Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034900 | XP_003625192.1 | 98.169 | 710 | 13 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034900 | A2Q3E1 | 98.169 | 710 | 13 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1440 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0185880 | Msa1034900 | 0.814603 | 1.416483e-51 | -8.615850e-47 |
| Msa1034900 | Msa1074940 | 0.981466 | 1.172541e-152 | -8.615850e-47 |
| Msa1034900 | Msa1115790 | 0.837805 | 4.185786e-57 | -8.615850e-47 |
| Msa1034900 | Msa1162300 | 0.927067 | 1.967164e-91 | -8.615850e-47 |
| Msa0482840 | Msa1034900 | 0.802392 | 5.732596e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034900 | MtrunA17_Chr7g0258101 | 98.169 | 710 | 13 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1440 |
| Msa1034900 | MtrunA17_Chr7g0225961 | 51.636 | 550 | 230 | 12 | 177 | 708 | 447 | 978 | 2.12e-176 | 530 |
| Msa1034900 | MtrunA17_Chr6g0459211 | 49.129 | 574 | 251 | 10 | 153 | 708 | 345 | 895 | 7.52e-169 | 508 |
| Msa1034900 | MtrunA17_Chr1g0187521 | 42.611 | 697 | 331 | 17 | 22 | 708 | 353 | 990 | 1.33e-161 | 491 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034900 | AT2G42320.2 | 62.324 | 568 | 175 | 9 | 142 | 708 | 139 | 668 | 0.0 | 731 |
| Msa1034900 | AT2G42320.1 | 62.324 | 568 | 175 | 9 | 142 | 708 | 139 | 668 | 0.0 | 731 |
| Msa1034900 | AT3G57780.4 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 681 |
| Msa1034900 | AT3G57780.1 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 681 |
| Msa1034900 | AT3G57780.2 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 681 |
| Msa1034900 | AT3G57780.3 | 59.083 | 589 | 207 | 9 | 123 | 710 | 116 | 671 | 0.0 | 681 |
| Msa1034900 | AT3G57780.5 | 58.072 | 446 | 161 | 6 | 123 | 568 | 116 | 535 | 4.50e-175 | 511 |
| Msa1034900 | AT5G06930.2 | 44.109 | 696 | 308 | 12 | 17 | 706 | 102 | 722 | 4.14e-170 | 505 |
| Msa1034900 | AT5G06930.3 | 44.109 | 696 | 308 | 12 | 17 | 706 | 102 | 722 | 4.14e-170 | 505 |
| Msa1034900 | AT5G06930.1 | 44.109 | 696 | 308 | 12 | 17 | 706 | 102 | 722 | 4.14e-170 | 505 |
| Msa1034900 | AT3G01810.1 | 50.640 | 547 | 222 | 11 | 178 | 708 | 403 | 917 | 1.72e-168 | 508 |
| Msa1034900 | AT3G01810.3 | 50.640 | 547 | 222 | 11 | 178 | 708 | 403 | 917 | 1.72e-168 | 508 |
| Msa1034900 | AT3G01810.2 | 50.640 | 547 | 222 | 11 | 178 | 708 | 403 | 917 | 1.72e-168 | 508 |
| Msa1034900 | AT2G42320.4 | 64.489 | 352 | 111 | 3 | 142 | 493 | 139 | 476 | 4.68e-166 | 486 |
| Msa1034900 | AT2G42320.3 | 64.489 | 352 | 111 | 3 | 142 | 493 | 139 | 476 | 4.68e-166 | 486 |
| Msa1034900 | AT5G43230.1 | 46.154 | 533 | 230 | 12 | 182 | 708 | 361 | 842 | 3.21e-147 | 450 |
Find 217 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGATTCAGGTTAACTTTC+TGG | 0.107816 | 7_1:-70608435 | Msa1034900:intron |
| AAAATGAATGTCAGGAATTT+AGG | 0.196472 | 7_1:-70606072 | Msa1034900:three_prime_UTR |
| TACTGTTTCTGGCCTTATTT+TGG | 0.209652 | 7_1:-70608575 | Msa1034900:CDS |
| GTGAGAGAGTGTTTAGTTTA+GGG | 0.212664 | 7_1:+70611353 | None:intergenic |
| TCAGTCTTTCATTGATTATA+CGG | 0.219799 | 7_1:-70606837 | Msa1034900:CDS |
| AATAAACAGACAAGATATTT+TGG | 0.219821 | 7_1:-70606018 | Msa1034900:three_prime_UTR |
| ATTGCCAAGAATACTGTTTC+TGG | 0.221335 | 7_1:-70608586 | Msa1034900:CDS |
| AGTGAGAGAGTGTTTAGTTT+AGG | 0.222489 | 7_1:+70611352 | None:intergenic |
| TTCTGTCCTGACGCGGTTCC+AGG | 0.227836 | 7_1:-70606787 | Msa1034900:CDS |
| CACCTGCGCGGCGCCTTTCT+AGG | 0.229152 | 7_1:-70608657 | Msa1034900:CDS |
| TCTGAGAAGTTACGTACTTT+AGG | 0.262914 | 7_1:-70609647 | Msa1034900:five_prime_UTR |
| CCATTTCCTGATTTACCATT+TGG | 0.275012 | 7_1:+70608265 | None:intergenic |
| ACAACTGGAGCCGCGCTATA+AGG | 0.276595 | 7_1:+70606417 | None:intergenic |
| TTATTAAGGATGATGGATTT+AGG | 0.287768 | 7_1:-70605735 | Msa1034900:three_prime_UTR |
| TGATAATCACTCCACTGATT+TGG | 0.300525 | 7_1:-70609301 | Msa1034900:CDS |
| GAGATAATTTCACAAGCATT+TGG | 0.301700 | 7_1:-70608388 | Msa1034900:CDS |
| CCATGATTCGACTCTTTCTA+AGG | 0.303020 | 7_1:+70608192 | None:intergenic |
| TCATCGATATATGCTTATTA+AGG | 0.303343 | 7_1:-70605749 | Msa1034900:three_prime_UTR |
| TTCATTACTAGGGAAAATTA+AGG | 0.307623 | 7_1:-70605990 | Msa1034900:three_prime_UTR |
| ATGATTTAGCAACCAAAATA+AGG | 0.316584 | 7_1:+70608563 | None:intergenic |
| CCAACCGAAGATTGCATATA+AGG | 0.317885 | 7_1:+70607943 | None:intergenic |
| CATCTTGACAAGTGCCTCCT+TGG | 0.319978 | 7_1:+70609341 | None:intergenic |
| GGTTAAGGAAATTGAAATCT+TGG | 0.322169 | 7_1:-70608911 | Msa1034900:CDS |
| ATCAACTACTTCGTGAAGTT+TGG | 0.328969 | 7_1:-70606152 | Msa1034900:CDS |
| ATTCTTTAATGCTACTCTTA+AGG | 0.333131 | 7_1:+70605926 | None:intergenic |
| CCCGCAGGAAACTTAAGCTT+TGG | 0.334169 | 7_1:-70607513 | Msa1034900:CDS |
| CCCACACTCATTTATCATTA+CGG | 0.334476 | 7_1:-70611146 | Msa1034900:five_prime_UTR |
| TCACAAGCATTTGGGAATTC+CGG | 0.335945 | 7_1:-70608379 | Msa1034900:CDS |
| ATTTCCTTAACCTCTATAAC+AGG | 0.338096 | 7_1:+70608922 | None:intergenic |
| CCCAACAGATTTATTTGAAC+AGG | 0.344331 | 7_1:+70607915 | None:intergenic |
| TCCACAATTGGATCTGATAT+TGG | 0.346515 | 7_1:+70607555 | None:intergenic |
| CGCGGTTCCAGGAGCTGTCT+TGG | 0.351188 | 7_1:-70606776 | Msa1034900:CDS |
| AAGGCCAGAAACAGTATTCT+TGG | 0.354379 | 7_1:+70608582 | None:intergenic |
| CGATGTTCAATGCAATTCTT+CGG | 0.364445 | 7_1:-70607605 | Msa1034900:CDS |
| GCTCCCAAAAGACATGCTTA+TGG | 0.367269 | 7_1:-70606983 | Msa1034900:CDS |
| CTATCCATAAGCATGTCTTT+TGG | 0.368140 | 7_1:+70606979 | None:intergenic |
| GGTATCCCAAATGGTAAATC+AGG | 0.370404 | 7_1:-70608271 | Msa1034900:CDS |
| GAAACGAAACGAAACGAAAC+AGG | 0.374864 | 7_1:+70611012 | None:intergenic |
| AAAACCTGTTATAGAGGTTA+AGG | 0.378511 | 7_1:-70608926 | Msa1034900:CDS |
| TGACCCAGCCAACCTCATAA+TGG | 0.379222 | 7_1:+70608345 | None:intergenic |
| ATGAGGTTGGCTGGGTCAAA+TGG | 0.379911 | 7_1:-70608340 | Msa1034900:CDS |
| CATTTCCTGATTTACCATTT+GGG | 0.383540 | 7_1:+70608266 | None:intergenic |
| TTCACGAAGTAGTTGATATC+TGG | 0.384114 | 7_1:+70606158 | None:intergenic |
| GATGTTCAATGCAATTCTTC+GGG | 0.387788 | 7_1:-70607604 | Msa1034900:CDS |
| AGTCCCATTATGAGGTTGGC+TGG | 0.390091 | 7_1:-70608349 | Msa1034900:CDS |
| ATGATGGATTTAGGAATTCA+TGG | 0.392575 | 7_1:-70605726 | Msa1034900:three_prime_UTR |
| TAAAAGTGCATACACAATCT+TGG | 0.392703 | 7_1:+70609694 | None:intergenic |
| AGATAATTTCACAAGCATTT+GGG | 0.392815 | 7_1:-70608387 | Msa1034900:CDS |
| GACTCCTTATATGCAATCTT+CGG | 0.394851 | 7_1:-70607947 | Msa1034900:CDS |
| TAAGGCAAACGTAAAGGTTC+CGG | 0.395508 | 7_1:+70608210 | None:intergenic |
| TCGTCGTTCTCACTGTTCTC+TGG | 0.395693 | 7_1:+70607072 | None:intergenic |
| CAAGCATACCTCTCCGTTCA+AGG | 0.396892 | 7_1:+70606750 | None:intergenic |
| CTTATATGCAATCTTCGGTT+GGG | 0.397784 | 7_1:-70607942 | Msa1034900:CDS |
| AGTTCCTGCAAAAGTTTCTT+CGG | 0.400597 | 7_1:-70608971 | Msa1034900:CDS |
| GCTTTCATCTATCATTGATA+AGG | 0.400694 | 7_1:-70606256 | Msa1034900:CDS |
| CTCTGCCACATTGGCTGACG+AGG | 0.405100 | 7_1:+70606383 | None:intergenic |
| CAACTGGAGCCGCGCTATAA+GGG | 0.408164 | 7_1:+70606418 | None:intergenic |
| GGAAGTCTGCATCACTGAAA+TGG | 0.412726 | 7_1:-70608297 | Msa1034900:CDS |
| TATATGCTTATTAAGGATGA+TGG | 0.415256 | 7_1:-70605742 | Msa1034900:three_prime_UTR |
| GACCCAGCCAACCTCATAAT+GGG | 0.418748 | 7_1:+70608346 | None:intergenic |
| AAACTGCAATCAAAGGTAAC+AGG | 0.421068 | 7_1:-70609081 | Msa1034900:CDS |
| GATTTAGGAATTCATGGCCT+TGG | 0.422108 | 7_1:-70605720 | Msa1034900:three_prime_UTR |
| CCAAATGGTAAATCAGGAAA+TGG | 0.422555 | 7_1:-70608265 | Msa1034900:CDS |
| AACTTTCACTGGCTTAGTAT+TGG | 0.428733 | 7_1:+70608990 | None:intergenic |
| CTTAAGTTTCCTGCGGGAAT+CGG | 0.429998 | 7_1:+70607519 | None:intergenic |
| TTGAACTGCAGGTTGGCAAT+TGG | 0.431617 | 7_1:-70607152 | Msa1034900:intron |
| AACTTCTCAGAATTGTGCTT+CGG | 0.431945 | 7_1:+70609659 | None:intergenic |
| AGAGTCTTTGAAAAGCATCT+TGG | 0.438876 | 7_1:+70607821 | None:intergenic |
| TTATGCAGACCGGTGAAGAT+TGG | 0.439100 | 7_1:-70608240 | Msa1034900:CDS |
| ATCTTGGATGGATCTTCTAA+TGG | 0.439235 | 7_1:-70608895 | Msa1034900:CDS |
| AAATTGTACGTTAAAATGAT+AGG | 0.439544 | 7_1:+70611236 | None:intergenic |
| CCTTAGAAAGAGTCGAATCA+TGG | 0.440461 | 7_1:-70608192 | Msa1034900:CDS |
| AAAACCTTTGAATCCACAAT+TGG | 0.442116 | 7_1:+70607543 | None:intergenic |
| GGATCTGATATTGGATCAGT+TGG | 0.442351 | 7_1:+70607564 | None:intergenic |
| AGATTGCTCACTGATATGTT+TGG | 0.443061 | 7_1:-70607126 | Msa1034900:CDS |
| TCCTGTTCAAATAAATCTGT+TGG | 0.444730 | 7_1:-70607916 | Msa1034900:CDS |
| AAGGCCTCCAAGACAGCTCC+TGG | 0.449202 | 7_1:+70606769 | None:intergenic |
| CATTGATGCTGAAGATTGTT+CGG | 0.456507 | 7_1:-70607103 | Msa1034900:CDS |
| AGCGTTTCTCCAGAGATTGA+TGG | 0.459672 | 7_1:+70607846 | None:intergenic |
| ACAGCTCCTGGAACCGCGTC+AGG | 0.460610 | 7_1:+70606781 | None:intergenic |
| GTAGCGACTGTTGGAGATGA+AGG | 0.463021 | 7_1:+70606231 | None:intergenic |
| AAATCTATAAACTCAAATAA+AGG | 0.465368 | 7_1:-70609045 | Msa1034900:CDS |
| AAAAGTGCATACACAATCTT+GGG | 0.467370 | 7_1:+70609695 | None:intergenic |
| CAGTCTTTCATTGATTATAC+GGG | 0.471953 | 7_1:-70606836 | Msa1034900:CDS |
| TCTCCAACAGTCGCTACAAA+TGG | 0.474955 | 7_1:-70606225 | Msa1034900:CDS |
| GAAGGTCACTCAAGTCGTTA+AGG | 0.475334 | 7_1:+70607010 | None:intergenic |
| CAGCCGATACATTCCTTGTC+AGG | 0.475846 | 7_1:+70606331 | None:intergenic |
| GGTCTCTTGCCAATCTTCAC+CGG | 0.476305 | 7_1:+70608231 | None:intergenic |
| GCTATAAGGGAAGCTTCTAA+TGG | 0.478309 | 7_1:+70606431 | None:intergenic |
| TTTGGAATTCTTCATTACTA+GGG | 0.478393 | 7_1:-70606000 | Msa1034900:three_prime_UTR |
| GGGTCTGCCAAGAGGAATGA+TGG | 0.478703 | 7_1:-70608319 | Msa1034900:CDS |
| CCTGTTCAAATAAATCTGTT+GGG | 0.479247 | 7_1:-70607915 | Msa1034900:CDS |
| ATTTCATCCTTAGACTATTG+TGG | 0.482559 | 7_1:-70606475 | Msa1034900:intron |
| TTTCCATTTGTAGCGACTGT+TGG | 0.485899 | 7_1:+70606222 | None:intergenic |
| AGCCTAGAAAGGCGCCGCGC+AGG | 0.486438 | 7_1:+70608655 | None:intergenic |
| ACAGTCGCTACAAATGGAAA+TGG | 0.487763 | 7_1:-70606219 | Msa1034900:CDS |
| CCTTATATGCAATCTTCGGT+TGG | 0.490349 | 7_1:-70607943 | Msa1034900:CDS |
| GCAGAGAAAGTTGCAGAGGC+AGG | 0.490544 | 7_1:-70606366 | Msa1034900:CDS |
| TAGAAAGCAATCGTGGATCA+AGG | 0.491210 | 7_1:-70609128 | Msa1034900:CDS |
| AGGTGAGGATGGTGCGGCTA+TGG | 0.492044 | 7_1:-70608809 | Msa1034900:CDS |
| ATATACATGCTTGTAAGCAT+TGG | 0.492208 | 7_1:-70608630 | Msa1034900:CDS |
| GGTTCCAGGAGCTGTCTTGG+AGG | 0.494180 | 7_1:-70606773 | Msa1034900:CDS |
| AAGGAAATTGAAATCTTGGA+TGG | 0.494656 | 7_1:-70608907 | Msa1034900:CDS |
| AAATCTGTTGGGAGGCTGCT+AGG | 0.495687 | 7_1:-70607904 | Msa1034900:CDS |
| GAGGGAGGCATATACACAAC+TGG | 0.497820 | 7_1:+70606402 | None:intergenic |
| CTTGCCTGTGATGGCAAGAA+TGG | 0.499265 | 7_1:-70607764 | Msa1034900:intron |
| CTCTGTCCTCTTCGAGCAGG+AGG | 0.499854 | 7_1:-70607802 | Msa1034900:CDS |
| TACCCTGCCCGTGTTTCTTG+TGG | 0.500922 | 7_1:-70611199 | Msa1034900:five_prime_UTR |
| AGATCCAATTGTGGATTCAA+AGG | 0.501615 | 7_1:-70607547 | Msa1034900:CDS |
| AAATGGAAAGGTATCCCAAA+TGG | 0.503103 | 7_1:-70608280 | Msa1034900:CDS |
| TTGAGATGATAATGAATCCT+TGG | 0.504553 | 7_1:+70609230 | None:intergenic |
| AGTAGAGTCGGTGTGGTGGC+AGG | 0.505247 | 7_1:-70608155 | Msa1034900:intron |
| TGAGAGAGTGTTTAGTTTAG+GGG | 0.505815 | 7_1:+70611354 | None:intergenic |
| CATGCGGTAATGATGTTTCA+AGG | 0.509862 | 7_1:-70608543 | Msa1034900:intron |
| GTAAGCATTGGACCCCGAAA+AGG | 0.511380 | 7_1:-70608618 | Msa1034900:CDS |
| TTGCTCTTTCTCCAAATCAG+TGG | 0.511690 | 7_1:+70609290 | None:intergenic |
| GGAAACTTAAGCTTTGGATC+TGG | 0.513114 | 7_1:-70607507 | Msa1034900:CDS |
| TGTGCTGAGCTACCATGCTC+TGG | 0.514422 | 7_1:+70608691 | None:intergenic |
| GAGAGAGTGTTTAGTTTAGG+GGG | 0.516448 | 7_1:+70611355 | None:intergenic |
| TTATATGCAATCTTCGGTTG+GGG | 0.517244 | 7_1:-70607941 | Msa1034900:CDS |
| AGACTTCCCATCATTCCTCT+TGG | 0.520311 | 7_1:+70608312 | None:intergenic |
| TGAGGTTGGCTGGGTCAAAT+GGG | 0.521117 | 7_1:-70608339 | Msa1034900:CDS |
| GTCCCATTATGAGGTTGGCT+GGG | 0.521850 | 7_1:-70608348 | Msa1034900:CDS |
| AACAAATAAACTGCAATCAA+AGG | 0.522793 | 7_1:-70609088 | Msa1034900:CDS |
| TTCACAAGTTTCACATCACA+TGG | 0.525118 | 7_1:+70606128 | None:intergenic |
| GTTTCTTCGGAATCTTCTGA+AGG | 0.525949 | 7_1:-70608958 | Msa1034900:CDS |
| GTCAAGTCAGTCCCATTATG+AGG | 0.532212 | 7_1:-70608357 | Msa1034900:CDS |
| TTATCAAACAAACATGAAGA+AGG | 0.532376 | 7_1:+70605884 | None:intergenic |
| TGCAACTTTCTCTGCCACAT+TGG | 0.532567 | 7_1:+70606374 | None:intergenic |
| TCTTTCTAAGGCAAACGTAA+AGG | 0.535183 | 7_1:+70608204 | None:intergenic |
| TAGTTGATATCTGGCATTTG+TGG | 0.536534 | 7_1:+70606167 | None:intergenic |
| AGGCTGCTAGGACCTGCTCT+AGG | 0.537769 | 7_1:-70607892 | Msa1034900:CDS |
| AGACTCTGTCCTCTTCGAGC+AGG | 0.539604 | 7_1:-70607805 | Msa1034900:CDS |
| GTGTGGTTGCTTGCCTGTGA+TGG | 0.539654 | 7_1:-70607773 | Msa1034900:CDS |
| CATAATGGGACTGACTTGAC+CGG | 0.541186 | 7_1:+70608360 | None:intergenic |
| TATAATCAATGAAAGACTGA+TGG | 0.542526 | 7_1:+70606840 | None:intergenic |
| CCAAAGCTTAAGTTTCCTGC+GGG | 0.543212 | 7_1:+70607513 | None:intergenic |
| CCGTAATGATAAATGAGTGT+GGG | 0.543630 | 7_1:+70611146 | None:intergenic |
| ATTGTTAATGCTGAAGAAAA+CGG | 0.544073 | 7_1:-70608835 | Msa1034900:CDS |
| TTGATATCTGGCATTTGTGG+TGG | 0.552983 | 7_1:+70606170 | None:intergenic |
| GCGTCAGGACAGAACTCATC+CGG | 0.556096 | 7_1:+70606796 | None:intergenic |
| CATACCATTCTTGCCATCAC+AGG | 0.556346 | 7_1:+70607760 | None:intergenic |
| AATTCTTCGGGAATCAGCCT+TGG | 0.558985 | 7_1:-70607592 | Msa1034900:CDS |
| GATCTGATATTGGATCAGTT+GGG | 0.559567 | 7_1:+70607565 | None:intergenic |
| GGTGAAGATTGGCAAGAGAC+CGG | 0.563020 | 7_1:-70608229 | Msa1034900:CDS |
| GCATCAGAATACGACATTGG+AGG | 0.563961 | 7_1:-70605792 | Msa1034900:three_prime_UTR |
| CATGTATATAGAGCCTAGAA+AGG | 0.566272 | 7_1:+70608644 | None:intergenic |
| GCTGTCTTGGAGGCCTTGAA+CGG | 0.568733 | 7_1:-70606763 | Msa1034900:CDS |
| TATTCTATTGTACCAGAGCA+TGG | 0.572688 | 7_1:-70608703 | Msa1034900:CDS |
| ACGAATTGAAAATCTTGAAG+AGG | 0.573568 | 7_1:-70608761 | Msa1034900:CDS |
| GAGGAAAGTGTCACCTGACA+AGG | 0.576148 | 7_1:-70606344 | Msa1034900:CDS |
| GCTCTAGGTGATCACAATCA+AGG | 0.578230 | 7_1:-70607877 | Msa1034900:CDS |
| AGTCAGTCCCATTATGAGGT+TGG | 0.581356 | 7_1:-70608353 | Msa1034900:CDS |
| ATCAATGAAAGACTGATGGA+TGG | 0.583203 | 7_1:+70606844 | None:intergenic |
| AAGGATTCATTATCATCTCA+AGG | 0.584015 | 7_1:-70609228 | Msa1034900:CDS |
| TAACCACAAGAAACACGGGC+AGG | 0.584213 | 7_1:+70611196 | None:intergenic |
| GCCACATTGGCTGACGAGGG+AGG | 0.584527 | 7_1:+70606387 | None:intergenic |
| TGATTGTGATCACCTAGAGC+AGG | 0.586194 | 7_1:+70607880 | None:intergenic |
| AGAACAGTGAGAACGACGAA+AGG | 0.586884 | 7_1:-70607068 | Msa1034900:CDS |
| AGAAAGCAATCGTGGATCAA+GGG | 0.587886 | 7_1:-70609127 | Msa1034900:CDS |
| TTTGATTAAAATATGTACCA+AGG | 0.590671 | 7_1:+70605703 | None:intergenic |
| TATGGATAGACAAGTCAGCC+AGG | 0.590801 | 7_1:-70606965 | Msa1034900:CDS |
| GGCTAGTAGAGTCGGTGTGG+TGG | 0.590826 | 7_1:-70608159 | Msa1034900:CDS |
| AATGGTAATCACAAAGAGCA+AGG | 0.592592 | 7_1:-70606201 | Msa1034900:CDS |
| TGTGGCAGAGAAAGTTGCAG+AGG | 0.593717 | 7_1:-70606370 | Msa1034900:CDS |
| CGAGCAGGAGGGCACGAGTG+TGG | 0.595415 | 7_1:-70607790 | Msa1034900:CDS |
| GGAACTAACCACAAGAAACA+CGG | 0.597003 | 7_1:+70611191 | None:intergenic |
| TCTAATGGCGCTCAAAGTGT+AGG | 0.597901 | 7_1:-70608880 | Msa1034900:CDS |
| TCACCTGACAAGGAATGTAT+CGG | 0.598938 | 7_1:-70606334 | Msa1034900:CDS |
| TACAAGCGATGAAGAACTTG+AGG | 0.599789 | 7_1:-70606292 | Msa1034900:CDS |
| TCTGCCACATTGGCTGACGA+GGG | 0.600905 | 7_1:+70606384 | None:intergenic |
| AACAGTTAAACACGTTACGT+TGG | 0.601717 | 7_1:+70611170 | None:intergenic |
| GGTCTGCCAAGAGGAATGAT+GGG | 0.603431 | 7_1:-70608318 | Msa1034900:CDS |
| TAATGAATCCTTGGTTGTAT+CGG | 0.604817 | 7_1:+70609239 | None:intergenic |
| TCTGCATCACTGAAATGGAA+AGG | 0.604858 | 7_1:-70608292 | Msa1034900:CDS |
| GAGAGAAGTTGCTGCTCTCG+AGG | 0.605091 | 7_1:-70608734 | Msa1034900:CDS |
| TCGTGCCCTCCTGCTCGAAG+AGG | 0.606373 | 7_1:+70607796 | None:intergenic |
| TCCAATATCAGATCCAATTG+TGG | 0.607623 | 7_1:-70607556 | Msa1034900:CDS |
| CGGTGAAGGTGAGGATGGTG+CGG | 0.610273 | 7_1:-70608815 | Msa1034900:CDS |
| GGATGATGTCAACAGGTCCA+AGG | 0.615946 | 7_1:-70609358 | Msa1034900:intron |
| AACCACAAGAAACACGGGCA+GGG | 0.618530 | 7_1:+70611197 | None:intergenic |
| CGTAATGATAAATGAGTGTG+GGG | 0.620380 | 7_1:+70611147 | None:intergenic |
| AATTATCTCTCTCAGAACAA+TGG | 0.623116 | 7_1:+70608402 | None:intergenic |
| CTCGGCTAGTAGAGTCGGTG+TGG | 0.624389 | 7_1:-70608162 | Msa1034900:CDS |
| TCCAAAGCTTAAGTTTCCTG+CGG | 0.624548 | 7_1:+70607512 | None:intergenic |
| GCATGGTAGCTCAGCACACA+AGG | 0.626811 | 7_1:-70608686 | Msa1034900:CDS |
| GACAAGACAGAACAGAGAAG+AGG | 0.627213 | 7_1:+70611034 | None:intergenic |
| TAAGCATCAGAATACGACAT+TGG | 0.627866 | 7_1:-70605795 | Msa1034900:three_prime_UTR |
| GAGAAAGTTGCAGAGGCAGG+AGG | 0.628672 | 7_1:-70606363 | Msa1034900:CDS |
| AATTCTTTAGAAAGCAATCG+TGG | 0.631921 | 7_1:-70609135 | Msa1034900:CDS |
| GCCTCCCTCGTCAGCCAATG+TGG | 0.632177 | 7_1:-70606388 | Msa1034900:CDS |
| TAGAAGCTTCCCTTATAGCG+CGG | 0.638046 | 7_1:-70606427 | Msa1034900:CDS |
| GAAAACGGTGAAGGTGAGGA+TGG | 0.639739 | 7_1:-70608820 | Msa1034900:CDS |
| TCTGTCCTCTTCGAGCAGGA+GGG | 0.641785 | 7_1:-70607801 | Msa1034900:CDS |
| GGAATGTATCGGCTGTTCAG+CGG | 0.642042 | 7_1:-70606323 | Msa1034900:CDS |
| CGTACTTTAGGAGCTTGCCA+AGG | 0.645481 | 7_1:-70609635 | Msa1034900:intron |
| ATGGTAATCACAAAGAGCAA+GGG | 0.648700 | 7_1:-70606200 | Msa1034900:CDS |
| GAACTAACCACAAGAAACAC+GGG | 0.650160 | 7_1:+70611192 | None:intergenic |
| GGTCAAATGGGTCTGCCAAG+AGG | 0.653307 | 7_1:-70608327 | Msa1034900:CDS |
| ACCGTAATGATAAATGAGTG+TGG | 0.658409 | 7_1:+70611145 | None:intergenic |
| GGTTCTCTGTAACTTCACTC+CGG | 0.666443 | 7_1:-70606815 | Msa1034900:CDS |
| GTATCGGCTGTTCAGCGGAG+AGG | 0.668187 | 7_1:-70606318 | Msa1034900:CDS |
| GAGAACGACGAAAGGCGAGG+TGG | 0.669891 | 7_1:-70607060 | Msa1034900:CDS |
| TGGATCAGTTGGGATCTCCA+AGG | 0.674303 | 7_1:+70607575 | None:intergenic |
| GTTCAAATAAATCTGTTGGG+AGG | 0.678740 | 7_1:-70607912 | Msa1034900:CDS |
| ACATCACATTACTAATCCCG+AGG | 0.678772 | 7_1:-70611285 | Msa1034900:five_prime_UTR |
| AGTGAGAACGACGAAAGGCG+AGG | 0.682233 | 7_1:-70607063 | Msa1034900:CDS |
| CTTGGAGGCCTTGAACGGAG+AGG | 0.685220 | 7_1:-70606758 | Msa1034900:intron |
| TGTGGAACGTAGAATGTCAG+CGG | 0.685466 | 7_1:-70606457 | Msa1034900:CDS |
| TTATCAATGATAGATGAAAG+CGG | 0.686319 | 7_1:+70606258 | None:intergenic |
| GGATGAGTTCTGTCCTGACG+CGG | 0.692057 | 7_1:-70606794 | Msa1034900:CDS |
| TGAAGAAAACGGTGAAGGTG+AGG | 0.702094 | 7_1:-70608824 | Msa1034900:CDS |
| AATGCTGAAGAAAACGGTGA+AGG | 0.708600 | 7_1:-70608829 | Msa1034900:CDS |
| TGATGTCAACAGGTCCAAGG+AGG | 0.725266 | 7_1:-70609355 | Msa1034900:intron |
| ACAAGGTTCACACACCTGCG+CGG | 0.727930 | 7_1:-70608669 | Msa1034900:CDS |
| ATACGACACCGATACAACCA+AGG | 0.730986 | 7_1:-70609247 | Msa1034900:CDS |
| GGATAGACAAGTCAGCCAGG+AGG | 0.755346 | 7_1:-70606962 | Msa1034900:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTAAAATTAAAAAAAT+TGG | - | chr7_1:70608943-70608962 | Msa1034900:CDS | 0.0% |
| !!! | TATTTAAAATTAAAAAAATT+GGG | - | chr7_1:70608944-70608963 | Msa1034900:CDS | 0.0% |
| !!! | AGTTTTTTTTTTTTTTTTGA+AGG | - | chr7_1:70606468-70606487 | Msa1034900:intron | 10.0% |
| !! | ATAAGAATATTGAAAATTAT+TGG | - | chr7_1:70606524-70606543 | Msa1034900:intron | 10.0% |
| !! | AATAAAATAAAAAAATCTGA+TGG | + | chr7_1:70606675-70606694 | None:intergenic | 10.0% |
| !! | GAAAATTTGAATTTATAATT+TGG | - | chr7_1:70609648-70609667 | Msa1034900:five_prime_UTR | 10.0% |
| !! | TTTAGTCAAAAGTTAATTAA+AGG | - | chr7_1:70606415-70606434 | Msa1034900:CDS | 15.0% |
| !! | AATTTGAGAAAATGAAATAA+TGG | + | chr7_1:70606784-70606803 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | - | chr7_1:70606789-70606808 | Msa1034900:CDS | 15.0% |
| !! | CCAGTATAAAAAAAAAAAAT+TGG | + | chr7_1:70607046-70607065 | None:intergenic | 15.0% |
| !!! | CCAATTTTTTTTTTTTATAC+TGG | - | chr7_1:70607043-70607062 | Msa1034900:CDS | 15.0% |
| !! | AAATCTATAAACTCAAATAA+AGG | - | chr7_1:70608004-70608023 | Msa1034900:intron | 15.0% |
| !! | TCATAAATTAAATACTTATG+TGG | - | chr7_1:70610116-70610135 | Msa1034900:intron | 15.0% |
| !!! | GTTTATTTTTATTATTATGC+AGG | - | chr7_1:70610177-70610196 | Msa1034900:intron | 15.0% |
| !! | ATTCAGAAGATTAAAAAATA+TGG | - | chr7_1:70611008-70611027 | Msa1034900:five_prime_UTR | 15.0% |
| !! | AAATTGTACGTTAAAATGAT+AGG | + | chr7_1:70605816-70605835 | None:intergenic | 20.0% |
| !! | GGAAACAAAATTAAAGAAAA+GGG | + | chr7_1:70606154-70606173 | None:intergenic | 20.0% |
| !! | AGGAAACAAAATTAAAGAAA+AGG | + | chr7_1:70606155-70606174 | None:intergenic | 20.0% |
| !! | AATTAAAGTACGAAATGAAA+TGG | + | chr7_1:70606291-70606310 | None:intergenic | 20.0% |
| !! | TAAATTAAGATCTAGGAATT+AGG | + | chr7_1:70606380-70606399 | None:intergenic | 20.0% |
| !! | AAAATAAAAAAATCTGATGG+TGG | + | chr7_1:70606672-70606691 | None:intergenic | 20.0% |
| !! | TTAATTTCACTACTTAAGAT+TGG | - | chr7_1:70606860-70606879 | Msa1034900:intron | 20.0% |
| !! | ACACATAGTTATAAAACAAA+TGG | + | chr7_1:70606962-70606981 | None:intergenic | 20.0% |
| !!! | CTTTATGGTTTTTCATTTTT+TGG | - | chr7_1:70607142-70607161 | Msa1034900:CDS | 20.0% |
| !!! | ATAAGTTTCTGAATTTTCTA+AGG | + | chr7_1:70607650-70607669 | None:intergenic | 20.0% |
| !! | GGAATCAAAAATTAAAGAAA+TGG | - | chr7_1:70608261-70608280 | Msa1034900:CDS | 20.0% |
| !! | AAAATTAAAAAAATTGGGGA+AGG | - | chr7_1:70608949-70608968 | Msa1034900:CDS | 20.0% |
| !! | AAATTAAAAAAATTGGGGAA+GGG | - | chr7_1:70608950-70608969 | Msa1034900:CDS | 20.0% |
| !!! | CTTTTTGTTTTTATACTGAT+CGG | - | chr7_1:70609596-70609615 | Msa1034900:intron | 20.0% |
| !! | AAACTTGATATAACTACAAA+TGG | - | chr7_1:70609754-70609773 | Msa1034900:intron | 20.0% |
| !!! | TTTGTCATATAATTGATTTG+AGG | - | chr7_1:70609795-70609814 | Msa1034900:intron | 20.0% |
| !!! | AAGTATTCTGAATTTGAAAT+GGG | - | chr7_1:70610453-70610472 | Msa1034900:intron | 20.0% |
| !! | TGAAATTAAAATTGCAGTAA+AGG | + | chr7_1:70610484-70610503 | None:intergenic | 20.0% |
| !!! | AATAAACAGACAAGATATTT+TGG | - | chr7_1:70611031-70611050 | Msa1034900:five_prime_UTR | 20.0% |
| !! | TATTTATATACACCCAAAAA+AGG | + | chr7_1:70611098-70611117 | None:intergenic | 20.0% |
| !! | TTTGATTAAAATATGTACCA+AGG | + | chr7_1:70611349-70611368 | None:intergenic | 20.0% |
| ! | AACAAATTGTGTTAATGTAG+CGG | - | chr7_1:70606334-70606353 | Msa1034900:CDS | 25.0% |
| ! | GAATGGTTAAATTAAGATCT+AGG | + | chr7_1:70606387-70606406 | None:intergenic | 25.0% |
| !!! | AACTTTTGACTAAATCAACA+AGG | + | chr7_1:70606409-70606428 | None:intergenic | 25.0% |
| ! | TTGTTCACAAATATAATGAG+TGG | - | chr7_1:70606706-70606725 | Msa1034900:intron | 25.0% |
| ! | TACTACATAGATTGTATGTT+TGG | - | chr7_1:70606819-70606838 | Msa1034900:CDS | 25.0% |
| !! | TTGTATGTTTGGTTCATTAT+AGG | - | chr7_1:70606830-70606849 | Msa1034900:CDS | 25.0% |
| !! | TCATATCTCTTGAATTTTAG+TGG | - | chr7_1:70607216-70607235 | Msa1034900:intron | 25.0% |
| !!! | TTTAAGCACTATATTTTTGC+AGG | - | chr7_1:70607290-70607309 | Msa1034900:intron | 25.0% |
| ! | AAAAGAAACTGAATCTAAGA+CGG | - | chr7_1:70607624-70607643 | Msa1034900:CDS | 25.0% |
| ! | GAAAATCTAGTTACATTATG+TGG | - | chr7_1:70607670-70607689 | Msa1034900:intron | 25.0% |
| ! | TTCAAAAGATCCAAAAAGTA+AGG | - | chr7_1:70607883-70607902 | Msa1034900:CDS | 25.0% |
| ! | AACAAATAAACTGCAATCAA+AGG | - | chr7_1:70607961-70607980 | Msa1034900:intron | 25.0% |
| ! | ATTGTTAATGCTGAAGAAAA+CGG | - | chr7_1:70608214-70608233 | Msa1034900:CDS | 25.0% |
| ! | ATGATTTAGCAACCAAAATA+AGG | + | chr7_1:70608489-70608508 | None:intergenic | 25.0% |
| ! | AGATAATTTCACAAGCATTT+GGG | - | chr7_1:70608662-70608681 | Msa1034900:CDS | 25.0% |
| ! | AATTAAAAAAATTGGGGAAG+GGG | - | chr7_1:70608951-70608970 | Msa1034900:CDS | 25.0% |
| !!! | TTATTTTACAACAATCCTGA+AGG | - | chr7_1:70609011-70609030 | Msa1034900:CDS | 25.0% |
| !! | TATTTTACAACAATCCTGAA+GGG | - | chr7_1:70609012-70609031 | Msa1034900:CDS | 25.0% |
| ! | TAGATTAAAATTCATTCACC+AGG | - | chr7_1:70609388-70609407 | Msa1034900:intron | 25.0% |
| ! | TTCATAGATACTGTAAAGAA+TGG | + | chr7_1:70609722-70609741 | None:intergenic | 25.0% |
| !! | AAATGGATTTGCAAAATATG+TGG | - | chr7_1:70609771-70609790 | Msa1034900:intron | 25.0% |
| ! | AATTTATGAAATTAACCTCC+TGG | + | chr7_1:70610105-70610124 | None:intergenic | 25.0% |
| ! | TATAATCAATGAAAGACTGA+TGG | + | chr7_1:70610212-70610231 | None:intergenic | 25.0% |
| !! | TCAGTCTTTCATTGATTATA+CGG | - | chr7_1:70610212-70610231 | Msa1034900:intron | 25.0% |
| ! | TAATATTGATGTAGAACTCA+TGG | - | chr7_1:70610383-70610402 | Msa1034900:intron | 25.0% |
| !! | GAAGTATTCTGAATTTGAAA+TGG | - | chr7_1:70610452-70610471 | Msa1034900:intron | 25.0% |
| !!! | ACTGCAATTTTAATTTCACT+TGG | - | chr7_1:70610486-70610505 | Msa1034900:intron | 25.0% |
| ! | TTATCAATGATAGATGAAAG+CGG | + | chr7_1:70610794-70610813 | None:intergenic | 25.0% |
| ! | CTAAAGTAAAAATGAATGTC+AGG | - | chr7_1:70610969-70610988 | Msa1034900:intron | 25.0% |
| ! | AAAATGAATGTCAGGAATTT+AGG | - | chr7_1:70610977-70610996 | Msa1034900:intron | 25.0% |
| !!! | TTTTGGAATTCTTCATTACT+AGG | - | chr7_1:70611048-70611067 | Msa1034900:five_prime_UTR | 25.0% |
| !! | TTTGGAATTCTTCATTACTA+GGG | - | chr7_1:70611049-70611068 | Msa1034900:five_prime_UTR | 25.0% |
| ! | TTCATTACTAGGGAAAATTA+AGG | - | chr7_1:70611059-70611078 | Msa1034900:five_prime_UTR | 25.0% |
| ! | ATTCTTTAATGCTACTCTTA+AGG | + | chr7_1:70611126-70611145 | None:intergenic | 25.0% |
| ! | TTATCAAACAAACATGAAGA+AGG | + | chr7_1:70611168-70611187 | None:intergenic | 25.0% |
| ! | TCATCGATATATGCTTATTA+AGG | - | chr7_1:70611300-70611319 | Msa1034900:five_prime_UTR | 25.0% |
| ! | TATATGCTTATTAAGGATGA+TGG | - | chr7_1:70611307-70611326 | Msa1034900:five_prime_UTR | 25.0% |
| !!! | TTATTAAGGATGATGGATTT+AGG | - | chr7_1:70611314-70611333 | Msa1034900:five_prime_UTR | 25.0% |
| TTGACTAAATCAACAAGGAA+TGG | + | chr7_1:70606404-70606423 | None:intergenic | 30.0% | |
| !! | TGATTTGATGATGATGTTGA+CGG | - | chr7_1:70606583-70606602 | Msa1034900:intron | 30.0% |
| CACAAATATAATGAGTGGTA+TGG | - | chr7_1:70606711-70606730 | Msa1034900:intron | 30.0% | |
| TTAACCCCACTTTCTAATTA+AGG | - | chr7_1:70607006-70607025 | Msa1034900:CDS | 30.0% | |
| AAGACCTTAATTAGAAAGTG+GGG | + | chr7_1:70607013-70607032 | None:intergenic | 30.0% | |
| GAAGACCTTAATTAGAAAGT+GGG | + | chr7_1:70607014-70607033 | None:intergenic | 30.0% | |
| TGAAGACCTTAATTAGAAAG+TGG | + | chr7_1:70607015-70607034 | None:intergenic | 30.0% | |
| ATCAATTGCAACAGAAAGAA+GGG | + | chr7_1:70607089-70607108 | None:intergenic | 30.0% | |
| AATCAATTGCAACAGAAAGA+AGG | + | chr7_1:70607090-70607109 | None:intergenic | 30.0% | |
| ATCACAATGAGAATCAAAAC+AGG | + | chr7_1:70607168-70607187 | None:intergenic | 30.0% | |
| TCTCATTGTGATGAATGATT+TGG | - | chr7_1:70607176-70607195 | Msa1034900:intron | 30.0% | |
| ! | AAAAGTGCATACACAATCTT+GGG | + | chr7_1:70607357-70607376 | None:intergenic | 30.0% |
| ! | TAAAAGTGCATACACAATCT+TGG | + | chr7_1:70607358-70607377 | None:intergenic | 30.0% |
| ! | AGATTGTGTATGCACTTTTA+TGG | - | chr7_1:70607358-70607377 | Msa1034900:intron | 30.0% |
| ATGATAGGATTTACTAACCT+TGG | + | chr7_1:70607434-70607453 | None:intergenic | 30.0% | |
| TGAAAGAAATTGAGAAGAGA+AGG | - | chr7_1:70607509-70607528 | Msa1034900:CDS | 30.0% | |
| GAAAGAAATTGAGAAGAGAA+GGG | - | chr7_1:70607510-70607529 | Msa1034900:CDS | 30.0% | |
| AAAGAAATTGAGAAGAGAAG+GGG | - | chr7_1:70607511-70607530 | Msa1034900:CDS | 30.0% | |
| AGAGTTCAAAAAGAACAGAA+AGG | - | chr7_1:70607554-70607573 | Msa1034900:CDS | 30.0% | |
| TAATGAATCCTTGGTTGTAT+CGG | + | chr7_1:70607813-70607832 | None:intergenic | 30.0% | |
| ! | TTGAGATGATAATGAATCCT+TGG | + | chr7_1:70607822-70607841 | None:intergenic | 30.0% |
| AAGGATTCATTATCATCTCA+AGG | - | chr7_1:70607821-70607840 | Msa1034900:CDS | 30.0% | |
| ! | AATTCTTTAGAAAGCAATCG+TGG | - | chr7_1:70607914-70607933 | Msa1034900:CDS | 30.0% |
| TGATGAAAAACCTGTTATAG+AGG | - | chr7_1:70608117-70608136 | Msa1034900:intron | 30.0% | |
| AAAACCTGTTATAGAGGTTA+AGG | - | chr7_1:70608123-70608142 | Msa1034900:intron | 30.0% | |
| ATTTCCTTAACCTCTATAAC+AGG | + | chr7_1:70608130-70608149 | None:intergenic | 30.0% | |
| GGTTAAGGAAATTGAAATCT+TGG | - | chr7_1:70608138-70608157 | Msa1034900:intron | 30.0% | |
| AAGGAAATTGAAATCTTGGA+TGG | - | chr7_1:70608142-70608161 | Msa1034900:intron | 30.0% | |
| ACGAATTGAAAATCTTGAAG+AGG | - | chr7_1:70608288-70608307 | Msa1034900:CDS | 30.0% | |
| ATATACATGCTTGTAAGCAT+TGG | - | chr7_1:70608419-70608438 | Msa1034900:CDS | 30.0% | |
| !!! | ATTTTGGTTGCTAAATCATG+CGG | - | chr7_1:70608490-70608509 | Msa1034900:intron | 30.0% |
| AATTATCTCTCTCAGAACAA+TGG | + | chr7_1:70608650-70608669 | None:intergenic | 30.0% | |
| GAGATAATTTCACAAGCATT+TGG | - | chr7_1:70608661-70608680 | Msa1034900:CDS | 30.0% | |
| CATTTCCTGATTTACCATTT+GGG | + | chr7_1:70608786-70608805 | None:intergenic | 30.0% | |
| GAAGGGGAAGTTATTATTAA+TGG | - | chr7_1:70608967-70608986 | Msa1034900:CDS | 30.0% | |
| TCCTGTTCAAATAAATCTGT+TGG | - | chr7_1:70609133-70609152 | Msa1034900:CDS | 30.0% | |
| CCTGTTCAAATAAATCTGTT+GGG | - | chr7_1:70609134-70609153 | Msa1034900:CDS | 30.0% | |
| ACTAGAAACATAATCAAGCA+AGG | + | chr7_1:70609332-70609351 | None:intergenic | 30.0% | |
| TTAATCTACTCAATCCTTTG+AGG | + | chr7_1:70609376-70609395 | None:intergenic | 30.0% | |
| AAAACCTTTGAATCCACAAT+TGG | + | chr7_1:70609509-70609528 | None:intergenic | 30.0% | |
| TAACTCTTCCATAAGCATAA+AGG | + | chr7_1:70609876-70609895 | None:intergenic | 30.0% | |
| ! | TATCCATAAGCATGTCTTTT+GGG | + | chr7_1:70610072-70610091 | None:intergenic | 30.0% |
| ATAAATGCAATGACAACGTA+AGG | + | chr7_1:70610153-70610172 | None:intergenic | 30.0% | |
| ! | CGTTGTCATTGCATTTATTT+TGG | - | chr7_1:70610155-70610174 | Msa1034900:intron | 30.0% |
| ! | CAGTCTTTCATTGATTATAC+GGG | - | chr7_1:70610213-70610232 | Msa1034900:intron | 30.0% |
| ! | ATTTTTCTTGTCTGTTACGA+AGG | - | chr7_1:70610324-70610343 | Msa1034900:intron | 30.0% |
| TTCCTTTGCTAATGCAAAAT+CGG | + | chr7_1:70610423-70610442 | None:intergenic | 30.0% | |
| ATTTCATCCTTAGACTATTG+TGG | - | chr7_1:70610574-70610593 | Msa1034900:intron | 30.0% | |
| GCTTTCATCTATCATTGATA+AGG | - | chr7_1:70610793-70610812 | Msa1034900:intron | 30.0% | |
| !!! | TCAATTTCCCTTCCTTTTTT+GGG | - | chr7_1:70611083-70611102 | Msa1034900:five_prime_UTR | 30.0% |
| ATATACACCCAAAAAAGGAA+GGG | + | chr7_1:70611093-70611112 | None:intergenic | 30.0% | |
| TATATACACCCAAAAAAGGA+AGG | + | chr7_1:70611094-70611113 | None:intergenic | 30.0% | |
| ! | GTGTACAAACTTCTTTTACA+AGG | - | chr7_1:70611229-70611248 | Msa1034900:five_prime_UTR | 30.0% |
| !! | ATGATGGATTTAGGAATTCA+TGG | - | chr7_1:70611323-70611342 | Msa1034900:five_prime_UTR | 30.0% |
| !! | TGAGAGAGTGTTTAGTTTAG+GGG | + | chr7_1:70605698-70605717 | None:intergenic | 35.0% |
| !! | GTGAGAGAGTGTTTAGTTTA+GGG | + | chr7_1:70605699-70605718 | None:intergenic | 35.0% |
| !! | AGTGAGAGAGTGTTTAGTTT+AGG | + | chr7_1:70605700-70605719 | None:intergenic | 35.0% |
| !!! | TCGTTCTGTGTTTTTTGTAG+TGG | + | chr7_1:70605739-70605758 | None:intergenic | 35.0% |
| AGAGAAAAAGAGAAATCCTC+GGG | + | chr7_1:70605783-70605802 | None:intergenic | 35.0% | |
| CAGAGAAAAAGAGAAATCCT+CGG | + | chr7_1:70605784-70605803 | None:intergenic | 35.0% | |
| AACAGTTAAACACGTTACGT+TGG | + | chr7_1:70605882-70605901 | None:intergenic | 35.0% | |
| CGTAATGATAAATGAGTGTG+GGG | + | chr7_1:70605905-70605924 | None:intergenic | 35.0% | |
| CCGTAATGATAAATGAGTGT+GGG | + | chr7_1:70605906-70605925 | None:intergenic | 35.0% | |
| CCCACACTCATTTATCATTA+CGG | - | chr7_1:70605903-70605922 | Msa1034900:three_prime_UTR | 35.0% | |
| ACCGTAATGATAAATGAGTG+TGG | + | chr7_1:70605907-70605926 | None:intergenic | 35.0% | |
| CAAGTACATACATACAGAGA+AGG | + | chr7_1:70606175-70606194 | None:intergenic | 35.0% | |
| GGAAAATGAAGTTACGTAGA+AGG | + | chr7_1:70606264-70606283 | None:intergenic | 35.0% | |
| AGTACGAAATGAAATGGAGA+TGG | + | chr7_1:70606285-70606304 | None:intergenic | 35.0% | |
| TTTCTTCATACTCTACTGCT+AGG | - | chr7_1:70606622-70606641 | Msa1034900:intron | 35.0% | |
| !! | AAAAATCTGATGGTGGAGTA+GGG | + | chr7_1:70606665-70606684 | None:intergenic | 35.0% |
| !! | AAAAAATCTGATGGTGGAGT+AGG | + | chr7_1:70606666-70606685 | None:intergenic | 35.0% |
| !! | CACACAATTCTGGTTCAATT+AGG | + | chr7_1:70606888-70606907 | None:intergenic | 35.0% |
| AGTCATTTGACACACAATTC+TGG | + | chr7_1:70606898-70606917 | None:intergenic | 35.0% | |
| ! | TACTGGCCTGAAATTTAATC+TGG | - | chr7_1:70607060-70607079 | Msa1034900:CDS | 35.0% |
| TTCTGCACTTGTCTTCTTTA+TGG | - | chr7_1:70607127-70607146 | Msa1034900:CDS | 35.0% | |
| !! | CACTATATTTTTGCAGGTAG+TGG | - | chr7_1:70607296-70607315 | Msa1034900:intron | 35.0% |
| ! | TTGTGTATGCACTTTTATGG+TGG | - | chr7_1:70607361-70607380 | Msa1034900:intron | 35.0% |
| AACTTCTCAGAATTGTGCTT+CGG | + | chr7_1:70607393-70607412 | None:intergenic | 35.0% | |
| TCTGAGAAGTTACGTACTTT+AGG | - | chr7_1:70607402-70607421 | Msa1034900:intron | 35.0% | |
| TTGTGACAGGAGAAAATGAT+AGG | + | chr7_1:70607449-70607468 | None:intergenic | 35.0% | |
| ATTATGTGGATGATGTCAAC+AGG | - | chr7_1:70607684-70607703 | Msa1034900:intron | 35.0% | |
| ! | TGATAATCACTCCACTGATT+TGG | - | chr7_1:70607748-70607767 | Msa1034900:intron | 35.0% |
| TTGGAGAAAGAGCAAAAAGA+AGG | - | chr7_1:70607767-70607786 | Msa1034900:CDS | 35.0% | |
| TGGAGAAAGAGCAAAAAGAA+GGG | - | chr7_1:70607768-70607787 | Msa1034900:CDS | 35.0% | |
| !! | TTCGCTCTAACCTTACTTTT+TGG | + | chr7_1:70607896-70607915 | None:intergenic | 35.0% |
| AAACTGCAATCAAAGGTAAC+AGG | - | chr7_1:70607968-70607987 | Msa1034900:intron | 35.0% | |
| !! | CTTTTGTTTGTAACTCTTGC+AGG | + | chr7_1:70608031-70608050 | None:intergenic | 35.0% |
| !! | AACTTTCACTGGCTTAGTAT+TGG | + | chr7_1:70608062-70608081 | None:intergenic | 35.0% |
| AGTTCCTGCAAAAGTTTCTT+CGG | - | chr7_1:70608078-70608097 | Msa1034900:intron | 35.0% | |
| ATCTTGGATGGATCTTCTAA+TGG | - | chr7_1:70608154-70608173 | Msa1034900:intron | 35.0% | |
| TATTCTATTGTACCAGAGCA+TGG | - | chr7_1:70608346-70608365 | Msa1034900:CDS | 35.0% | |
| CATGTATATAGAGCCTAGAA+AGG | + | chr7_1:70608408-70608427 | None:intergenic | 35.0% | |
| ATTGCCAAGAATACTGTTTC+TGG | - | chr7_1:70608463-70608482 | Msa1034900:intron | 35.0% | |
| !!! | TACTGTTTCTGGCCTTATTT+TGG | - | chr7_1:70608474-70608493 | Msa1034900:intron | 35.0% |
| ! | TGTGATTCAGGTTAACTTTC+TGG | - | chr7_1:70608614-70608633 | Msa1034900:CDS | 35.0% |
| !! | AAATGGAAAGGTATCCCAAA+TGG | - | chr7_1:70608769-70608788 | Msa1034900:CDS | 35.0% |
| CCATTTCCTGATTTACCATT+TGG | + | chr7_1:70608787-70608806 | None:intergenic | 35.0% | |
| CCAAATGGTAAATCAGGAAA+TGG | - | chr7_1:70608784-70608803 | Msa1034900:CDS | 35.0% | |
| !! | TCTTTCTAAGGCAAACGTAA+AGG | + | chr7_1:70608848-70608867 | None:intergenic | 35.0% |
| ! | TCGAATCATGGATCTTTTCT+CGG | - | chr7_1:70608869-70608888 | Msa1034900:CDS | 35.0% |
| GATTTAAACTCTACCCTTAG+AGG | - | chr7_1:70609034-70609053 | Msa1034900:CDS | 35.0% | |
| ! | GAGAAGTTTTCTGTGCTTTT+AGG | - | chr7_1:70609075-70609094 | Msa1034900:CDS | 35.0% |
| GACTCCTTATATGCAATCTT+CGG | - | chr7_1:70609102-70609121 | Msa1034900:CDS | 35.0% | |
| CTTATATGCAATCTTCGGTT+GGG | - | chr7_1:70609107-70609126 | Msa1034900:CDS | 35.0% | |
| TTATATGCAATCTTCGGTTG+GGG | - | chr7_1:70609108-70609127 | Msa1034900:CDS | 35.0% | |
| CCCAACAGATTTATTTGAAC+AGG | + | chr7_1:70609137-70609156 | None:intergenic | 35.0% | |
| GTTCAAATAAATCTGTTGGG+AGG | - | chr7_1:70609137-70609156 | Msa1034900:CDS | 35.0% | |
| ! | GAAACTTTTCCATCAATCTC+TGG | - | chr7_1:70609194-70609213 | Msa1034900:CDS | 35.0% |
| !! | AGAGTCTTTGAAAAGCATCT+TGG | + | chr7_1:70609231-70609250 | None:intergenic | 35.0% |
| GAGGCTTAGAACAAAAGAAT+GGG | + | chr7_1:70609357-70609376 | None:intergenic | 35.0% | |
| TGAGGCTTAGAACAAAAGAA+TGG | + | chr7_1:70609358-70609377 | None:intergenic | 35.0% | |
| !! | TCTTTTGTTCTAAGCCTCAA+AGG | - | chr7_1:70609359-70609378 | Msa1034900:intron | 35.0% |
| AAAATTCATTCACCAGGTCA+TGG | - | chr7_1:70609394-70609413 | Msa1034900:intron | 35.0% | |
| CGATGTTCAATGCAATTCTT+CGG | - | chr7_1:70609444-70609463 | Msa1034900:intron | 35.0% | |
| GATGTTCAATGCAATTCTTC+GGG | - | chr7_1:70609445-70609464 | Msa1034900:intron | 35.0% | |
| GATCTGATATTGGATCAGTT+GGG | + | chr7_1:70609487-70609506 | None:intergenic | 35.0% | |
| TCCAATATCAGATCCAATTG+TGG | - | chr7_1:70609493-70609512 | Msa1034900:intron | 35.0% | |
| TCCACAATTGGATCTGATAT+TGG | + | chr7_1:70609497-70609516 | None:intergenic | 35.0% | |
| AGATCCAATTGTGGATTCAA+AGG | - | chr7_1:70609502-70609521 | Msa1034900:intron | 35.0% | |
| TGGTGCACAGCTAAAAAATT+CGG | - | chr7_1:70609562-70609581 | Msa1034900:intron | 35.0% | |
| AGATTGCTCACTGATATGTT+TGG | - | chr7_1:70609923-70609942 | Msa1034900:intron | 35.0% | |
| CATTGATGCTGAAGATTGTT+CGG | - | chr7_1:70609946-70609965 | Msa1034900:intron | 35.0% | |
| ! | CTATCCATAAGCATGTCTTT+TGG | + | chr7_1:70610073-70610092 | None:intergenic | 35.0% |
| ATCAATGAAAGACTGATGGA+TGG | + | chr7_1:70610208-70610227 | None:intergenic | 35.0% | |
| AATGGTAATCACAAAGAGCA+AGG | - | chr7_1:70610848-70610867 | Msa1034900:intron | 35.0% | |
| ATGGTAATCACAAAGAGCAA+GGG | - | chr7_1:70610849-70610868 | Msa1034900:intron | 35.0% | |
| ! | TAGTTGATATCTGGCATTTG+TGG | + | chr7_1:70610885-70610904 | None:intergenic | 35.0% |
| ! | TTCACGAAGTAGTTGATATC+TGG | + | chr7_1:70610894-70610913 | None:intergenic | 35.0% |
| ATCAACTACTTCGTGAAGTT+TGG | - | chr7_1:70610897-70610916 | Msa1034900:intron | 35.0% | |
| TTCACAAGTTTCACATCACA+TGG | + | chr7_1:70610924-70610943 | None:intergenic | 35.0% | |
| !!! | CTCAATTTCCCTTCCTTTTT+TGG | - | chr7_1:70611082-70611101 | Msa1034900:five_prime_UTR | 35.0% |
| TAAGCATCAGAATACGACAT+TGG | - | chr7_1:70611254-70611273 | Msa1034900:five_prime_UTR | 35.0% | |
| !! | GAGAGAGTGTTTAGTTTAGG+GGG | + | chr7_1:70605697-70605716 | None:intergenic | 40.0% |
| ACATCACATTACTAATCCCG+AGG | - | chr7_1:70605764-70605783 | Msa1034900:three_prime_UTR | 40.0% | |
| GAACTAACCACAAGAAACAC+GGG | + | chr7_1:70605860-70605879 | None:intergenic | 40.0% | |
| GGAACTAACCACAAGAAACA+CGG | + | chr7_1:70605861-70605880 | None:intergenic | 40.0% | |
| GAAACGAAACGAAACGAAAC+AGG | + | chr7_1:70606040-70606059 | None:intergenic | 40.0% | |
| ! | TATGCTTACTACTTGCTAGC+TGG | + | chr7_1:70606557-70606576 | None:intergenic | 40.0% |
| !! | AAAATCTGATGGTGGAGTAG+GGG | + | chr7_1:70606664-70606683 | None:intergenic | 40.0% |
| !! | AATGAGTGGTATGGCTTTGA+CGG | - | chr7_1:70606720-70606739 | Msa1034900:intron | 40.0% |
| TGGCCTGAAATTTAATCTGG+TGG | - | chr7_1:70607063-70607082 | Msa1034900:CDS | 40.0% | |
| !!! | ACATTGCTGTTTTGAGTCTC+TGG | - | chr7_1:70607320-70607339 | Msa1034900:intron | 40.0% |
| CAAATGAAGAAGCTTGTGAC+AGG | + | chr7_1:70607462-70607481 | None:intergenic | 40.0% | |
| TTGCTCTTTCTCCAAATCAG+TGG | + | chr7_1:70607762-70607781 | None:intergenic | 40.0% | |
| TAGAAAGCAATCGTGGATCA+AGG | - | chr7_1:70607921-70607940 | Msa1034900:CDS | 40.0% | |
| AGAAAGCAATCGTGGATCAA+GGG | - | chr7_1:70607922-70607941 | Msa1034900:CDS | 40.0% | |
| ! | ACTTTTGCAGGAACTTTCAC+TGG | + | chr7_1:70608073-70608092 | None:intergenic | 40.0% |
| ! | GATTCCGAAGAAACTTTTGC+AGG | + | chr7_1:70608085-70608104 | None:intergenic | 40.0% |
| GTTTCTTCGGAATCTTCTGA+AGG | - | chr7_1:70608091-70608110 | Msa1034900:intron | 40.0% | |
| AATGCTGAAGAAAACGGTGA+AGG | - | chr7_1:70608220-70608239 | Msa1034900:CDS | 40.0% | |
| !! | AATCGTTGCTTTCCTTTTCG+GGG | + | chr7_1:70608446-70608465 | None:intergenic | 40.0% |
| !! | CAATCGTTGCTTTCCTTTTC+GGG | + | chr7_1:70608447-70608466 | None:intergenic | 40.0% |
| !! | GCAATCGTTGCTTTCCTTTT+CGG | + | chr7_1:70608448-70608467 | None:intergenic | 40.0% |
| AAGGCCAGAAACAGTATTCT+TGG | + | chr7_1:70608470-70608489 | None:intergenic | 40.0% | |
| CATGCGGTAATGATGTTTCA+AGG | - | chr7_1:70608506-70608525 | Msa1034900:intron | 40.0% | |
| CTGAATCACAAGTCAAGATG+CGG | + | chr7_1:70608604-70608623 | None:intergenic | 40.0% | |
| TCACAAGCATTTGGGAATTC+CGG | - | chr7_1:70608670-70608689 | Msa1034900:CDS | 40.0% | |
| TCTGCATCACTGAAATGGAA+AGG | - | chr7_1:70608757-70608776 | Msa1034900:CDS | 40.0% | |
| GGTATCCCAAATGGTAAATC+AGG | - | chr7_1:70608778-70608797 | Msa1034900:CDS | 40.0% | |
| !!! | GGAAATGGTTTTATGCAGAC+CGG | - | chr7_1:70608799-70608818 | Msa1034900:CDS | 40.0% |
| TAAGGCAAACGTAAAGGTTC+CGG | + | chr7_1:70608842-70608861 | None:intergenic | 40.0% | |
| CCATGATTCGACTCTTTCTA+AGG | + | chr7_1:70608860-70608879 | None:intergenic | 40.0% | |
| CCTTAGAAAGAGTCGAATCA+TGG | - | chr7_1:70608857-70608876 | Msa1034900:CDS | 40.0% | |
| GGTAGAGTTTAAATCCCTTC+AGG | + | chr7_1:70609029-70609048 | None:intergenic | 40.0% | |
| ATCGCATATGCAACCTCTAA+GGG | + | chr7_1:70609050-70609069 | None:intergenic | 40.0% | |
| TATCGCATATGCAACCTCTA+AGG | + | chr7_1:70609051-70609070 | None:intergenic | 40.0% | |
| CCAACCGAAGATTGCATATA+AGG | + | chr7_1:70609109-70609128 | None:intergenic | 40.0% | |
| CCTTATATGCAATCTTCGGT+TGG | - | chr7_1:70609106-70609125 | Msa1034900:CDS | 40.0% | |
| GGATCTGATATTGGATCAGT+TGG | + | chr7_1:70609488-70609507 | None:intergenic | 40.0% | |
| TCCAAAGCTTAAGTTTCCTG+CGG | + | chr7_1:70609540-70609559 | None:intergenic | 40.0% | |
| !! | GGAAACTTAAGCTTTGGATC+TGG | - | chr7_1:70609542-70609561 | Msa1034900:intron | 40.0% |
| TCTTCGCTATCACATCTTAG+AGG | - | chr7_1:70609687-70609706 | Msa1034900:five_prime_UTR | 40.0% | |
| CTTCGCTATCACATCTTAGA+GGG | - | chr7_1:70609688-70609707 | Msa1034900:five_prime_UTR | 40.0% | |
| ATGTGACTCTTGCAGTATCA+AGG | - | chr7_1:70609819-70609838 | Msa1034900:intron | 40.0% | |
| ! | CCATAAGCATAAAGGTGTGT+AGG | + | chr7_1:70609868-70609887 | None:intergenic | 40.0% |
| CCTACACACCTTTATGCTTA+TGG | - | chr7_1:70609865-70609884 | Msa1034900:intron | 40.0% | |
| !!! | TGTCTTTTGGGAGCATTAGA+AGG | + | chr7_1:70610060-70610079 | None:intergenic | 40.0% |
| ! | GTCCGATTTTGCATTAGCAA+AGG | - | chr7_1:70610418-70610437 | Msa1034900:intron | 40.0% |
| CTACGTTCCACAATAGTCTA+AGG | + | chr7_1:70610584-70610603 | None:intergenic | 40.0% | |
| GCTATAAGGGAAGCTTCTAA+TGG | + | chr7_1:70610621-70610640 | None:intergenic | 40.0% | |
| TCACCTGACAAGGAATGTAT+CGG | - | chr7_1:70610715-70610734 | Msa1034900:intron | 40.0% | |
| TACAAGCGATGAAGAACTTG+AGG | - | chr7_1:70610757-70610776 | Msa1034900:intron | 40.0% | |
| TTTCCATTTGTAGCGACTGT+TGG | + | chr7_1:70610830-70610849 | None:intergenic | 40.0% | |
| ACAGTCGCTACAAATGGAAA+TGG | - | chr7_1:70610830-70610849 | Msa1034900:intron | 40.0% | |
| TTGATATCTGGCATTTGTGG+TGG | + | chr7_1:70610882-70610901 | None:intergenic | 40.0% | |
| GATTTAGGAATTCATGGCCT+TGG | - | chr7_1:70611329-70611348 | Msa1034900:five_prime_UTR | 40.0% | |
| GACAAGACAGAACAGAGAAG+AGG | + | chr7_1:70606018-70606037 | None:intergenic | 45.0% | |
| GTTTACGAGACAGACACATG+TGG | - | chr7_1:70606751-70606770 | Msa1034900:intron | 45.0% | |
| GGGCCACCAGATTAAATTTC+AGG | + | chr7_1:70607069-70607088 | None:intergenic | 45.0% | |
| ATACGACACCGATACAACCA+AGG | - | chr7_1:70607802-70607821 | Msa1034900:CDS | 45.0% | |
| TCTAATGGCGCTCAAAGTGT+AGG | - | chr7_1:70608169-70608188 | Msa1034900:CDS | 45.0% | |
| TGAAGAAAACGGTGAAGGTG+AGG | - | chr7_1:70608225-70608244 | Msa1034900:CDS | 45.0% | |
| !! | CGCATCTTGACTTGTGATTC+AGG | - | chr7_1:70608602-70608621 | Msa1034900:CDS | 45.0% |
| !! | CATAATGGGACTGACTTGAC+CGG | + | chr7_1:70608692-70608711 | None:intergenic | 45.0% |
| GTCAAGTCAGTCCCATTATG+AGG | - | chr7_1:70608692-70608711 | Msa1034900:CDS | 45.0% | |
| AGTCAGTCCCATTATGAGGT+TGG | - | chr7_1:70608696-70608715 | Msa1034900:CDS | 45.0% | |
| AGACTTCCCATCATTCCTCT+TGG | + | chr7_1:70608740-70608759 | None:intergenic | 45.0% | |
| GGAAGTCTGCATCACTGAAA+TGG | - | chr7_1:70608752-70608771 | Msa1034900:CDS | 45.0% | |
| TTATGCAGACCGGTGAAGAT+TGG | - | chr7_1:70608809-70608828 | Msa1034900:CDS | 45.0% | |
| ! | CTTTTCTCGGCTAGTAGAGT+CGG | - | chr7_1:70608882-70608901 | Msa1034900:CDS | 45.0% |
| TGATTGTGATCACCTAGAGC+AGG | + | chr7_1:70609172-70609191 | None:intergenic | 45.0% | |
| ! | GCTCTAGGTGATCACAATCA+AGG | - | chr7_1:70609172-70609191 | Msa1034900:CDS | 45.0% |
| AGCGTTTCTCCAGAGATTGA+TGG | + | chr7_1:70609206-70609225 | None:intergenic | 45.0% | |
| CATACCATTCTTGCCATCAC+AGG | + | chr7_1:70609292-70609311 | None:intergenic | 45.0% | |
| AATTCTTCGGGAATCAGCCT+TGG | - | chr7_1:70609457-70609476 | Msa1034900:intron | 45.0% | |
| CTTAAGTTTCCTGCGGGAAT+CGG | + | chr7_1:70609533-70609552 | None:intergenic | 45.0% | |
| CCAAAGCTTAAGTTTCCTGC+GGG | + | chr7_1:70609539-70609558 | None:intergenic | 45.0% | |
| GGAAGAGTTACTTGAACTGC+AGG | - | chr7_1:70609886-70609905 | Msa1034900:intron | 45.0% | |
| GAGTTACTTGAACTGCAGGT+TGG | - | chr7_1:70609890-70609909 | Msa1034900:intron | 45.0% | |
| ! | TTGAACTGCAGGTTGGCAAT+TGG | - | chr7_1:70609897-70609916 | Msa1034900:intron | 45.0% |
| AGAACAGTGAGAACGACGAA+AGG | - | chr7_1:70609981-70610000 | Msa1034900:intron | 45.0% | |
| GAAGGTCACTCAAGTCGTTA+AGG | + | chr7_1:70610042-70610061 | None:intergenic | 45.0% | |
| GCTCCCAAAAGACATGCTTA+TGG | - | chr7_1:70610066-70610085 | Msa1034900:intron | 45.0% | |
| TATGGATAGACAAGTCAGCC+AGG | - | chr7_1:70610084-70610103 | Msa1034900:intron | 45.0% | |
| GGTTCTCTGTAACTTCACTC+CGG | - | chr7_1:70610234-70610253 | Msa1034900:intron | 45.0% | |
| TGTGGAACGTAGAATGTCAG+CGG | - | chr7_1:70610592-70610611 | Msa1034900:intron | 45.0% | |
| TAGAAGCTTCCCTTATAGCG+CGG | - | chr7_1:70610622-70610641 | Msa1034900:intron | 45.0% | |
| TCTCCAACAGTCGCTACAAA+TGG | - | chr7_1:70610824-70610843 | Msa1034900:intron | 45.0% | |
| GCATCAGAATACGACATTGG+AGG | - | chr7_1:70611257-70611276 | Msa1034900:five_prime_UTR | 45.0% | |
| !!! | ATTTAAAATTAAAAAAATTG+GGG | - | chr7_1:70608945-70608964 | Msa1034900:CDS | 5.0% |
| AACCACAAGAAACACGGGCA+GGG | + | chr7_1:70605855-70605874 | None:intergenic | 50.0% | |
| TAACCACAAGAAACACGGGC+AGG | + | chr7_1:70605856-70605875 | None:intergenic | 50.0% | |
| ! | CGTACTTTAGGAGCTTGCCA+AGG | - | chr7_1:70607414-70607433 | Msa1034900:intron | 50.0% |
| GGATGATGTCAACAGGTCCA+AGG | - | chr7_1:70607691-70607710 | Msa1034900:intron | 50.0% | |
| TGATGTCAACAGGTCCAAGG+AGG | - | chr7_1:70607694-70607713 | Msa1034900:intron | 50.0% | |
| CATCTTGACAAGTGCCTCCT+TGG | + | chr7_1:70607711-70607730 | None:intergenic | 50.0% | |
| GAAAACGGTGAAGGTGAGGA+TGG | - | chr7_1:70608229-70608248 | Msa1034900:CDS | 50.0% | |
| !! | GTAAGCATTGGACCCCGAAA+AGG | - | chr7_1:70608431-70608450 | Msa1034900:intron | 50.0% |
| AGTCCCATTATGAGGTTGGC+TGG | - | chr7_1:70608700-70608719 | Msa1034900:CDS | 50.0% | |
| ! | GTCCCATTATGAGGTTGGCT+GGG | - | chr7_1:70608701-70608720 | Msa1034900:CDS | 50.0% |
| GACCCAGCCAACCTCATAAT+GGG | + | chr7_1:70608706-70608725 | None:intergenic | 50.0% | |
| TGACCCAGCCAACCTCATAA+TGG | + | chr7_1:70608707-70608726 | None:intergenic | 50.0% | |
| ! | ATGAGGTTGGCTGGGTCAAA+TGG | - | chr7_1:70608709-70608728 | Msa1034900:CDS | 50.0% |
| ! | TGAGGTTGGCTGGGTCAAAT+GGG | - | chr7_1:70608710-70608729 | Msa1034900:CDS | 50.0% |
| GGTCTGCCAAGAGGAATGAT+GGG | - | chr7_1:70608731-70608750 | Msa1034900:CDS | 50.0% | |
| GGTCTCTTGCCAATCTTCAC+CGG | + | chr7_1:70608821-70608840 | None:intergenic | 50.0% | |
| GGTGAAGATTGGCAAGAGAC+CGG | - | chr7_1:70608820-70608839 | Msa1034900:CDS | 50.0% | |
| AAATCTGTTGGGAGGCTGCT+AGG | - | chr7_1:70609145-70609164 | Msa1034900:CDS | 50.0% | |
| CTTGCCTGTGATGGCAAGAA+TGG | - | chr7_1:70609285-70609304 | Msa1034900:CDS | 50.0% | |
| CTATGCACTGTTCCATGACC+TGG | + | chr7_1:70609409-70609428 | None:intergenic | 50.0% | |
| TGGATCAGTTGGGATCTCCA+AGG | + | chr7_1:70609477-70609496 | None:intergenic | 50.0% | |
| CCCGCAGGAAACTTAAGCTT+TGG | - | chr7_1:70609536-70609555 | Msa1034900:intron | 50.0% | |
| TCGTCGTTCTCACTGTTCTC+TGG | + | chr7_1:70609980-70609999 | None:intergenic | 50.0% | |
| CAAGCATACCTCTCCGTTCA+AGG | + | chr7_1:70610302-70610321 | None:intergenic | 50.0% | |
| ! | GAGGGAGGCATATACACAAC+TGG | + | chr7_1:70610650-70610669 | None:intergenic | 50.0% |
| !! | GAGGAAAGTGTCACCTGACA+AGG | - | chr7_1:70610705-70610724 | Msa1034900:intron | 50.0% |
| CAGCCGATACATTCCTTGTC+AGG | + | chr7_1:70610721-70610740 | None:intergenic | 50.0% | |
| !! | GGAATGTATCGGCTGTTCAG+CGG | - | chr7_1:70610726-70610745 | Msa1034900:intron | 50.0% |
| GTAGCGACTGTTGGAGATGA+AGG | + | chr7_1:70610821-70610840 | None:intergenic | 50.0% | |
| TACCCTGCCCGTGTTTCTTG+TGG | - | chr7_1:70605850-70605869 | Msa1034900:three_prime_UTR | 55.0% | |
| CGTGTGTCTGTGTGTGTGGT+AGG | + | chr7_1:70606083-70606102 | None:intergenic | 55.0% | |
| TGAGCGTGTGTCTGTGTGTG+TGG | + | chr7_1:70606087-70606106 | None:intergenic | 55.0% | |
| GAGAGAAGTTGCTGCTCTCG+AGG | - | chr7_1:70608315-70608334 | Msa1034900:CDS | 55.0% | |
| TGTGCTGAGCTACCATGCTC+TGG | + | chr7_1:70608361-70608380 | None:intergenic | 55.0% | |
| GCATGGTAGCTCAGCACACA+AGG | - | chr7_1:70608363-70608382 | Msa1034900:CDS | 55.0% | |
| ACAAGGTTCACACACCTGCG+CGG | - | chr7_1:70608380-70608399 | Msa1034900:CDS | 55.0% | |
| GGTCAAATGGGTCTGCCAAG+AGG | - | chr7_1:70608722-70608741 | Msa1034900:CDS | 55.0% | |
| GGGTCTGCCAAGAGGAATGA+TGG | - | chr7_1:70608730-70608749 | Msa1034900:CDS | 55.0% | |
| AGACTCTGTCCTCTTCGAGC+AGG | - | chr7_1:70609244-70609263 | Msa1034900:CDS | 55.0% | |
| TCTGTCCTCTTCGAGCAGGA+GGG | - | chr7_1:70609248-70609267 | Msa1034900:CDS | 55.0% | |
| GTGTGGTTGCTTGCCTGTGA+TGG | - | chr7_1:70609276-70609295 | Msa1034900:CDS | 55.0% | |
| !!! | AAGGTTTTGCCGATTCCCGC+AGG | - | chr7_1:70609521-70609540 | Msa1034900:intron | 55.0% |
| AGTGAGAACGACGAAAGGCG+AGG | - | chr7_1:70609986-70610005 | Msa1034900:intron | 55.0% | |
| GGATAGACAAGTCAGCCAGG+AGG | - | chr7_1:70610087-70610106 | Msa1034900:intron | 55.0% | |
| GCGTCAGGACAGAACTCATC+CGG | + | chr7_1:70610256-70610275 | None:intergenic | 55.0% | |
| GGATGAGTTCTGTCCTGACG+CGG | - | chr7_1:70610255-70610274 | Msa1034900:intron | 55.0% | |
| GCTGTCTTGGAGGCCTTGAA+CGG | - | chr7_1:70610286-70610305 | Msa1034900:intron | 55.0% | |
| CAACTGGAGCCGCGCTATAA+GGG | + | chr7_1:70610634-70610653 | None:intergenic | 55.0% | |
| ACAACTGGAGCCGCGCTATA+AGG | + | chr7_1:70610635-70610654 | None:intergenic | 55.0% | |
| GAGAAAGTTGCAGAGGCAGG+AGG | - | chr7_1:70610686-70610705 | Msa1034900:intron | 55.0% | |
| CGGTGAAGGTGAGGATGGTG+CGG | - | chr7_1:70608234-70608253 | Msa1034900:CDS | 60.0% | |
| AGGTGAGGATGGTGCGGCTA+TGG | - | chr7_1:70608240-70608259 | Msa1034900:CDS | 60.0% | |
| CTCGGCTAGTAGAGTCGGTG+TGG | - | chr7_1:70608887-70608906 | Msa1034900:CDS | 60.0% | |
| GGCTAGTAGAGTCGGTGTGG+TGG | - | chr7_1:70608890-70608909 | Msa1034900:CDS | 60.0% | |
| AGTAGAGTCGGTGTGGTGGC+AGG | - | chr7_1:70608894-70608913 | Msa1034900:CDS | 60.0% | |
| AGGCTGCTAGGACCTGCTCT+AGG | - | chr7_1:70609157-70609176 | Msa1034900:CDS | 60.0% | |
| CTCTGTCCTCTTCGAGCAGG+AGG | - | chr7_1:70609247-70609266 | Msa1034900:CDS | 60.0% | |
| GAGAACGACGAAAGGCGAGG+TGG | - | chr7_1:70609989-70610008 | Msa1034900:intron | 60.0% | |
| TTCTGTCCTGACGCGGTTCC+AGG | - | chr7_1:70610262-70610281 | Msa1034900:intron | 60.0% | |
| GGTTCCAGGAGCTGTCTTGG+AGG | - | chr7_1:70610276-70610295 | Msa1034900:intron | 60.0% | |
| AAGGCCTCCAAGACAGCTCC+TGG | + | chr7_1:70610283-70610302 | None:intergenic | 60.0% | |
| CTTGGAGGCCTTGAACGGAG+AGG | - | chr7_1:70610291-70610310 | Msa1034900:intron | 60.0% | |
| !! | GTATCGGCTGTTCAGCGGAG+AGG | - | chr7_1:70610731-70610750 | Msa1034900:intron | 60.0% |
| TCGTGCCCTCCTGCTCGAAG+AGG | + | chr7_1:70609256-70609275 | None:intergenic | 65.0% | |
| ACAGCTCCTGGAACCGCGTC+AGG | + | chr7_1:70610271-70610290 | None:intergenic | 65.0% | |
| CGCGGTTCCAGGAGCTGTCT+TGG | - | chr7_1:70610273-70610292 | Msa1034900:intron | 65.0% | |
| GCCTCCCTCGTCAGCCAATG+TGG | - | chr7_1:70610661-70610680 | Msa1034900:intron | 65.0% | |
| ! | GCCACATTGGCTGACGAGGG+AGG | + | chr7_1:70610665-70610684 | None:intergenic | 65.0% |
| CACCTGCGCGGCGCCTTTCT+AGG | - | chr7_1:70608392-70608411 | Msa1034900:CDS | 70.0% | |
| !! | AGCCTAGAAAGGCGCCGCGC+AGG | + | chr7_1:70608397-70608416 | None:intergenic | 70.0% |
| ! | CGAGCAGGAGGGCACGAGTG+TGG | - | chr7_1:70609259-70609278 | Msa1034900:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 70605686 | 70611385 | 70605686 | ID=Msa1034900;Name=Msa1034900 |
| chr7_1 | mRNA | 70605686 | 70611385 | 70605686 | ID=Msa1034900-mRNA-1;Parent=Msa1034900;Name=Msa1034900-mRNA-1;_AED=0.17;_eAED=0.17;_QI=528|1|1|1|0.75|0.66|9|457|710 |
| chr7_1 | exon | 70605686 | 70606484 | 70605686 | ID=Msa1034900-mRNA-1:exon:16943;Parent=Msa1034900-mRNA-1 |
| chr7_1 | exon | 70606759 | 70606872 | 70606759 | ID=Msa1034900-mRNA-1:exon:16942;Parent=Msa1034900-mRNA-1 |
| chr7_1 | exon | 70606963 | 70607163 | 70606963 | ID=Msa1034900-mRNA-1:exon:16941;Parent=Msa1034900-mRNA-1 |
| chr7_1 | exon | 70607488 | 70607661 | 70607488 | ID=Msa1034900-mRNA-1:exon:16940;Parent=Msa1034900-mRNA-1 |
| chr7_1 | exon | 70607765 | 70607974 | 70607765 | ID=Msa1034900-mRNA-1:exon:16939;Parent=Msa1034900-mRNA-1 |
| chr7_1 | exon | 70608156 | 70608447 | 70608156 | ID=Msa1034900-mRNA-1:exon:16938;Parent=Msa1034900-mRNA-1 |
| chr7_1 | exon | 70608544 | 70609365 | 70608544 | ID=Msa1034900-mRNA-1:exon:16937;Parent=Msa1034900-mRNA-1 |
| chr7_1 | exon | 70609636 | 70609759 | 70609636 | ID=Msa1034900-mRNA-1:exon:16936;Parent=Msa1034900-mRNA-1 |
| chr7_1 | exon | 70611004 | 70611385 | 70611004 | ID=Msa1034900-mRNA-1:exon:16935;Parent=Msa1034900-mRNA-1 |
| chr7_1 | five_prime_UTR | 70611004 | 70611385 | 70611004 | ID=Msa1034900-mRNA-1:five_prime_utr;Parent=Msa1034900-mRNA-1 |
| chr7_1 | five_prime_UTR | 70609636 | 70609759 | 70609636 | ID=Msa1034900-mRNA-1:five_prime_utr;Parent=Msa1034900-mRNA-1 |
| chr7_1 | five_prime_UTR | 70609344 | 70609365 | 70609344 | ID=Msa1034900-mRNA-1:five_prime_utr;Parent=Msa1034900-mRNA-1 |
| chr7_1 | CDS | 70608544 | 70609343 | 70608544 | ID=Msa1034900-mRNA-1:cds;Parent=Msa1034900-mRNA-1 |
| chr7_1 | CDS | 70608156 | 70608447 | 70608156 | ID=Msa1034900-mRNA-1:cds;Parent=Msa1034900-mRNA-1 |
| chr7_1 | CDS | 70607765 | 70607974 | 70607765 | ID=Msa1034900-mRNA-1:cds;Parent=Msa1034900-mRNA-1 |
| chr7_1 | CDS | 70607488 | 70607661 | 70607488 | ID=Msa1034900-mRNA-1:cds;Parent=Msa1034900-mRNA-1 |
| chr7_1 | CDS | 70606963 | 70607163 | 70606963 | ID=Msa1034900-mRNA-1:cds;Parent=Msa1034900-mRNA-1 |
| chr7_1 | CDS | 70606759 | 70606872 | 70606759 | ID=Msa1034900-mRNA-1:cds;Parent=Msa1034900-mRNA-1 |
| chr7_1 | CDS | 70606143 | 70606484 | 70606143 | ID=Msa1034900-mRNA-1:cds;Parent=Msa1034900-mRNA-1 |
| chr7_1 | three_prime_UTR | 70605686 | 70606142 | 70605686 | ID=Msa1034900-mRNA-1:three_prime_utr;Parent=Msa1034900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
