AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1075500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1075500 MtrunA17_Chr7g0259101 74.300 393 44 4 1 336 1 393 0.0 557
Msa1075500 MtrunA17_Chr7g0259091 87.634 186 23 0 151 336 9 194 5.22e-118 338
Msa1075500 MtrunA17_Chr7g0259091 86.577 149 10 2 1 139 1 149 1.97e-85 256
Msa1075500 MtrunA17_Chr7g0259071 80.000 160 32 0 177 336 32 191 1.12e-94 279
Msa1075500 MtrunA17_Chr7g0259071 67.702 161 39 3 1 150 1 159 4.84e-66 206
Msa1075500 MtrunA17_Chr7g0259121 59.394 165 61 3 177 336 30 193 3.54e-65 205
Msa1075500 MtrunA17_Chr7g0259121 54.331 127 43 3 23 135 20 145 8.09e-40 139
Msa1075500 MtrunA17_Chr1g0175911 50.259 193 89 4 148 336 3 192 8.34e-56 180
Msa1075500 MtrunA17_Chr1g0175911 44.785 163 76 5 1 150 1 162 2.13e-36 130
Msa1075500 MtrunA17_Chr4g0005081 52.866 157 72 2 181 336 42 197 1.49e-54 177
Msa1075500 MtrunA17_Chr4g0005081 46.087 115 52 2 29 133 33 147 4.94e-28 108
Msa1075500 MtrunA17_Chr4g0005071 52.866 157 72 2 181 336 41 196 1.90e-53 174
Msa1075500 MtrunA17_Chr4g0005071 43.609 133 64 3 29 150 32 164 4.25e-28 108
Msa1075500 MtrunA17_Chr4g0005031 51.316 152 73 1 185 336 71 221 5.06e-51 169
Msa1075500 MtrunA17_Chr4g0005031 45.378 119 55 2 42 150 71 189 1.79e-27 107
Msa1075500 MtrunA17_Chr4g0005041 50.314 159 73 4 181 336 43 198 2.00e-49 164
Msa1075500 MtrunA17_Chr4g0005041 42.373 118 60 2 29 138 34 151 1.76e-27 106
Msa1075500 MtrunA17_Chr4g0037481 52.941 153 70 2 185 336 41 192 3.32e-49 163
Msa1075500 MtrunA17_Chr4g0037481 43.333 120 57 2 42 150 41 160 5.47e-25 99.8
Msa1075500 MtrunA17_Chr4g0005011 47.458 177 79 3 160 336 35 197 3.17e-48 160
Msa1075500 MtrunA17_Chr4g0005011 41.406 128 65 2 29 146 35 162 5.18e-27 105
Msa1075500 MtrunA17_Chr3g0136641 52.288 153 70 3 186 336 37 188 8.38e-48 159
Msa1075500 MtrunA17_Chr3g0136641 41.216 148 73 5 9 145 5 149 3.17e-24 97.8
Msa1075500 MtrunA17_Chr3g0136631 50.000 154 73 3 186 336 37 189 2.04e-47 158
Msa1075500 MtrunA17_Chr3g0136631 39.716 141 72 3 18 146 13 152 8.60e-25 99.4
Msa1075500 MtrunA17_Chr7g0243501 48.023 177 80 3 160 336 28 192 2.51e-45 153
Msa1075500 MtrunA17_Chr7g0243501 42.500 160 73 6 10 150 1 160 4.86e-26 102
Msa1075500 MtrunA17_Chr5g0446751 45.763 177 74 5 165 336 30 189 1.51e-43 148
Msa1075500 MtrunA17_Chr5g0446751 40.523 153 70 7 9 145 3 150 5.79e-22 91.7
Msa1075500 MtrunA17_Chr4g0005111 46.053 152 80 2 185 336 41 190 1.59e-42 145
Msa1075500 MtrunA17_Chr4g0005111 36.170 141 80 3 19 150 19 158 5.12e-25 100
Msa1075500 MtrunA17_Chr1g0177051 45.399 163 83 4 177 335 25 185 8.52e-41 141
Msa1075500 MtrunA17_Chr1g0177051 38.889 126 65 3 33 146 24 149 1.25e-21 90.5
Msa1075500 MtrunA17_Chr4g0005131 42.568 148 83 2 190 336 45 191 3.06e-39 137
Msa1075500 MtrunA17_Chr4g0005131 35.075 134 75 3 28 150 27 159 2.47e-18 81.6
Msa1075500 MtrunA17_Chr3g0085311 48.322 149 74 2 187 335 43 188 7.46e-39 136
Msa1075500 MtrunA17_Chr3g0085311 43.636 110 55 1 44 146 43 152 3.47e-22 92.4
Msa1075500 MtrunA17_Chr3g0085291 48.322 149 72 2 187 335 43 186 1.63e-38 135
Msa1075500 MtrunA17_Chr3g0085291 43.519 108 56 1 44 146 43 150 2.03e-22 92.8
Msa1075500 MtrunA17_Chr3g0090231 46.358 151 76 4 187 336 39 185 1.94e-38 135
Msa1075500 MtrunA17_Chr3g0090231 37.415 147 80 4 11 146 3 148 2.16e-23 95.5
Msa1075500 MtrunA17_Chr4g0040551 45.695 151 77 4 187 336 39 185 1.04e-37 133
Msa1075500 MtrunA17_Chr4g0040551 37.342 158 86 5 1 150 1 153 6.47e-24 96.7
Msa1075500 MtrunA17_Chr3g0085301 44.966 149 79 2 187 335 48 193 3.45e-36 129
Msa1075500 MtrunA17_Chr3g0085301 36.364 143 80 3 14 146 16 157 1.45e-22 93.6
Msa1075500 MtrunA17_Chr3g0085321 40.698 172 86 3 164 335 33 188 1.17e-35 128
Msa1075500 MtrunA17_Chr3g0085321 37.500 112 63 2 42 146 41 152 2.61e-20 87.0
Msa1075500 MtrunA17_Chr4g0005091 38.816 152 78 1 185 336 39 175 1.68e-31 116
Msa1075500 MtrunA17_Chr4g0005091 41.667 120 57 4 25 132 20 138 1.36e-21 90.1
Msa1075500 MtrunA17_Chr4g0068381 40.397 151 89 1 186 336 31 180 1.76e-28 108
Msa1075500 MtrunA17_Chr4g0068381 37.383 107 58 1 43 140 31 137 5.94e-16 75.1
Msa1075500 MtrunA17_Chr4g0068391 38.323 167 100 2 172 336 15 180 2.64e-28 108
Msa1075500 MtrunA17_Chr4g0068391 34.579 107 61 1 43 140 31 137 7.54e-14 68.9
Msa1075500 MtrunA17_Chr4g0024961 32.215 149 100 1 183 331 26 173 8.92e-20 85.5
Msa1075500 MtrunA17_Chr4g0024951 30.822 146 100 1 186 331 29 173 2.90e-19 84.0
Msa1075500 MtrunA17_Chr1g0169511 41.053 95 54 2 220 314 133 225 3.93e-13 68.2
Msa1075500 MtrunA17_Chr1g0169281 38.947 95 56 2 220 314 139 231 4.27e-13 68.2
Msa1075500 MtrunA17_Chr1g0169291 41.053 95 54 2 220 314 133 225 5.93e-13 67.8
Msa1075500 MtrunA17_Chr1g0212861 30.688 189 108 9 166 335 169 353 1.88e-12 67.4
Msa1075500 MtrunA17_Chr4g0030731 37.383 107 66 1 213 319 177 282 4.45e-12 65.9
Msa1075500 MtrunA17_Chr4g0030681 37.383 107 66 1 213 319 178 283 4.48e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1075500 AT5G42500.1 53.595 153 68 2 183 335 36 185 6.43e-52 170
Msa1075500 AT5G42500.1 42.647 136 67 3 25 150 22 156 3.24e-30 114
Msa1075500 AT5G42510.1 51.634 153 71 2 183 335 33 182 3.27e-49 163
Msa1075500 AT5G42510.1 43.846 130 62 3 31 150 25 153 6.78e-30 113
Msa1075500 AT1G65870.1 53.548 155 67 3 183 335 38 189 3.72e-49 163
Msa1075500 AT1G65870.1 42.857 133 62 3 32 150 26 158 1.11e-26 104
Msa1075500 AT1G22900.1 51.634 153 71 2 183 335 44 193 1.30e-47 159
Msa1075500 AT1G22900.1 40.714 140 72 3 17 146 22 160 5.85e-28 108
Msa1075500 AT1G58170.1 45.625 160 86 1 177 336 27 185 1.66e-46 156
Msa1075500 AT1G58170.1 38.000 150 83 2 11 150 4 153 2.95e-25 100
Msa1075500 AT5G49040.1 46.053 152 81 1 185 336 41 191 5.22e-45 152
Msa1075500 AT5G49040.1 37.662 154 77 4 16 150 6 159 2.77e-26 103
Msa1075500 AT1G55210.1 46.711 152 77 2 185 336 40 187 2.12e-44 150
Msa1075500 AT1G55210.1 37.584 149 84 4 11 150 7 155 1.85e-26 103
Msa1075500 AT1G55210.2 46.711 152 77 2 185 336 40 187 2.12e-44 150
Msa1075500 AT1G55210.2 37.584 149 84 4 11 150 7 155 1.85e-26 103
Msa1075500 AT3G13650.1 45.161 155 81 2 182 336 36 186 1.03e-43 149
Msa1075500 AT3G13650.1 37.838 148 85 2 10 150 7 154 5.47e-28 108
Msa1075500 AT2G21100.1 43.386 189 101 3 148 335 4 187 3.59e-41 142
Msa1075500 AT2G21100.1 35.625 160 89 3 1 150 1 156 3.40e-22 92.4
Msa1075500 AT2G21100.2 43.386 189 101 3 148 335 4 187 3.59e-41 142
Msa1075500 AT2G21100.2 35.625 160 89 3 1 150 1 156 3.40e-22 92.4
Msa1075500 AT3G13662.1 48.571 140 68 2 184 323 37 172 8.37e-41 141
Msa1075500 AT3G13662.1 39.860 143 76 4 16 150 13 153 7.02e-26 102
Msa1075500 AT2G21110.1 44.371 151 79 2 190 336 37 186 3.13e-40 140
Msa1075500 AT2G21110.1 35.398 113 60 1 47 146 37 149 5.18e-19 84.0
Msa1075500 AT4G38700.1 43.038 158 85 3 184 336 33 190 1.92e-38 135
Msa1075500 AT4G38700.1 36.806 144 75 4 8 138 3 143 2.10e-22 93.2
Msa1075500 AT5G49030.3 47.692 130 67 1 185 314 41 169 1.56e-34 134
Msa1075500 AT5G49030.3 39.007 141 68 3 16 138 6 146 3.94e-23 100
Msa1075500 AT3G58090.1 54.206 107 48 1 229 335 166 271 1.65e-32 122
Msa1075500 AT3G58090.1 50.000 62 31 0 77 138 166 227 9.42e-12 65.1
Msa1075500 AT3G13660.1 44.538 119 65 1 218 336 8 125 1.88e-31 115
Msa1075500 AT3G13660.1 36.047 86 55 0 61 146 3 88 3.93e-15 71.6

Find 101 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGCCATTGTTGGCGGGAC+TGG 0.222462 7_2:+73780798 Msa1075500:CDS
TGGCCATTGTTGGCGGGACT+GGG 0.273301 7_2:+73780799 Msa1075500:CDS
TGGAAGTACACTTAGCATAT+TGG 0.334562 7_2:+73775315 Msa1075500:CDS
TGGAAGTACACTTAGCATAT+TGG 0.334562 7_2:+73780740 Msa1075500:CDS
CACAAGTTTCGAGTCACGTT+CGG 0.339547 7_2:-73775200 None:intergenic
CTTGAAAACCCAGCATTGTT+GGG 0.345342 7_2:-73775024 None:intergenic
CTTGAAAACCCAGCATTGTT+GGG 0.345342 7_2:-73780449 None:intergenic
ACAATGGCCATTTCTCTAAC+AGG 0.358166 7_2:-73780786 None:intergenic
ACAAATACCATGCTAGGTTT+TGG 0.370876 7_2:-73775097 None:intergenic
ACAAATACCATGCTAGGTTT+TGG 0.370876 7_2:-73780522 None:intergenic
GTAATACACCTAGCTAATAA+TGG 0.380631 7_2:-73780917 None:intergenic
GGAAGTACACTTAGCATATT+GGG 0.380807 7_2:+73775316 Msa1075500:CDS
GGAAGTACACTTAGCATATT+GGG 0.380807 7_2:+73780741 Msa1075500:CDS
TTCCACAATGGCATCTCCTT+TGG 0.400130 7_2:-73775452 None:intergenic
TCTTGAAAACCCAGCATTGT+TGG 0.400814 7_2:-73775025 None:intergenic
TCTTGAAAACCCAGCATTGT+TGG 0.400814 7_2:-73780450 None:intergenic
ATGGCCATTGTTGGTGGGAC+TGG 0.413384 7_2:+73775373 Msa1075500:CDS
TACTTTCACGACATTGTGTC+AGG 0.427188 7_2:+73775073 Msa1075500:CDS
TACTTTCACGACATTGTGTC+AGG 0.427188 7_2:+73780498 Msa1075500:CDS
AAGCCTATCCCCAACAATGC+TGG 0.431336 7_2:+73775015 Msa1075500:CDS
AAGCCTATCCCCAACAATGC+TGG 0.431336 7_2:+73780440 Msa1075500:intron
GGCAGTGACAAGGGATATTA+CGG 0.444661 7_2:-73774978 None:intergenic
CGTTCAGGACCAGCTGTCAA+TGG 0.445540 7_2:-73780609 None:intergenic
GTTCGGGACCAGCCGTCAAT+GGG 0.449978 7_2:-73775183 None:intergenic
GAGTGAACCTGTTAGAGAAA+TGG 0.463422 7_2:+73780779 Msa1075500:CDS
TTCACTGATGGAGATTTCAA+TGG 0.465136 7_2:+73780720 Msa1075500:CDS
ATTCGGGACGGTTGTGGCCA+TGG 0.466122 7_2:+73775156 Msa1075500:CDS
GTTAGAGAAATGGCCATTGT+TGG 0.468463 7_2:+73780789 Msa1075500:CDS
TTCTATATCACAAGAGGAGA+TGG 0.477985 7_2:+73775246 Msa1075500:CDS
TTCTATATCACAAGAGGAGA+TGG 0.477985 7_2:+73780671 Msa1075500:CDS
TTCAGTGATGGAGATTTCAA+TGG 0.482811 7_2:+73775295 Msa1075500:CDS
ACAAGTTTCGAGTCACGTTC+AGG 0.491447 7_2:-73780624 None:intergenic
ATATTACGGCGAGGAAAGTA+AGG 0.492766 7_2:-73774964 None:intergenic
ATTCGGGACGGTTGTGGCGA+TGG 0.502476 7_2:+73780581 Msa1075500:CDS
GTTGCCATTCGGGACGGTTG+TGG 0.502902 7_2:+73775150 Msa1075500:CDS
GTTGCCATTCGGGACGGTTG+TGG 0.502902 7_2:+73780575 Msa1075500:CDS
GAACGTGACTCGAAACTTGT+GGG 0.504396 7_2:+73775202 Msa1075500:CDS
ACAAGTTTCGAGTCACGTTC+GGG 0.504403 7_2:-73775199 None:intergenic
AGAGAAATGGCCATTGTTGG+CGG 0.509028 7_2:+73780792 Msa1075500:CDS
AGCCTATCCCCAACAATGCT+GGG 0.510899 7_2:+73775016 Msa1075500:CDS
AGCCTATCCCCAACAATGCT+GGG 0.510899 7_2:+73780441 Msa1075500:intron
GGCCATTGTTGGCGGGACTG+GGG 0.511798 7_2:+73780800 Msa1075500:CDS
GAGAAATGGCCATTGTTGGC+GGG 0.513679 7_2:+73780793 Msa1075500:CDS
GTATTTGTAGCTGAGCCTAA+TGG 0.523113 7_2:+73780537 Msa1075500:CDS
GAACGTGACTCGAAACTTGT+GGG 0.527774 7_2:+73780627 Msa1075500:CDS
TTATTCCGTTGATTACACTA+AGG 0.528388 7_2:+73780860 Msa1075500:CDS
AGAGGAGATGGGACTAATGA+TGG 0.528699 7_2:+73775258 Msa1075500:CDS
AGAGGAGATGGGACTAATGA+TGG 0.528699 7_2:+73780683 Msa1075500:CDS
GTTCAGGACCAGCTGTCAAT+GGG 0.530942 7_2:-73780608 None:intergenic
GTTAAAAGAAATGAGAATTG+TGG 0.531863 7_2:-73774942 None:intergenic
TATTCTGTTGATTATACCAA+AGG 0.532705 7_2:+73775436 Msa1075500:CDS
TGACTCGAAACTTGTGGGTA+AGG 0.534298 7_2:+73775207 Msa1075500:CDS
TGACTCGAAACTTGTGGGTA+AGG 0.534298 7_2:+73780632 Msa1075500:CDS
TATTCCGTTGATTACACTAA+GGG 0.535018 7_2:+73780861 Msa1075500:CDS
ATGGATGACCCATTGACGGC+TGG 0.536446 7_2:+73775175 Msa1075500:CDS
GGCCATGGATGACCCATTGA+CGG 0.539778 7_2:+73775171 Msa1075500:CDS
GTTAGAGAAATGGCCATTGT+TGG 0.545345 7_2:+73775364 Msa1075500:intron
AAACTTGTGGGTAAGGCTCA+AGG 0.545821 7_2:+73775214 Msa1075500:CDS
AAACTTGTGGGTAAGGCTCA+AGG 0.545821 7_2:+73780639 Msa1075500:CDS
ATGACCATGGCGTTCAGTGA+TGG 0.546366 7_2:+73775283 Msa1075500:CDS
AGCCGTCAATGGGTCATCCA+TGG 0.552343 7_2:-73775173 None:intergenic
TCAGCTACAAATACCATGCT+AGG 0.557255 7_2:-73775103 None:intergenic
TCAGCTACAAATACCATGCT+AGG 0.557255 7_2:-73780528 None:intergenic
TTACACTTCTATATCACAAG+AGG 0.558364 7_2:+73775240 Msa1075500:CDS
TTACACTTCTATATCACAAG+AGG 0.558364 7_2:+73780665 Msa1075500:CDS
AAATGCGTTGCCATTCGGGA+CGG 0.561926 7_2:+73775144 Msa1075500:CDS
AAATGCGTTGCCATTCGGGA+CGG 0.561926 7_2:+73780569 Msa1075500:CDS
TTGAAAACCCAGCATTGTTG+GGG 0.562104 7_2:-73775023 None:intergenic
TTGAAAACCCAGCATTGTTG+GGG 0.562104 7_2:-73780448 None:intergenic
ATGACCATGGCATTCACTGA+TGG 0.562304 7_2:+73780708 Msa1075500:CDS
AGCCCCAGTCCCGCCAACAA+TGG 0.563286 7_2:-73780802 None:intergenic
ATGGATGACCCATTGACAGC+TGG 0.564701 7_2:+73780600 Msa1075500:CDS
GTAATTAGTGGCAGTGACAA+GGG 0.567205 7_2:-73774987 None:intergenic
AGAGAAATGGCCATTGTTGG+TGG 0.569066 7_2:+73775367 Msa1075500:intron
AGTAATTAGTGGCAGTGACA+AGG 0.571016 7_2:-73774988 None:intergenic
AGCTCCAGTCCCACCAACAA+TGG 0.574074 7_2:-73775377 None:intergenic
TGAACGTGACTCGAAACTTG+TGG 0.588799 7_2:+73780626 Msa1075500:CDS
ATCGCCACAACCGTCCCGAA+TGG 0.592145 7_2:-73780579 None:intergenic
TCTATATCACAAGAGGAGAT+GGG 0.592301 7_2:+73775247 Msa1075500:CDS
TCTATATCACAAGAGGAGAT+GGG 0.592301 7_2:+73780672 Msa1075500:CDS
CACTAAGGGAGATGCCATTG+TGG 0.592766 7_2:+73780875 Msa1075500:CDS
GAGAAATGGCCATTGTTGGT+GGG 0.599344 7_2:+73775368 Msa1075500:intron
ATGGCCACAACCGTCCCGAA+TGG 0.599347 7_2:-73775154 None:intergenic
CGAACGTGACTCGAAACTTG+TGG 0.600290 7_2:+73775201 Msa1075500:CDS
ATCTCCCTTAGTGTAATCAA+CGG 0.606035 7_2:-73780865 None:intergenic
AACCCAGCATTGTTGGGGAT+AGG 0.607331 7_2:-73775018 None:intergenic
AACCCAGCATTGTTGGGGAT+AGG 0.607331 7_2:-73780443 None:intergenic
ATCTCCATCACTGAACGCCA+TGG 0.609829 7_2:-73775287 None:intergenic
GTCAGGACCAAAACCTAGCA+TGG 0.622028 7_2:+73775090 Msa1075500:CDS
GTCAGGACCAAAACCTAGCA+TGG 0.622028 7_2:+73780515 Msa1075500:CDS
TGTAGCTGAGCCTAATGGCA+AGG 0.630219 7_2:+73780542 Msa1075500:CDS
ATCTCCATCAGTGAATGCCA+TGG 0.633818 7_2:-73780712 None:intergenic
TACCAAAGGAGATGCCATTG+TGG 0.635951 7_2:+73775450 Msa1075500:CDS
TGTCGTGAAAGTAAAAGTGA+AGG 0.637192 7_2:-73775063 None:intergenic
TGTCGTGAAAGTAAAAGTGA+AGG 0.637192 7_2:-73780488 None:intergenic
GAGAATTGTGGAGCATGATG+AGG 0.646509 7_2:-73774930 None:intergenic
GAATATATCATATTCCACAA+TGG 0.672614 7_2:-73780889 None:intergenic
GAATACATCATATTCCACAA+TGG 0.695532 7_2:-73775464 None:intergenic
ACTAATGATGGTGATGACCA+TGG 0.699161 7_2:+73775270 Msa1075500:CDS
ACTAATGATGGTGATGACCA+TGG 0.702330 7_2:+73780695 Msa1075500:CDS
TGACAAGGGATATTACGGCG+AGG 0.747711 7_2:-73774973 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTATTAATTTTATT+AGG - chr7_2:73777932-73777951 None:intergenic 0.0%
!!! TTAATTATTATTATTTTTAA+CGG - chr7_2:73780079-73780098 None:intergenic 0.0%
!! AAAAATAAATATATTGAATG+TGG - chr7_2:73775614-73775633 None:intergenic 10.0%
!!! TAAAATAATTAAAAAGGTAT+TGG + chr7_2:73776973-73776992 Msa1075500:intron 10.0%
!! TTACATTAATTAGATTATTA+TGG - chr7_2:73777053-73777072 None:intergenic 10.0%
!! TTTATTAGAATATATTATTG+GGG + chr7_2:73777271-73777290 Msa1075500:intron 10.0%
!! CTTATTTAATACTAAAAAAA+TGG - chr7_2:73777810-73777829 None:intergenic 10.0%
!! CAAAATTAAATTAATAAACA+AGG + chr7_2:73778012-73778031 Msa1075500:intron 10.0%
!! TTAAAAAATTTATTTACGTT+TGG + chr7_2:73778496-73778515 Msa1075500:intron 10.0%
!!! GAATTTACTTTTTTTTTTTT+TGG - chr7_2:73778774-73778793 None:intergenic 10.0%
!! TTTATTTATCTTAATAGTTT+GGG - chr7_2:73779835-73779854 None:intergenic 10.0%
!!! TTTTATTTATCTTAATAGTT+TGG - chr7_2:73779836-73779855 None:intergenic 10.0%
!! TTTAGATATATTTCAAAATA+TGG - chr7_2:73780147-73780166 None:intergenic 10.0%
!! GATATGTAAAAAAAAATTGT+AGG - chr7_2:73776057-73776076 None:intergenic 15.0%
!!! AACTAATTGTTTTAATAGTT+TGG + chr7_2:73776212-73776231 Msa1075500:intron 15.0%
!! TTATGATTTATGTTTACTAA+TGG + chr7_2:73776321-73776340 Msa1075500:intron 15.0%
!!! AATCTTAATGGATTTAAATT+TGG + chr7_2:73776439-73776458 Msa1075500:intron 15.0%
!!! TGTCAATTATAGAAATTTTT+TGG + chr7_2:73776471-73776490 Msa1075500:intron 15.0%
!!! CTTATAGTTATAATGTTTTA+TGG - chr7_2:73776735-73776754 None:intergenic 15.0%
!! CATAAAACATTATAACTATA+AGG + chr7_2:73776733-73776752 Msa1075500:intron 15.0%
!!! TTTTTTTTTTGAGATAAACA+CGG + chr7_2:73777489-73777508 Msa1075500:intron 15.0%
!!! TTTTTTAGAAGGAATTTATT+AGG + chr7_2:73777891-73777910 Msa1075500:intron 15.0%
!!! GTAAATAAATTTTTTAAGTG+TGG - chr7_2:73778493-73778512 None:intergenic 15.0%
!!! AACAATATTTTGATTCATAA+GGG - chr7_2:73779000-73779019 None:intergenic 15.0%
!! AATCACTTATTTAACTAAAA+GGG - chr7_2:73779249-73779268 None:intergenic 15.0%
!! AAATCACTTATTTAACTAAA+AGG - chr7_2:73779250-73779269 None:intergenic 15.0%
!!! TTATATTTTGCAATCTAAAA+AGG - chr7_2:73779942-73779961 None:intergenic 15.0%
!!! GAAATATATCTAAAAGTTTT+TGG + chr7_2:73780153-73780172 Msa1075500:intron 15.0%
!! TTCAACGAAAAAAAATATGA+TGG + chr7_2:73775643-73775662 Msa1075500:intron 20.0%
!! AATAATATGATAGATACGAT+AGG + chr7_2:73776123-73776142 Msa1075500:intron 20.0%
!!! AATTGTTTTAATAGTTTGGA+AGG + chr7_2:73776216-73776235 Msa1075500:intron 20.0%
!!! TAGGGTTTTATAATGTTTTA+TGG - chr7_2:73776684-73776703 None:intergenic 20.0%
!! AATTAATAGAAACACAGTTT+AGG + chr7_2:73777464-73777483 Msa1075500:intron 20.0%
!! AAAATATTGTCAGAAAGAAA+AGG + chr7_2:73777835-73777854 Msa1075500:intron 20.0%
!!! ACAACTCAATTCTAAAATTT+TGG - chr7_2:73777981-73778000 None:intergenic 20.0%
!!! AAATTTTAGAATTGAGTTGT+TGG + chr7_2:73777981-73778000 Msa1075500:intron 20.0%
!!! TATTATTTTATTCAACAGAG+AGG - chr7_2:73778245-73778264 None:intergenic 20.0%
!!! AATGCTGGAAATTTTATAAA+CGG - chr7_2:73778276-73778295 None:intergenic 20.0%
!!! TTATTTTATTCAACAGAGAA+AGG - chr7_2:73778334-73778353 None:intergenic 20.0%
!!! AATGCTGGAAATTTTATAAA+CGG - chr7_2:73778276-73778295 None:intergenic 20.0%
!!! GTTTTTCCTTTTTTTTTTGA+GGG + chr7_2:73778578-73778597 Msa1075500:intron 20.0%
!! AATTAAATATGAGCTTGATT+TGG + chr7_2:73778666-73778685 Msa1075500:intron 20.0%
!!! CAACAATATTTTGATTCATA+AGG - chr7_2:73779001-73779020 None:intergenic 20.0%
!! CTTATGAATCAAAATATTGT+TGG + chr7_2:73778999-73779018 Msa1075500:intron 20.0%
!! AGATATATTTCAAAATATGG+TGG - chr7_2:73780144-73780163 None:intergenic 20.0%
!!! ATGAACTAAGAATGTTTTTT+TGG - chr7_2:73780311-73780330 None:intergenic 20.0%
!! AAAAGAAATTAGAAGAGTTA+TGG - chr7_2:73780367-73780386 None:intergenic 20.0%
! GTTAAAAGAAATGAGAATTG+TGG - chr7_2:73774945-73774964 None:intergenic 25.0%
!! TAGGCTTTTATAGTAATTAG+TGG - chr7_2:73775002-73775021 None:intergenic 25.0%
!! TATTCTGTTGATTATACCAA+AGG + chr7_2:73775436-73775455 Msa1075500:CDS 25.0%
! ACCTAAAGTTAAAGTCAAAT+AGG + chr7_2:73775568-73775587 Msa1075500:intron 25.0%
!! ACCTATTTGACTTTAACTTT+AGG - chr7_2:73775572-73775591 None:intergenic 25.0%
! ACATGTAAGCATATTAGAAA+AGG - chr7_2:73775669-73775688 None:intergenic 25.0%
! TTGAAATGAGTCAAACAAAA+AGG - chr7_2:73776000-73776019 None:intergenic 25.0%
! TAATGGAAAATGTTTACCTT+TGG + chr7_2:73776338-73776357 Msa1075500:intron 25.0%
! AGACGTTATAACAATCTTAA+TGG + chr7_2:73776427-73776446 Msa1075500:intron 25.0%
!! CATTTTCTGCAAATTCAATA+CGG - chr7_2:73776630-73776649 None:intergenic 25.0%
!! TTATAATGTTTTATGGTCTC+TGG - chr7_2:73776728-73776747 None:intergenic 25.0%
! TATAACTATAAGGACTTACA+AGG + chr7_2:73776743-73776762 Msa1075500:intron 25.0%
! ATAACTATAAGGACTTACAA+GGG + chr7_2:73776744-73776763 Msa1075500:intron 25.0%
!!! TTTTGTGACCTCTAAAAAAA+TGG - chr7_2:73776810-73776829 None:intergenic 25.0%
!!! TAATTAAAAAGGTATTGGCT+CGG + chr7_2:73776978-73776997 Msa1075500:intron 25.0%
! ACATAAAAAAATCTTAGGAC+CGG + chr7_2:73777002-73777021 Msa1075500:intron 25.0%
!!! ATAATTTTAGTTTCCAAAGC+CGG - chr7_2:73777024-73777043 None:intergenic 25.0%
! TTAAAGATTATTCATTGGTC+TGG - chr7_2:73777087-73777106 None:intergenic 25.0%
! ATACCATATTATATTGTTGC+AGG + chr7_2:73777345-73777364 Msa1075500:intron 25.0%
! TACCATATTATATTGTTGCA+GGG + chr7_2:73777346-73777365 Msa1075500:intron 25.0%
!! CTTCACCTCTAAAAAAAAAT+CGG + chr7_2:73777668-73777687 Msa1075500:intron 25.0%
!!! TTGAACCGATTTTTTTTTAG+AGG - chr7_2:73777676-73777695 None:intergenic 25.0%
! CAATAGAATAGGAATGAAAT+TGG + chr7_2:73777858-73777877 Msa1075500:intron 25.0%
!! ATGCTGGAAATTTTATAAAC+GGG - chr7_2:73778275-73778294 None:intergenic 25.0%
!! AGCATTTTGAATTTGAATGA+CGG + chr7_2:73778290-73778309 Msa1075500:intron 25.0%
!! ATGCTGGAAATTTTATAAAC+GGG - chr7_2:73778275-73778294 None:intergenic 25.0%
! GAGTGAAAAAGATGTTTAAA+AGG - chr7_2:73778424-73778443 None:intergenic 25.0%
! CATAAAAAATGTGTGGTATT+TGG + chr7_2:73778521-73778540 Msa1075500:intron 25.0%
!!! TCTTCCTTCTTTTTTTTTTG+AGG + chr7_2:73778554-73778573 Msa1075500:intron 25.0%
!!! CTTCCTTCTTTTTTTTTTGA+GGG + chr7_2:73778555-73778574 Msa1075500:intron 25.0%
!!! TTCCTTCTTTTTTTTTTGAG+GGG + chr7_2:73778556-73778575 Msa1075500:intron 25.0%
!!! GGTTTTTCCTTTTTTTTTTG+AGG + chr7_2:73778577-73778596 Msa1075500:intron 25.0%
! TTCAAACCCTCAAAAAAAAA+AGG - chr7_2:73778587-73778606 None:intergenic 25.0%
! TTTAGCGAAAAATATGAACT+TGG + chr7_2:73778630-73778649 Msa1075500:intron 25.0%
! AAAATTCGATCACTAAACAA+AGG - chr7_2:73778919-73778938 None:intergenic 25.0%
!! GATATTTGATTCGTTTGTAT+CGG - chr7_2:73778944-73778963 None:intergenic 25.0%
! GAAGAACAAAAAAAAGTTGA+CGG - chr7_2:73779116-73779135 None:intergenic 25.0%
! ACTTATTTAACTAAAAGGGA+AGG - chr7_2:73779245-73779264 None:intergenic 25.0%
! CCATGTTAATAGCATAAAAT+AGG - chr7_2:73779478-73779497 None:intergenic 25.0%
!! CCTATTTTATGCTATTAACA+TGG + chr7_2:73779475-73779494 Msa1075500:intron 25.0%
!! GGTTTCTTTTTATTCACTTA+AGG + chr7_2:73779508-73779527 Msa1075500:intron 25.0%
!! TTTTTATTCACTTAAGGAGT+AGG + chr7_2:73779514-73779533 Msa1075500:intron 25.0%
!! TAGAGATTTGAAATTGAACA+TGG + chr7_2:73779539-73779558 Msa1075500:intron 25.0%
!! AGAGATTTGAAATTGAACAT+GGG + chr7_2:73779540-73779559 Msa1075500:intron 25.0%
!!! TATATTTTTTTTCCTGAGTC+AGG + chr7_2:73779752-73779771 Msa1075500:intron 25.0%
!!! ATATTTTTTTTCCTGAGTCA+GGG + chr7_2:73779753-73779772 Msa1075500:intron 25.0%
! TATGCATGCCTATTTATAAT+AGG - chr7_2:73780243-73780262 None:intergenic 25.0%
!!! TTTTTGGTTGTTATTGTTTG+AGG - chr7_2:73780295-73780314 None:intergenic 25.0%
!! TAGGCTTTTATAGTAATTAG+TGG - chr7_2:73775002-73775021 None:intergenic 25.0%
! GAATATATCATATTCCACAA+TGG - chr7_2:73780892-73780911 None:intergenic 25.0%
TTACACTTCTATATCACAAG+AGG + chr7_2:73775240-73775259 Msa1075500:CDS 30.0%
GAATACATCATATTCCACAA+TGG - chr7_2:73775467-73775486 None:intergenic 30.0%
TTCGTATTCCATTATTAGCT+AGG + chr7_2:73775484-73775503 Msa1075500:intron 30.0%
AAACTACACCTAGCTAATAA+TGG - chr7_2:73775495-73775514 None:intergenic 30.0%
ATTGTCCAGTTAACAATTCA+AGG + chr7_2:73775703-73775722 Msa1075500:intron 30.0%
TTGTCCAGTTAACAATTCAA+GGG + chr7_2:73775704-73775723 Msa1075500:intron 30.0%
TTTACCCTTGAATTGTTAAC+TGG - chr7_2:73775711-73775730 None:intergenic 30.0%
!!! TTAGTGGGTTTAGGATTTTA+GGG - chr7_2:73775754-73775773 None:intergenic 30.0%
!!! ATTGATGGTGAATGTTTTGA+AGG - chr7_2:73775854-73775873 None:intergenic 30.0%
AATTGATCATGCTGAATCTA+TGG - chr7_2:73775879-73775898 None:intergenic 30.0%
!! TACTAAAAAAAGAGCGTCTA+TGG - chr7_2:73776266-73776285 None:intergenic 30.0%
! TGTTTACCTTTGGATCATTT+TGG + chr7_2:73776348-73776367 Msa1075500:intron 30.0%
! GTTTACCTTTGGATCATTTT+GGG + chr7_2:73776349-73776368 Msa1075500:intron 30.0%
! AGACACATCTAATAGTTTGT+TGG + chr7_2:73776383-73776402 Msa1075500:intron 30.0%
! AATGTTTTATGGTCTAGTGT+TGG - chr7_2:73776673-73776692 None:intergenic 30.0%
AAACCCTAATTTCAGAACAA+AGG + chr7_2:73776696-73776715 Msa1075500:intron 30.0%
AACCCTAATTTCAGAACAAA+GGG + chr7_2:73776697-73776716 Msa1075500:intron 30.0%
ATTTATACCGTTCATGCTAA+GGG - chr7_2:73776773-73776792 None:intergenic 30.0%
!! AATTAAAAAGGTATTGGCTC+GGG + chr7_2:73776979-73776998 Msa1075500:intron 30.0%
TCGGGACATAAAAAAATCTT+AGG + chr7_2:73776997-73777016 Msa1075500:intron 30.0%
! ACGGGTTAAAGATTATTCAT+TGG - chr7_2:73777092-73777111 None:intergenic 30.0%
! TAAGATTGAAGTGTCATTGA+AGG - chr7_2:73777196-73777215 None:intergenic 30.0%
ACCATATTATATTGTTGCAG+GGG + chr7_2:73777347-73777366 Msa1075500:intron 30.0%
!!! TTTTGAGATAAACACGGTTT+AGG + chr7_2:73777495-73777514 Msa1075500:intron 30.0%
! TTTGAGATAAACACGGTTTA+GGG + chr7_2:73777496-73777515 Msa1075500:intron 30.0%
AGATGTGTAACACTATAACT+TGG + chr7_2:73777724-73777743 Msa1075500:intron 30.0%
ACACTATAACTTGGAGAATA+AGG + chr7_2:73777733-73777752 Msa1075500:intron 30.0%
GAAAGAAAAGGCAATAGAAT+AGG + chr7_2:73777847-73777866 Msa1075500:intron 30.0%
TAGAATAGGAATGAAATTGG+TGG + chr7_2:73777861-73777880 Msa1075500:intron 30.0%
AGAATAGGAATGAAATTGGT+GGG + chr7_2:73777862-73777881 Msa1075500:intron 30.0%
GTCATTCAAATTCAAAATGC+TGG - chr7_2:73778291-73778310 None:intergenic 30.0%
CAGCATTTGAATTTGAATGA+CGG + chr7_2:73778380-73778399 Msa1075500:intron 30.0%
! TTTGGCTCATAAAAAATGTG+TGG + chr7_2:73778514-73778533 Msa1075500:intron 30.0%
AACCCCTCAAAAAAAAAAGA+AGG - chr7_2:73778561-73778580 None:intergenic 30.0%
ATATCAAACATTTGACCACT+TGG + chr7_2:73778959-73778978 Msa1075500:intron 30.0%
AAAGGGAAGGAAAAAGATTT+CGG - chr7_2:73779232-73779251 None:intergenic 30.0%
AATAAAGACTGCACTAAGAT+GGG - chr7_2:73779376-73779395 None:intergenic 30.0%
AAATAAAGACTGCACTAAGA+TGG - chr7_2:73779377-73779396 None:intergenic 30.0%
! GCAGATCCATTCAATTATTT+TGG + chr7_2:73779429-73779448 Msa1075500:intron 30.0%
TCGAAGCCAAAATAATTGAA+TGG - chr7_2:73779438-73779457 None:intergenic 30.0%
CTATTAACATGGATAATGTG+CGG + chr7_2:73779486-73779505 Msa1075500:intron 30.0%
TATTAACATGGATAATGTGC+GGG + chr7_2:73779487-73779506 Msa1075500:intron 30.0%
! ATATGATGAGGCATATTTTC+AGG - chr7_2:73779639-73779658 None:intergenic 30.0%
!!! AAGTTGAGCTGACATTTTTT+TGG - chr7_2:73779674-73779693 None:intergenic 30.0%
TATAACGTCAGTGACTAAAA+TGG + chr7_2:73779700-73779719 Msa1075500:intron 30.0%
!!! TCATTTTGGTTTTGACATCT+TGG - chr7_2:73780049-73780068 None:intergenic 30.0%
! TTAACGGGAAACTATCATTT+TGG - chr7_2:73780063-73780082 None:intergenic 30.0%
TGCCTATTTATAATAGGTGT+GGG - chr7_2:73780237-73780256 None:intergenic 30.0%
ATGCCTATTTATAATAGGTG+TGG - chr7_2:73780238-73780257 None:intergenic 30.0%
AGAAATTAGAAGAGTTATGG+AGG - chr7_2:73780364-73780383 None:intergenic 30.0%
ATATTATGGAGAGGAATGTA+AGG - chr7_2:73780392-73780411 None:intergenic 30.0%
TTACACTTCTATATCACAAG+AGG + chr7_2:73775240-73775259 Msa1075500:CDS 30.0%
! TTATTCCGTTGATTACACTA+AGG + chr7_2:73780860-73780879 Msa1075500:CDS 30.0%
! TATTCCGTTGATTACACTAA+GGG + chr7_2:73780861-73780880 Msa1075500:CDS 30.0%
TGTCGTGAAAGTAAAAGTGA+AGG - chr7_2:73775066-73775085 None:intergenic 35.0%
! ACAAATACCATGCTAGGTTT+TGG - chr7_2:73775100-73775119 None:intergenic 35.0%
!!! GCATTTTTTACCTTGCCATT+GGG - chr7_2:73775130-73775149 None:intergenic 35.0%
GTAAAAAATGCGTTGCCATT+CGG + chr7_2:73775139-73775158 Msa1075500:CDS 35.0%
TAAAAAATGCGTTGCCATTC+GGG + chr7_2:73775140-73775159 Msa1075500:CDS 35.0%
TTCTATATCACAAGAGGAGA+TGG + chr7_2:73775246-73775265 Msa1075500:CDS 35.0%
TCTATATCACAAGAGGAGAT+GGG + chr7_2:73775247-73775266 Msa1075500:CDS 35.0%
! TTCAGTGATGGAGATTTCAA+TGG + chr7_2:73775295-73775314 Msa1075500:CDS 35.0%
! TGGAAGTACACTTAGCATAT+TGG + chr7_2:73775315-73775334 Msa1075500:CDS 35.0%
! GGAAGTACACTTAGCATATT+GGG + chr7_2:73775316-73775335 Msa1075500:CDS 35.0%
!!! TTAGGATTTTAGGGTGATAG+AGG - chr7_2:73775745-73775764 None:intergenic 35.0%
!!! GTTAGTGGGTTTAGGATTTT+AGG - chr7_2:73775755-73775774 None:intergenic 35.0%
GACTAATGTCATGAGTTAGT+GGG - chr7_2:73775769-73775788 None:intergenic 35.0%
GCTGAATCTATGGAAATTGA+TGG - chr7_2:73775869-73775888 None:intergenic 35.0%
ACCCTAATTTCAGAACAAAG+GGG + chr7_2:73776698-73776717 Msa1075500:intron 35.0%
!! ACCCCTTTGTTCTGAAATTA+GGG - chr7_2:73776702-73776721 None:intergenic 35.0%
CATTTATACCGTTCATGCTA+AGG - chr7_2:73776774-73776793 None:intergenic 35.0%
!! CTCTAAAAAAATGGTGCCAT+GGG - chr7_2:73776801-73776820 None:intergenic 35.0%
ATCTTTAACCCGTAAGATCA+TGG + chr7_2:73777099-73777118 Msa1075500:intron 35.0%
TCTTTAACCCGTAAGATCAT+GGG + chr7_2:73777100-73777119 Msa1075500:intron 35.0%
ACCCCTGCAACAATATAATA+TGG - chr7_2:73777351-73777370 None:intergenic 35.0%
TATATACAGTCGAGTTTGCA+TGG + chr7_2:73777524-73777543 Msa1075500:intron 35.0%
TCGAGTTTGCATGGAAATTA+GGG + chr7_2:73777533-73777552 Msa1075500:intron 35.0%
! CCCTAATTTTCATGCAAACT+CGG - chr7_2:73777562-73777581 None:intergenic 35.0%
CCGAGTTTGCATGAAAATTA+GGG + chr7_2:73777559-73777578 Msa1075500:intron 35.0%
! GTGAGAGCGTAAAAAAAGAA+AGG + chr7_2:73777755-73777774 Msa1075500:intron 35.0%
!!! GTGGGATGCATTTTTTTAGA+AGG + chr7_2:73777880-73777899 Msa1075500:intron 35.0%
!! TACCGACTCTTCTATTCTAA+TGG + chr7_2:73778036-73778055 Msa1075500:intron 35.0%
CACCATTAGAATAGAAGAGT+CGG - chr7_2:73778041-73778060 None:intergenic 35.0%
TGCTATTATTGCTAGGATTG+TGG - chr7_2:73778132-73778151 None:intergenic 35.0%
! GGAAATTTTATAAACGGGAG+AGG - chr7_2:73778270-73778289 None:intergenic 35.0%
! GGAAATTTTATAAACGGGAG+AGG - chr7_2:73778270-73778289 None:intergenic 35.0%
CGTCATTCAAATTCAAATGC+TGG - chr7_2:73778382-73778401 None:intergenic 35.0%
!! GTTGGCTCATATTTTCTTCA+TGG - chr7_2:73778446-73778465 None:intergenic 35.0%
TCATTTGCACCTCTAGATAT+GGG - chr7_2:73778468-73778487 None:intergenic 35.0%
ATCATTTGCACCTCTAGATA+TGG - chr7_2:73778469-73778488 None:intergenic 35.0%
GAAACTTCGTTCTTAGGATA+TGG - chr7_2:73778894-73778913 None:intergenic 35.0%
AAGGTAGAAACTTCGTTCTT+AGG - chr7_2:73778900-73778919 None:intergenic 35.0%
ACTTGAACGAATTAACCAAG+TGG - chr7_2:73778977-73778996 None:intergenic 35.0%
AAGAAGAAGAAAGATGGTGA+CGG - chr7_2:73779158-73779177 None:intergenic 35.0%
GTAGACAAGAAGAAGAAAGA+TGG - chr7_2:73779164-73779183 None:intergenic 35.0%
! GTGCAGTCTTTATTTGATTC+AGG + chr7_2:73779382-73779401 Msa1075500:intron 35.0%
CTGACAAGAATGATATGATG+AGG - chr7_2:73779651-73779670 None:intergenic 35.0%
TCAGTGACTAAAATGGCTAA+CGG + chr7_2:73779707-73779726 Msa1075500:intron 35.0%
TAATGTGCTTACAACACATC+CGG - chr7_2:73779790-73779809 None:intergenic 35.0%
AACAACGCTTAACATGTTTC+TGG + chr7_2:73780104-73780123 Msa1075500:intron 35.0%
ATTTATAATAGGTGTGGGTG+TGG - chr7_2:73780232-73780251 None:intergenic 35.0%
CACCCACACCTATTATAAAT+AGG + chr7_2:73780232-73780251 Msa1075500:intron 35.0%
TGTCGTGAAAGTAAAAGTGA+AGG - chr7_2:73775066-73775085 None:intergenic 35.0%
! ACAAATACCATGCTAGGTTT+TGG - chr7_2:73775100-73775119 None:intergenic 35.0%
!!! GCATTTTTTACCTTGCCATT+AGG - chr7_2:73775130-73775149 None:intergenic 35.0%
GTAAAAAATGCGTTGCCATT+CGG + chr7_2:73775139-73775158 Msa1075500:CDS 35.0%
TAAAAAATGCGTTGCCATTC+GGG + chr7_2:73775140-73775159 Msa1075500:CDS 35.0%
TTCTATATCACAAGAGGAGA+TGG + chr7_2:73775246-73775265 Msa1075500:CDS 35.0%
TCTATATCACAAGAGGAGAT+GGG + chr7_2:73775247-73775266 Msa1075500:CDS 35.0%
TTCACTGATGGAGATTTCAA+TGG + chr7_2:73780720-73780739 Msa1075500:CDS 35.0%
! TGGAAGTACACTTAGCATAT+TGG + chr7_2:73775315-73775334 Msa1075500:CDS 35.0%
! GGAAGTACACTTAGCATATT+GGG + chr7_2:73775316-73775335 Msa1075500:CDS 35.0%
ATCTCCCTTAGTGTAATCAA+CGG - chr7_2:73780868-73780887 None:intergenic 35.0%
ATATTACGGCGAGGAAAGTA+AGG - chr7_2:73774967-73774986 None:intergenic 40.0%
GTAATTAGTGGCAGTGACAA+GGG - chr7_2:73774990-73775009 None:intergenic 40.0%
AGTAATTAGTGGCAGTGACA+AGG - chr7_2:73774991-73775010 None:intergenic 40.0%
TTGAAAACCCAGCATTGTTG+GGG - chr7_2:73775026-73775045 None:intergenic 40.0%
CTTGAAAACCCAGCATTGTT+GGG - chr7_2:73775027-73775046 None:intergenic 40.0%
TCTTGAAAACCCAGCATTGT+TGG - chr7_2:73775028-73775047 None:intergenic 40.0%
TACTTTCACGACATTGTGTC+AGG + chr7_2:73775073-73775092 Msa1075500:CDS 40.0%
TCAGCTACAAATACCATGCT+AGG - chr7_2:73775106-73775125 None:intergenic 40.0%
!!! CGCATTTTTTACCTTGCCAT+TGG - chr7_2:73775131-73775150 None:intergenic 40.0%
! ACTAATGATGGTGATGACCA+TGG + chr7_2:73775270-73775289 Msa1075500:CDS 40.0%
GAGTGAACCTGTTAGAGAAA+TGG + chr7_2:73775354-73775373 Msa1075500:intron 40.0%
ACAATGGCCATTTCTCTAAC+AGG - chr7_2:73775364-73775383 None:intergenic 40.0%
GTTAGAGAAATGGCCATTGT+TGG + chr7_2:73775364-73775383 Msa1075500:intron 40.0%
! ACTTTAGGTGAGAGTGTAAC+AGG - chr7_2:73775557-73775576 None:intergenic 40.0%
!! ATGCTTACATGTGTCACTTG+AGG + chr7_2:73775677-73775696 Msa1075500:intron 40.0%
!! TGTCATGAGTTAGTGGGTTT+AGG - chr7_2:73775763-73775782 None:intergenic 40.0%
GGACTAATGTCATGAGTTAG+TGG - chr7_2:73775770-73775789 None:intergenic 40.0%
CTAACTCATGACATTAGTCC+AGG + chr7_2:73775770-73775789 Msa1075500:intron 40.0%
TTATTGTCCAAACCCTTCTC+TGG + chr7_2:73775798-73775817 Msa1075500:intron 40.0%
CAGTATTCTTCTCCAGAGAA+GGG - chr7_2:73775813-73775832 None:intergenic 40.0%
! TACCTTTGGATCATTTTGGG+TGG + chr7_2:73776352-73776371 Msa1075500:intron 40.0%
AACCACCCAAAATGATCCAA+AGG - chr7_2:73776357-73776376 None:intergenic 40.0%
!! CACCCCTTTGTTCTGAAATT+AGG - chr7_2:73776703-73776722 None:intergenic 40.0%
ACTATAAGGACTTACAAGGG+TGG + chr7_2:73776747-73776766 Msa1075500:intron 40.0%
!! TAAAAAAATGGTGCCATGGG+CGG - chr7_2:73776798-73776817 None:intergenic 40.0%
! CCTCTAAAAAAATGGTGCCA+TGG - chr7_2:73776802-73776821 None:intergenic 40.0%
!!! CCATGGCACCATTTTTTTAG+AGG + chr7_2:73776799-73776818 Msa1075500:intron 40.0%
! AAAAATCTTAGGACCGGCTT+TGG + chr7_2:73777008-73777027 Msa1075500:intron 40.0%
TTGATCGACCCATGATCTTA+CGG - chr7_2:73777111-73777130 None:intergenic 40.0%
GTCGAGTTTGCATGGAAATT+AGG + chr7_2:73777532-73777551 Msa1075500:intron 40.0%
GCCGAGTTTGCATGAAAATT+AGG + chr7_2:73777558-73777577 Msa1075500:intron 40.0%
TTCTTCTTGTCTACCGAATG+AGG + chr7_2:73779170-73779189 Msa1075500:intron 40.0%
TCTTCTTGTCTACCGAATGA+GGG + chr7_2:73779171-73779190 Msa1075500:intron 40.0%
GAACTTGAATCACCCTCATT+CGG - chr7_2:73779186-73779205 None:intergenic 40.0%
TGAACATGGGAGTGATGAAT+TGG + chr7_2:73779553-73779572 Msa1075500:intron 40.0%
GAACATGGGAGTGATGAATT+GGG + chr7_2:73779554-73779573 Msa1075500:intron 40.0%
TCATTAATAGTCCCTGACTC+AGG - chr7_2:73779767-73779786 None:intergenic 40.0%
AGTCAGGGACTATTAATGAC+CGG + chr7_2:73779768-73779787 Msa1075500:intron 40.0%
GGATGTGTTGTAAGCACATT+AGG + chr7_2:73779789-73779808 Msa1075500:intron 40.0%
CGTCAAGAACCAATAGTGTT+AGG + chr7_2:73780020-73780039 Msa1075500:intron 40.0%
TCTTGGCTTCCTAACACTAT+TGG - chr7_2:73780032-73780051 None:intergenic 40.0%
TAGTTCATTCGCATCAACCA+TGG + chr7_2:73780323-73780342 Msa1075500:intron 40.0%
! GGATTGTGAAGATTTTGCCA+TGG - chr7_2:73780343-73780362 None:intergenic 40.0%
TGACAAGGGATATTATGGAG+AGG - chr7_2:73780401-73780420 None:intergenic 40.0%
GTAATTAGTGGCAGTGACAA+GGG - chr7_2:73774990-73775009 None:intergenic 40.0%
AGTAATTAGTGGCAGTGACA+AGG - chr7_2:73774991-73775010 None:intergenic 40.0%
TTGAAAACCCAGCATTGTTG+GGG - chr7_2:73775026-73775045 None:intergenic 40.0%
CTTGAAAACCCAGCATTGTT+GGG - chr7_2:73775027-73775046 None:intergenic 40.0%
TCTTGAAAACCCAGCATTGT+TGG - chr7_2:73775028-73775047 None:intergenic 40.0%
TACTTTCACGACATTGTGTC+AGG + chr7_2:73775073-73775092 Msa1075500:CDS 40.0%
TCAGCTACAAATACCATGCT+AGG - chr7_2:73775106-73775125 None:intergenic 40.0%
GTATTTGTAGCTGAGCCTAA+TGG + chr7_2:73780537-73780556 Msa1075500:CDS 40.0%
! ACTAATGATGGTGATGACCA+TGG + chr7_2:73775270-73775289 Msa1075500:CDS 40.0%
GAGTGAACCTGTTAGAGAAA+TGG + chr7_2:73775354-73775373 Msa1075500:intron 40.0%
ACAATGGCCATTTCTCTAAC+AGG - chr7_2:73775364-73775383 None:intergenic 40.0%
GTTAGAGAAATGGCCATTGT+TGG + chr7_2:73775364-73775383 Msa1075500:intron 40.0%
GAGAATTGTGGAGCATGATG+AGG - chr7_2:73774933-73774952 None:intergenic 45.0%
GGCAGTGACAAGGGATATTA+CGG - chr7_2:73774981-73775000 None:intergenic 45.0%
GTATTTGTAGCTGAGCCCAA+TGG + chr7_2:73775112-73775131 Msa1075500:intron 45.0%
! ACAAGTTTCGAGTCACGTTC+GGG - chr7_2:73775202-73775221 None:intergenic 45.0%
! CACAAGTTTCGAGTCACGTT+CGG - chr7_2:73775203-73775222 None:intergenic 45.0%
GAACGTGACTCGAAACTTGT+GGG + chr7_2:73775202-73775221 Msa1075500:CDS 45.0%
TGACTCGAAACTTGTGGGTA+AGG + chr7_2:73775207-73775226 Msa1075500:CDS 45.0%
AAACTTGTGGGTAAGGCTCA+AGG + chr7_2:73775214-73775233 Msa1075500:CDS 45.0%
AGAGGAGATGGGACTAATGA+TGG + chr7_2:73775258-73775277 Msa1075500:CDS 45.0%
AGAGAAATGGCCATTGTTGG+TGG + chr7_2:73775367-73775386 Msa1075500:intron 45.0%
GAGAAATGGCCATTGTTGGT+GGG + chr7_2:73775368-73775387 Msa1075500:intron 45.0%
TACCAAAGGAGATGCCATTG+TGG + chr7_2:73775450-73775469 Msa1075500:CDS 45.0%
TTCCACAATGGCATCTCCTT+TGG - chr7_2:73775455-73775474 None:intergenic 45.0%
AGGGTGATAGAGGAGGTTTA+GGG - chr7_2:73775735-73775754 None:intergenic 45.0%
TAGGGTGATAGAGGAGGTTT+AGG - chr7_2:73775736-73775755 None:intergenic 45.0%
!!! GGATTTTAGGGTGATAGAGG+AGG - chr7_2:73775742-73775761 None:intergenic 45.0%
GTTTGGACAATAAGCGTACC+TGG - chr7_2:73775791-73775810 None:intergenic 45.0%
TTCTTCTCCAGAGAAGGGTT+TGG - chr7_2:73775808-73775827 None:intergenic 45.0%
GCAGTATTCTTCTCCAGAGA+AGG - chr7_2:73775814-73775833 None:intergenic 45.0%
! AGAGCGTCTATGGTTGAACT+AGG - chr7_2:73776256-73776275 None:intergenic 45.0%
TGATCGACCCATGATCTTAC+GGG - chr7_2:73777110-73777129 None:intergenic 45.0%
! CTTCTTTGAGTTCTGTCACG+TGG + chr7_2:73778094-73778113 Msa1075500:intron 45.0%
TAGGATTGTGGCTCGTACAT+TGG - chr7_2:73778120-73778139 None:intergenic 45.0%
TGGAGGCTGCTATTATTGCT+AGG - chr7_2:73778139-73778158 None:intergenic 45.0%
TAATAGCAGCCTCCAACGAA+CGG + chr7_2:73778144-73778163 Msa1075500:intron 45.0%
! TAGCTAGCTTCCAGTGTGAT+GGG - chr7_2:73778216-73778235 None:intergenic 45.0%
! TTAGCTAGCTTCCAGTGTGA+TGG - chr7_2:73778217-73778236 None:intergenic 45.0%
ATGAGCCAACCCATATCTAG+AGG + chr7_2:73778456-73778475 Msa1075500:intron 45.0%
TTGCACCTCTAGATATGGGT+TGG - chr7_2:73778464-73778483 None:intergenic 45.0%
!! AAGAAAGATGGTGACGGCTA+GGG - chr7_2:73779152-73779171 None:intergenic 45.0%
GATTTCGGAGGAGTGAGTTA+GGG - chr7_2:73779217-73779236 None:intergenic 45.0%
AGATTTCGGAGGAGTGAGTT+AGG - chr7_2:73779218-73779237 None:intergenic 45.0%
GGGAAGGAAAAAGATTTCGG+AGG - chr7_2:73779229-73779248 None:intergenic 45.0%
GGCAGTGACAAGGGATATTA+TGG - chr7_2:73774981-73775000 None:intergenic 45.0%
! ACAAGTTTCGAGTCACGTTC+AGG - chr7_2:73775202-73775221 None:intergenic 45.0%
TGAACGTGACTCGAAACTTG+TGG + chr7_2:73780626-73780645 Msa1075500:CDS 45.0%
GAACGTGACTCGAAACTTGT+GGG + chr7_2:73775202-73775221 Msa1075500:CDS 45.0%
TGACTCGAAACTTGTGGGTA+AGG + chr7_2:73775207-73775226 Msa1075500:CDS 45.0%
AAACTTGTGGGTAAGGCTCA+AGG + chr7_2:73775214-73775233 Msa1075500:CDS 45.0%
AGAGGAGATGGGACTAATGA+TGG + chr7_2:73775258-73775277 Msa1075500:CDS 45.0%
ATGACCATGGCATTCACTGA+TGG + chr7_2:73780708-73780727 Msa1075500:CDS 45.0%
ATCTCCATCAGTGAATGCCA+TGG - chr7_2:73780715-73780734 None:intergenic 45.0%
AGAGAAATGGCCATTGTTGG+CGG + chr7_2:73775367-73775386 Msa1075500:intron 45.0%
! GGGCTTTTCGTTTTGTACGT+GGG + chr7_2:73780820-73780839 Msa1075500:CDS 45.0%
!!! AACATTTAAAATAATTAAAA+AGG + chr7_2:73776967-73776986 Msa1075500:intron 5.0%
!!! ATTTTATTAGAATATATTAT+TGG + chr7_2:73777269-73777288 Msa1075500:intron 5.0%
!!! TTTTATTAGAATATATTATT+GGG + chr7_2:73777270-73777289 Msa1075500:intron 5.0%
!!! ATATATATCAATTTTTTTAT+AGG + chr7_2:73778865-73778884 Msa1075500:intron 5.0%
!!! TAATTATTATTATTTTTAAC+GGG - chr7_2:73780078-73780097 None:intergenic 5.0%
TGACAAGGGATATTACGGCG+AGG - chr7_2:73774976-73774995 None:intergenic 50.0%
AAGCCTATCCCCAACAATGC+TGG + chr7_2:73775015-73775034 Msa1075500:CDS 50.0%
AGCCTATCCCCAACAATGCT+GGG + chr7_2:73775016-73775035 Msa1075500:CDS 50.0%
AACCCAGCATTGTTGGGGAT+AGG - chr7_2:73775021-73775040 None:intergenic 50.0%
GTCAGGACCAAAACCTAGCA+TGG + chr7_2:73775090-73775109 Msa1075500:CDS 50.0%
AAATGCGTTGCCATTCGGGA+CGG + chr7_2:73775144-73775163 Msa1075500:CDS 50.0%
CGAACGTGACTCGAAACTTG+TGG + chr7_2:73775201-73775220 Msa1075500:CDS 50.0%
ATGACCATGGCGTTCAGTGA+TGG + chr7_2:73775283-73775302 Msa1075500:CDS 50.0%
ATCTCCATCACTGAACGCCA+TGG - chr7_2:73775290-73775309 None:intergenic 50.0%
! GGAGCTTTTCGTTTCGTACG+TGG + chr7_2:73775394-73775413 Msa1075500:CDS 50.0%
ACGGTATAAATGTCCGCCCA+TGG + chr7_2:73776782-73776801 Msa1075500:intron 50.0%
CTAACTGCTAAGCCGTTCGT+TGG - chr7_2:73778159-73778178 None:intergenic 50.0%
! AGCTAGCTTCCAGTGTGATG+GGG - chr7_2:73778215-73778234 None:intergenic 50.0%
!! GAAGAAAGATGGTGACGGCT+AGG - chr7_2:73779153-73779172 None:intergenic 50.0%
TTGGCTTCGAGCAAGTGCAT+TGG + chr7_2:73779448-73779467 Msa1075500:intron 50.0%
AAGCCTATCCCCAACAATGC+TGG + chr7_2:73775015-73775034 Msa1075500:CDS 50.0%
AGCCTATCCCCAACAATGCT+GGG + chr7_2:73775016-73775035 Msa1075500:CDS 50.0%
AACCCAGCATTGTTGGGGAT+AGG - chr7_2:73775021-73775040 None:intergenic 50.0%
GTCAGGACCAAAACCTAGCA+TGG + chr7_2:73775090-73775109 Msa1075500:CDS 50.0%
TGTAGCTGAGCCTAATGGCA+AGG + chr7_2:73780542-73780561 Msa1075500:CDS 50.0%
AAATGCGTTGCCATTCGGGA+CGG + chr7_2:73775144-73775163 Msa1075500:CDS 50.0%
ATGGATGACCCATTGACAGC+TGG + chr7_2:73780600-73780619 Msa1075500:CDS 50.0%
GTTCAGGACCAGCTGTCAAT+GGG - chr7_2:73780611-73780630 None:intergenic 50.0%
GAGAAATGGCCATTGTTGGC+GGG + chr7_2:73780793-73780812 Msa1075500:CDS 50.0%
! GGGGCTTTTCGTTTTGTACG+TGG + chr7_2:73780819-73780838 Msa1075500:CDS 50.0%
CACTAAGGGAGATGCCATTG+TGG + chr7_2:73780875-73780894 Msa1075500:CDS 50.0%
TGTAGCTGAGCCCAATGGCA+AGG + chr7_2:73775117-73775136 Msa1075500:intron 55.0%
GGCCATGGATGACCCATTGA+CGG + chr7_2:73775171-73775190 Msa1075500:CDS 55.0%
AGCCGTCAATGGGTCATCCA+TGG - chr7_2:73775176-73775195 None:intergenic 55.0%
ATGGATGACCCATTGACGGC+TGG + chr7_2:73775175-73775194 Msa1075500:CDS 55.0%
! ATGGCCATTGTTGGTGGGAC+TGG + chr7_2:73775373-73775392 Msa1075500:CDS 55.0%
AGCTCCAGTCCCACCAACAA+TGG - chr7_2:73775380-73775399 None:intergenic 55.0%
AGGGTGGCCCTTAGCATGAA+CGG + chr7_2:73776763-73776782 Msa1075500:intron 55.0%
ACTGCTAAGCCGTTCGTTGG+AGG - chr7_2:73778156-73778175 None:intergenic 55.0%
TCCTACACACCCCATCACAC+TGG + chr7_2:73778203-73778222 Msa1075500:intron 55.0%
! TCCAGTGTGATGGGGTGTGT+AGG - chr7_2:73778207-73778226 None:intergenic 55.0%
CGTTCAGGACCAGCTGTCAA+TGG - chr7_2:73780612-73780631 None:intergenic 55.0%
GTTGCCATTCGGGACGGTTG+TGG + chr7_2:73775150-73775169 Msa1075500:CDS 60.0%
ATGGCCACAACCGTCCCGAA+TGG - chr7_2:73775157-73775176 None:intergenic 60.0%
ATTCGGGACGGTTGTGGCCA+TGG + chr7_2:73775156-73775175 Msa1075500:CDS 60.0%
GTTCGGGACCAGCCGTCAAT+GGG - chr7_2:73775186-73775205 None:intergenic 60.0%
GTTGCCATTCGGGACGGTTG+TGG + chr7_2:73775150-73775169 Msa1075500:CDS 60.0%
ATCGCCACAACCGTCCCGAA+TGG - chr7_2:73780582-73780601 None:intergenic 60.0%
ATTCGGGACGGTTGTGGCGA+TGG + chr7_2:73780581-73780600 Msa1075500:CDS 60.0%
ATGGCCATTGTTGGCGGGAC+TGG + chr7_2:73780798-73780817 Msa1075500:CDS 60.0%
TGGCCATTGTTGGCGGGACT+GGG + chr7_2:73780799-73780818 Msa1075500:CDS 60.0%
CGTTCGGGACCAGCCGTCAA+TGG - chr7_2:73775187-73775206 None:intergenic 65.0%
GGCCATTGTTGGCGGGACTG+GGG + chr7_2:73780800-73780819 Msa1075500:CDS 65.0%
AGCCCCAGTCCCGCCAACAA+TGG - chr7_2:73780805-73780824 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 73774920 73780926 73774920 ID=Msa1075500;Name=Msa1075500
chr7_2 mRNA 73774920 73780926 73774920 ID=Msa1075500-mRNA-1;Parent=Msa1075500;Name=Msa1075500-mRNA-1;_AED=0.08;_eAED=0.18;_QI=0|0|0|1|0|0|4|0|336
chr7_2 exon 73774920 73775111 73774920 ID=Msa1075500-mRNA-1:exon:17205;Parent=Msa1075500-mRNA-1
chr7_2 exon 73775139 73775363 73775139 ID=Msa1075500-mRNA-1:exon:17206;Parent=Msa1075500-mRNA-1
chr7_2 exon 73775371 73775480 73775371 ID=Msa1075500-mRNA-1:exon:17207;Parent=Msa1075500-mRNA-1
chr7_2 exon 73780443 73780926 73780443 ID=Msa1075500-mRNA-1:exon:17208;Parent=Msa1075500-mRNA-1
chr7_2 CDS 73774920 73775111 73774920 ID=Msa1075500-mRNA-1:cds;Parent=Msa1075500-mRNA-1
chr7_2 CDS 73775139 73775363 73775139 ID=Msa1075500-mRNA-1:cds;Parent=Msa1075500-mRNA-1
chr7_2 CDS 73775371 73775480 73775371 ID=Msa1075500-mRNA-1:cds;Parent=Msa1075500-mRNA-1
chr7_2 CDS 73780443 73780926 73780443 ID=Msa1075500-mRNA-1:cds;Parent=Msa1075500-mRNA-1
Gene Sequence

>Msa1075500

ATGGCAAAATCCTCATCATGCTCCACAATTCTCATTTCTTTTAACCTTACTTTCCTCGCCGTAATATCCCTTGTCACTGCCACTAATTACTATAAAAGCCTATCCCCAACAATGCTGGGTTTTCAAGAAGAGAAATTCACTCACCTTCACTTTTACTTTCACGACATTGTGTCAGGACCAAAACCTAGCATGGTAAAAAATGCGTTGCCATTCGGGACGGTTGTGGCCATGGATGACCCATTGACGGCTGGTCCCGAACGTGACTCGAAACTTGTGGGTAAGGCTCAAGGAATTTACACTTCTATATCACAAGAGGAGATGGGACTAATGATGGTGATGACCATGGCGTTCAGTGATGGAGATTTCAATGGAAGTACACTTAGCATATTGGGCAGAAACATGATCATGAGTGAACCTAAATGGCCATTGTTGGTGGGACTGGAGCTTTTCGTTTCGTACGTGGTTATGCTCAAGCTAAATTTTATTCTGTTGATTATACCAAAGGAGATGCCATTGTGGAATATGATCCTATCCCCAACAATGCTGGGTTTTCAAGAAGAGAAATTCACTCACCTTCACTTTTACTTTCACGACATTGTGTCAGGACCAAAACCTAGCATGGTATTTGTAGCTGAGCCTAATGGCAAGGTAAAAAATGCGTTGCCATTCGGGACGGTTGTGGCGATGGATGACCCATTGACAGCTGGTCCTGAACGTGACTCGAAACTTGTGGGTAAGGCTCAAGGAATTTACACTTCTATATCACAAGAGGAGATGGGACTAATGATGGTGATGACCATGGCATTCACTGATGGAGATTTCAATGGAAGTACACTTAGCATATTGGGCAGAAACATGATCATGAGTGAACCTGTTAGAGAAATGGCCATTGTTGGCGGGACTGGGGCTTTTCGTTTTGTACGTGGGTATGCTCAAGCTAAATTTTATTCCGTTGATTACACTAAGGGAGATGCCATTGTGGAATATGATATATTCGTATTCCATTATTAG
Protein sequence

>Msa1075500

MAKSSSCSTILISFNLTFLAVISLVTATNYYKSLSPTMLGFQEEKFTHLHFYFHDIVSGPKPSMVKNALPFGTVVAMDDPLTAGPERDSKLVGKAQGIYTSISQEEMGLMMVMTMAFSDGDFNGSTLSILGRNMIMSEPKWPLLVGLELFVSYVVMLKLNFILLIIPKEMPLWNMILSPTMLGFQEEKFTHLHFYFHDIVSGPKPSMVFVAEPNGKVKNALPFGTVVAMDDPLTAGPERDSKLVGKAQGIYTSISQEEMGLMMVMTMAFTDGDFNGSTLSILGRNMIMSEPVREMAIVGGTGAFRFVRGYAQAKFYSVDYTKGDAIVEYDIFVFHY*