |
| TTACATGCAATCTTCGGTTG+GGG | - | chr7_3:63320846-63320865 | Msa1115790:CDS | 40.0% | |
| GGATCTGATATTGGATCAGT+TGG | + | chr7_3:63321226-63321245 | None:intergenic | 40.0% | |
| TCCAAAGCTTAAGTTTCCTG+CGG | + | chr7_3:63321278-63321297 | None:intergenic | 40.0% | |
| !! | GGAAACTTAAGCTTTGGATC+TGG | - | chr7_3:63321280-63321299 | Msa1115790:intron | 40.0% |
| TCTTCGCTATCACATCTTAG+AGG | - | chr7_3:63321425-63321444 | Msa1115790:five_prime_UTR | 40.0% | |
| CTTCGCTATCACATCTTAGA+GGG | - | chr7_3:63321426-63321445 | Msa1115790:five_prime_UTR | 40.0% | |
| ! | CCATAAGCATAAAGGTGTGT+AGG | + | chr7_3:63321606-63321625 | None:intergenic | 40.0% |
| CCTACACACCTTTATGCTTA+TGG | - | chr7_3:63321603-63321622 | Msa1115790:intron | 40.0% | |
| !!! | TGTCTTTTGGGAGCATTAGA+AGG | + | chr7_3:63321798-63321817 | None:intergenic | 40.0% |
| TATGGATAGAAAAGTCAGCC+AGG | - | chr7_3:63321822-63321841 | Msa1115790:intron | 40.0% | |
| GCTATAAGGGAAGCTTCTAA+CGG | + | chr7_3:63322360-63322379 | None:intergenic | 40.0% | |
| TTTCCATTTGTAGCGACTGT+TGG | + | chr7_3:63322569-63322588 | None:intergenic | 40.0% | |
| ACAGTCGCTACAAATGGAAA+TGG | - | chr7_3:63322569-63322588 | Msa1115790:intron | 40.0% | |
| TTGATATCTGGCATTTGTGG+TGG | + | chr7_3:63322621-63322640 | None:intergenic | 40.0% | |
| GATTTAGGAATTCATGGCCT+TGG | - | chr7_3:63323068-63323087 | Msa1115790:five_prime_UTR | 40.0% | |
| ! | GTAGTGAGAGTGTGTTTAGG+GGG | + | chr7_3:63317438-63317457 | None:intergenic | 45.0% |
| AACCACAAGAAACACGGGTA+GGG | + | chr7_3:63317587-63317606 | None:intergenic | 45.0% | |
| TAACCACAAGAAACACGGGT+AGG | + | chr7_3:63317588-63317607 | None:intergenic | 45.0% | |
| GACAAGACAGAAGAGAGAAG+AGG | + | chr7_3:63317748-63317767 | None:intergenic | 45.0% | |
| TCTGTGTGTGTGTGTGTGTT+AGG | + | chr7_3:63317818-63317837 | None:intergenic | 45.0% | |
| ! | TGCTTACTACACTTGCTAGC+TGG | + | chr7_3:63318302-63318321 | None:intergenic | 45.0% |
| !! | AATGAGTGGTATGGCTCTGA+CGG | - | chr7_3:63318467-63318486 | Msa1115790:intron | 45.0% |
| GTTTACGAGACAGACACATG+TGG | - | chr7_3:63318498-63318517 | Msa1115790:intron | 45.0% | |
| GGGCCACCAGATTAAATTTC+AGG | + | chr7_3:63318803-63318822 | None:intergenic | 45.0% | |
| CATCTTGACAAATGCCTCCT+CGG | + | chr7_3:63319449-63319468 | None:intergenic | 45.0% | |
| ATACGACACCGATACAACCA+AGG | - | chr7_3:63319540-63319559 | Msa1115790:CDS | 45.0% | |
| TCTAATGGCGCTCAAAGTGT+AGG | - | chr7_3:63319907-63319926 | Msa1115790:CDS | 45.0% | |
| TGAAGAAAACGGTGAAGGTG+AGG | - | chr7_3:63319963-63319982 | Msa1115790:CDS | 45.0% | |
| !! | CGCATCTTGACTTGTGATTC+AGG | - | chr7_3:63320340-63320359 | Msa1115790:CDS | 45.0% |
| !! | CATAATGGGACTGACTTGAC+CGG | + | chr7_3:63320430-63320449 | None:intergenic | 45.0% |
| GTCAAGTCAGTCCCATTATG+AGG | - | chr7_3:63320430-63320449 | Msa1115790:CDS | 45.0% | |
| AGTCAGTCCCATTATGAGGT+TGG | - | chr7_3:63320434-63320453 | Msa1115790:CDS | 45.0% | |
| AGACTTCCCATCATTCCTCT+TGG | + | chr7_3:63320478-63320497 | None:intergenic | 45.0% | |
| GGAAGTCTGCATCACTGAAA+TGG | - | chr7_3:63320490-63320509 | Msa1115790:CDS | 45.0% | |
| TTATGCAGACCGGTGAAGAT+TGG | - | chr7_3:63320547-63320566 | Msa1115790:CDS | 45.0% | |
| ! | CTTTTCTCGGCTAGTAGAGT+CGG | - | chr7_3:63320620-63320639 | Msa1115790:CDS | 45.0% |
| CCAACCGAAGATTGCATGTA+AGG | + | chr7_3:63320847-63320866 | None:intergenic | 45.0% | |
| CCTTACATGCAATCTTCGGT+TGG | - | chr7_3:63320844-63320863 | Msa1115790:CDS | 45.0% | |
| TGATTGTGATCACCTAGAGC+AGG | + | chr7_3:63320910-63320929 | None:intergenic | 45.0% | |
| ! | GCTCTAGGTGATCACAATCA+AGG | - | chr7_3:63320910-63320929 | Msa1115790:CDS | 45.0% |
| AGCGTTTCTCCAGAGATTGA+TGG | + | chr7_3:63320944-63320963 | None:intergenic | 45.0% | |
| AATTCTTCGGGAATCAGCCT+TGG | - | chr7_3:63321195-63321214 | Msa1115790:intron | 45.0% | |
| CTTAAGTTTCCTGCGGGAAT+CGG | + | chr7_3:63321271-63321290 | None:intergenic | 45.0% | |
| CCAAAGCTTAAGTTTCCTGC+GGG | + | chr7_3:63321277-63321296 | None:intergenic | 45.0% | |
| ATGTGGCTCTTGCAGTATCA+AGG | - | chr7_3:63321557-63321576 | Msa1115790:intron | 45.0% | |
| GGAAGAGTTACTTGAACTGC+AGG | - | chr7_3:63321624-63321643 | Msa1115790:intron | 45.0% | |
| GAGTTACTTGAACTGCAGGT+TGG | - | chr7_3:63321628-63321647 | Msa1115790:intron | 45.0% | |
| ! | TTGAACTGCAGGTTGGCAAT+TGG | - | chr7_3:63321635-63321654 | Msa1115790:intron | 45.0% |
| AGAACAGTGAGAACGACGAA+AGG | - | chr7_3:63321719-63321738 | Msa1115790:intron | 45.0% | |
| GAAGGTCACTCAAGTCGTTA+AGG | + | chr7_3:63321780-63321799 | None:intergenic | 45.0% | |
| GCTCCCAAAAGACATGCTTA+TGG | - | chr7_3:63321804-63321823 | Msa1115790:intron | 45.0% | |
| GGTTCTCTGTAACTTCACTC+CGG | - | chr7_3:63321972-63321991 | Msa1115790:intron | 45.0% | |
| GTCCGAGTTTGCATTAGCAA+AGG | - | chr7_3:63322156-63322175 | Msa1115790:intron | 45.0% | |
| TAGAAGCTTCCCTTATAGCG+CGG | - | chr7_3:63322361-63322380 | Msa1115790:intron | 45.0% | |
| TCACCTGACGAGGAATGTAT+CGG | - | chr7_3:63322454-63322473 | Msa1115790:intron | 45.0% | |
| TCTCCAACAGTCGCTACAAA+TGG | - | chr7_3:63322563-63322582 | Msa1115790:intron | 45.0% | |
| GCATCAGAATACGACATTGG+AGG | - | chr7_3:63322996-63323015 | Msa1115790:five_prime_UTR | 45.0% | |
| !! | GATATTTAAAAAAAAATAAT+TGG | - | chr7_3:63320680-63320699 | Msa1115790:CDS | 5.0% |
| !! | TATTTAAAAAAAAATAATTG+GGG | - | chr7_3:63320682-63320701 | Msa1115790:CDS | 5.0% |
| TACCCTACCCGTGTTTCTTG+TGG | - | chr7_3:63317582-63317601 | Msa1115790:three_prime_UTR | 50.0% | |
| ! | CAGACTTTAGGAGCTTGCCA+AGG | - | chr7_3:63319152-63319171 | Msa1115790:intron | 50.0% |
| GAAAACGGTGAAGGTGAGGA+TGG | - | chr7_3:63319967-63319986 | Msa1115790:CDS | 50.0% | |
| !! | GTAAGCATTGGACCCCGAAA+AGG | - | chr7_3:63320169-63320188 | Msa1115790:CDS | 50.0% |
| AGTCCCATTATGAGGTTGGC+TGG | - | chr7_3:63320438-63320457 | Msa1115790:CDS | 50.0% | |
| ! | GTCCCATTATGAGGTTGGCT+GGG | - | chr7_3:63320439-63320458 | Msa1115790:CDS | 50.0% |
| GACCCAGCCAACCTCATAAT+GGG | + | chr7_3:63320444-63320463 | None:intergenic | 50.0% | |
| TGACCCAGCCAACCTCATAA+TGG | + | chr7_3:63320445-63320464 | None:intergenic | 50.0% | |
| ! | ATGAGGTTGGCTGGGTCAAA+TGG | - | chr7_3:63320447-63320466 | Msa1115790:CDS | 50.0% |
| ! | TGAGGTTGGCTGGGTCAAAT+GGG | - | chr7_3:63320448-63320467 | Msa1115790:CDS | 50.0% |
| GGTCTGCCAAGAGGAATGAT+GGG | - | chr7_3:63320469-63320488 | Msa1115790:CDS | 50.0% | |
| GGTCTCTTGCCAATCTTCAC+CGG | + | chr7_3:63320559-63320578 | None:intergenic | 50.0% | |
| GGTGAAGATTGGCAAGAGAC+CGG | - | chr7_3:63320558-63320577 | Msa1115790:CDS | 50.0% | |
| AAATCTGTTGGGAGGCTGCT+AGG | - | chr7_3:63320883-63320902 | Msa1115790:CDS | 50.0% | |
| TTTGCCTGCGATGGCAAGAA+TGG | - | chr7_3:63321023-63321042 | Msa1115790:CDS | 50.0% | |
| CATACCATTCTTGCCATCGC+AGG | + | chr7_3:63321030-63321049 | None:intergenic | 50.0% | |
| CTATGCACTGTTCCATGACC+TGG | + | chr7_3:63321147-63321166 | None:intergenic | 50.0% | |
| TGGATCAGTTGGGATCTCCA+AGG | + | chr7_3:63321215-63321234 | None:intergenic | 50.0% | |
| CCCGCAGGAAACTTAAGCTT+TGG | - | chr7_3:63321274-63321293 | Msa1115790:intron | 50.0% | |
| TCGTCGTTCTCACTGTTCTC+TGG | + | chr7_3:63321718-63321737 | None:intergenic | 50.0% | |
| GGATAGAAAAGTCAGCCAGG+AGG | - | chr7_3:63321825-63321844 | Msa1115790:intron | 50.0% | |
| CAAGCATACCTCTCCGTTCA+AGG | + | chr7_3:63322040-63322059 | None:intergenic | 50.0% | |
| TGTGGAGCGAAGAATGTCAG+CGG | - | chr7_3:63322331-63322350 | Msa1115790:intron | 50.0% | |
| CAACTGAAGCCGCGCTATAA+GGG | + | chr7_3:63322373-63322392 | None:intergenic | 50.0% | |
| ACAACTGAAGCCGCGCTATA+AGG | + | chr7_3:63322374-63322393 | None:intergenic | 50.0% | |
| ! | TCTGCTACATTGGCTGACGA+GGG | + | chr7_3:63322407-63322426 | None:intergenic | 50.0% |
| !! | GGAATGTATCGGCTGTTCAG+CGG | - | chr7_3:63322465-63322484 | Msa1115790:intron | 50.0% |
| GTAGCGACTGTTGGAGATGA+AGG | + | chr7_3:63322560-63322579 | None:intergenic | 50.0% | |
| GGATGATGTCAACAGGTCCG+AGG | - | chr7_3:63319429-63319448 | Msa1115790:intron | 55.0% | |
| TGATGTCAACAGGTCCGAGG+AGG | - | chr7_3:63319432-63319451 | Msa1115790:intron | 55.0% | |
| GAGAGAAGTTGCTGCTCTCG+AGG | - | chr7_3:63320053-63320072 | Msa1115790:CDS | 55.0% | |
| TGTGCTGAGCTACCATGCTC+TGG | + | chr7_3:63320099-63320118 | None:intergenic | 55.0% | |
| GCATGGTAGCTCAGCACACA+AGG | - | chr7_3:63320101-63320120 | Msa1115790:CDS | 55.0% | |
| ACAAGGTTCACACACCTGCG+CGG | - | chr7_3:63320118-63320137 | Msa1115790:CDS | 55.0% | |
| GGTCAAATGGGTCTGCCAAG+AGG | - | chr7_3:63320460-63320479 | Msa1115790:CDS | 55.0% | |
| GGGTCTGCCAAGAGGAATGA+TGG | - | chr7_3:63320468-63320487 | Msa1115790:CDS | 55.0% | |
| AGACTCTGTCCTCTTCGAGC+AGG | - | chr7_3:63320982-63321001 | Msa1115790:CDS | 55.0% | |
| TCTGTCCTCTTCGAGCAGGA+GGG | - | chr7_3:63320986-63321005 | Msa1115790:CDS | 55.0% | |
| GTGTGGTTGTTTGCCTGCGA+TGG | - | chr7_3:63321014-63321033 | Msa1115790:CDS | 55.0% | |
| !!! | AAGGTTTTGCCGATTCCCGC+AGG | - | chr7_3:63321259-63321278 | Msa1115790:intron | 55.0% |
| AGTGAGAACGACGAAAGGCG+AGG | - | chr7_3:63321724-63321743 | Msa1115790:intron | 55.0% | |
| GCGTCAGGACAGAACTCATC+CGG | + | chr7_3:63321994-63322013 | None:intergenic | 55.0% | |
| GGATGAGTTCTGTCCTGACG+CGG | - | chr7_3:63321993-63322012 | Msa1115790:intron | 55.0% | |
| GCTGTCTTGGAGGCCTTGAA+CGG | - | chr7_3:63322024-63322043 | Msa1115790:intron | 55.0% | |
| ! | CTCTGCTACATTGGCTGACG+AGG | + | chr7_3:63322408-63322427 | None:intergenic | 55.0% |
| !! | GAGGAAAGTGTCACCTGACG+AGG | - | chr7_3:63322444-63322463 | Msa1115790:intron | 55.0% |
| CAGCCGATACATTCCTCGTC+AGG | + | chr7_3:63322460-63322479 | None:intergenic | 55.0% | |
| CGGTGAAGGTGAGGATGGTG+CGG | - | chr7_3:63319972-63319991 | Msa1115790:CDS | 60.0% | |
| AGGTGAGGATGGTGCGGCTT+TGG | - | chr7_3:63319978-63319997 | Msa1115790:CDS | 60.0% | |
| CTCGGCTAGTAGAGTCGGTG+TGG | - | chr7_3:63320625-63320644 | Msa1115790:CDS | 60.0% | |
| GGCTAGTAGAGTCGGTGTGG+TGG | - | chr7_3:63320628-63320647 | Msa1115790:CDS | 60.0% | |
| AGTAGAGTCGGTGTGGTGGC+AGG | - | chr7_3:63320632-63320651 | Msa1115790:CDS | 60.0% | |
| AGGCTGCTAGGACCTGCTCT+AGG | - | chr7_3:63320895-63320914 | Msa1115790:CDS | 60.0% | |
| CTCTGTCCTCTTCGAGCAGG+AGG | - | chr7_3:63320985-63321004 | Msa1115790:CDS | 60.0% | |
| GAGAACGACGAAAGGCGAGG+TGG | - | chr7_3:63321727-63321746 | Msa1115790:intron | 60.0% | |
| TTCTGTCCTGACGCGGTTCC+AGG | - | chr7_3:63322000-63322019 | Msa1115790:intron | 60.0% | |
| GGTTCCAGGAGCTGTCTTGG+AGG | - | chr7_3:63322014-63322033 | Msa1115790:intron | 60.0% | |
| AAGGCCTCCAAGACAGCTCC+TGG | + | chr7_3:63322021-63322040 | None:intergenic | 60.0% | |
| CTTGGAGGCCTTGAACGGAG+AGG | - | chr7_3:63322029-63322048 | Msa1115790:intron | 60.0% | |
| ! | GCTACATTGGCTGACGAGGG+AGG | + | chr7_3:63322404-63322423 | None:intergenic | 60.0% |
| !! | GTATCGGCTGTTCAGCGGAG+AGG | - | chr7_3:63322470-63322489 | Msa1115790:intron | 60.0% |
| TCGTGCCCTCCTGCTCGAAG+AGG | + | chr7_3:63320994-63321013 | None:intergenic | 65.0% | |
| ACAGCTCCTGGAACCGCGTC+AGG | + | chr7_3:63322009-63322028 | None:intergenic | 65.0% | |
| CGCGGTTCCAGGAGCTGTCT+TGG | - | chr7_3:63322011-63322030 | Msa1115790:intron | 65.0% | |
| CACCTGCGCGGCGCCTTTCT+AGG | - | chr7_3:63320130-63320149 | Msa1115790:CDS | 70.0% | |
| !! | AGCCTAGAAAGGCGCCGCGC+AGG | + | chr7_3:63320135-63320154 | None:intergenic | 70.0% |
| ! | CGAGCAGGAGGGCACGAGTG+TGG | - | chr7_3:63320997-63321016 | Msa1115790:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 63317429 | 63323124 | 63317429 | ID=Msa1115790;Name=Msa1115790 |
| chr7_3 | mRNA | 63317429 | 63323124 | 63317429 | ID=Msa1115790-mRNA-1;Parent=Msa1115790;Name=Msa1115790-mRNA-1;_AED=0.17;_eAED=0.17;_QI=519|1|1|1|0.75|0.66|9|457|710 |
| chr7_3 | exon | 63317429 | 63318227 | 63317429 | ID=Msa1115790-mRNA-1:exon:14864;Parent=Msa1115790-mRNA-1 |
| chr7_3 | exon | 63318503 | 63318616 | 63318503 | ID=Msa1115790-mRNA-1:exon:14863;Parent=Msa1115790-mRNA-1 |
| chr7_3 | exon | 63318707 | 63318907 | 63318707 | ID=Msa1115790-mRNA-1:exon:14862;Parent=Msa1115790-mRNA-1 |
| chr7_3 | exon | 63319232 | 63319405 | 63319232 | ID=Msa1115790-mRNA-1:exon:14861;Parent=Msa1115790-mRNA-1 |
| chr7_3 | exon | 63319509 | 63319718 | 63319509 | ID=Msa1115790-mRNA-1:exon:14860;Parent=Msa1115790-mRNA-1 |
| chr7_3 | exon | 63319900 | 63320191 | 63319900 | ID=Msa1115790-mRNA-1:exon:14859;Parent=Msa1115790-mRNA-1 |
| chr7_3 | exon | 63320288 | 63321109 | 63320288 | ID=Msa1115790-mRNA-1:exon:14858;Parent=Msa1115790-mRNA-1 |
| chr7_3 | exon | 63321380 | 63321502 | 63321380 | ID=Msa1115790-mRNA-1:exon:14857;Parent=Msa1115790-mRNA-1 |
| chr7_3 | exon | 63322751 | 63323124 | 63322751 | ID=Msa1115790-mRNA-1:exon:14856;Parent=Msa1115790-mRNA-1 |
| chr7_3 | five_prime_UTR | 63322751 | 63323124 | 63322751 | ID=Msa1115790-mRNA-1:five_prime_utr;Parent=Msa1115790-mRNA-1 |
| chr7_3 | five_prime_UTR | 63321380 | 63321502 | 63321380 | ID=Msa1115790-mRNA-1:five_prime_utr;Parent=Msa1115790-mRNA-1 |
| chr7_3 | five_prime_UTR | 63321088 | 63321109 | 63321088 | ID=Msa1115790-mRNA-1:five_prime_utr;Parent=Msa1115790-mRNA-1 |
| chr7_3 | CDS | 63320288 | 63321087 | 63320288 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
| chr7_3 | CDS | 63319900 | 63320191 | 63319900 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
| chr7_3 | CDS | 63319509 | 63319718 | 63319509 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
| chr7_3 | CDS | 63319232 | 63319405 | 63319232 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
| chr7_3 | CDS | 63318707 | 63318907 | 63318707 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
| chr7_3 | CDS | 63318503 | 63318616 | 63318503 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
| chr7_3 | CDS | 63317886 | 63318227 | 63317886 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
| chr7_3 | three_prime_UTR | 63317429 | 63317885 | 63317429 | ID=Msa1115790-mRNA-1:three_prime_utr;Parent=Msa1115790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
