Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1115790 | XP_003625192.1 | 97.042 | 710 | 21 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1426 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1115790 | A2Q3E1 | 97.042 | 710 | 21 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1426 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0074000 | Msa1115790 | 0.801039 | 1.086871e-48 | -8.615850e-47 |
Msa0840020 | Msa1115790 | 0.804959 | 1.681418e-49 | -8.615850e-47 |
Msa0122010 | Msa1115790 | 0.801091 | 1.060141e-48 | -8.615850e-47 |
Msa1034900 | Msa1115790 | 0.837805 | 4.185786e-57 | -8.615850e-47 |
Msa1074940 | Msa1115790 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
Msa1115790 | Msa1162300 | 0.849081 | 4.066206e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1115790 | MtrunA17_Chr7g0258101 | 97.042 | 710 | 21 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1426 |
Msa1115790 | MtrunA17_Chr7g0225961 | 51.455 | 550 | 231 | 12 | 177 | 708 | 447 | 978 | 8.04e-174 | 523 |
Msa1115790 | MtrunA17_Chr6g0459211 | 48.432 | 574 | 255 | 10 | 153 | 708 | 345 | 895 | 1.54e-166 | 501 |
Msa1115790 | MtrunA17_Chr1g0187521 | 42.755 | 697 | 330 | 17 | 22 | 708 | 353 | 990 | 2.32e-162 | 494 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1115790 | AT2G42320.2 | 62.500 | 568 | 174 | 10 | 142 | 708 | 139 | 668 | 0.0 | 727 |
Msa1115790 | AT2G42320.1 | 62.500 | 568 | 174 | 10 | 142 | 708 | 139 | 668 | 0.0 | 727 |
Msa1115790 | AT3G57780.4 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 674 |
Msa1115790 | AT3G57780.1 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 674 |
Msa1115790 | AT3G57780.2 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 674 |
Msa1115790 | AT3G57780.3 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 674 |
Msa1115790 | AT3G57780.5 | 58.296 | 446 | 160 | 6 | 123 | 568 | 116 | 535 | 1.41e-174 | 510 |
Msa1115790 | AT3G01810.1 | 50.823 | 547 | 221 | 11 | 178 | 708 | 403 | 917 | 1.93e-168 | 508 |
Msa1115790 | AT3G01810.3 | 50.823 | 547 | 221 | 11 | 178 | 708 | 403 | 917 | 1.93e-168 | 508 |
Msa1115790 | AT3G01810.2 | 50.823 | 547 | 221 | 11 | 178 | 708 | 403 | 917 | 1.93e-168 | 508 |
Msa1115790 | AT5G06930.2 | 43.966 | 696 | 309 | 12 | 17 | 706 | 102 | 722 | 7.19e-168 | 499 |
Msa1115790 | AT5G06930.3 | 43.966 | 696 | 309 | 12 | 17 | 706 | 102 | 722 | 7.19e-168 | 499 |
Msa1115790 | AT5G06930.1 | 43.966 | 696 | 309 | 12 | 17 | 706 | 102 | 722 | 7.19e-168 | 499 |
Msa1115790 | AT2G42320.4 | 64.773 | 352 | 110 | 4 | 142 | 493 | 139 | 476 | 4.51e-165 | 484 |
Msa1115790 | AT2G42320.3 | 64.773 | 352 | 110 | 4 | 142 | 493 | 139 | 476 | 4.51e-165 | 484 |
Msa1115790 | AT5G43230.1 | 46.154 | 533 | 230 | 12 | 182 | 708 | 361 | 842 | 1.85e-146 | 448 |
Find 213 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGATTCAGGTTAACTTTC+TGG | 0.107816 | 7_3:-63320179 | Msa1115790:intron |
AAAATGAATGTCAGGAATTT+AGG | 0.196472 | 7_3:-63317815 | Msa1115790:three_prime_UTR |
TACTGTTTCTGGCCTTATTT+TGG | 0.209652 | 7_3:-63320319 | Msa1115790:CDS |
TCAGTCTTTCATTGATTATA+CGG | 0.219799 | 7_3:-63318581 | Msa1115790:CDS |
AATAAACAGACAAGATATTT+TGG | 0.219821 | 7_3:-63317761 | Msa1115790:three_prime_UTR |
ATTGCCAAGAATACTGTTTC+TGG | 0.221335 | 7_3:-63320330 | Msa1115790:CDS |
TTCTGTCCTGACGCGGTTCC+AGG | 0.227836 | 7_3:-63318531 | Msa1115790:CDS |
CACCTGCGCGGCGCCTTTCT+AGG | 0.229152 | 7_3:-63320401 | Msa1115790:CDS |
ACAACTGAAGCCGCGCTATA+AGG | 0.264224 | 7_3:+63318160 | None:intergenic |
CCATTTCCTGATTTACCATT+TGG | 0.275012 | 7_3:+63320009 | None:intergenic |
TTATTAAGGATGATGGATTT+AGG | 0.287768 | 7_3:-63317478 | Msa1115790:three_prime_UTR |
GAAACGAAACGAAAAGAAAA+AGG | 0.294387 | 7_3:+63322764 | None:intergenic |
TAGTAGTGAGAGTGTGTTTA+GGG | 0.298416 | 7_3:+63323094 | None:intergenic |
TGATAATCACTCCACTGATT+TGG | 0.300525 | 7_3:-63321045 | Msa1115790:CDS |
GAGATAATTTCACAAGCATT+TGG | 0.301700 | 7_3:-63320132 | Msa1115790:CDS |
CCATGATTCGACTCTTTCTA+AGG | 0.303020 | 7_3:+63319936 | None:intergenic |
TCATCGATATATGCTTATTA+AGG | 0.303343 | 7_3:-63317492 | Msa1115790:three_prime_UTR |
TCTGAGAAGTTACAGACTTT+AGG | 0.316024 | 7_3:-63321391 | Msa1115790:five_prime_UTR |
ATGATTTAGCAACCAAAATA+AGG | 0.316584 | 7_3:+63320307 | None:intergenic |
GGTTAAGGAAATTGAAATCT+TGG | 0.322169 | 7_3:-63320655 | Msa1115790:CDS |
ATCAACTACTTCGTGAAGTT+TGG | 0.328969 | 7_3:-63317895 | Msa1115790:CDS |
ATTCTTTAATGCTACTCTTA+AGG | 0.333131 | 7_3:+63317669 | None:intergenic |
CCCGCAGGAAACTTAAGCTT+TGG | 0.334169 | 7_3:-63319257 | Msa1115790:CDS |
CCCACACTCATTTATCATTA+CGG | 0.334476 | 7_3:-63322896 | Msa1115790:five_prime_UTR |
TCACAAGCATTTGGGAATTC+CGG | 0.335945 | 7_3:-63320123 | Msa1115790:CDS |
ATTTCCTTAACCTCTATAAC+AGG | 0.338096 | 7_3:+63320666 | None:intergenic |
CCCAACAGATTTATTTGAAC+AGG | 0.344331 | 7_3:+63319659 | None:intergenic |
TCCACAATTGGATCTGATAT+TGG | 0.346515 | 7_3:+63319299 | None:intergenic |
CGCGGTTCCAGGAGCTGTCT+TGG | 0.351188 | 7_3:-63318520 | Msa1115790:CDS |
AAGGCCAGAAACAGTATTCT+TGG | 0.354379 | 7_3:+63320326 | None:intergenic |
TTCATCCCTAGGGAAAATTA+AGG | 0.360437 | 7_3:-63317733 | Msa1115790:three_prime_UTR |
CGATGTTCAATGCAATTCTT+CGG | 0.364445 | 7_3:-63319349 | Msa1115790:CDS |
CAACTGAAGCCGCGCTATAA+GGG | 0.365290 | 7_3:+63318161 | None:intergenic |
CTATCCATAAGCATGTCTTT+TGG | 0.365940 | 7_3:+63318723 | None:intergenic |
GCTCCCAAAAGACATGCTTA+TGG | 0.367269 | 7_3:-63318727 | Msa1115790:CDS |
GGTATCCCAAATGGTAAATC+AGG | 0.370404 | 7_3:-63320015 | Msa1115790:CDS |
AAAACCTGTTATAGAGGTTA+AGG | 0.378511 | 7_3:-63320670 | Msa1115790:CDS |
TGACCCAGCCAACCTCATAA+TGG | 0.379222 | 7_3:+63320089 | None:intergenic |
ATGAGGTTGGCTGGGTCAAA+TGG | 0.379911 | 7_3:-63320084 | Msa1115790:CDS |
CATTTCCTGATTTACCATTT+GGG | 0.383540 | 7_3:+63320010 | None:intergenic |
TTCACGAAGTAGTTGATATC+TGG | 0.384114 | 7_3:+63317901 | None:intergenic |
GATGTTCAATGCAATTCTTC+GGG | 0.387788 | 7_3:-63319348 | Msa1115790:CDS |
AGTCCCATTATGAGGTTGGC+TGG | 0.390091 | 7_3:-63320093 | Msa1115790:CDS |
ATGATGGATTTAGGAATTCA+TGG | 0.392575 | 7_3:-63317469 | Msa1115790:three_prime_UTR |
AGATAATTTCACAAGCATTT+GGG | 0.392815 | 7_3:-63320131 | Msa1115790:CDS |
TAAGGCAAACGTAAAGGTTC+CGG | 0.395508 | 7_3:+63319954 | None:intergenic |
TCGTCGTTCTCACTGTTCTC+TGG | 0.395693 | 7_3:+63318816 | None:intergenic |
CAAGCATACCTCTCCGTTCA+AGG | 0.396892 | 7_3:+63318494 | None:intergenic |
GCTTTCATCTATCATTGATA+AGG | 0.398674 | 7_3:-63317999 | Msa1115790:CDS |
AGTTCCTGCAAAAGTTTCTT+CGG | 0.400597 | 7_3:-63320715 | Msa1115790:CDS |
GGAAGTCTGCATCACTGAAA+TGG | 0.412726 | 7_3:-63320041 | Msa1115790:CDS |
TATATGCTTATTAAGGATGA+TGG | 0.415256 | 7_3:-63317485 | Msa1115790:three_prime_UTR |
GACTCCTTACATGCAATCTT+CGG | 0.416368 | 7_3:-63319691 | Msa1115790:CDS |
GACCCAGCCAACCTCATAAT+GGG | 0.418748 | 7_3:+63320090 | None:intergenic |
AAACTGCAATCAAAGGTAAC+AGG | 0.421068 | 7_3:-63320825 | Msa1115790:CDS |
CTTACATGCAATCTTCGGTT+GGG | 0.421290 | 7_3:-63319686 | Msa1115790:CDS |
AGGTGAGGATGGTGCGGCTT+TGG | 0.421475 | 7_3:-63320553 | Msa1115790:CDS |
AACTTCTCAGAATTGTGCTT+CGG | 0.421560 | 7_3:+63321403 | None:intergenic |
GATTTAGGAATTCATGGCCT+TGG | 0.422108 | 7_3:-63317463 | Msa1115790:three_prime_UTR |
CCAAATGGTAAATCAGGAAA+TGG | 0.422555 | 7_3:-63320009 | Msa1115790:CDS |
TAAAAGTGCATACACAATCT+TGG | 0.427475 | 7_3:+63321438 | None:intergenic |
CTCTGCTACATTGGCTGACG+AGG | 0.428027 | 7_3:+63318126 | None:intergenic |
AACTTTCACTGGCTTAGTAT+TGG | 0.428733 | 7_3:+63320734 | None:intergenic |
TGCAACTTTCTCTGCTACAT+TGG | 0.429376 | 7_3:+63318117 | None:intergenic |
CTTAAGTTTCCTGCGGGAAT+CGG | 0.429998 | 7_3:+63319263 | None:intergenic |
TTGAACTGCAGGTTGGCAAT+TGG | 0.431617 | 7_3:-63318896 | Msa1115790:intron |
CCAACCGAAGATTGCATGTA+AGG | 0.438163 | 7_3:+63319687 | None:intergenic |
AGAGTCTTTGAAAAGCATCT+TGG | 0.438876 | 7_3:+63319565 | None:intergenic |
TTATGCAGACCGGTGAAGAT+TGG | 0.439100 | 7_3:-63319984 | Msa1115790:CDS |
ATCTTGGATGGATCTTCTAA+TGG | 0.439235 | 7_3:-63320639 | Msa1115790:CDS |
AAATTGTACGTTAAAATGAT+AGG | 0.439544 | 7_3:+63322986 | None:intergenic |
CCTTAGAAAGAGTCGAATCA+TGG | 0.440461 | 7_3:-63319936 | Msa1115790:CDS |
AAAACCTTTGAATCCACAAT+TGG | 0.442116 | 7_3:+63319287 | None:intergenic |
GGATCTGATATTGGATCAGT+TGG | 0.442351 | 7_3:+63319308 | None:intergenic |
AGATTGCTCACTGATATGTT+TGG | 0.443061 | 7_3:-63318870 | Msa1115790:CDS |
TCCTGTTCAAATAAATCTGT+TGG | 0.444730 | 7_3:-63319660 | Msa1115790:CDS |
TTAGTAGTGAGAGTGTGTTT+AGG | 0.446226 | 7_3:+63323093 | None:intergenic |
AAGGCCTCCAAGACAGCTCC+TGG | 0.449202 | 7_3:+63318513 | None:intergenic |
CATTGATGCTGAAGATTGTT+CGG | 0.456507 | 7_3:-63318847 | Msa1115790:CDS |
AGCGTTTCTCCAGAGATTGA+TGG | 0.459672 | 7_3:+63319590 | None:intergenic |
ACAGCTCCTGGAACCGCGTC+AGG | 0.460610 | 7_3:+63318525 | None:intergenic |
GTAGCGACTGTTGGAGATGA+AGG | 0.463021 | 7_3:+63317974 | None:intergenic |
AAATCTATAAACTCAAATAA+AGG | 0.465368 | 7_3:-63320789 | Msa1115790:CDS |
CAGTCTTTCATTGATTATAC+GGG | 0.471953 | 7_3:-63318580 | Msa1115790:CDS |
CATCTTGACAAATGCCTCCT+CGG | 0.474247 | 7_3:+63321085 | None:intergenic |
TCTCCAACAGTCGCTACAAA+TGG | 0.474955 | 7_3:-63317968 | Msa1115790:CDS |
GAAGGTCACTCAAGTCGTTA+AGG | 0.475334 | 7_3:+63318754 | None:intergenic |
GGTCTCTTGCCAATCTTCAC+CGG | 0.476305 | 7_3:+63319975 | None:intergenic |
GGGTCTGCCAAGAGGAATGA+TGG | 0.478703 | 7_3:-63320063 | Msa1115790:CDS |
CCTGTTCAAATAAATCTGTT+GGG | 0.479247 | 7_3:-63319659 | Msa1115790:CDS |
TTTCCATTTGTAGCGACTGT+TGG | 0.485899 | 7_3:+63317965 | None:intergenic |
AGCCTAGAAAGGCGCCGCGC+AGG | 0.486438 | 7_3:+63320399 | None:intergenic |
ACAGTCGCTACAAATGGAAA+TGG | 0.487763 | 7_3:-63317962 | Msa1115790:CDS |
TAGAAAGCAATCGTGGATCA+AGG | 0.491210 | 7_3:-63320872 | Msa1115790:CDS |
GCAGAGAAAGTTGCAGAGGC+AGG | 0.491674 | 7_3:-63318109 | Msa1115790:CDS |
CAGCCGATACATTCCTCGTC+AGG | 0.491975 | 7_3:+63318074 | None:intergenic |
ATATACATGCTTGTAAGCAT+TGG | 0.492208 | 7_3:-63320374 | Msa1115790:CDS |
GGTTCCAGGAGCTGTCTTGG+AGG | 0.494180 | 7_3:-63318517 | Msa1115790:CDS |
AAGGAAATTGAAATCTTGGA+TGG | 0.494656 | 7_3:-63320651 | Msa1115790:CDS |
AAATCTGTTGGGAGGCTGCT+AGG | 0.495687 | 7_3:-63319648 | Msa1115790:CDS |
CCTTACATGCAATCTTCGGT+TGG | 0.498736 | 7_3:-63319687 | Msa1115790:CDS |
CTCTGTCCTCTTCGAGCAGG+AGG | 0.499854 | 7_3:-63319546 | Msa1115790:CDS |
AGATCCAATTGTGGATTCAA+AGG | 0.501615 | 7_3:-63319291 | Msa1115790:CDS |
AAATGGAAAGGTATCCCAAA+TGG | 0.503103 | 7_3:-63320024 | Msa1115790:CDS |
TTGAGATGATAATGAATCCT+TGG | 0.504553 | 7_3:+63320974 | None:intergenic |
AGTAGAGTCGGTGTGGTGGC+AGG | 0.505247 | 7_3:-63319899 | Msa1115790:intron |
CATGCGGTAATGATGTTTCA+AGG | 0.509862 | 7_3:-63320287 | Msa1115790:intron |
GTAAGCATTGGACCCCGAAA+AGG | 0.511380 | 7_3:-63320362 | Msa1115790:CDS |
TTGCTCTTTCTCCAAATCAG+TGG | 0.511690 | 7_3:+63321034 | None:intergenic |
GGAAACTTAAGCTTTGGATC+TGG | 0.513114 | 7_3:-63319251 | Msa1115790:CDS |
TGTGCTGAGCTACCATGCTC+TGG | 0.514422 | 7_3:+63320435 | None:intergenic |
GTAGTGAGAGTGTGTTTAGG+GGG | 0.515035 | 7_3:+63323096 | None:intergenic |
TACCCTACCCGTGTTTCTTG+TGG | 0.519147 | 7_3:-63322949 | Msa1115790:five_prime_UTR |
AGACTTCCCATCATTCCTCT+TGG | 0.520311 | 7_3:+63320056 | None:intergenic |
TGAGGTTGGCTGGGTCAAAT+GGG | 0.521117 | 7_3:-63320083 | Msa1115790:CDS |
GTCCCATTATGAGGTTGGCT+GGG | 0.521850 | 7_3:-63320092 | Msa1115790:CDS |
TTATCAAACAAACACGAAGA+AGG | 0.521915 | 7_3:+63317627 | None:intergenic |
AACAAATAAACTGCAATCAA+AGG | 0.522793 | 7_3:-63320832 | Msa1115790:CDS |
TTACATGCAATCTTCGGTTG+GGG | 0.524263 | 7_3:-63319685 | Msa1115790:CDS |
GTTTCTTCGGAATCTTCTGA+AGG | 0.525949 | 7_3:-63320702 | Msa1115790:CDS |
TTTGCCTGCGATGGCAAGAA+TGG | 0.527794 | 7_3:-63319508 | Msa1115790:intron |
GTGTGGTTGTTTGCCTGCGA+TGG | 0.527869 | 7_3:-63319517 | Msa1115790:CDS |
GTCAAGTCAGTCCCATTATG+AGG | 0.532212 | 7_3:-63320101 | Msa1115790:CDS |
TCTTTCTAAGGCAAACGTAA+AGG | 0.535183 | 7_3:+63319948 | None:intergenic |
TAGTTGATATCTGGCATTTG+TGG | 0.536534 | 7_3:+63317910 | None:intergenic |
AGGCTGCTAGGACCTGCTCT+AGG | 0.537769 | 7_3:-63319636 | Msa1115790:CDS |
CATACCATTCTTGCCATCGC+AGG | 0.538491 | 7_3:+63319504 | None:intergenic |
AGACTCTGTCCTCTTCGAGC+AGG | 0.539604 | 7_3:-63319549 | Msa1115790:CDS |
CATAATGGGACTGACTTGAC+CGG | 0.541186 | 7_3:+63320104 | None:intergenic |
TATAATCAATGAAAGACTGA+TGG | 0.542526 | 7_3:+63318584 | None:intergenic |
CCAAAGCTTAAGTTTCCTGC+GGG | 0.543212 | 7_3:+63319257 | None:intergenic |
CCGTAATGATAAATGAGTGT+GGG | 0.543630 | 7_3:+63322896 | None:intergenic |
TTTGGAATTCTTCATCCCTA+GGG | 0.543710 | 7_3:-63317743 | Msa1115790:three_prime_UTR |
ATTGTTAATGCTGAAGAAAA+CGG | 0.544073 | 7_3:-63320579 | Msa1115790:CDS |
TTGATATCTGGCATTTGTGG+TGG | 0.552983 | 7_3:+63317913 | None:intergenic |
GCGTCAGGACAGAACTCATC+CGG | 0.556096 | 7_3:+63318540 | None:intergenic |
AATTCTTCGGGAATCAGCCT+TGG | 0.558985 | 7_3:-63319336 | Msa1115790:CDS |
GATCTGATATTGGATCAGTT+GGG | 0.559567 | 7_3:+63319309 | None:intergenic |
GGTGAAGATTGGCAAGAGAC+CGG | 0.563020 | 7_3:-63319973 | Msa1115790:CDS |
GCATCAGAATACGACATTGG+AGG | 0.563961 | 7_3:-63317535 | Msa1115790:three_prime_UTR |
CATGTATATAGAGCCTAGAA+AGG | 0.566272 | 7_3:+63320388 | None:intergenic |
AAGAATTGAAAATCTTGAAG+AGG | 0.566537 | 7_3:-63320505 | Msa1115790:CDS |
GCTGTCTTGGAGGCCTTGAA+CGG | 0.568733 | 7_3:-63318507 | Msa1115790:CDS |
TATTCTATTGTACCAGAGCA+TGG | 0.572688 | 7_3:-63320447 | Msa1115790:CDS |
GCTCTAGGTGATCACAATCA+AGG | 0.578230 | 7_3:-63319621 | Msa1115790:CDS |
AGTCAGTCCCATTATGAGGT+TGG | 0.581356 | 7_3:-63320097 | Msa1115790:CDS |
ATCAATGAAAGACTGATGGA+TGG | 0.583203 | 7_3:+63318588 | None:intergenic |
AACCACAAGAAACACGGGTA+GGG | 0.583440 | 7_3:+63322947 | None:intergenic |
TTCACAAGTTACACATCACA+TGG | 0.583442 | 7_3:+63317871 | None:intergenic |
AAGGATTCATTATCATCTCA+AGG | 0.584015 | 7_3:-63320972 | Msa1115790:CDS |
TGATTGTGATCACCTAGAGC+AGG | 0.586194 | 7_3:+63319624 | None:intergenic |
AGAACAGTGAGAACGACGAA+AGG | 0.586884 | 7_3:-63318812 | Msa1115790:CDS |
TACTAGTGATGAAGAACTTG+AGG | 0.587655 | 7_3:-63318035 | Msa1115790:CDS |
AGAAAGCAATCGTGGATCAA+GGG | 0.587886 | 7_3:-63320871 | Msa1115790:CDS |
TTTGATTAAAATATGTACCA+AGG | 0.590671 | 7_3:+63317446 | None:intergenic |
GGCTAGTAGAGTCGGTGTGG+TGG | 0.590826 | 7_3:-63319903 | Msa1115790:CDS |
AATGGTAATCACAAAGAGCA+AGG | 0.592592 | 7_3:-63317944 | Msa1115790:CDS |
TCACCTGACGAGGAATGTAT+CGG | 0.594195 | 7_3:-63318077 | Msa1115790:CDS |
GAGGAAAGTGTCACCTGACG+AGG | 0.594475 | 7_3:-63318087 | Msa1115790:CDS |
CGAGCAGGAGGGCACGAGTG+TGG | 0.595415 | 7_3:-63319534 | Msa1115790:CDS |
GGAACTAACCACAAGAAACA+CGG | 0.597003 | 7_3:+63322941 | None:intergenic |
TCTAATGGCGCTCAAAGTGT+AGG | 0.597901 | 7_3:-63320624 | Msa1115790:CDS |
TCTGCTACATTGGCTGACGA+GGG | 0.600529 | 7_3:+63318127 | None:intergenic |
TGTAGCAGAGAAAGTTGCAG+AGG | 0.600894 | 7_3:-63318113 | Msa1115790:CDS |
AACAGTTAAACACGTTACGT+TGG | 0.601717 | 7_3:+63322920 | None:intergenic |
TATGGATAGAAAAGTCAGCC+AGG | 0.602467 | 7_3:-63318709 | Msa1115790:CDS |
GGTCTGCCAAGAGGAATGAT+GGG | 0.603431 | 7_3:-63320062 | Msa1115790:CDS |
TAATGAATCCTTGGTTGTAT+CGG | 0.604817 | 7_3:+63320983 | None:intergenic |
TCTGCATCACTGAAATGGAA+AGG | 0.604858 | 7_3:-63320036 | Msa1115790:CDS |
GAGAGAAGTTGCTGCTCTCG+AGG | 0.605091 | 7_3:-63320478 | Msa1115790:CDS |
CGGTGAAGGTGAGGATGGTG+CGG | 0.605535 | 7_3:-63320559 | Msa1115790:CDS |
TCGTGCCCTCCTGCTCGAAG+AGG | 0.606373 | 7_3:+63319540 | None:intergenic |
TCCAATATCAGATCCAATTG+TGG | 0.607623 | 7_3:-63319300 | Msa1115790:CDS |
AGTAGTGAGAGTGTGTTTAG+GGG | 0.612474 | 7_3:+63323095 | None:intergenic |
GCTATAAGGGAAGCTTCTAA+CGG | 0.615196 | 7_3:+63318174 | None:intergenic |
GCTACATTGGCTGACGAGGG+AGG | 0.618324 | 7_3:+63318130 | None:intergenic |
CGTAATGATAAATGAGTGTG+GGG | 0.620380 | 7_3:+63322897 | None:intergenic |
AATTATCTCTCTCAGAACAA+TGG | 0.623116 | 7_3:+63320146 | None:intergenic |
CTCGGCTAGTAGAGTCGGTG+TGG | 0.624389 | 7_3:-63319906 | Msa1115790:CDS |
TCCAAAGCTTAAGTTTCCTG+CGG | 0.624548 | 7_3:+63319256 | None:intergenic |
GCATGGTAGCTCAGCACACA+AGG | 0.626811 | 7_3:-63320430 | Msa1115790:CDS |
TAAGCATCAGAATACGACAT+TGG | 0.627866 | 7_3:-63317538 | Msa1115790:three_prime_UTR |
GAGAAAGTTGCAGAGGCAGG+AGG | 0.628672 | 7_3:-63318106 | Msa1115790:CDS |
AATTCTTTAGAAAGCAATCG+TGG | 0.631921 | 7_3:-63320879 | Msa1115790:CDS |
GAAAACGGTGAAGGTGAGGA+TGG | 0.639739 | 7_3:-63320564 | Msa1115790:CDS |
GGAATGTATCGGCTGTTCAG+CGG | 0.639948 | 7_3:-63318066 | Msa1115790:CDS |
TCTGTCCTCTTCGAGCAGGA+GGG | 0.641785 | 7_3:-63319545 | Msa1115790:CDS |
ATGGTAATCACAAAGAGCAA+GGG | 0.648700 | 7_3:-63317943 | Msa1115790:CDS |
GACAAGACAGAAGAGAGAAG+AGG | 0.649310 | 7_3:+63322786 | None:intergenic |
CAGACTTTAGGAGCTTGCCA+AGG | 0.651665 | 7_3:-63321379 | Msa1115790:intron |
GGTCAAATGGGTCTGCCAAG+AGG | 0.653307 | 7_3:-63320071 | Msa1115790:CDS |
TAACCACAAGAAACACGGGT+AGG | 0.653894 | 7_3:+63322946 | None:intergenic |
GAACTAACCACAAGAAACAC+GGG | 0.655458 | 7_3:+63322942 | None:intergenic |
ACCGTAATGATAAATGAGTG+TGG | 0.658409 | 7_3:+63322895 | None:intergenic |
TAGAAGCTTCCCTTATAGCG+CGG | 0.662446 | 7_3:-63318170 | Msa1115790:CDS |
GGTTCTCTGTAACTTCACTC+CGG | 0.666443 | 7_3:-63318559 | Msa1115790:CDS |
GTATCGGCTGTTCAGCGGAG+AGG | 0.668187 | 7_3:-63318061 | Msa1115790:CDS |
GAGAACGACGAAAGGCGAGG+TGG | 0.669891 | 7_3:-63318804 | Msa1115790:CDS |
GGATGATGTCAACAGGTCCG+AGG | 0.673674 | 7_3:-63321102 | Msa1115790:intron |
TGGATCAGTTGGGATCTCCA+AGG | 0.674303 | 7_3:+63319319 | None:intergenic |
ACAACACATTACTAATCCCG+AGG | 0.675280 | 7_3:-63323035 | Msa1115790:five_prime_UTR |
GTTCAAATAAATCTGTTGGG+AGG | 0.678740 | 7_3:-63319656 | Msa1115790:CDS |
TGATGTCAACAGGTCCGAGG+AGG | 0.681847 | 7_3:-63321099 | Msa1115790:intron |
AGTGAGAACGACGAAAGGCG+AGG | 0.682233 | 7_3:-63318807 | Msa1115790:CDS |
CTTGGAGGCCTTGAACGGAG+AGG | 0.685220 | 7_3:-63318502 | Msa1115790:intron |
TTATCAATGATAGATGAAAG+CGG | 0.690703 | 7_3:+63318001 | None:intergenic |
GGATGAGTTCTGTCCTGACG+CGG | 0.692057 | 7_3:-63318538 | Msa1115790:CDS |
TGAAGAAAACGGTGAAGGTG+AGG | 0.702094 | 7_3:-63320568 | Msa1115790:CDS |
AATGCTGAAGAAAACGGTGA+AGG | 0.708600 | 7_3:-63320573 | Msa1115790:CDS |
TGTGGAGCGAAGAATGTCAG+CGG | 0.711706 | 7_3:-63318200 | Msa1115790:CDS |
ACAAGGTTCACACACCTGCG+CGG | 0.727930 | 7_3:-63320413 | Msa1115790:CDS |
ATACGACACCGATACAACCA+AGG | 0.730986 | 7_3:-63320991 | Msa1115790:CDS |
GGATAGAAAAGTCAGCCAGG+AGG | 0.755346 | 7_3:-63318706 | Msa1115790:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTTAAAAAAAAATAATT+GGG | - | chr7_3:63320681-63320700 | Msa1115790:CDS | 0.0% |
!!! | AGTTTTTTTTTTTTTTTTGA+AGG | - | chr7_3:63318213-63318232 | Msa1115790:intron | 10.0% |
!! | ATAAGAATATTGAAAATTAT+TGG | - | chr7_3:63318269-63318288 | Msa1115790:intron | 10.0% |
!! | AATAAAATAAAAAAATCTGA+TGG | + | chr7_3:63318422-63318441 | None:intergenic | 10.0% |
!! | GAAAATTTGAATTTATAATT+TGG | - | chr7_3:63321386-63321405 | Msa1115790:five_prime_UTR | 10.0% |
!! | TTAGTCAAAAGTTAATTAAA+AGG | - | chr7_3:63318160-63318179 | Msa1115790:CDS | 15.0% |
!! | AATTTGAGAAAATGAAATAA+TGG | + | chr7_3:63318531-63318550 | None:intergenic | 15.0% |
!! | AAATCTATAAACTCAAATAA+AGG | - | chr7_3:63319742-63319761 | Msa1115790:intron | 15.0% |
!! | TCATAAATTAAATACTTATG+TGG | - | chr7_3:63321854-63321873 | Msa1115790:intron | 15.0% |
!!! | GTTTATTTTTATTATTATGC+AGG | - | chr7_3:63321915-63321934 | Msa1115790:intron | 15.0% |
!!! | ATTTTATCTTTAGATTATTG+TGG | - | chr7_3:63322313-63322332 | Msa1115790:intron | 15.0% |
!! | ATTCAGAAGATTAAAAAATA+TGG | - | chr7_3:63322747-63322766 | Msa1115790:intron | 15.0% |
!! | AAATTGTACGTTAAAATGAT+AGG | + | chr7_3:63317548-63317567 | None:intergenic | 20.0% |
!! | GGAAACAAAATTAAAGAAAA+AGG | + | chr7_3:63317895-63317914 | None:intergenic | 20.0% |
!! | AATTAAAGTACGAAATGAAA+TGG | + | chr7_3:63318035-63318054 | None:intergenic | 20.0% |
!! | TAAATTAAGATCTAGGAATT+AGG | + | chr7_3:63318124-63318143 | None:intergenic | 20.0% |
!! | AAAATAAAAAAATCTGATGG+TGG | + | chr7_3:63318419-63318438 | None:intergenic | 20.0% |
!! | TTAATTTCACTACTTAAGAT+TGG | - | chr7_3:63318607-63318626 | Msa1115790:intron | 20.0% |
!!! | GTCCAATTTTTTTTTTATAC+TGG | - | chr7_3:63318777-63318796 | Msa1115790:CDS | 20.0% |
!!! | CTTTATGGTTTTTCATTTTT+TGG | - | chr7_3:63318876-63318895 | Msa1115790:CDS | 20.0% |
!!! | TCATATCTCTTGAATTTTAT+TGG | - | chr7_3:63318950-63318969 | Msa1115790:intron | 20.0% |
!!! | ATAAGTTTCTGAATTTTCTA+AGG | + | chr7_3:63319388-63319407 | None:intergenic | 20.0% |
!! | GGAATCAAAAATTAAAGAAA+TGG | - | chr7_3:63319999-63320018 | Msa1115790:CDS | 20.0% |
!! | TAAAAAAAAATAATTGGGGA+AGG | - | chr7_3:63320686-63320705 | Msa1115790:CDS | 20.0% |
!! | AAAAAAAAATAATTGGGGAA+GGG | - | chr7_3:63320687-63320706 | Msa1115790:CDS | 20.0% |
!!! | CTTTTTGTTTTTATACTGAT+CGG | - | chr7_3:63321334-63321353 | Msa1115790:intron | 20.0% |
!! | AAACTTGATATAACTACAAA+TGG | - | chr7_3:63321492-63321511 | Msa1115790:intron | 20.0% |
!!! | TTTGTCATATAATTGATTTG+AGG | - | chr7_3:63321533-63321552 | Msa1115790:intron | 20.0% |
!! | ATAAATACAATGACAATGTA+AGG | + | chr7_3:63321891-63321910 | None:intergenic | 20.0% |
!!! | CATTGTCATTGTATTTATTT+TGG | - | chr7_3:63321893-63321912 | Msa1115790:intron | 20.0% |
!! | TGAAATTAAAATTGCAGTAA+AGG | + | chr7_3:63322223-63322242 | None:intergenic | 20.0% |
!!! | AATAAACAGACAAGATATTT+TGG | - | chr7_3:63322770-63322789 | Msa1115790:five_prime_UTR | 20.0% |
!! | TATTTATATACACCCAAAAA+AGG | + | chr7_3:63322837-63322856 | None:intergenic | 20.0% |
!! | TTTGATTAAAATATGTACCA+AGG | + | chr7_3:63323088-63323107 | None:intergenic | 20.0% |
! | GAAAGAAAATAGTAGTGATA+GGG | + | chr7_3:63317873-63317892 | None:intergenic | 25.0% |
! | AACAAATTGTGTTAATGTAG+CGG | - | chr7_3:63318078-63318097 | Msa1115790:CDS | 25.0% |
! | GAATGGTTAAATTAAGATCT+AGG | + | chr7_3:63318131-63318150 | None:intergenic | 25.0% |
!!! | AACTTTTGACTAAATCAACA+AGG | + | chr7_3:63318153-63318172 | None:intergenic | 25.0% |
! | TTGTTCACAAATATAATGAG+TGG | - | chr7_3:63318453-63318472 | Msa1115790:intron | 25.0% |
! | TACTACATAGATTGTATGTT+TGG | - | chr7_3:63318566-63318585 | Msa1115790:CDS | 25.0% |
!! | TTGTATGTTTGGTTCATTAT+AGG | - | chr7_3:63318577-63318596 | Msa1115790:CDS | 25.0% |
! | GGCCAGTATAAAAAAAAAAT+TGG | + | chr7_3:63318782-63318801 | None:intergenic | 25.0% |
! | AGAAAAAATCAAGAAAAGCA+TGG | + | chr7_3:63318979-63318998 | None:intergenic | 25.0% |
!!! | TTTAAGCACTATATTTTTGC+AGG | - | chr7_3:63319029-63319048 | Msa1115790:intron | 25.0% |
! | AAAAGAAACTGAATCTAAGA+CGG | - | chr7_3:63319362-63319381 | Msa1115790:CDS | 25.0% |
! | GAAAATCTAGTTACATTATG+TGG | - | chr7_3:63319408-63319427 | Msa1115790:intron | 25.0% |
! | TTCAAAAGATCCAAAAAGTA+AGG | - | chr7_3:63319621-63319640 | Msa1115790:CDS | 25.0% |
! | AACAAATAAACTGCAATCAA+AGG | - | chr7_3:63319699-63319718 | Msa1115790:CDS | 25.0% |
! | ATTGTTAATGCTGAAGAAAA+CGG | - | chr7_3:63319952-63319971 | Msa1115790:CDS | 25.0% |
! | AAGAATTGAAAATCTTGAAG+AGG | - | chr7_3:63320026-63320045 | Msa1115790:CDS | 25.0% |
! | ATGATTTAGCAACCAAAATA+AGG | + | chr7_3:63320227-63320246 | None:intergenic | 25.0% |
! | AGATAATTTCACAAGCATTT+GGG | - | chr7_3:63320400-63320419 | Msa1115790:CDS | 25.0% |
! | AAAAAAAATAATTGGGGAAG+GGG | - | chr7_3:63320688-63320707 | Msa1115790:CDS | 25.0% |
!! | TATTTTACAATCATCCTGAA+GGG | - | chr7_3:63320750-63320769 | Msa1115790:CDS | 25.0% |
! | ACTAAAAACATAATCAAGCA+AGG | + | chr7_3:63321070-63321089 | None:intergenic | 25.0% |
! | TAGATTAAAATTCATTCACC+AGG | - | chr7_3:63321126-63321145 | Msa1115790:intron | 25.0% |
! | TTCATAGATACTGTAAAGAA+TGG | + | chr7_3:63321460-63321479 | None:intergenic | 25.0% |
!!! | AAATGGATTAGCAAAATATG+CGG | - | chr7_3:63321509-63321528 | Msa1115790:intron | 25.0% |
! | AATTTATGAAATTAACCTCC+TGG | + | chr7_3:63321843-63321862 | None:intergenic | 25.0% |
! | TATAATCAATGAAAGACTGA+TGG | + | chr7_3:63321950-63321969 | None:intergenic | 25.0% |
!! | TCAGTCTTTCATTGATTATA+CGG | - | chr7_3:63321950-63321969 | Msa1115790:intron | 25.0% |
!!! | ACTGCAATTTTAATTTCACT+TGG | - | chr7_3:63322225-63322244 | Msa1115790:intron | 25.0% |
! | TTATCAATGATAGATGAAAG+CGG | + | chr7_3:63322533-63322552 | None:intergenic | 25.0% |
! | CTAAAGTAAAAATGAATGTC+AGG | - | chr7_3:63322708-63322727 | Msa1115790:intron | 25.0% |
! | AAAATGAATGTCAGGAATTT+AGG | - | chr7_3:63322716-63322735 | Msa1115790:intron | 25.0% |
! | ATTCTTTAATGCTACTCTTA+AGG | + | chr7_3:63322865-63322884 | None:intergenic | 25.0% |
! | TCATCGATATATGCTTATTA+AGG | - | chr7_3:63323039-63323058 | Msa1115790:five_prime_UTR | 25.0% |
! | TATATGCTTATTAAGGATGA+TGG | - | chr7_3:63323046-63323065 | Msa1115790:five_prime_UTR | 25.0% |
!!! | TTATTAAGGATGATGGATTT+AGG | - | chr7_3:63323053-63323072 | Msa1115790:five_prime_UTR | 25.0% |
GAAACGAAACGAAAAGAAAA+AGG | + | chr7_3:63317770-63317789 | None:intergenic | 30.0% | |
GGAAAGAAAATAGTAGTGAT+AGG | + | chr7_3:63317874-63317893 | None:intergenic | 30.0% | |
TTGACTAAATCAACAAGGAA+TGG | + | chr7_3:63318148-63318167 | None:intergenic | 30.0% | |
!! | TGATTTGATGATGATGTTGA+CGG | - | chr7_3:63318330-63318349 | Msa1115790:intron | 30.0% |
CACAAATATAATGAGTGGTA+TGG | - | chr7_3:63318458-63318477 | Msa1115790:intron | 30.0% | |
CAAAATGTGTACACAACAAA+TGG | + | chr7_3:63318708-63318727 | None:intergenic | 30.0% | |
TTAACCCCACTTTCTAATTA+AGG | - | chr7_3:63318742-63318761 | Msa1115790:CDS | 30.0% | |
AAGACCTTAATTAGAAAGTG+GGG | + | chr7_3:63318749-63318768 | None:intergenic | 30.0% | |
GAAGACCTTAATTAGAAAGT+GGG | + | chr7_3:63318750-63318769 | None:intergenic | 30.0% | |
TGAAGACCTTAATTAGAAAG+TGG | + | chr7_3:63318751-63318770 | None:intergenic | 30.0% | |
ATCAATTGCAACAGAAAGAA+GGG | + | chr7_3:63318823-63318842 | None:intergenic | 30.0% | |
AATCAATTGCAACAGAAAGA+AGG | + | chr7_3:63318824-63318843 | None:intergenic | 30.0% | |
ATCACAATGAGAATCAAAAC+AGG | + | chr7_3:63318902-63318921 | None:intergenic | 30.0% | |
TTGATTCTCATTGTGATGAA+TGG | - | chr7_3:63318905-63318924 | Msa1115790:intron | 30.0% | |
! | TAAAAGTGCATACACAATCT+TGG | + | chr7_3:63319096-63319115 | None:intergenic | 30.0% |
! | TTGTGTATGCACTTTTATGT+TGG | - | chr7_3:63319099-63319118 | Msa1115790:intron | 30.0% |
ATGATAGGATTTACTAACCT+TGG | + | chr7_3:63319172-63319191 | None:intergenic | 30.0% | |
TGAAAGAAATTGAGAAGAGA+AGG | - | chr7_3:63319247-63319266 | Msa1115790:CDS | 30.0% | |
GAAAGAAATTGAGAAGAGAA+GGG | - | chr7_3:63319248-63319267 | Msa1115790:CDS | 30.0% | |
AAAGAAATTGAGAAGAGAAG+GGG | - | chr7_3:63319249-63319268 | Msa1115790:CDS | 30.0% | |
AGAGTTCAAAAAGAACAGAA+AGG | - | chr7_3:63319292-63319311 | Msa1115790:CDS | 30.0% | |
TAATGAATCCTTGGTTGTAT+CGG | + | chr7_3:63319551-63319570 | None:intergenic | 30.0% | |
! | TTGAGATGATAATGAATCCT+TGG | + | chr7_3:63319560-63319579 | None:intergenic | 30.0% |
AAGGATTCATTATCATCTCA+AGG | - | chr7_3:63319559-63319578 | Msa1115790:CDS | 30.0% | |
! | AATTCTTTAGAAAGCAATCG+TGG | - | chr7_3:63319652-63319671 | Msa1115790:CDS | 30.0% |
TGATGAAAAACCTGTTATAG+AGG | - | chr7_3:63319855-63319874 | Msa1115790:intron | 30.0% | |
AAAACCTGTTATAGAGGTTA+AGG | - | chr7_3:63319861-63319880 | Msa1115790:intron | 30.0% | |
ATTTCCTTAACCTCTATAAC+AGG | + | chr7_3:63319868-63319887 | None:intergenic | 30.0% | |
GGTTAAGGAAATTGAAATCT+TGG | - | chr7_3:63319876-63319895 | Msa1115790:intron | 30.0% | |
AAGGAAATTGAAATCTTGGA+TGG | - | chr7_3:63319880-63319899 | Msa1115790:intron | 30.0% | |
ATATACATGCTTGTAAGCAT+TGG | - | chr7_3:63320157-63320176 | Msa1115790:CDS | 30.0% | |
!!! | ATTTTGGTTGCTAAATCATG+CGG | - | chr7_3:63320228-63320247 | Msa1115790:intron | 30.0% |
AATTATCTCTCTCAGAACAA+TGG | + | chr7_3:63320388-63320407 | None:intergenic | 30.0% | |
GAGATAATTTCACAAGCATT+TGG | - | chr7_3:63320399-63320418 | Msa1115790:CDS | 30.0% | |
CATTTCCTGATTTACCATTT+GGG | + | chr7_3:63320524-63320543 | None:intergenic | 30.0% | |
! | CTATTTTACAATCATCCTGA+AGG | - | chr7_3:63320749-63320768 | Msa1115790:CDS | 30.0% |
TCCTGTTCAAATAAATCTGT+TGG | - | chr7_3:63320871-63320890 | Msa1115790:CDS | 30.0% | |
CCTGTTCAAATAAATCTGTT+GGG | - | chr7_3:63320872-63320891 | Msa1115790:CDS | 30.0% | |
TTAATCTACTCAATCCTTTG+AGG | + | chr7_3:63321114-63321133 | None:intergenic | 30.0% | |
AAAACCTTTGAATCCACAAT+TGG | + | chr7_3:63321247-63321266 | None:intergenic | 30.0% | |
!! | TATAATTGATTTGAGGCATG+TGG | - | chr7_3:63321540-63321559 | Msa1115790:intron | 30.0% |
TAACTCTTCCATAAGCATAA+AGG | + | chr7_3:63321614-63321633 | None:intergenic | 30.0% | |
! | TATCCATAAGCATGTCTTTT+GGG | + | chr7_3:63321810-63321829 | None:intergenic | 30.0% |
! | CAGTCTTTCATTGATTATAC+GGG | - | chr7_3:63321951-63321970 | Msa1115790:intron | 30.0% |
! | ATTTTTCTTGTCTGTTACGA+AGG | - | chr7_3:63322062-63322081 | Msa1115790:intron | 30.0% |
! | TTCTCCACTAATGATAATGT+TGG | - | chr7_3:63322107-63322126 | Msa1115790:intron | 30.0% |
! | GAAGTATTCTGAATCTGAAA+TGG | - | chr7_3:63322190-63322209 | Msa1115790:intron | 30.0% |
ATTTCACTTGGCACATATTT+CGG | - | chr7_3:63322237-63322256 | Msa1115790:intron | 30.0% | |
GCTTTCATCTATCATTGATA+AGG | - | chr7_3:63322532-63322551 | Msa1115790:intron | 30.0% | |
!!! | TCAATTTCCCTTCCTTTTTT+GGG | - | chr7_3:63322822-63322841 | Msa1115790:five_prime_UTR | 30.0% |
ATATACACCCAAAAAAGGAA+GGG | + | chr7_3:63322832-63322851 | None:intergenic | 30.0% | |
TATATACACCCAAAAAAGGA+AGG | + | chr7_3:63322833-63322852 | None:intergenic | 30.0% | |
TTATCAAACAAACACGAAGA+AGG | + | chr7_3:63322907-63322926 | None:intergenic | 30.0% | |
! | GTGTACAAACTTCTTTTACA+AGG | - | chr7_3:63322968-63322987 | Msa1115790:five_prime_UTR | 30.0% |
!! | ATGATGGATTTAGGAATTCA+TGG | - | chr7_3:63323062-63323081 | Msa1115790:five_prime_UTR | 30.0% |
! | TAGTAGTGAGAGTGTGTTTA+GGG | + | chr7_3:63317440-63317459 | None:intergenic | 35.0% |
! | TTAGTAGTGAGAGTGTGTTT+AGG | + | chr7_3:63317441-63317460 | None:intergenic | 35.0% |
!!! | TCGTTCTGTGTTTTTTGTAG+TGG | + | chr7_3:63317471-63317490 | None:intergenic | 35.0% |
AGAGAAAAAGAGAAATCCTC+GGG | + | chr7_3:63317515-63317534 | None:intergenic | 35.0% | |
CAGAGAAAAAGAGAAATCCT+CGG | + | chr7_3:63317516-63317535 | None:intergenic | 35.0% | |
AACAGTTAAACACGTTACGT+TGG | + | chr7_3:63317614-63317633 | None:intergenic | 35.0% | |
CGTAATGATAAATGAGTGTG+GGG | + | chr7_3:63317637-63317656 | None:intergenic | 35.0% | |
CCGTAATGATAAATGAGTGT+GGG | + | chr7_3:63317638-63317657 | None:intergenic | 35.0% | |
CCCACACTCATTTATCATTA+CGG | - | chr7_3:63317635-63317654 | Msa1115790:three_prime_UTR | 35.0% | |
ACCGTAATGATAAATGAGTG+TGG | + | chr7_3:63317639-63317658 | None:intergenic | 35.0% | |
GTAGTACATACAAACAGAGA+AGG | + | chr7_3:63317916-63317935 | None:intergenic | 35.0% | |
GGAAAATGAAGTTACGTAGA+AGG | + | chr7_3:63318008-63318027 | None:intergenic | 35.0% | |
AGTACGAAATGAAATGGAGA+TGG | + | chr7_3:63318029-63318048 | None:intergenic | 35.0% | |
TTTCTTCATACTCTACTGCT+AGG | - | chr7_3:63318369-63318388 | Msa1115790:intron | 35.0% | |
!! | AAAAATCTGATGGTGGAGTA+GGG | + | chr7_3:63318412-63318431 | None:intergenic | 35.0% |
!! | AAAAAATCTGATGGTGGAGT+AGG | + | chr7_3:63318413-63318432 | None:intergenic | 35.0% |
!! | CACACAATTCTGGTTCAATT+AGG | + | chr7_3:63318635-63318654 | None:intergenic | 35.0% |
AGTCATTTGACACACAATTC+TGG | + | chr7_3:63318645-63318664 | None:intergenic | 35.0% | |
! | TACTGGCCTGAAATTTAATC+TGG | - | chr7_3:63318794-63318813 | Msa1115790:CDS | 35.0% |
TTCTGCACTTGTCTTCTTTA+TGG | - | chr7_3:63318861-63318880 | Msa1115790:CDS | 35.0% | |
TCTCATTGTGATGAATGGTT+TGG | - | chr7_3:63318910-63318929 | Msa1115790:intron | 35.0% | |
!! | CACTATATTTTTGCAGGTAG+TGG | - | chr7_3:63319035-63319054 | Msa1115790:intron | 35.0% |
AACTTCTCAGAATTGTGCTT+CGG | + | chr7_3:63319131-63319150 | None:intergenic | 35.0% | |
TCTGAGAAGTTACAGACTTT+AGG | - | chr7_3:63319140-63319159 | Msa1115790:intron | 35.0% | |
TTGTGACAGGAGAAAATGAT+AGG | + | chr7_3:63319187-63319206 | None:intergenic | 35.0% | |
ATTATGTGGATGATGTCAAC+AGG | - | chr7_3:63319422-63319441 | Msa1115790:intron | 35.0% | |
! | TGATAATCACTCCACTGATT+TGG | - | chr7_3:63319486-63319505 | Msa1115790:intron | 35.0% |
TTGGAGAAAGAGCAAAAAGA+AGG | - | chr7_3:63319505-63319524 | Msa1115790:intron | 35.0% | |
TGGAGAAAGAGCAAAAAGAA+GGG | - | chr7_3:63319506-63319525 | Msa1115790:intron | 35.0% | |
!! | TTCGCTCTAACCTTACTTTT+TGG | + | chr7_3:63319634-63319653 | None:intergenic | 35.0% |
AAACTGCAATCAAAGGTAAC+AGG | - | chr7_3:63319706-63319725 | Msa1115790:intron | 35.0% | |
!! | CTTTTGTTTGTAACTCTTGC+AGG | + | chr7_3:63319769-63319788 | None:intergenic | 35.0% |
!! | AACTTTCACTGGCTTAGTAT+TGG | + | chr7_3:63319800-63319819 | None:intergenic | 35.0% |
AGTTCCTGCAAAAGTTTCTT+CGG | - | chr7_3:63319816-63319835 | Msa1115790:intron | 35.0% | |
ATCTTGGATGGATCTTCTAA+TGG | - | chr7_3:63319892-63319911 | Msa1115790:intron | 35.0% | |
TATTCTATTGTACCAGAGCA+TGG | - | chr7_3:63320084-63320103 | Msa1115790:CDS | 35.0% | |
CATGTATATAGAGCCTAGAA+AGG | + | chr7_3:63320146-63320165 | None:intergenic | 35.0% | |
!!! | AATTGTTGCTTTCCTTTTCG+GGG | + | chr7_3:63320184-63320203 | None:intergenic | 35.0% |
!!! | CAATTGTTGCTTTCCTTTTC+GGG | + | chr7_3:63320185-63320204 | None:intergenic | 35.0% |
!!! | GCAATTGTTGCTTTCCTTTT+CGG | + | chr7_3:63320186-63320205 | None:intergenic | 35.0% |
ATTGCCAAGAATACTGTTTC+TGG | - | chr7_3:63320201-63320220 | Msa1115790:intron | 35.0% | |
!!! | TACTGTTTCTGGCCTTATTT+TGG | - | chr7_3:63320212-63320231 | Msa1115790:intron | 35.0% |
! | TGTGATTCAGGTTAACTTTC+TGG | - | chr7_3:63320352-63320371 | Msa1115790:CDS | 35.0% |
!! | AAATGGAAAGGTATCCCAAA+TGG | - | chr7_3:63320507-63320526 | Msa1115790:CDS | 35.0% |
CCATTTCCTGATTTACCATT+TGG | + | chr7_3:63320525-63320544 | None:intergenic | 35.0% | |
CCAAATGGTAAATCAGGAAA+TGG | - | chr7_3:63320522-63320541 | Msa1115790:CDS | 35.0% | |
!! | TCTTTCTAAGGCAAACGTAA+AGG | + | chr7_3:63320586-63320605 | None:intergenic | 35.0% |
! | TCGAATCATGGATCTTTTCT+CGG | - | chr7_3:63320607-63320626 | Msa1115790:CDS | 35.0% |
TATTGCAGATGGAACTTCTA+GGG | + | chr7_3:63320789-63320808 | None:intergenic | 35.0% | |
TTATTGCAGATGGAACTTCT+AGG | + | chr7_3:63320790-63320809 | None:intergenic | 35.0% | |
ACTTCTCAGTTTATTGCAGA+TGG | + | chr7_3:63320800-63320819 | None:intergenic | 35.0% | |
!!! | GAGAAGTGTTCTATGCTTTT+AGG | - | chr7_3:63320813-63320832 | Msa1115790:CDS | 35.0% |
CCCAACAGATTTATTTGAAC+AGG | + | chr7_3:63320875-63320894 | None:intergenic | 35.0% | |
GTTCAAATAAATCTGTTGGG+AGG | - | chr7_3:63320875-63320894 | Msa1115790:CDS | 35.0% | |
! | GAAACTTTTCCATCAATCTC+TGG | - | chr7_3:63320932-63320951 | Msa1115790:CDS | 35.0% |
!! | AGAGTCTTTGAAAAGCATCT+TGG | + | chr7_3:63320969-63320988 | None:intergenic | 35.0% |
GAGGCTTAGAACAAAAGAAT+GGG | + | chr7_3:63321095-63321114 | None:intergenic | 35.0% | |
TGAGGCTTAGAACAAAAGAA+TGG | + | chr7_3:63321096-63321115 | None:intergenic | 35.0% | |
!! | TCTTTTGTTCTAAGCCTCAA+AGG | - | chr7_3:63321097-63321116 | Msa1115790:intron | 35.0% |
AAAATTCATTCACCAGGTCA+TGG | - | chr7_3:63321132-63321151 | Msa1115790:intron | 35.0% | |
CGATGTTCAATGCAATTCTT+CGG | - | chr7_3:63321182-63321201 | Msa1115790:intron | 35.0% | |
GATGTTCAATGCAATTCTTC+GGG | - | chr7_3:63321183-63321202 | Msa1115790:intron | 35.0% | |
GATCTGATATTGGATCAGTT+GGG | + | chr7_3:63321225-63321244 | None:intergenic | 35.0% | |
TCCAATATCAGATCCAATTG+TGG | - | chr7_3:63321231-63321250 | Msa1115790:intron | 35.0% | |
TCCACAATTGGATCTGATAT+TGG | + | chr7_3:63321235-63321254 | None:intergenic | 35.0% | |
AGATCCAATTGTGGATTCAA+AGG | - | chr7_3:63321240-63321259 | Msa1115790:intron | 35.0% | |
TGGTGCACAGCTAAAAAATT+CGG | - | chr7_3:63321300-63321319 | Msa1115790:intron | 35.0% | |
AGATTGCTCACTGATATGTT+TGG | - | chr7_3:63321661-63321680 | Msa1115790:intron | 35.0% | |
CATTGATGCTGAAGATTGTT+CGG | - | chr7_3:63321684-63321703 | Msa1115790:intron | 35.0% | |
! | CTATCCATAAGCATGTCTTT+TGG | + | chr7_3:63321811-63321830 | None:intergenic | 35.0% |
ATCAATGAAAGACTGATGGA+TGG | + | chr7_3:63321946-63321965 | None:intergenic | 35.0% | |
TACGCCAACATTATCATTAG+TGG | + | chr7_3:63322114-63322133 | None:intergenic | 35.0% | |
TTCCTTTGCTAATGCAAACT+CGG | + | chr7_3:63322161-63322180 | None:intergenic | 35.0% | |
TACTAGTGATGAAGAACTTG+AGG | - | chr7_3:63322496-63322515 | Msa1115790:intron | 35.0% | |
AATGGTAATCACAAAGAGCA+AGG | - | chr7_3:63322587-63322606 | Msa1115790:intron | 35.0% | |
ATGGTAATCACAAAGAGCAA+GGG | - | chr7_3:63322588-63322607 | Msa1115790:intron | 35.0% | |
! | TAGTTGATATCTGGCATTTG+TGG | + | chr7_3:63322624-63322643 | None:intergenic | 35.0% |
! | TTCACGAAGTAGTTGATATC+TGG | + | chr7_3:63322633-63322652 | None:intergenic | 35.0% |
ATCAACTACTTCGTGAAGTT+TGG | - | chr7_3:63322636-63322655 | Msa1115790:intron | 35.0% | |
TTCACAAGTTACACATCACA+TGG | + | chr7_3:63322663-63322682 | None:intergenic | 35.0% | |
!!! | TTTTGGAATTCTTCATCCCT+AGG | - | chr7_3:63322787-63322806 | Msa1115790:five_prime_UTR | 35.0% |
! | TTTGGAATTCTTCATCCCTA+GGG | - | chr7_3:63322788-63322807 | Msa1115790:five_prime_UTR | 35.0% |
TTCATCCCTAGGGAAAATTA+AGG | - | chr7_3:63322798-63322817 | Msa1115790:five_prime_UTR | 35.0% | |
! | TTGAGCCTTAATTTTCCCTA+GGG | + | chr7_3:63322806-63322825 | None:intergenic | 35.0% |
! | ATTGAGCCTTAATTTTCCCT+AGG | + | chr7_3:63322807-63322826 | None:intergenic | 35.0% |
!!! | CTCAATTTCCCTTCCTTTTT+TGG | - | chr7_3:63322821-63322840 | Msa1115790:five_prime_UTR | 35.0% |
TAAGCATCAGAATACGACAT+TGG | - | chr7_3:63322993-63323012 | Msa1115790:five_prime_UTR | 35.0% | |
! | AGTAGTGAGAGTGTGTTTAG+GGG | + | chr7_3:63317439-63317458 | None:intergenic | 40.0% |
ACAACACATTACTAATCCCG+AGG | - | chr7_3:63317496-63317515 | Msa1115790:three_prime_UTR | 40.0% | |
GAACTAACCACAAGAAACAC+GGG | + | chr7_3:63317592-63317611 | None:intergenic | 40.0% | |
GGAACTAACCACAAGAAACA+CGG | + | chr7_3:63317593-63317612 | None:intergenic | 40.0% | |
!! | AAAATCTGATGGTGGAGTAG+GGG | + | chr7_3:63318411-63318430 | None:intergenic | 40.0% |
TGGCCTGAAATTTAATCTGG+TGG | - | chr7_3:63318797-63318816 | Msa1115790:CDS | 40.0% | |
!!! | ACATTGCTGTTTTGAGTCTC+TGG | - | chr7_3:63319059-63319078 | Msa1115790:intron | 40.0% |
CAAATGAAGAAGCTTGTGAC+AGG | + | chr7_3:63319200-63319219 | None:intergenic | 40.0% | |
TTGCTCTTTCTCCAAATCAG+TGG | + | chr7_3:63319500-63319519 | None:intergenic | 40.0% | |
TAGAAAGCAATCGTGGATCA+AGG | - | chr7_3:63319659-63319678 | Msa1115790:CDS | 40.0% | |
AGAAAGCAATCGTGGATCAA+GGG | - | chr7_3:63319660-63319679 | Msa1115790:CDS | 40.0% | |
! | ACTTTTGCAGGAACTTTCAC+TGG | + | chr7_3:63319811-63319830 | None:intergenic | 40.0% |
! | GATTCCGAAGAAACTTTTGC+AGG | + | chr7_3:63319823-63319842 | None:intergenic | 40.0% |
GTTTCTTCGGAATCTTCTGA+AGG | - | chr7_3:63319829-63319848 | Msa1115790:intron | 40.0% | |
AATGCTGAAGAAAACGGTGA+AGG | - | chr7_3:63319958-63319977 | Msa1115790:CDS | 40.0% | |
AAGGCCAGAAACAGTATTCT+TGG | + | chr7_3:63320208-63320227 | None:intergenic | 40.0% | |
CATGCGGTAATGATGTTTCA+AGG | - | chr7_3:63320244-63320263 | Msa1115790:intron | 40.0% | |
CTGAATCACAAGTCAAGATG+CGG | + | chr7_3:63320342-63320361 | None:intergenic | 40.0% | |
TCACAAGCATTTGGGAATTC+CGG | - | chr7_3:63320408-63320427 | Msa1115790:CDS | 40.0% | |
TCTGCATCACTGAAATGGAA+AGG | - | chr7_3:63320495-63320514 | Msa1115790:CDS | 40.0% | |
GGTATCCCAAATGGTAAATC+AGG | - | chr7_3:63320516-63320535 | Msa1115790:CDS | 40.0% | |
!!! | GGAAATGGTTTTATGCAGAC+CGG | - | chr7_3:63320537-63320556 | Msa1115790:CDS | 40.0% |
TAAGGCAAACGTAAAGGTTC+CGG | + | chr7_3:63320580-63320599 | None:intergenic | 40.0% | |
CCATGATTCGACTCTTTCTA+AGG | + | chr7_3:63320598-63320617 | None:intergenic | 40.0% | |
CCTTAGAAAGAGTCGAATCA+TGG | - | chr7_3:63320595-63320614 | Msa1115790:CDS | 40.0% | |
GGTAGAGTTTAAATCCCTTC+AGG | + | chr7_3:63320767-63320786 | None:intergenic | 40.0% | |
ATTGCAGATGGAACTTCTAG+GGG | + | chr7_3:63320788-63320807 | None:intergenic | 40.0% | |
GACTCCTTACATGCAATCTT+CGG | - | chr7_3:63320840-63320859 | Msa1115790:CDS | 40.0% | |
CTTACATGCAATCTTCGGTT+GGG | - | chr7_3:63320845-63320864 | Msa1115790:CDS | 40.0% | |
TTACATGCAATCTTCGGTTG+GGG | - | chr7_3:63320846-63320865 | Msa1115790:CDS | 40.0% | |
GGATCTGATATTGGATCAGT+TGG | + | chr7_3:63321226-63321245 | None:intergenic | 40.0% | |
TCCAAAGCTTAAGTTTCCTG+CGG | + | chr7_3:63321278-63321297 | None:intergenic | 40.0% | |
!! | GGAAACTTAAGCTTTGGATC+TGG | - | chr7_3:63321280-63321299 | Msa1115790:intron | 40.0% |
TCTTCGCTATCACATCTTAG+AGG | - | chr7_3:63321425-63321444 | Msa1115790:five_prime_UTR | 40.0% | |
CTTCGCTATCACATCTTAGA+GGG | - | chr7_3:63321426-63321445 | Msa1115790:five_prime_UTR | 40.0% | |
! | CCATAAGCATAAAGGTGTGT+AGG | + | chr7_3:63321606-63321625 | None:intergenic | 40.0% |
CCTACACACCTTTATGCTTA+TGG | - | chr7_3:63321603-63321622 | Msa1115790:intron | 40.0% | |
!!! | TGTCTTTTGGGAGCATTAGA+AGG | + | chr7_3:63321798-63321817 | None:intergenic | 40.0% |
TATGGATAGAAAAGTCAGCC+AGG | - | chr7_3:63321822-63321841 | Msa1115790:intron | 40.0% | |
GCTATAAGGGAAGCTTCTAA+CGG | + | chr7_3:63322360-63322379 | None:intergenic | 40.0% | |
TTTCCATTTGTAGCGACTGT+TGG | + | chr7_3:63322569-63322588 | None:intergenic | 40.0% | |
ACAGTCGCTACAAATGGAAA+TGG | - | chr7_3:63322569-63322588 | Msa1115790:intron | 40.0% | |
TTGATATCTGGCATTTGTGG+TGG | + | chr7_3:63322621-63322640 | None:intergenic | 40.0% | |
GATTTAGGAATTCATGGCCT+TGG | - | chr7_3:63323068-63323087 | Msa1115790:five_prime_UTR | 40.0% | |
! | GTAGTGAGAGTGTGTTTAGG+GGG | + | chr7_3:63317438-63317457 | None:intergenic | 45.0% |
AACCACAAGAAACACGGGTA+GGG | + | chr7_3:63317587-63317606 | None:intergenic | 45.0% | |
TAACCACAAGAAACACGGGT+AGG | + | chr7_3:63317588-63317607 | None:intergenic | 45.0% | |
GACAAGACAGAAGAGAGAAG+AGG | + | chr7_3:63317748-63317767 | None:intergenic | 45.0% | |
TCTGTGTGTGTGTGTGTGTT+AGG | + | chr7_3:63317818-63317837 | None:intergenic | 45.0% | |
! | TGCTTACTACACTTGCTAGC+TGG | + | chr7_3:63318302-63318321 | None:intergenic | 45.0% |
!! | AATGAGTGGTATGGCTCTGA+CGG | - | chr7_3:63318467-63318486 | Msa1115790:intron | 45.0% |
GTTTACGAGACAGACACATG+TGG | - | chr7_3:63318498-63318517 | Msa1115790:intron | 45.0% | |
GGGCCACCAGATTAAATTTC+AGG | + | chr7_3:63318803-63318822 | None:intergenic | 45.0% | |
CATCTTGACAAATGCCTCCT+CGG | + | chr7_3:63319449-63319468 | None:intergenic | 45.0% | |
ATACGACACCGATACAACCA+AGG | - | chr7_3:63319540-63319559 | Msa1115790:CDS | 45.0% | |
TCTAATGGCGCTCAAAGTGT+AGG | - | chr7_3:63319907-63319926 | Msa1115790:CDS | 45.0% | |
TGAAGAAAACGGTGAAGGTG+AGG | - | chr7_3:63319963-63319982 | Msa1115790:CDS | 45.0% | |
!! | CGCATCTTGACTTGTGATTC+AGG | - | chr7_3:63320340-63320359 | Msa1115790:CDS | 45.0% |
!! | CATAATGGGACTGACTTGAC+CGG | + | chr7_3:63320430-63320449 | None:intergenic | 45.0% |
GTCAAGTCAGTCCCATTATG+AGG | - | chr7_3:63320430-63320449 | Msa1115790:CDS | 45.0% | |
AGTCAGTCCCATTATGAGGT+TGG | - | chr7_3:63320434-63320453 | Msa1115790:CDS | 45.0% | |
AGACTTCCCATCATTCCTCT+TGG | + | chr7_3:63320478-63320497 | None:intergenic | 45.0% | |
GGAAGTCTGCATCACTGAAA+TGG | - | chr7_3:63320490-63320509 | Msa1115790:CDS | 45.0% | |
TTATGCAGACCGGTGAAGAT+TGG | - | chr7_3:63320547-63320566 | Msa1115790:CDS | 45.0% | |
! | CTTTTCTCGGCTAGTAGAGT+CGG | - | chr7_3:63320620-63320639 | Msa1115790:CDS | 45.0% |
CCAACCGAAGATTGCATGTA+AGG | + | chr7_3:63320847-63320866 | None:intergenic | 45.0% | |
CCTTACATGCAATCTTCGGT+TGG | - | chr7_3:63320844-63320863 | Msa1115790:CDS | 45.0% | |
TGATTGTGATCACCTAGAGC+AGG | + | chr7_3:63320910-63320929 | None:intergenic | 45.0% | |
! | GCTCTAGGTGATCACAATCA+AGG | - | chr7_3:63320910-63320929 | Msa1115790:CDS | 45.0% |
AGCGTTTCTCCAGAGATTGA+TGG | + | chr7_3:63320944-63320963 | None:intergenic | 45.0% | |
AATTCTTCGGGAATCAGCCT+TGG | - | chr7_3:63321195-63321214 | Msa1115790:intron | 45.0% | |
CTTAAGTTTCCTGCGGGAAT+CGG | + | chr7_3:63321271-63321290 | None:intergenic | 45.0% | |
CCAAAGCTTAAGTTTCCTGC+GGG | + | chr7_3:63321277-63321296 | None:intergenic | 45.0% | |
ATGTGGCTCTTGCAGTATCA+AGG | - | chr7_3:63321557-63321576 | Msa1115790:intron | 45.0% | |
GGAAGAGTTACTTGAACTGC+AGG | - | chr7_3:63321624-63321643 | Msa1115790:intron | 45.0% | |
GAGTTACTTGAACTGCAGGT+TGG | - | chr7_3:63321628-63321647 | Msa1115790:intron | 45.0% | |
! | TTGAACTGCAGGTTGGCAAT+TGG | - | chr7_3:63321635-63321654 | Msa1115790:intron | 45.0% |
AGAACAGTGAGAACGACGAA+AGG | - | chr7_3:63321719-63321738 | Msa1115790:intron | 45.0% | |
GAAGGTCACTCAAGTCGTTA+AGG | + | chr7_3:63321780-63321799 | None:intergenic | 45.0% | |
GCTCCCAAAAGACATGCTTA+TGG | - | chr7_3:63321804-63321823 | Msa1115790:intron | 45.0% | |
GGTTCTCTGTAACTTCACTC+CGG | - | chr7_3:63321972-63321991 | Msa1115790:intron | 45.0% | |
GTCCGAGTTTGCATTAGCAA+AGG | - | chr7_3:63322156-63322175 | Msa1115790:intron | 45.0% | |
TAGAAGCTTCCCTTATAGCG+CGG | - | chr7_3:63322361-63322380 | Msa1115790:intron | 45.0% | |
TCACCTGACGAGGAATGTAT+CGG | - | chr7_3:63322454-63322473 | Msa1115790:intron | 45.0% | |
TCTCCAACAGTCGCTACAAA+TGG | - | chr7_3:63322563-63322582 | Msa1115790:intron | 45.0% | |
GCATCAGAATACGACATTGG+AGG | - | chr7_3:63322996-63323015 | Msa1115790:five_prime_UTR | 45.0% | |
!! | GATATTTAAAAAAAAATAAT+TGG | - | chr7_3:63320680-63320699 | Msa1115790:CDS | 5.0% |
!! | TATTTAAAAAAAAATAATTG+GGG | - | chr7_3:63320682-63320701 | Msa1115790:CDS | 5.0% |
TACCCTACCCGTGTTTCTTG+TGG | - | chr7_3:63317582-63317601 | Msa1115790:three_prime_UTR | 50.0% | |
! | CAGACTTTAGGAGCTTGCCA+AGG | - | chr7_3:63319152-63319171 | Msa1115790:intron | 50.0% |
GAAAACGGTGAAGGTGAGGA+TGG | - | chr7_3:63319967-63319986 | Msa1115790:CDS | 50.0% | |
!! | GTAAGCATTGGACCCCGAAA+AGG | - | chr7_3:63320169-63320188 | Msa1115790:CDS | 50.0% |
AGTCCCATTATGAGGTTGGC+TGG | - | chr7_3:63320438-63320457 | Msa1115790:CDS | 50.0% | |
! | GTCCCATTATGAGGTTGGCT+GGG | - | chr7_3:63320439-63320458 | Msa1115790:CDS | 50.0% |
GACCCAGCCAACCTCATAAT+GGG | + | chr7_3:63320444-63320463 | None:intergenic | 50.0% | |
TGACCCAGCCAACCTCATAA+TGG | + | chr7_3:63320445-63320464 | None:intergenic | 50.0% | |
! | ATGAGGTTGGCTGGGTCAAA+TGG | - | chr7_3:63320447-63320466 | Msa1115790:CDS | 50.0% |
! | TGAGGTTGGCTGGGTCAAAT+GGG | - | chr7_3:63320448-63320467 | Msa1115790:CDS | 50.0% |
GGTCTGCCAAGAGGAATGAT+GGG | - | chr7_3:63320469-63320488 | Msa1115790:CDS | 50.0% | |
GGTCTCTTGCCAATCTTCAC+CGG | + | chr7_3:63320559-63320578 | None:intergenic | 50.0% | |
GGTGAAGATTGGCAAGAGAC+CGG | - | chr7_3:63320558-63320577 | Msa1115790:CDS | 50.0% | |
AAATCTGTTGGGAGGCTGCT+AGG | - | chr7_3:63320883-63320902 | Msa1115790:CDS | 50.0% | |
TTTGCCTGCGATGGCAAGAA+TGG | - | chr7_3:63321023-63321042 | Msa1115790:CDS | 50.0% | |
CATACCATTCTTGCCATCGC+AGG | + | chr7_3:63321030-63321049 | None:intergenic | 50.0% | |
CTATGCACTGTTCCATGACC+TGG | + | chr7_3:63321147-63321166 | None:intergenic | 50.0% | |
TGGATCAGTTGGGATCTCCA+AGG | + | chr7_3:63321215-63321234 | None:intergenic | 50.0% | |
CCCGCAGGAAACTTAAGCTT+TGG | - | chr7_3:63321274-63321293 | Msa1115790:intron | 50.0% | |
TCGTCGTTCTCACTGTTCTC+TGG | + | chr7_3:63321718-63321737 | None:intergenic | 50.0% | |
GGATAGAAAAGTCAGCCAGG+AGG | - | chr7_3:63321825-63321844 | Msa1115790:intron | 50.0% | |
CAAGCATACCTCTCCGTTCA+AGG | + | chr7_3:63322040-63322059 | None:intergenic | 50.0% | |
TGTGGAGCGAAGAATGTCAG+CGG | - | chr7_3:63322331-63322350 | Msa1115790:intron | 50.0% | |
CAACTGAAGCCGCGCTATAA+GGG | + | chr7_3:63322373-63322392 | None:intergenic | 50.0% | |
ACAACTGAAGCCGCGCTATA+AGG | + | chr7_3:63322374-63322393 | None:intergenic | 50.0% | |
! | TCTGCTACATTGGCTGACGA+GGG | + | chr7_3:63322407-63322426 | None:intergenic | 50.0% |
!! | GGAATGTATCGGCTGTTCAG+CGG | - | chr7_3:63322465-63322484 | Msa1115790:intron | 50.0% |
GTAGCGACTGTTGGAGATGA+AGG | + | chr7_3:63322560-63322579 | None:intergenic | 50.0% | |
GGATGATGTCAACAGGTCCG+AGG | - | chr7_3:63319429-63319448 | Msa1115790:intron | 55.0% | |
TGATGTCAACAGGTCCGAGG+AGG | - | chr7_3:63319432-63319451 | Msa1115790:intron | 55.0% | |
GAGAGAAGTTGCTGCTCTCG+AGG | - | chr7_3:63320053-63320072 | Msa1115790:CDS | 55.0% | |
TGTGCTGAGCTACCATGCTC+TGG | + | chr7_3:63320099-63320118 | None:intergenic | 55.0% | |
GCATGGTAGCTCAGCACACA+AGG | - | chr7_3:63320101-63320120 | Msa1115790:CDS | 55.0% | |
ACAAGGTTCACACACCTGCG+CGG | - | chr7_3:63320118-63320137 | Msa1115790:CDS | 55.0% | |
GGTCAAATGGGTCTGCCAAG+AGG | - | chr7_3:63320460-63320479 | Msa1115790:CDS | 55.0% | |
GGGTCTGCCAAGAGGAATGA+TGG | - | chr7_3:63320468-63320487 | Msa1115790:CDS | 55.0% | |
AGACTCTGTCCTCTTCGAGC+AGG | - | chr7_3:63320982-63321001 | Msa1115790:CDS | 55.0% | |
TCTGTCCTCTTCGAGCAGGA+GGG | - | chr7_3:63320986-63321005 | Msa1115790:CDS | 55.0% | |
GTGTGGTTGTTTGCCTGCGA+TGG | - | chr7_3:63321014-63321033 | Msa1115790:CDS | 55.0% | |
!!! | AAGGTTTTGCCGATTCCCGC+AGG | - | chr7_3:63321259-63321278 | Msa1115790:intron | 55.0% |
AGTGAGAACGACGAAAGGCG+AGG | - | chr7_3:63321724-63321743 | Msa1115790:intron | 55.0% | |
GCGTCAGGACAGAACTCATC+CGG | + | chr7_3:63321994-63322013 | None:intergenic | 55.0% | |
GGATGAGTTCTGTCCTGACG+CGG | - | chr7_3:63321993-63322012 | Msa1115790:intron | 55.0% | |
GCTGTCTTGGAGGCCTTGAA+CGG | - | chr7_3:63322024-63322043 | Msa1115790:intron | 55.0% | |
! | CTCTGCTACATTGGCTGACG+AGG | + | chr7_3:63322408-63322427 | None:intergenic | 55.0% |
!! | GAGGAAAGTGTCACCTGACG+AGG | - | chr7_3:63322444-63322463 | Msa1115790:intron | 55.0% |
CAGCCGATACATTCCTCGTC+AGG | + | chr7_3:63322460-63322479 | None:intergenic | 55.0% | |
CGGTGAAGGTGAGGATGGTG+CGG | - | chr7_3:63319972-63319991 | Msa1115790:CDS | 60.0% | |
AGGTGAGGATGGTGCGGCTT+TGG | - | chr7_3:63319978-63319997 | Msa1115790:CDS | 60.0% | |
CTCGGCTAGTAGAGTCGGTG+TGG | - | chr7_3:63320625-63320644 | Msa1115790:CDS | 60.0% | |
GGCTAGTAGAGTCGGTGTGG+TGG | - | chr7_3:63320628-63320647 | Msa1115790:CDS | 60.0% | |
AGTAGAGTCGGTGTGGTGGC+AGG | - | chr7_3:63320632-63320651 | Msa1115790:CDS | 60.0% | |
AGGCTGCTAGGACCTGCTCT+AGG | - | chr7_3:63320895-63320914 | Msa1115790:CDS | 60.0% | |
CTCTGTCCTCTTCGAGCAGG+AGG | - | chr7_3:63320985-63321004 | Msa1115790:CDS | 60.0% | |
GAGAACGACGAAAGGCGAGG+TGG | - | chr7_3:63321727-63321746 | Msa1115790:intron | 60.0% | |
TTCTGTCCTGACGCGGTTCC+AGG | - | chr7_3:63322000-63322019 | Msa1115790:intron | 60.0% | |
GGTTCCAGGAGCTGTCTTGG+AGG | - | chr7_3:63322014-63322033 | Msa1115790:intron | 60.0% | |
AAGGCCTCCAAGACAGCTCC+TGG | + | chr7_3:63322021-63322040 | None:intergenic | 60.0% | |
CTTGGAGGCCTTGAACGGAG+AGG | - | chr7_3:63322029-63322048 | Msa1115790:intron | 60.0% | |
! | GCTACATTGGCTGACGAGGG+AGG | + | chr7_3:63322404-63322423 | None:intergenic | 60.0% |
!! | GTATCGGCTGTTCAGCGGAG+AGG | - | chr7_3:63322470-63322489 | Msa1115790:intron | 60.0% |
TCGTGCCCTCCTGCTCGAAG+AGG | + | chr7_3:63320994-63321013 | None:intergenic | 65.0% | |
ACAGCTCCTGGAACCGCGTC+AGG | + | chr7_3:63322009-63322028 | None:intergenic | 65.0% | |
CGCGGTTCCAGGAGCTGTCT+TGG | - | chr7_3:63322011-63322030 | Msa1115790:intron | 65.0% | |
CACCTGCGCGGCGCCTTTCT+AGG | - | chr7_3:63320130-63320149 | Msa1115790:CDS | 70.0% | |
!! | AGCCTAGAAAGGCGCCGCGC+AGG | + | chr7_3:63320135-63320154 | None:intergenic | 70.0% |
! | CGAGCAGGAGGGCACGAGTG+TGG | - | chr7_3:63320997-63321016 | Msa1115790:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 63317429 | 63323124 | 63317429 | ID=Msa1115790;Name=Msa1115790 |
chr7_3 | mRNA | 63317429 | 63323124 | 63317429 | ID=Msa1115790-mRNA-1;Parent=Msa1115790;Name=Msa1115790-mRNA-1;_AED=0.17;_eAED=0.17;_QI=519|1|1|1|0.75|0.66|9|457|710 |
chr7_3 | exon | 63317429 | 63318227 | 63317429 | ID=Msa1115790-mRNA-1:exon:14864;Parent=Msa1115790-mRNA-1 |
chr7_3 | exon | 63318503 | 63318616 | 63318503 | ID=Msa1115790-mRNA-1:exon:14863;Parent=Msa1115790-mRNA-1 |
chr7_3 | exon | 63318707 | 63318907 | 63318707 | ID=Msa1115790-mRNA-1:exon:14862;Parent=Msa1115790-mRNA-1 |
chr7_3 | exon | 63319232 | 63319405 | 63319232 | ID=Msa1115790-mRNA-1:exon:14861;Parent=Msa1115790-mRNA-1 |
chr7_3 | exon | 63319509 | 63319718 | 63319509 | ID=Msa1115790-mRNA-1:exon:14860;Parent=Msa1115790-mRNA-1 |
chr7_3 | exon | 63319900 | 63320191 | 63319900 | ID=Msa1115790-mRNA-1:exon:14859;Parent=Msa1115790-mRNA-1 |
chr7_3 | exon | 63320288 | 63321109 | 63320288 | ID=Msa1115790-mRNA-1:exon:14858;Parent=Msa1115790-mRNA-1 |
chr7_3 | exon | 63321380 | 63321502 | 63321380 | ID=Msa1115790-mRNA-1:exon:14857;Parent=Msa1115790-mRNA-1 |
chr7_3 | exon | 63322751 | 63323124 | 63322751 | ID=Msa1115790-mRNA-1:exon:14856;Parent=Msa1115790-mRNA-1 |
chr7_3 | five_prime_UTR | 63322751 | 63323124 | 63322751 | ID=Msa1115790-mRNA-1:five_prime_utr;Parent=Msa1115790-mRNA-1 |
chr7_3 | five_prime_UTR | 63321380 | 63321502 | 63321380 | ID=Msa1115790-mRNA-1:five_prime_utr;Parent=Msa1115790-mRNA-1 |
chr7_3 | five_prime_UTR | 63321088 | 63321109 | 63321088 | ID=Msa1115790-mRNA-1:five_prime_utr;Parent=Msa1115790-mRNA-1 |
chr7_3 | CDS | 63320288 | 63321087 | 63320288 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
chr7_3 | CDS | 63319900 | 63320191 | 63319900 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
chr7_3 | CDS | 63319509 | 63319718 | 63319509 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
chr7_3 | CDS | 63319232 | 63319405 | 63319232 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
chr7_3 | CDS | 63318707 | 63318907 | 63318707 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
chr7_3 | CDS | 63318503 | 63318616 | 63318503 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
chr7_3 | CDS | 63317886 | 63318227 | 63317886 | ID=Msa1115790-mRNA-1:cds;Parent=Msa1115790-mRNA-1 |
chr7_3 | three_prime_UTR | 63317429 | 63317885 | 63317429 | ID=Msa1115790-mRNA-1:three_prime_utr;Parent=Msa1115790-mRNA-1 |
Gene Sequence |
Protein sequence |