AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1076930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1076930 MtrunA17_Chr7g0261081 96.305 866 31 1 1 865 1 866 0.0 1746
Msa1076930 MtrunA17_Chr1g0184191 77.445 869 189 6 1 865 1 866 0.0 1391
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1076930 AT2G31260.1 65.533 882 265 15 1 862 2 864 0.0 1122

Find 251 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCTTTGAAAGACTTTA+TGG 0.100521 7_2:+75478805 Msa1076930:CDS
GAATTTATAGTGGGAGTTTC+TGG 0.112453 7_2:-75483236 None:intergenic
AACTGCTTCCCCTGAGTATT+TGG 0.152672 7_2:-75482474 None:intergenic
AACAACTTTGTCAACAATTT+TGG 0.153920 7_2:-75479316 None:intergenic
GAAGGGTGCTTTCAATTAAA+TGG 0.190594 7_2:+75483317 Msa1076930:three_prime_UTR
GGAGAATTTAATCTACATTT+TGG 0.223978 7_2:+75483194 Msa1076930:CDS
AAAATATCATTGCAGATATT+TGG 0.224381 7_2:+75481288 Msa1076930:intron
CCCTTGAATGGACTTTAAAT+TGG 0.245163 7_2:+75479547 Msa1076930:CDS
TGTAGAACCAATTGCTGATT+TGG 0.253494 7_2:+75478780 Msa1076930:CDS
CCCATTTCACAATGGTTTCC+AGG 0.256603 7_2:+75479462 Msa1076930:CDS
GTAAGTGTGAGTGGGGTTAA+AGG 0.263267 7_2:-75479030 None:intergenic
GTCTTCATCCCCTGCCGTAT+TGG 0.264537 7_2:-75482589 None:intergenic
CGGAAGGAGAACTACTTAAT+TGG 0.265768 7_2:+75479411 Msa1076930:CDS
GTTATTCCATATGGTTCTAA+TGG 0.268064 7_2:-75482771 None:intergenic
CTGCTACGAGAGGCATTATA+TGG 0.271120 7_2:-75482049 None:intergenic
TTCTAGCCCACCAATGGCTT+CGG 0.278161 7_2:-75482980 None:intergenic
CAGGACTAGATTGAACTTTC+GGG 0.278462 7_2:-75479491 None:intergenic
TCTGAAGGGCTCTCACTTCC+TGG 0.293553 7_2:-75478733 None:intergenic
TCTTCATCCCCTGCCGTATT+GGG 0.293680 7_2:-75482588 None:intergenic
GTCCCTCTCTAATTGTTATC+TGG 0.296568 7_2:+75483366 Msa1076930:three_prime_UTR
TCCAGTAAAAGTGTTGTTCT+TGG 0.302842 7_2:-75483118 None:intergenic
CCTCATCAGCTCCCATCCTT+AGG 0.305842 7_2:+75482910 Msa1076930:CDS
TGCAATTGCAGATGAGCTTC+TGG 0.319750 7_2:+75481368 Msa1076930:CDS
GGGCTCTCACTTCCTGGACT+TGG 0.325164 7_2:-75478727 None:intergenic
TCAGGACTAGATTGAACTTT+CGG 0.327003 7_2:-75479492 None:intergenic
GAAGATAGGGGTGATTATTC+TGG 0.327635 7_2:-75482698 None:intergenic
AGCTATTATTGTTGGATACT+TGG 0.328327 7_2:+75479056 Msa1076930:CDS
GGACTACCCCTCCACATTCT+AGG 0.344102 7_2:-75482567 None:intergenic
ACAATAAACAGAAGTAAATA+TGG 0.345471 7_2:-75481685 None:intergenic
AAGGTGTTGGGCATGTTTGC+AGG 0.345877 7_2:+75481844 Msa1076930:CDS
GAACCTTGTTATAACCGTTT+TGG 0.346406 7_2:+75478521 Msa1076930:intron
TTTGAGTATTCTTCATAGTT+GGG 0.347898 7_2:-75482846 None:intergenic
TTAGGTTCAGCTCACCCCTT+TGG 0.349582 7_2:+75478180 Msa1076930:intron
ATTTGAGTATTCTTCATAGT+TGG 0.350704 7_2:-75482847 None:intergenic
TAACGTTCTGTTATTCCATA+TGG 0.351902 7_2:-75482780 None:intergenic
TACTATATGTTGATTGGAAT+GGG 0.357764 7_2:+75478923 Msa1076930:CDS
GATTGTTGAACTTCTAAGTC+TGG 0.359203 7_2:+75478870 Msa1076930:CDS
CTTACCAAAGCTATTATTGT+TGG 0.359747 7_2:+75479048 Msa1076930:CDS
AGCTCACCCCTTTGGGACTT+TGG 0.363145 7_2:+75478188 Msa1076930:five_prime_UTR
TATTTGGTCGGAACTTGTTT+TGG 0.363325 7_2:+75481304 Msa1076930:CDS
CCTGGAAACCATTGTGAAAT+GGG 0.364513 7_2:-75479462 None:intergenic
GGGGTCCTTGCATCTGAAAA+TGG 0.365269 7_2:-75483491 None:intergenic
CAGAAAAGGCTTATGGTAGT+TGG 0.367074 7_2:+75480089 Msa1076930:CDS
TCTAGCCCACCAATGGCTTC+GGG 0.369897 7_2:-75482979 None:intergenic
TGAATTTGAAACCTTATTCC+AGG 0.371525 7_2:+75481488 Msa1076930:CDS
TAGGTTCAGCTCACCCCTTT+GGG 0.373846 7_2:+75478181 Msa1076930:intron
GTTGTTTGGTCATTGAAATC+TGG 0.373910 7_2:-75483047 None:intergenic
ATCACCCCTATCTTCTTGAT+TGG 0.376879 7_2:+75482706 Msa1076930:CDS
TCTTTGCCACGCCATCTCTT+TGG 0.378039 7_2:-75481444 None:intergenic
CAGGCAGAATACCTGGAATA+AGG 0.378454 7_2:-75481499 None:intergenic
TTTGCTGTATATAGATTCAT+TGG 0.378561 7_2:+75483400 Msa1076930:three_prime_UTR
GGAATTAAGCCCTGTGATCT+TGG 0.378592 7_2:+75478985 Msa1076930:CDS
GACATTACAGAAAAGGCTTA+TGG 0.380010 7_2:+75480082 Msa1076930:CDS
AACAATGACAGATGACTTAG+AGG 0.383575 7_2:+75483169 Msa1076930:CDS
TCACAATGGTTTCCAGGTGC+TGG 0.383647 7_2:+75479468 Msa1076930:CDS
TTCAACATTTACAGTGAAAT+CGG 0.386132 7_2:-75481823 None:intergenic
GCTATTATTGTTGGATACTT+GGG 0.389328 7_2:+75479057 Msa1076930:CDS
TTTAGCAGACCAAGTGGTTC+CGG 0.389483 7_2:+75478598 Msa1076930:CDS
TAAAGTCCATTCAAGGGTCT+TGG 0.389766 7_2:-75479541 None:intergenic
GAGCATGGAAACTCTCATTA+TGG 0.390073 7_2:+75482022 Msa1076930:CDS
ACCTGGAAACCATTGTGAAA+TGG 0.391785 7_2:-75479463 None:intergenic
CATGATAATTATATGTTGTT+TGG 0.395237 7_2:-75483061 None:intergenic
TACTCAAAAGCTAGCAGTGC+TGG 0.395445 7_2:-75483258 None:intergenic
GTAGTACCAATCAAGAAGAT+AGG 0.404579 7_2:-75482712 None:intergenic
GATCGGGCTGCATCTCAACT+TGG 0.409523 7_2:+75482882 Msa1076930:CDS
CTTCGAGATGATGCTGTGCT+TGG 0.409901 7_2:-75480200 None:intergenic
TCCTACATAGCATGTTTGAT+TGG 0.414671 7_2:+75479574 Msa1076930:CDS
AGAAAAGGCTTATGGTAGTT+GGG 0.415599 7_2:+75480090 Msa1076930:CDS
TGAGTATTTGGTTCCCATGA+TGG 0.416490 7_2:-75482462 None:intergenic
GGCTCTCACTTCCTGGACTT+GGG 0.417635 7_2:-75478726 None:intergenic
GGGATGGATGCTGTTGAATC+TGG 0.418976 7_2:+75478964 Msa1076930:CDS
TTCAGAGTAGTTATCCATCA+TGG 0.419889 7_2:+75482448 Msa1076930:CDS
ATCGGGCTGCATCTCAACTT+GGG 0.423241 7_2:+75482883 Msa1076930:CDS
GAAACAAAACATCCAATAGA+AGG 0.424244 7_2:-75479088 None:intergenic
TTACTATATGTTGATTGGAA+TGG 0.426389 7_2:+75478922 Msa1076930:CDS
AGCTTCTTTGCCAAGATCAC+AGG 0.430987 7_2:-75478995 None:intergenic
TCCCGAGGGAACAATATCTA+TGG 0.431420 7_2:+75481398 Msa1076930:CDS
TTGGTCTTTGGGGAATGGAT+TGG 0.441248 7_2:+75478540 Msa1076930:five_prime_UTR
ACCAATTTAAAGTCCATTCA+AGG 0.443781 7_2:-75479548 None:intergenic
CAGGGGATGAAGACAGAAAC+AGG 0.448292 7_2:+75482598 Msa1076930:CDS
ATTGTTGAACTTCTAAGTCT+GGG 0.448533 7_2:+75478871 Msa1076930:CDS
AAGGAGTTCACAGGGAAAGA+TGG 0.449011 7_2:+75482072 Msa1076930:CDS
TATGGTTACTACTGTGAGAA+AGG 0.450099 7_2:+75478823 Msa1076930:CDS
CACCATAGATATTGTTCCCT+CGG 0.451923 7_2:-75481400 None:intergenic
TAAGTGTGAGTGGGGTTAAA+GGG 0.453021 7_2:-75479029 None:intergenic
GTATCCAACAATAATAGCTT+TGG 0.455646 7_2:-75479052 None:intergenic
AGCCCTTCAGATTTCCTCAA+TGG 0.457772 7_2:+75478745 Msa1076930:CDS
ACCAATGGCTTCGGGTTGTG+TGG 0.457791 7_2:-75482971 None:intergenic
AAGAGATCCAAATCAGCAAT+TGG 0.458966 7_2:-75478787 None:intergenic
CCTTAGGGAGAGCTTTAGTC+AGG 0.459193 7_2:+75482926 Msa1076930:CDS
GCGATTCTTTGCTCAACTAA+AGG 0.459966 7_2:+75479113 Msa1076930:CDS
TACTTACCAAGACCCTTGAA+TGG 0.460856 7_2:+75479535 Msa1076930:CDS
TGAACTTTCGGGCCAGCACC+TGG 0.463130 7_2:-75479480 None:intergenic
ATCCAAAGACATTACAGAAA+AGG 0.464783 7_2:+75480075 Msa1076930:CDS
AGCAGTGCTGGAATTTATAG+TGG 0.465268 7_2:-75483246 None:intergenic
CCAATGGCTTCGGGTTGTGT+GGG 0.465775 7_2:-75482970 None:intergenic
ACAGAAACAGGTTTATATCC+AGG 0.466653 7_2:+75482610 Msa1076930:CDS
TTTGCAATGATAGATATGAT+AGG 0.466727 7_2:-75481108 None:intergenic
CTCATCAGCTCCCATCCTTA+GGG 0.467690 7_2:+75482911 Msa1076930:CDS
TATAGGTCGACCATCTCTTC+AGG 0.471785 7_2:+75481028 Msa1076930:intron
TGCTACGAGAGGCATTATAT+GGG 0.472893 7_2:-75482048 None:intergenic
TTCGAGATGATGCTGTGCTT+GGG 0.476956 7_2:-75480199 None:intergenic
TTTATTATAAAGTTTGCGTT+CGG 0.478832 7_2:-75477264 None:intergenic
GAACTATAACTGCTATTAGC+CGG 0.481240 7_2:+75481343 Msa1076930:CDS
TCAGTCTCATGACTATATCA+TGG 0.482419 7_2:-75479386 None:intergenic
TAGTACCAATCAAGAAGATA+GGG 0.482945 7_2:-75482711 None:intergenic
ACTGTAAATGTTGAAGGTGT+TGG 0.484395 7_2:+75481831 Msa1076930:CDS
GAGATCGAATTGTCTAATTA+CGG 0.486113 7_2:+75478697 Msa1076930:CDS
TCTACGGAGTGGACAAGCTC+AGG 0.488656 7_2:+75483007 Msa1076930:CDS
GATGTTCCATTAGAACCATA+TGG 0.488783 7_2:+75482765 Msa1076930:CDS
ATGAAATTCAAACTATGCCC+TGG 0.493235 7_2:+75479292 Msa1076930:CDS
CTGTAAATGTTGAAGGTGTT+GGG 0.496375 7_2:+75481832 Msa1076930:CDS
AAACGATATTGTGCTCCATC+AGG 0.497164 7_2:-75479510 None:intergenic
ATGATAGATATGATAGGTGT+AGG 0.502443 7_2:-75481102 None:intergenic
AGGACCCCAGCAAAATAGTC+TGG 0.502578 7_2:+75483506 Msa1076930:three_prime_UTR
AAATGAGTATCACGAGGATC+GGG 0.504809 7_2:+75482866 Msa1076930:CDS
AATGAACCTCAGCTTGATGT+TGG 0.510192 7_2:+75483441 Msa1076930:three_prime_UTR
TAATTAGACAATTCGATCTC+CGG 0.512269 7_2:-75478694 None:intergenic
ATTCCTTGTCATATTCATGC+TGG 0.512407 7_2:+75480136 Msa1076930:CDS
CATATACACTTTCTCCATTG+AGG 0.512728 7_2:-75478759 None:intergenic
GATTTCACTGTAAATGTTGA+AGG 0.515835 7_2:+75481825 Msa1076930:CDS
ATCATGGGAACCAAATACTC+AGG 0.518116 7_2:+75482464 Msa1076930:CDS
ACTACTGTGAGAAAGGGTTA+TGG 0.518635 7_2:+75478830 Msa1076930:CDS
AGGGGTAGTCCCAATACGGC+AGG 0.521250 7_2:+75482579 Msa1076930:CDS
CAAATGAGTATCACGAGGAT+CGG 0.521885 7_2:+75482865 Msa1076930:CDS
AATGATGTTACTTGAGGAGA+TGG 0.523349 7_2:+75481645 Msa1076930:CDS
TATGGTGTATTGTTACAAAG+TGG 0.525702 7_2:+75478848 Msa1076930:CDS
GGAAGGCATCGAATAGTCTC+TGG 0.526974 7_2:-75482805 None:intergenic
ACCATAGATATTGTTCCCTC+GGG 0.527633 7_2:-75481399 None:intergenic
GTCAACGCCAAAGTCCCAAA+GGG 0.527737 7_2:-75478195 None:intergenic
GCACAGCATCATCTCGAAGA+TGG 0.528098 7_2:+75480204 Msa1076930:CDS
ATGGTTACTACTGTGAGAAA+GGG 0.529048 7_2:+75478824 Msa1076930:CDS
TAGCTTTGGTAAGTGTGAGT+GGG 0.530753 7_2:-75479038 None:intergenic
GAAGATGGTCAAACTTGTCT+AGG 0.533585 7_2:+75480219 Msa1076930:CDS
AGCATGAATATGACAAGGAA+TGG 0.534278 7_2:-75480134 None:intergenic
TCATTCTGTGTCAAGTTGGA+AGG 0.535353 7_2:-75482822 None:intergenic
TGTTCACAGACACTAATAGT+AGG 0.535903 7_2:-75478572 None:intergenic
ACTTCTGTTTATTGTCCCAA+AGG 0.536240 7_2:+75481693 Msa1076930:CDS
CCTAAGGATGGGAGCTGATG+AGG 0.537502 7_2:-75482910 None:intergenic
TCAGAGTAGTTATCCATCAT+GGG 0.539771 7_2:+75482449 Msa1076930:CDS
CTATTATTGTTGGATACTTG+GGG 0.540123 7_2:+75479058 Msa1076930:CDS
TCCATGCTCTTGAAAATCAA+AGG 0.540684 7_2:-75482008 None:intergenic
AACTATAACTGCTATTAGCC+GGG 0.542388 7_2:+75481344 Msa1076930:CDS
ACTAAAGCTCTCCCTAAGGA+TGG 0.543023 7_2:-75482922 None:intergenic
ATAGGGGTGATTATTCTGGT+TGG 0.544484 7_2:-75482694 None:intergenic
AAAGTTCAATCTAGTCCTGA+TGG 0.544493 7_2:+75479495 Msa1076930:CDS
CCCACACAACCCGAAGCCAT+TGG 0.547154 7_2:+75482970 Msa1076930:CDS
TAATCCGATGCCTGAAGAGA+TGG 0.549224 7_2:-75481038 None:intergenic
ACACAACCCGAAGCCATTGG+TGG 0.550262 7_2:+75482973 Msa1076930:CDS
CTCGAGGAGTCTCTGCTAGA+GGG 0.550555 7_2:+75481186 Msa1076930:CDS
TTGTTCTCGTTCAAAATACT+CGG 0.551966 7_2:+75479334 Msa1076930:CDS
TCTCGAGGAGTCTCTGCTAG+AGG 0.552554 7_2:+75481185 Msa1076930:CDS
CTAAAAGCACCGGAACCACT+TGG 0.553267 7_2:-75478607 None:intergenic
GTTCGGAAGGAGATGAGCAT+AGG 0.553415 7_2:-75477247 None:intergenic
GCTTCTTTGCCAAGATCACA+GGG 0.553864 7_2:-75478994 None:intergenic
GTGGAGGGGTAGTCCCAATA+CGG 0.557059 7_2:+75482575 Msa1076930:CDS
GGGTAGTCCCAATACGGCAG+GGG 0.557263 7_2:+75482581 Msa1076930:CDS
TTATAAAGTTTGCGTTCGGA+AGG 0.557342 7_2:-75477260 None:intergenic
ACCAATCAAACATGCTATGT+AGG 0.558613 7_2:-75479575 None:intergenic
ATGACAGATGACTTAGAGGC+AGG 0.558731 7_2:+75483173 Msa1076930:CDS
TGCTGGCATATCTCTTTCTG+AGG 0.559787 7_2:+75480153 Msa1076930:CDS
TCGTAGCAGAAGGAGTTCAC+AGG 0.560103 7_2:+75482063 Msa1076930:CDS
TTAGTTGAGCAAAGAATCGC+AGG 0.562238 7_2:-75479110 None:intergenic
TCGACCATCTCTTCAGGCAT+CGG 0.562994 7_2:+75481034 Msa1076930:CDS
GGCGCGTCATCTTTGACTAG+AGG 0.563241 7_2:+75478652 Msa1076930:CDS
GGGCTCCGTAATGCAAAATG+TGG 0.563493 7_2:+75478943 Msa1076930:CDS
TTGTTGAACTTCTAAGTCTG+GGG 0.566155 7_2:+75478872 Msa1076930:CDS
AGTGCTGTATGGCATTTCCC+TGG 0.566226 7_2:-75482628 None:intergenic
TACGGAAGGATCCCAAGTCC+AGG 0.566589 7_2:+75478715 Msa1076930:CDS
CTTAATTGGAATGCTCAACA+AGG 0.567745 7_2:+75479425 Msa1076930:CDS
TATCATTGCAGATATTTGGT+CGG 0.568586 7_2:+75481292 Msa1076930:intron
CAGAAACAGGTTTATATCCA+GGG 0.569124 7_2:+75482611 Msa1076930:CDS
TTCCCCTCCTAGAATGTGGA+GGG 0.569698 7_2:+75482560 Msa1076930:CDS
CAGAATTGCAGCAAAGCCAC+CGG 0.573817 7_2:-75481148 None:intergenic
TTTGAATATACTAAAAGCAC+CGG 0.574468 7_2:-75478617 None:intergenic
TTTACTTCATGATGATTCGC+CGG 0.574817 7_2:+75478675 Msa1076930:CDS
CACAACCCGAAGCCATTGGT+GGG 0.577683 7_2:+75482974 Msa1076930:CDS
CTCCATTGAGGAAATCTGAA+GGG 0.578699 7_2:-75478747 None:intergenic
TCTCCATTGAGGAAATCTGA+AGG 0.580109 7_2:-75478748 None:intergenic
AGCTTTGGTAAGTGTGAGTG+GGG 0.580159 7_2:-75479037 None:intergenic
TTGCTTTCCCCATTTCACAA+TGG 0.581632 7_2:+75479454 Msa1076930:CDS
GGGGTAGTCCCAATACGGCA+GGG 0.581900 7_2:+75482580 Msa1076930:CDS
CCATTCCCCAAAGACCAAAA+CGG 0.583103 7_2:-75478535 None:intergenic
CCAGTTGCAAAAGTGCTGTA+TGG 0.583969 7_2:-75482639 None:intergenic
AGATGATGAAACAGTAGCGA+AGG 0.584404 7_2:-75477424 None:intergenic
GTTTGGTCATTGAAATCTGG+AGG 0.584448 7_2:-75483044 None:intergenic
CACATTATATGCCAAAGAGA+TGG 0.585314 7_2:+75481433 Msa1076930:CDS
GAGCGGAAGTTATCAGTACA+TGG 0.585425 7_2:+75482522 Msa1076930:CDS
TTTCCAGATAACAATTAGAG+AGG 0.586115 7_2:-75483369 None:intergenic
GATGAAACAGTAGCGAAGGA+AGG 0.589559 7_2:-75477420 None:intergenic
TCGGAAACTATGTGTGCTGA+AGG 0.593556 7_2:+75479353 Msa1076930:CDS
CTAAAGCTCTCCCTAAGGAT+GGG 0.595120 7_2:-75482921 None:intergenic
GGGTTCATTCTGTGTCAAGT+TGG 0.595429 7_2:-75482826 None:intergenic
CCTGACTAAAGCTCTCCCTA+AGG 0.596692 7_2:-75482926 None:intergenic
TGAAATTCAAACTATGCCCT+GGG 0.597379 7_2:+75479293 Msa1076930:CDS
TCGGGCTGCATCTCAACTTG+GGG 0.597814 7_2:+75482884 Msa1076930:CDS
CAGTCTCATGACTATATCAT+GGG 0.597885 7_2:-75479385 None:intergenic
GACGACTTCTAGCCCACCAA+TGG 0.598590 7_2:-75482986 None:intergenic
TCCTTGCATCTGAAAATGGA+AGG 0.598956 7_2:-75483487 None:intergenic
GGTGGGCTAGAAGTCGTCTA+CGG 0.600262 7_2:+75482991 Msa1076930:CDS
TTCCAGATAACAATTAGAGA+GGG 0.601046 7_2:-75483368 None:intergenic
ATAGCTTTGGTAAGTGTGAG+TGG 0.602946 7_2:-75479039 None:intergenic
CCAATTTAAAGTCCATTCAA+GGG 0.603846 7_2:-75479547 None:intergenic
CCGTAATGCAAAATGTGGGA+TGG 0.604122 7_2:+75478948 Msa1076930:CDS
ACCCCTCCACATTCTAGGAG+GGG 0.604562 7_2:-75482562 None:intergenic
GCTCATCTGCAATTGCAGCC+CGG 0.605056 7_2:-75481362 None:intergenic
TGTCAACGCCAAAGTCCCAA+AGG 0.605903 7_2:-75478196 None:intergenic
TTTATAGTGGGAGTTTCTGG+AGG 0.606997 7_2:-75483233 None:intergenic
CTTCCCCTCCTAGAATGTGG+AGG 0.608862 7_2:+75482559 Msa1076930:CDS
CAATGGCTTCGGGTTGTGTG+GGG 0.610424 7_2:-75482969 None:intergenic
TCATGGGAACCAAATACTCA+GGG 0.611108 7_2:+75482465 Msa1076930:CDS
TAAGTTCCAACATCAAGCTG+AGG 0.612971 7_2:-75483447 None:intergenic
CATCTTCCCCTCCTAGAATG+TGG 0.614729 7_2:+75482556 Msa1076930:CDS
TACCCCTCCACATTCTAGGA+GGG 0.614814 7_2:-75482563 None:intergenic
AGAGAGGGACAATCATGACT+TGG 0.617793 7_2:-75483353 None:intergenic
ACAGAAGTAAATATGGAGTG+AGG 0.618250 7_2:-75481678 None:intergenic
AGATGGAGAAATCATTGTTG+AGG 0.619203 7_2:+75482089 Msa1076930:CDS
TACAGCAATGATGTTACTTG+AGG 0.621146 7_2:+75481639 Msa1076930:CDS
TCTCTTGAAGCTGCATCATG+AGG 0.621641 7_2:-75482744 None:intergenic
GCAATCACTTGGATTCGTTG+TGG 0.621682 7_2:+75482661 Msa1076930:CDS
ATATTCAAATGGAAACAGAA+AGG 0.623281 7_2:+75478631 Msa1076930:CDS
CGTAGCAGAAGGAGTTCACA+GGG 0.625758 7_2:+75482064 Msa1076930:CDS
ATCTTAGAACATTCAGAGAG+CGG 0.626044 7_2:+75482505 Msa1076930:CDS
CGAGGGAACAATATCTATGG+TGG 0.626273 7_2:+75481401 Msa1076930:CDS
TCGAATTGTCTAATTACGGA+AGG 0.628393 7_2:+75478701 Msa1076930:CDS
TATATAGATTCATTGGTGTG+AGG 0.629591 7_2:+75483407 Msa1076930:three_prime_UTR
CTACCCCTCCACATTCTAGG+AGG 0.629863 7_2:-75482564 None:intergenic
ATAATGCCTCTCGTAGCAGA+AGG 0.629914 7_2:+75482053 Msa1076930:CDS
GCAGTGCTGGAATTTATAGT+GGG 0.639720 7_2:-75483245 None:intergenic
GCTTCTGGTCTTAGATCCCG+AGG 0.643614 7_2:+75481383 Msa1076930:CDS
AGTCATGAGACTGATGCGGA+AGG 0.646846 7_2:+75479395 Msa1076930:CDS
GATGGTCAAACTTGTCTAGG+TGG 0.647207 7_2:+75480222 Msa1076930:CDS
CTGGAAACCATTGTGAAATG+GGG 0.649696 7_2:-75479461 None:intergenic
TCCCCTCCTAGAATGTGGAG+GGG 0.656107 7_2:+75482561 Msa1076930:CDS
GCTAGAAGTCGTCTACGGAG+TGG 0.667710 7_2:+75482996 Msa1076930:CDS
AGACCAAAACGGTTATAACA+AGG 0.668823 7_2:-75478524 None:intergenic
TATATGCCAAAGAGATGGCG+TGG 0.670967 7_2:+75481438 Msa1076930:CDS
TTAATTGGAATGCTCAACAA+GGG 0.673370 7_2:+75479426 Msa1076930:CDS
ACAATGTTTAGCAGACCAAG+TGG 0.673800 7_2:+75478592 Msa1076930:exon
TGGCAAAGAAATTACTGACG+TGG 0.676549 7_2:+75481458 Msa1076930:CDS
ATATAGTCATGAGACTGATG+CGG 0.679190 7_2:+75479391 Msa1076930:CDS
GGCTCCGTAATGCAAAATGT+GGG 0.679327 7_2:+75478944 Msa1076930:CDS
AGTACCAATCAAGAAGATAG+GGG 0.679475 7_2:-75482710 None:intergenic
CTTCTGGTCTTAGATCCCGA+GGG 0.679702 7_2:+75481384 Msa1076930:CDS
TGAACTCCTTCTGCTACGAG+AGG 0.680258 7_2:-75482059 None:intergenic
GCTACGAGAGGCATTATATG+GGG 0.685648 7_2:-75482047 None:intergenic
ATGCCAGCATGAATATGACA+AGG 0.687544 7_2:-75480139 None:intergenic
TCAACGCCAAAGTCCCAAAG+GGG 0.723951 7_2:-75478194 None:intergenic
ATAAGGTTTCAAATTCAATG+CGG 0.726994 7_2:-75481482 None:intergenic
ATACTCAAATGAGTATCACG+AGG 0.745566 7_2:+75482860 Msa1076930:CDS
CATGGGAACCAAATACTCAG+GGG 0.758921 7_2:+75482466 Msa1076930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTATTGGAAAATTTA+TGG + chr7_2:75480583-75480602 Msa1076930:intron 10.0%
!!! TGATAATTTTTTTTTAGTAT+AGG + chr7_2:75480626-75480645 Msa1076930:intron 10.0%
!! TAAAATTCAAAACATATATA+TGG - chr7_2:75482185-75482204 None:intergenic 10.0%
!!! TTTTTTATACTTTTGTGAAA+TGG + chr7_2:75478129-75478148 Msa1076930:intron 15.0%
!!! TTATTTTTCTGTTGTTTATT+TGG + chr7_2:75478395-75478414 Msa1076930:intron 15.0%
!!! TATTTTTCTGTTGTTTATTT+GGG + chr7_2:75478396-75478415 Msa1076930:intron 15.0%
!! GTAAGATTCTAATATTAATT+TGG + chr7_2:75478487-75478506 Msa1076930:intron 15.0%
!!! TTTTTTTACTATATGTTGAT+TGG + chr7_2:75478917-75478936 Msa1076930:CDS 15.0%
!! ACACATTATTAAATATTATC+AGG - chr7_2:75479661-75479680 None:intergenic 15.0%
!!! CTATTCATGAAAATTTTTAT+TGG + chr7_2:75480572-75480591 Msa1076930:intron 15.0%
!! ATTTATGGAAATTACAATAA+AGG + chr7_2:75480598-75480617 Msa1076930:intron 15.0%
!! TATTTATTTACACATAGAAT+AGG + chr7_2:75481571-75481590 Msa1076930:intron 15.0%
!! CAAAATATTCATAATAGTAA+TGG - chr7_2:75482217-75482236 None:intergenic 15.0%
!!! TCCAAAAAAAATTATTTTAC+TGG - chr7_2:75482372-75482391 None:intergenic 15.0%
!! AATTAAACGAAAATACATAT+AGG - chr7_2:75482404-75482423 None:intergenic 15.0%
!! TTTATTATAAAGTTTGCGTT+CGG - chr7_2:75477267-75477286 None:intergenic 20.0%
!! TCATTGATATTCATATGATA+TGG - chr7_2:75477499-75477518 None:intergenic 20.0%
!! CATATGAATATCAATGATTT+CGG + chr7_2:75477502-75477521 Msa1076930:intron 20.0%
!!! TAACTGAATTTGTTCTTTTT+TGG + chr7_2:75477800-75477819 Msa1076930:intron 20.0%
!! TATACAAATACAATGATCTT+TGG + chr7_2:75477857-75477876 Msa1076930:intron 20.0%
!!! TTGATTATTTTTGAACACTT+AGG + chr7_2:75478076-75478095 Msa1076930:intron 20.0%
!! ATTTCACAAAATGGTTAAAA+GGG - chr7_2:75479722-75479741 None:intergenic 20.0%
!!! TTTTAACCATTTTGTGAAAT+CGG + chr7_2:75479722-75479741 Msa1076930:intron 20.0%
!! ATAAATTGCATCCTTATATA+AGG - chr7_2:75479798-75479817 None:intergenic 20.0%
!! TTTCAAATTTCATGTTATTC+TGG + chr7_2:75479839-75479858 Msa1076930:intron 20.0%
!! AATTTCATAGTTAGTTGTAT+AGG + chr7_2:75479871-75479890 Msa1076930:intron 20.0%
!!! GTTTATTTTCAGTACATAAT+TGG + chr7_2:75480414-75480433 Msa1076930:intron 20.0%
!!! AACTTCAAATTTTTCTTTCA+TGG - chr7_2:75480544-75480563 None:intergenic 20.0%
!!! TTTTCAAACAACATAAATGA+TGG - chr7_2:75480830-75480849 None:intergenic 20.0%
!!! TTATCAATAACTTGTGTTAT+AGG + chr7_2:75481011-75481030 Msa1076930:intron 20.0%
!!! AAATTCATATCTTTTGTATC+CGG + chr7_2:75481129-75481148 Msa1076930:CDS 20.0%
!! AAAATATCATTGCAGATATT+TGG + chr7_2:75481288-75481307 Msa1076930:intron 20.0%
!! ACAATAAACAGAAGTAAATA+TGG - chr7_2:75481688-75481707 None:intergenic 20.0%
!! TACTTGGAGATTTATTTATA+TGG + chr7_2:75481725-75481744 Msa1076930:intron 20.0%
!!! GCCAGTAAAATAATTTTTTT+TGG + chr7_2:75482368-75482387 Msa1076930:intron 20.0%
!! CATGATAATTATATGTTGTT+TGG - chr7_2:75483064-75483083 None:intergenic 20.0%
!! AAACTCTTTTCTTTACTTCA+AGG + chr7_2:75477449-75477468 Msa1076930:five_prime_UTR 25.0%
! CATATGATATGGAAAAGAAA+GGG - chr7_2:75477488-75477507 None:intergenic 25.0%
! TCATATGATATGGAAAAGAA+AGG - chr7_2:75477489-75477508 None:intergenic 25.0%
! CAACTATCTTAACTATTCAT+TGG - chr7_2:75477950-75477969 None:intergenic 25.0%
! AGTTAAGATAGTTGAAAATG+CGG + chr7_2:75477956-75477975 Msa1076930:intron 25.0%
!! ACATTTGAAGATGATGTTTT+AGG + chr7_2:75478162-75478181 Msa1076930:intron 25.0%
!! TTTGAATATACTAAAAGCAC+CGG - chr7_2:75478620-75478639 None:intergenic 25.0%
!! GTGCTTTTAGTATATTCAAA+TGG + chr7_2:75478620-75478639 Msa1076930:CDS 25.0%
! ATATTCAAATGGAAACAGAA+AGG + chr7_2:75478631-75478650 Msa1076930:CDS 25.0%
!! AAAAAATCCTGAAAAGCATA+TGG - chr7_2:75478902-75478921 None:intergenic 25.0%
!! TTACTATATGTTGATTGGAA+TGG + chr7_2:75478922-75478941 Msa1076930:CDS 25.0%
!! TACTATATGTTGATTGGAAT+GGG + chr7_2:75478923-75478942 Msa1076930:CDS 25.0%
!! AACAACTTTGTCAACAATTT+TGG - chr7_2:75479319-75479338 None:intergenic 25.0%
!! GTATGAATTATTGTCTTTTG+AGG + chr7_2:75479679-75479698 Msa1076930:intron 25.0%
! AAATGGTTAAAAGGGAAAAT+TGG - chr7_2:75479714-75479733 None:intergenic 25.0%
! GATTTCACAAAATGGTTAAA+AGG - chr7_2:75479723-75479742 None:intergenic 25.0%
! ATAAGGATGCAATTTATATC+TGG + chr7_2:75479801-75479820 Msa1076930:intron 25.0%
!! AGGTATCATATTCATTTTCT+TGG + chr7_2:75480264-75480283 Msa1076930:intron 25.0%
! AACTGAATAAAATATGCACT+TGG - chr7_2:75480397-75480416 None:intergenic 25.0%
!!! CTTGCATATTTTTTTGAAAC+AGG + chr7_2:75480746-75480765 Msa1076930:intron 25.0%
! TGTAACATAGTTATTTGACT+TGG + chr7_2:75480804-75480823 Msa1076930:intron 25.0%
!! TAATTCTAAAAACGATAACC+AGG - chr7_2:75480956-75480975 None:intergenic 25.0%
! TTTGCAATGATAGATATGAT+AGG - chr7_2:75481111-75481130 None:intergenic 25.0%
! ATAAGGTTTCAAATTCAATG+CGG - chr7_2:75481485-75481504 None:intergenic 25.0%
!! CATAATGTGAATGTATTGAT+CGG - chr7_2:75481531-75481550 None:intergenic 25.0%
! TTCAACATTTACAGTGAAAT+CGG - chr7_2:75481826-75481845 None:intergenic 25.0%
! CTCATAAGACAAAATTCATT+AGG + chr7_2:75482136-75482155 Msa1076930:intron 25.0%
! TAAGACAAAATTCATTAGGA+AGG + chr7_2:75482140-75482159 Msa1076930:intron 25.0%
!!! GTGCATGCTTTTTAATTTTT+TGG + chr7_2:75482249-75482268 Msa1076930:intron 25.0%
! TTTGAGTATTCTTCATAGTT+GGG - chr7_2:75482849-75482868 None:intergenic 25.0%
! ATTTGAGTATTCTTCATAGT+TGG - chr7_2:75482850-75482869 None:intergenic 25.0%
!! GGAGAATTTAATCTACATTT+TGG + chr7_2:75483194-75483213 Msa1076930:CDS 25.0%
!! TTTGCTGTATATAGATTCAT+TGG + chr7_2:75483400-75483419 Msa1076930:three_prime_UTR 25.0%
!! GATTTTTGTTTATAGTTGCG+TGG - chr7_2:75477358-75477377 None:intergenic 30.0%
! GTTTGCATATTTTGTAACGT+TGG + chr7_2:75477659-75477678 Msa1076930:intron 30.0%
!!! CTTTTTTGGTCTGACATTTA+TGG + chr7_2:75477814-75477833 Msa1076930:intron 30.0%
TGGAGCAATTATCATAACAT+GGG - chr7_2:75478008-75478027 None:intergenic 30.0%
ATGGAGCAATTATCATAACA+TGG - chr7_2:75478009-75478028 None:intergenic 30.0%
TGTTATGATAATTGCTCCAT+TGG + chr7_2:75478009-75478028 Msa1076930:intron 30.0%
GTTATGATAATTGCTCCATT+GGG + chr7_2:75478010-75478029 Msa1076930:intron 30.0%
ACAAATACACATTGCCAATT+TGG - chr7_2:75478041-75478060 None:intergenic 30.0%
AAAGTTTGAGAGAGAAAGTT+AGG - chr7_2:75478106-75478125 None:intergenic 30.0%
GAAAAATAAAAGCGAAGACA+AGG - chr7_2:75478384-75478403 None:intergenic 30.0%
TTGCAAATTGCATTCCTATT+TGG - chr7_2:75478425-75478444 None:intergenic 30.0%
!! TTATAACCGTTTTGGTCTTT+GGG + chr7_2:75478529-75478548 Msa1076930:five_prime_UTR 30.0%
TAATTAGACAATTCGATCTC+CGG - chr7_2:75478697-75478716 None:intergenic 30.0%
GAGATCGAATTGTCTAATTA+CGG + chr7_2:75478697-75478716 Msa1076930:CDS 30.0%
! CTCTTCTTTGAAAGACTTTA+TGG + chr7_2:75478805-75478824 Msa1076930:CDS 30.0%
TATGGTGTATTGTTACAAAG+TGG + chr7_2:75478848-75478867 Msa1076930:CDS 30.0%
ATTGTTGAACTTCTAAGTCT+GGG + chr7_2:75478871-75478890 Msa1076930:CDS 30.0%
CTTACCAAAGCTATTATTGT+TGG + chr7_2:75479048-75479067 Msa1076930:CDS 30.0%
GTATCCAACAATAATAGCTT+TGG - chr7_2:75479055-75479074 None:intergenic 30.0%
AGCTATTATTGTTGGATACT+TGG + chr7_2:75479056-75479075 Msa1076930:CDS 30.0%
GCTATTATTGTTGGATACTT+GGG + chr7_2:75479057-75479076 Msa1076930:CDS 30.0%
CTATTATTGTTGGATACTTG+GGG + chr7_2:75479058-75479077 Msa1076930:CDS 30.0%
GAAACAAAACATCCAATAGA+AGG - chr7_2:75479091-75479110 None:intergenic 30.0%
TTGTTCTCGTTCAAAATACT+CGG + chr7_2:75479334-75479353 Msa1076930:CDS 30.0%
TTAATTGGAATGCTCAACAA+GGG + chr7_2:75479426-75479445 Msa1076930:CDS 30.0%
! CCAATTTAAAGTCCATTCAA+GGG - chr7_2:75479550-75479569 None:intergenic 30.0%
! ACCAATTTAAAGTCCATTCA+AGG - chr7_2:75479551-75479570 None:intergenic 30.0%
! AACAAACCGATTTCACAAAA+TGG - chr7_2:75479731-75479750 None:intergenic 30.0%
TTGTTTGTTTGAAGGATAGA+AGG + chr7_2:75479750-75479769 Msa1076930:intron 30.0%
ATAGTTAGTTGTATAGGAGT+TGG + chr7_2:75479877-75479896 Msa1076930:intron 30.0%
GATTGACATATGTTGTGATT+CGG + chr7_2:75479940-75479959 Msa1076930:intron 30.0%
GTAGCAAAAGTCATGTTTAA+AGG - chr7_2:75480021-75480040 None:intergenic 30.0%
! TTAAACATGACTTTTGCTAC+AGG + chr7_2:75480021-75480040 Msa1076930:intron 30.0%
ATCCAAAGACATTACAGAAA+AGG + chr7_2:75480075-75480094 Msa1076930:CDS 30.0%
!! GATTTTTAGGGAATACAATG+AGG + chr7_2:75480244-75480263 Msa1076930:CDS 30.0%
GAAGAGAAAATGGAAGAAAA+TGG - chr7_2:75480294-75480313 None:intergenic 30.0%
CAACAAAAGAGAAGAGAAAA+TGG - chr7_2:75480304-75480323 None:intergenic 30.0%
!! ACATAGTATAGAAGTGTCTA+TGG - chr7_2:75480368-75480387 None:intergenic 30.0%
AGTTATCCAAAAACCTTTGA+TGG + chr7_2:75480452-75480471 Msa1076930:intron 30.0%
TTATATACACAACCACTGAT+GGG - chr7_2:75480481-75480500 None:intergenic 30.0%
ATTATATACACAACCACTGA+TGG - chr7_2:75480482-75480501 None:intergenic 30.0%
CATGCATTCTCTGTTAATAT+CGG + chr7_2:75480507-75480526 Msa1076930:intron 30.0%
ATTTATGAGTGACCACATTA+TGG + chr7_2:75480689-75480708 Msa1076930:intron 30.0%
ACTAGAATAACACCATAATG+TGG - chr7_2:75480704-75480723 None:intergenic 30.0%
! GCTATTGTTTGGTAGTATAA+AGG - chr7_2:75480856-75480875 None:intergenic 30.0%
CACAAGTTATTGATAAGCTT+TGG - chr7_2:75481007-75481026 None:intergenic 30.0%
ATGATAGATATGATAGGTGT+AGG - chr7_2:75481105-75481124 None:intergenic 30.0%
ATCAACAGAAGTTCATTACA+TGG - chr7_2:75481212-75481231 None:intergenic 30.0%
TTACTGAGTTCATAATGTCA+TGG + chr7_2:75481234-75481253 Msa1076930:intron 30.0%
TATCATTGCAGATATTTGGT+CGG + chr7_2:75481292-75481311 Msa1076930:intron 30.0%
! TGAATTTGAAACCTTATTCC+AGG + chr7_2:75481488-75481507 Msa1076930:CDS 30.0%
! TGCTCATGTTTTTCTTTGTA+TGG + chr7_2:75481609-75481628 Msa1076930:intron 30.0%
GATTTCACTGTAAATGTTGA+AGG + chr7_2:75481825-75481844 Msa1076930:CDS 30.0%
! ATATTTTCTGCCATAAGCTA+TGG - chr7_2:75481952-75481971 None:intergenic 30.0%
ACAATGTTTATACTCTCAGT+TGG + chr7_2:75482288-75482307 Msa1076930:intron 30.0%
TAGTACCAATCAAGAAGATA+GGG - chr7_2:75482714-75482733 None:intergenic 30.0%
!! GTTATTCCATATGGTTCTAA+TGG - chr7_2:75482774-75482793 None:intergenic 30.0%
TAACGTTCTGTTATTCCATA+TGG - chr7_2:75482783-75482802 None:intergenic 30.0%
! ATGACAAGTTTTCTGATAGA+GGG + chr7_2:75483081-75483100 Msa1076930:CDS 30.0%
AAACAAAAAATGTGGGAAAG+GGG - chr7_2:75483296-75483315 None:intergenic 30.0%
CAAACAAAAAATGTGGGAAA+GGG - chr7_2:75483297-75483316 None:intergenic 30.0%
TTCCAGATAACAATTAGAGA+GGG - chr7_2:75483371-75483390 None:intergenic 30.0%
TTTCCAGATAACAATTAGAG+AGG - chr7_2:75483372-75483391 None:intergenic 30.0%
TATATAGATTCATTGGTGTG+AGG + chr7_2:75483407-75483426 Msa1076930:three_prime_UTR 30.0%
TTATAAAGTTTGCGTTCGGA+AGG - chr7_2:75477263-75477282 None:intergenic 35.0%
! TTTGCACAGAAATTTTGCCT+CGG - chr7_2:75477899-75477918 None:intergenic 35.0%
! ACAACTTTTCTCTCATGATC+AGG + chr7_2:75478226-75478245 Msa1076930:five_prime_UTR 35.0%
! TTTTCTCTCATGATCAGGTA+TGG + chr7_2:75478231-75478250 Msa1076930:intron 35.0%
! CAGGTATGGTTTTCATTAAC+CGG + chr7_2:75478245-75478264 Msa1076930:intron 35.0%
TCATTAACCGGTAGAAATCT+TGG + chr7_2:75478257-75478276 Msa1076930:intron 35.0%
ATCTAGACCAAGATTTCTAC+CGG - chr7_2:75478267-75478286 None:intergenic 35.0%
!! GTTTATTTGGGTTGCCAAAT+AGG + chr7_2:75478408-75478427 Msa1076930:intron 35.0%
!! GAACCTTGTTATAACCGTTT+TGG + chr7_2:75478521-75478540 Msa1076930:intron 35.0%
AGACCAAAACGGTTATAACA+AGG - chr7_2:75478527-75478546 None:intergenic 35.0%
!! GTTATAACCGTTTTGGTCTT+TGG + chr7_2:75478528-75478547 Msa1076930:five_prime_UTR 35.0%
!! TATAACCGTTTTGGTCTTTG+GGG + chr7_2:75478530-75478549 Msa1076930:five_prime_UTR 35.0%
TGTTCACAGACACTAATAGT+AGG - chr7_2:75478575-75478594 None:intergenic 35.0%
TTTACTTCATGATGATTCGC+CGG + chr7_2:75478675-75478694 Msa1076930:CDS 35.0%
TCGAATTGTCTAATTACGGA+AGG + chr7_2:75478701-75478720 Msa1076930:CDS 35.0%
CATATACACTTTCTCCATTG+AGG - chr7_2:75478762-75478781 None:intergenic 35.0%
! TGTAGAACCAATTGCTGATT+TGG + chr7_2:75478780-75478799 Msa1076930:CDS 35.0%
AAGAGATCCAAATCAGCAAT+TGG - chr7_2:75478790-75478809 None:intergenic 35.0%
TATGGTTACTACTGTGAGAA+AGG + chr7_2:75478823-75478842 Msa1076930:CDS 35.0%
ATGGTTACTACTGTGAGAAA+GGG + chr7_2:75478824-75478843 Msa1076930:CDS 35.0%
GATTGTTGAACTTCTAAGTC+TGG + chr7_2:75478870-75478889 Msa1076930:CDS 35.0%
TTGTTGAACTTCTAAGTCTG+GGG + chr7_2:75478872-75478891 Msa1076930:CDS 35.0%
!!! TGGGGATTTTTTCCTTCTAT+TGG + chr7_2:75479076-75479095 Msa1076930:CDS 35.0%
CTAAAATGCATTGAAGCAGT+TGG + chr7_2:75479199-75479218 Msa1076930:intron 35.0%
AGACAAAAACATGTGAACTG+TGG - chr7_2:75479233-75479252 None:intergenic 35.0%
ATGAAATTCAAACTATGCCC+TGG + chr7_2:75479292-75479311 Msa1076930:CDS 35.0%
TGAAATTCAAACTATGCCCT+GGG + chr7_2:75479293-75479312 Msa1076930:CDS 35.0%
CAGTCTCATGACTATATCAT+GGG - chr7_2:75479388-75479407 None:intergenic 35.0%
TCAGTCTCATGACTATATCA+TGG - chr7_2:75479389-75479408 None:intergenic 35.0%
ATATAGTCATGAGACTGATG+CGG + chr7_2:75479391-75479410 Msa1076930:CDS 35.0%
CTTAATTGGAATGCTCAACA+AGG + chr7_2:75479425-75479444 Msa1076930:CDS 35.0%
TCAGGACTAGATTGAACTTT+CGG - chr7_2:75479495-75479514 None:intergenic 35.0%
AAAGTTCAATCTAGTCCTGA+TGG + chr7_2:75479495-75479514 Msa1076930:CDS 35.0%
! CCCTTGAATGGACTTTAAAT+TGG + chr7_2:75479547-75479566 Msa1076930:CDS 35.0%
TCCTACATAGCATGTTTGAT+TGG + chr7_2:75479574-75479593 Msa1076930:CDS 35.0%
ACCAATCAAACATGCTATGT+AGG - chr7_2:75479578-75479597 None:intergenic 35.0%
CACTCTGATTGTACAACTAA+AGG - chr7_2:75479622-75479641 None:intergenic 35.0%
! CGGTTTGTTTGTTTGTTTGA+AGG + chr7_2:75479742-75479761 Msa1076930:intron 35.0%
! CATCCTTATATAAGGTACCA+TGG - chr7_2:75479790-75479809 None:intergenic 35.0%
! AGCCTTTTCTGTAATGTCTT+TGG - chr7_2:75480080-75480099 None:intergenic 35.0%
GACATTACAGAAAAGGCTTA+TGG + chr7_2:75480082-75480101 Msa1076930:CDS 35.0%
AGAAAAGGCTTATGGTAGTT+GGG + chr7_2:75480090-75480109 Msa1076930:CDS 35.0%
AGCATGAATATGACAAGGAA+TGG - chr7_2:75480137-75480156 None:intergenic 35.0%
ATTCCTTGTCATATTCATGC+TGG + chr7_2:75480136-75480155 Msa1076930:CDS 35.0%
!! ACTTGTCTAGGTGGATTTTT+AGG + chr7_2:75480231-75480250 Msa1076930:CDS 35.0%
!! CTTGTCTAGGTGGATTTTTA+GGG + chr7_2:75480232-75480251 Msa1076930:CDS 35.0%
!!! CTTCTCTTTTGTTGCTTTCA+TGG + chr7_2:75480310-75480329 Msa1076930:intron 35.0%
TATCCAAAAACCTTTGATGG+AGG + chr7_2:75480455-75480474 Msa1076930:intron 35.0%
ATTAACAGAGAATGCATGGA+TGG - chr7_2:75480505-75480524 None:intergenic 35.0%
CGATATTAACAGAGAATGCA+TGG - chr7_2:75480509-75480528 None:intergenic 35.0%
TTCTAGTCACCTAGCATTAA+CGG + chr7_2:75480717-75480736 Msa1076930:intron 35.0%
AAGAATAAGCCGTTAATGCT+AGG - chr7_2:75480729-75480748 None:intergenic 35.0%
AATGTCATATGCAACCTACA+TGG - chr7_2:75480878-75480897 None:intergenic 35.0%
! TTCATATCTTTTGTATCCGG+TGG + chr7_2:75481132-75481151 Msa1076930:CDS 35.0%
!! TATTTGGTCGGAACTTGTTT+TGG + chr7_2:75481304-75481323 Msa1076930:CDS 35.0%
!!! TTTTGGTATGCTGCTGTTTT+TGG + chr7_2:75481321-75481340 Msa1076930:CDS 35.0%
GAACTATAACTGCTATTAGC+CGG + chr7_2:75481343-75481362 Msa1076930:CDS 35.0%
AACTATAACTGCTATTAGCC+GGG + chr7_2:75481344-75481363 Msa1076930:CDS 35.0%
CACATTATATGCCAAAGAGA+TGG + chr7_2:75481433-75481452 Msa1076930:CDS 35.0%
AAGAAAAACATGAGCACGAA+AGG - chr7_2:75481605-75481624 None:intergenic 35.0%
! TACAGCAATGATGTTACTTG+AGG + chr7_2:75481639-75481658 Msa1076930:CDS 35.0%
! AATGATGTTACTTGAGGAGA+TGG + chr7_2:75481645-75481664 Msa1076930:CDS 35.0%
ACAGAAGTAAATATGGAGTG+AGG - chr7_2:75481681-75481700 None:intergenic 35.0%
ACTTCTGTTTATTGTCCCAA+AGG + chr7_2:75481693-75481712 Msa1076930:CDS 35.0%
CAAGTACGAAAATGACCTTT+GGG - chr7_2:75481711-75481730 None:intergenic 35.0%
CTGTGAAATGCAGTATACTT+GGG - chr7_2:75481751-75481770 None:intergenic 35.0%
ACTGTGAAATGCAGTATACT+TGG - chr7_2:75481752-75481771 None:intergenic 35.0%
! ACTGTAAATGTTGAAGGTGT+TGG + chr7_2:75481831-75481850 Msa1076930:CDS 35.0%
!! CTGTAAATGTTGAAGGTGTT+GGG + chr7_2:75481832-75481851 Msa1076930:CDS 35.0%
GTACATCTGTAACATTCTCT+AGG + chr7_2:75481903-75481922 Msa1076930:intron 35.0%
TGTCTCAATTCCATAGCTTA+TGG + chr7_2:75481939-75481958 Msa1076930:intron 35.0%
!! ACCTTTGATTTTCAAGAGCA+TGG + chr7_2:75482007-75482026 Msa1076930:CDS 35.0%
TCCATGCTCTTGAAAATCAA+AGG - chr7_2:75482011-75482030 None:intergenic 35.0%
AGATGGAGAAATCATTGTTG+AGG + chr7_2:75482089-75482108 Msa1076930:CDS 35.0%
GAGAAATCATTGTTGAGGTA+TGG + chr7_2:75482094-75482113 Msa1076930:intron 35.0%
TCTGAGAAAAGAGTTGACTA+TGG - chr7_2:75482340-75482359 None:intergenic 35.0%
TTCAGAGTAGTTATCCATCA+TGG + chr7_2:75482448-75482467 Msa1076930:CDS 35.0%
TCAGAGTAGTTATCCATCAT+GGG + chr7_2:75482449-75482468 Msa1076930:CDS 35.0%
ATCTTAGAACATTCAGAGAG+CGG + chr7_2:75482505-75482524 Msa1076930:CDS 35.0%
ACAGAAACAGGTTTATATCC+AGG + chr7_2:75482610-75482629 Msa1076930:CDS 35.0%
CAGAAACAGGTTTATATCCA+GGG + chr7_2:75482611-75482630 Msa1076930:CDS 35.0%
AGTACCAATCAAGAAGATAG+GGG - chr7_2:75482713-75482732 None:intergenic 35.0%
GTAGTACCAATCAAGAAGAT+AGG - chr7_2:75482715-75482734 None:intergenic 35.0%
GATGTTCCATTAGAACCATA+TGG + chr7_2:75482765-75482784 Msa1076930:CDS 35.0%
ATACTCAAATGAGTATCACG+AGG + chr7_2:75482860-75482879 Msa1076930:CDS 35.0%
GTTGTTTGGTCATTGAAATC+TGG - chr7_2:75483050-75483069 None:intergenic 35.0%
! CATGACAAGTTTTCTGATAG+AGG + chr7_2:75483080-75483099 Msa1076930:CDS 35.0%
! ACCAAGAACAACACTTTTAC+TGG + chr7_2:75483117-75483136 Msa1076930:CDS 35.0%
!! TCCAGTAAAAGTGTTGTTCT+TGG - chr7_2:75483121-75483140 None:intergenic 35.0%
AACAATGACAGATGACTTAG+AGG + chr7_2:75483169-75483188 Msa1076930:CDS 35.0%
! GAATTTATAGTGGGAGTTTC+TGG - chr7_2:75483239-75483258 None:intergenic 35.0%
CCAAACAAAAAATGTGGGAA+AGG - chr7_2:75483298-75483317 None:intergenic 35.0%
!!! CCTTTCCCACATTTTTTGTT+TGG + chr7_2:75483295-75483314 Msa1076930:three_prime_UTR 35.0%
!!! TCCCACATTTTTTGTTTGGA+AGG + chr7_2:75483299-75483318 Msa1076930:three_prime_UTR 35.0%
CCCTTCCAAACAAAAAATGT+GGG - chr7_2:75483303-75483322 None:intergenic 35.0%
!!! CCCACATTTTTTGTTTGGAA+GGG + chr7_2:75483300-75483319 Msa1076930:three_prime_UTR 35.0%
ACCCTTCCAAACAAAAAATG+TGG - chr7_2:75483304-75483323 None:intergenic 35.0%
!! GAAGGGTGCTTTCAATTAAA+TGG + chr7_2:75483317-75483336 Msa1076930:three_prime_UTR 35.0%
! AGGAGATGAGCATAGGTTTT+TGG - chr7_2:75477243-75477262 None:intergenic 40.0%
AGATGATGAAACAGTAGCGA+AGG - chr7_2:75477427-75477446 None:intergenic 40.0%
GAGACACAAATACAGAAACG+TGG - chr7_2:75477553-75477572 None:intergenic 40.0%
! TCCATTGGGTTGTTCCAAAT+TGG + chr7_2:75478024-75478043 Msa1076930:intron 40.0%
CAAATATGGGCAACTTGACA+AGG - chr7_2:75478347-75478366 None:intergenic 40.0%
! CTTGTCAAGTTGCCCATATT+TGG + chr7_2:75478345-75478364 Msa1076930:intron 40.0%
ATGAATCGCCAGCCAAATAT+GGG - chr7_2:75478360-75478379 None:intergenic 40.0%
TATGAATCGCCAGCCAAATA+TGG - chr7_2:75478361-75478380 None:intergenic 40.0%
ACAATGTTTAGCAGACCAAG+TGG + chr7_2:75478592-75478611 Msa1076930:exon 40.0%
CTCCATTGAGGAAATCTGAA+GGG - chr7_2:75478750-75478769 None:intergenic 40.0%
TCTCCATTGAGGAAATCTGA+AGG - chr7_2:75478751-75478770 None:intergenic 40.0%
ACTACTGTGAGAAAGGGTTA+TGG + chr7_2:75478830-75478849 Msa1076930:CDS 40.0%
! CCATCCCACATTTTGCATTA+CGG - chr7_2:75478951-75478970 None:intergenic 40.0%
TAAGTGTGAGTGGGGTTAAA+GGG - chr7_2:75479032-75479051 None:intergenic 40.0%
!! TAGCTTTGGTAAGTGTGAGT+GGG - chr7_2:75479041-75479060 None:intergenic 40.0%
!! ATAGCTTTGGTAAGTGTGAG+TGG - chr7_2:75479042-75479061 None:intergenic 40.0%
TTAGTTGAGCAAAGAATCGC+AGG - chr7_2:75479113-75479132 None:intergenic 40.0%
GCGATTCTTTGCTCAACTAA+AGG + chr7_2:75479113-75479132 Msa1076930:CDS 40.0%
CTTACCTGCTGTAGAAAAAC+TGG - chr7_2:75479155-75479174 None:intergenic 40.0%
!! TTGTCAACAATTTTGGCCCA+GGG - chr7_2:75479312-75479331 None:intergenic 40.0%
!! TTTGTCAACAATTTTGGCCC+AGG - chr7_2:75479313-75479332 None:intergenic 40.0%
CGGAAGGAGAACTACTTAAT+TGG + chr7_2:75479411-75479430 Msa1076930:CDS 40.0%
TTGCTTTCCCCATTTCACAA+TGG + chr7_2:75479454-75479473 Msa1076930:CDS 40.0%
CTGGAAACCATTGTGAAATG+GGG - chr7_2:75479464-75479483 None:intergenic 40.0%
CCTGGAAACCATTGTGAAAT+GGG - chr7_2:75479465-75479484 None:intergenic 40.0%
ACCTGGAAACCATTGTGAAA+TGG - chr7_2:75479466-75479485 None:intergenic 40.0%
CAGGACTAGATTGAACTTTC+GGG - chr7_2:75479494-75479513 None:intergenic 40.0%
AAACGATATTGTGCTCCATC+AGG - chr7_2:75479513-75479532 None:intergenic 40.0%
TACTTACCAAGACCCTTGAA+TGG + chr7_2:75479535-75479554 Msa1076930:CDS 40.0%
TAAAGTCCATTCAAGGGTCT+TGG - chr7_2:75479544-75479563 None:intergenic 40.0%
AGGACTATTTAGATGCTCCA+TGG + chr7_2:75479770-75479789 Msa1076930:intron 40.0%
GCTCCATGGTACCTTATATA+AGG + chr7_2:75479784-75479803 Msa1076930:intron 40.0%
! ACAGGAACTTTTGTGTCAGA+AGG + chr7_2:75480039-75480058 Msa1076930:intron 40.0%
! CAGGAACTTTTGTGTCAGAA+GGG + chr7_2:75480040-75480059 Msa1076930:intron 40.0%
CAGAAAAGGCTTATGGTAGT+TGG + chr7_2:75480089-75480108 Msa1076930:CDS 40.0%
ATGCCAGCATGAATATGACA+AGG - chr7_2:75480142-75480161 None:intergenic 40.0%
GAAGATGGTCAAACTTGTCT+AGG + chr7_2:75480219-75480238 Msa1076930:CDS 40.0%
CTACCAAACAATAGCCATGT+AGG + chr7_2:75480861-75480880 Msa1076930:intron 40.0%
CAACCTACATGGCTATTGTT+TGG - chr7_2:75480867-75480886 None:intergenic 40.0%
TATATGTCTTCTGCTGTACC+TGG + chr7_2:75480935-75480954 Msa1076930:intron 40.0%
AATGTCATGGCAGTCGTTAA+AGG + chr7_2:75481247-75481266 Msa1076930:intron 40.0%
ACCATAGATATTGTTCCCTC+GGG - chr7_2:75481402-75481421 None:intergenic 40.0%
CACCATAGATATTGTTCCCT+CGG - chr7_2:75481403-75481422 None:intergenic 40.0%
TGGCAAAGAAATTACTGACG+TGG + chr7_2:75481458-75481477 Msa1076930:CDS 40.0%
TTATTCCAGGTATTCTGCCT+GGG + chr7_2:75481501-75481520 Msa1076930:intron 40.0%
CCAAGTACGAAAATGACCTT+TGG - chr7_2:75481712-75481731 None:intergenic 40.0%
!! CCAAAGGTCATTTTCGTACT+TGG + chr7_2:75481709-75481728 Msa1076930:intron 40.0%
GAGCATGGAAACTCTCATTA+TGG + chr7_2:75482022-75482041 Msa1076930:CDS 40.0%
!! TGCTACGAGAGGCATTATAT+GGG - chr7_2:75482051-75482070 None:intergenic 40.0%
TCATTGTTGAGGTATGGTCT+TGG + chr7_2:75482100-75482119 Msa1076930:intron 40.0%
! TAAAAAGCATGCACACACAG+AGG - chr7_2:75482243-75482262 None:intergenic 40.0%
! TGAGTATTTGGTTCCCATGA+TGG - chr7_2:75482465-75482484 None:intergenic 40.0%
ATCATGGGAACCAAATACTC+AGG + chr7_2:75482464-75482483 Msa1076930:CDS 40.0%
TCATGGGAACCAAATACTCA+GGG + chr7_2:75482465-75482484 Msa1076930:CDS 40.0%
! TTTTGCAACTGGCAATCACT+TGG + chr7_2:75482650-75482669 Msa1076930:CDS 40.0%
ATAGGGGTGATTATTCTGGT+TGG - chr7_2:75482697-75482716 None:intergenic 40.0%
GAAGATAGGGGTGATTATTC+TGG - chr7_2:75482701-75482720 None:intergenic 40.0%
ATCACCCCTATCTTCTTGAT+TGG + chr7_2:75482706-75482725 Msa1076930:CDS 40.0%
!! TCATTCTGTGTCAAGTTGGA+AGG - chr7_2:75482825-75482844 None:intergenic 40.0%
CAAATGAGTATCACGAGGAT+CGG + chr7_2:75482865-75482884 Msa1076930:CDS 40.0%
AAATGAGTATCACGAGGATC+GGG + chr7_2:75482866-75482885 Msa1076930:CDS 40.0%
GTTTGGTCATTGAAATCTGG+AGG - chr7_2:75483047-75483066 None:intergenic 40.0%
! TTTATAGTGGGAGTTTCTGG+AGG - chr7_2:75483236-75483255 None:intergenic 40.0%
! GCAGTGCTGGAATTTATAGT+GGG - chr7_2:75483248-75483267 None:intergenic 40.0%
! AGCAGTGCTGGAATTTATAG+TGG - chr7_2:75483249-75483268 None:intergenic 40.0%
GTCCCTCTCTAATTGTTATC+TGG + chr7_2:75483366-75483385 Msa1076930:three_prime_UTR 40.0%
AATGAACCTCAGCTTGATGT+TGG + chr7_2:75483441-75483460 Msa1076930:three_prime_UTR 40.0%
TAAGTTCCAACATCAAGCTG+AGG - chr7_2:75483450-75483469 None:intergenic 40.0%
TCCTTGCATCTGAAAATGGA+AGG - chr7_2:75483490-75483509 None:intergenic 40.0%
GATGAAACAGTAGCGAAGGA+AGG - chr7_2:75477423-75477442 None:intergenic 45.0%
GAATTGAAGTTAGCAGTCCG+AGG + chr7_2:75477879-75477898 Msa1076930:intron 45.0%
! GCCAATTTGGAACAACCCAA+TGG - chr7_2:75478028-75478047 None:intergenic 45.0%
! TCAAGTTGCCCATATTTGGC+TGG + chr7_2:75478349-75478368 Msa1076930:intron 45.0%
CCATTCCCCAAAGACCAAAA+CGG - chr7_2:75478538-75478557 None:intergenic 45.0%
! TTGGTCTTTGGGGAATGGAT+TGG + chr7_2:75478540-75478559 Msa1076930:five_prime_UTR 45.0%
TTTAGCAGACCAAGTGGTTC+CGG + chr7_2:75478598-75478617 Msa1076930:CDS 45.0%
AGCCCTTCAGATTTCCTCAA+TGG + chr7_2:75478745-75478764 Msa1076930:CDS 45.0%
! GGGTTCACCATATGCTTTTC+AGG + chr7_2:75478892-75478911 Msa1076930:CDS 45.0%
GGCTCCGTAATGCAAAATGT+GGG + chr7_2:75478944-75478963 Msa1076930:CDS 45.0%
CCGTAATGCAAAATGTGGGA+TGG + chr7_2:75478948-75478967 Msa1076930:CDS 45.0%
GGAATTAAGCCCTGTGATCT+TGG + chr7_2:75478985-75479004 Msa1076930:CDS 45.0%
GCTTCTTTGCCAAGATCACA+GGG - chr7_2:75478997-75479016 None:intergenic 45.0%
AGCTTCTTTGCCAAGATCAC+AGG - chr7_2:75478998-75479017 None:intergenic 45.0%
GTAAGTGTGAGTGGGGTTAA+AGG - chr7_2:75479033-75479052 None:intergenic 45.0%
! AGCTTTGGTAAGTGTGAGTG+GGG - chr7_2:75479040-75479059 None:intergenic 45.0%
ACCTGCTGTAGAAAAACTGG+CGG - chr7_2:75479152-75479171 None:intergenic 45.0%
TCGGAAACTATGTGTGCTGA+AGG + chr7_2:75479353-75479372 Msa1076930:CDS 45.0%
CCCATTTCACAATGGTTTCC+AGG + chr7_2:75479462-75479481 Msa1076930:CDS 45.0%
TGCTGGCATATCTCTTTCTG+AGG + chr7_2:75480153-75480172 Msa1076930:CDS 45.0%
TTCGAGATGATGCTGTGCTT+GGG - chr7_2:75480202-75480221 None:intergenic 45.0%
GATGGTCAAACTTGTCTAGG+TGG + chr7_2:75480222-75480241 Msa1076930:CDS 45.0%
TATAGGTCGACCATCTCTTC+AGG + chr7_2:75481028-75481047 Msa1076930:intron 45.0%
TAATCCGATGCCTGAAGAGA+TGG - chr7_2:75481041-75481060 None:intergenic 45.0%
TGCAATTGCAGATGAGCTTC+TGG + chr7_2:75481368-75481387 Msa1076930:CDS 45.0%
TCCCGAGGGAACAATATCTA+TGG + chr7_2:75481398-75481417 Msa1076930:CDS 45.0%
CGAGGGAACAATATCTATGG+TGG + chr7_2:75481401-75481420 Msa1076930:CDS 45.0%
TATATGCCAAAGAGATGGCG+TGG + chr7_2:75481438-75481457 Msa1076930:CDS 45.0%
CAGGCAGAATACCTGGAATA+AGG - chr7_2:75481502-75481521 None:intergenic 45.0%
CTTATTCCAGGTATTCTGCC+TGG + chr7_2:75481500-75481519 Msa1076930:intron 45.0%
TATTCCAGGTATTCTGCCTG+GGG + chr7_2:75481502-75481521 Msa1076930:intron 45.0%
!! GCTACGAGAGGCATTATATG+GGG - chr7_2:75482050-75482069 None:intergenic 45.0%
!! CTGCTACGAGAGGCATTATA+TGG - chr7_2:75482052-75482071 None:intergenic 45.0%
ATAATGCCTCTCGTAGCAGA+AGG + chr7_2:75482053-75482072 Msa1076930:CDS 45.0%
AAGGAGTTCACAGGGAAAGA+TGG + chr7_2:75482072-75482091 Msa1076930:CDS 45.0%
CATGGGAACCAAATACTCAG+GGG + chr7_2:75482466-75482485 Msa1076930:CDS 45.0%
AACTGCTTCCCCTGAGTATT+TGG - chr7_2:75482477-75482496 None:intergenic 45.0%
GAGCGGAAGTTATCAGTACA+TGG + chr7_2:75482522-75482541 Msa1076930:CDS 45.0%
!! CCAGTTGCAAAAGTGCTGTA+TGG - chr7_2:75482642-75482661 None:intergenic 45.0%
! CCATACAGCACTTTTGCAAC+TGG + chr7_2:75482639-75482658 Msa1076930:CDS 45.0%
GCAATCACTTGGATTCGTTG+TGG + chr7_2:75482661-75482680 Msa1076930:CDS 45.0%
TCTCTTGAAGCTGCATCATG+AGG - chr7_2:75482747-75482766 None:intergenic 45.0%
GGGTTCATTCTGTGTCAAGT+TGG - chr7_2:75482829-75482848 None:intergenic 45.0%
CTAAAGCTCTCCCTAAGGAT+GGG - chr7_2:75482924-75482943 None:intergenic 45.0%
ACTAAAGCTCTCCCTAAGGA+TGG - chr7_2:75482925-75482944 None:intergenic 45.0%
! GTTTTCTGATAGAGGGTCAG+AGG + chr7_2:75483088-75483107 Msa1076930:CDS 45.0%
ATGACAGATGACTTAGAGGC+AGG + chr7_2:75483173-75483192 Msa1076930:CDS 45.0%
TACTCAAAAGCTAGCAGTGC+TGG - chr7_2:75483261-75483280 None:intergenic 45.0%
AGAGAGGGACAATCATGACT+TGG - chr7_2:75483356-75483375 None:intergenic 45.0%
! GCCTTCCATTTTCAGATGCA+AGG + chr7_2:75483486-75483505 Msa1076930:three_prime_UTR 45.0%
GTTCGGAAGGAGATGAGCAT+AGG - chr7_2:75477250-75477269 None:intergenic 50.0%
TTAGGTTCAGCTCACCCCTT+TGG + chr7_2:75478180-75478199 Msa1076930:intron 50.0%
TAGGTTCAGCTCACCCCTTT+GGG + chr7_2:75478181-75478200 Msa1076930:intron 50.0%
TCAACGCCAAAGTCCCAAAG+GGG - chr7_2:75478197-75478216 None:intergenic 50.0%
GTCAACGCCAAAGTCCCAAA+GGG - chr7_2:75478198-75478217 None:intergenic 50.0%
TGTCAACGCCAAAGTCCCAA+AGG - chr7_2:75478199-75478218 None:intergenic 50.0%
!! CCGTTTTGGTCTTTGGGGAA+TGG + chr7_2:75478535-75478554 Msa1076930:five_prime_UTR 50.0%
!! CTAAAAGCACCGGAACCACT+TGG - chr7_2:75478610-75478629 None:intergenic 50.0%
GGGCTCCGTAATGCAAAATG+TGG + chr7_2:75478943-75478962 Msa1076930:CDS 50.0%
GGGATGGATGCTGTTGAATC+TGG + chr7_2:75478964-75478983 Msa1076930:CDS 50.0%
! TCCGCCAGTTTTTCTACAGC+AGG + chr7_2:75479148-75479167 Msa1076930:CDS 50.0%
AGTCATGAGACTGATGCGGA+AGG + chr7_2:75479395-75479414 Msa1076930:CDS 50.0%
TCACAATGGTTTCCAGGTGC+TGG + chr7_2:75479468-75479487 Msa1076930:CDS 50.0%
CTTCGAGATGATGCTGTGCT+TGG - chr7_2:75480203-75480222 None:intergenic 50.0%
GCACAGCATCATCTCGAAGA+TGG + chr7_2:75480204-75480223 Msa1076930:CDS 50.0%
! GGGCCTCCATCAAAGGTTTT+TGG - chr7_2:75480461-75480480 None:intergenic 50.0%
TCGACCATCTCTTCAGGCAT+CGG + chr7_2:75481034-75481053 Msa1076930:CDS 50.0%
CAGAATTGCAGCAAAGCCAC+CGG - chr7_2:75481151-75481170 None:intergenic 50.0%
!! CTTCTGGTCTTAGATCCCGA+GGG + chr7_2:75481384-75481403 Msa1076930:CDS 50.0%
TCTTTGCCACGCCATCTCTT+TGG - chr7_2:75481447-75481466 None:intergenic 50.0%
! ATGTATTGATCGGACACCCC+AGG - chr7_2:75481521-75481540 None:intergenic 50.0%
!! AAGGTGTTGGGCATGTTTGC+AGG + chr7_2:75481844-75481863 Msa1076930:CDS 50.0%
GGCATGTTTGCAGGTTAGCA+TGG + chr7_2:75481853-75481872 Msa1076930:intron 50.0%
TGAACTCCTTCTGCTACGAG+AGG - chr7_2:75482062-75482081 None:intergenic 50.0%
TCGTAGCAGAAGGAGTTCAC+AGG + chr7_2:75482063-75482082 Msa1076930:CDS 50.0%
CGTAGCAGAAGGAGTTCACA+GGG + chr7_2:75482064-75482083 Msa1076930:CDS 50.0%
CATCTTCCCCTCCTAGAATG+TGG + chr7_2:75482556-75482575 Msa1076930:CDS 50.0%
TTCCCCTCCTAGAATGTGGA+GGG + chr7_2:75482560-75482579 Msa1076930:CDS 50.0%
! TACCCCTCCACATTCTAGGA+GGG - chr7_2:75482566-75482585 None:intergenic 50.0%
TCTTCATCCCCTGCCGTATT+GGG - chr7_2:75482591-75482610 None:intergenic 50.0%
CAGGGGATGAAGACAGAAAC+AGG + chr7_2:75482598-75482617 Msa1076930:CDS 50.0%
AGTGCTGTATGGCATTTCCC+TGG - chr7_2:75482631-75482650 None:intergenic 50.0%
!! GGAAGGCATCGAATAGTCTC+TGG - chr7_2:75482808-75482827 None:intergenic 50.0%
ATCGGGCTGCATCTCAACTT+GGG + chr7_2:75482883-75482902 Msa1076930:CDS 50.0%
CTCATCAGCTCCCATCCTTA+GGG + chr7_2:75482911-75482930 Msa1076930:CDS 50.0%
CCTGACTAAAGCTCTCCCTA+AGG - chr7_2:75482929-75482948 None:intergenic 50.0%
! CCTTAGGGAGAGCTTTAGTC+AGG + chr7_2:75482926-75482945 Msa1076930:CDS 50.0%
TTCTAGCCCACCAATGGCTT+CGG - chr7_2:75482983-75483002 None:intergenic 50.0%
GGGGTCCTTGCATCTGAAAA+TGG - chr7_2:75483494-75483513 None:intergenic 50.0%
AGGACCCCAGCAAAATAGTC+TGG + chr7_2:75483506-75483525 Msa1076930:three_prime_UTR 50.0%
!! AGCTCACCCCTTTGGGACTT+TGG + chr7_2:75478188-75478207 Msa1076930:five_prime_UTR 55.0%
GGCGCGTCATCTTTGACTAG+AGG + chr7_2:75478652-75478671 Msa1076930:CDS 55.0%
TACGGAAGGATCCCAAGTCC+AGG + chr7_2:75478715-75478734 Msa1076930:CDS 55.0%
GGCTCTCACTTCCTGGACTT+GGG - chr7_2:75478729-75478748 None:intergenic 55.0%
TCTGAAGGGCTCTCACTTCC+TGG - chr7_2:75478736-75478755 None:intergenic 55.0%
! CACTGATGGGCCTCCATCAA+AGG - chr7_2:75480468-75480487 None:intergenic 55.0%
CTTTGATGGAGGCCCATCAG+TGG + chr7_2:75480466-75480485 Msa1076930:intron 55.0%
GCTCATCTGCAATTGCAGCC+CGG - chr7_2:75481365-75481384 None:intergenic 55.0%
!! GCTTCTGGTCTTAGATCCCG+AGG + chr7_2:75481383-75481402 Msa1076930:CDS 55.0%
CTTCCCCTCCTAGAATGTGG+AGG + chr7_2:75482559-75482578 Msa1076930:CDS 55.0%
TCCCCTCCTAGAATGTGGAG+GGG + chr7_2:75482561-75482580 Msa1076930:CDS 55.0%
! ACCCCTCCACATTCTAGGAG+GGG - chr7_2:75482565-75482584 None:intergenic 55.0%
CTACCCCTCCACATTCTAGG+AGG - chr7_2:75482567-75482586 None:intergenic 55.0%
GGACTACCCCTCCACATTCT+AGG - chr7_2:75482570-75482589 None:intergenic 55.0%
GTGGAGGGGTAGTCCCAATA+CGG + chr7_2:75482575-75482594 Msa1076930:CDS 55.0%
GTCTTCATCCCCTGCCGTAT+TGG - chr7_2:75482592-75482611 None:intergenic 55.0%
GATCGGGCTGCATCTCAACT+TGG + chr7_2:75482882-75482901 Msa1076930:CDS 55.0%
TCGGGCTGCATCTCAACTTG+GGG + chr7_2:75482884-75482903 Msa1076930:CDS 55.0%
CCTAAGGATGGGAGCTGATG+AGG - chr7_2:75482913-75482932 None:intergenic 55.0%
CCTCATCAGCTCCCATCCTT+AGG + chr7_2:75482910-75482929 Msa1076930:CDS 55.0%
!! CAATGGCTTCGGGTTGTGTG+GGG - chr7_2:75482972-75482991 None:intergenic 55.0%
!! CCAATGGCTTCGGGTTGTGT+GGG - chr7_2:75482973-75482992 None:intergenic 55.0%
!! ACCAATGGCTTCGGGTTGTG+TGG - chr7_2:75482974-75482993 None:intergenic 55.0%
ACACAACCCGAAGCCATTGG+TGG + chr7_2:75482973-75482992 Msa1076930:CDS 55.0%
CACAACCCGAAGCCATTGGT+GGG + chr7_2:75482974-75482993 Msa1076930:CDS 55.0%
TCTAGCCCACCAATGGCTTC+GGG - chr7_2:75482982-75483001 None:intergenic 55.0%
GACGACTTCTAGCCCACCAA+TGG - chr7_2:75482989-75483008 None:intergenic 55.0%
!! GGTGGGCTAGAAGTCGTCTA+CGG + chr7_2:75482991-75483010 Msa1076930:CDS 55.0%
GCTAGAAGTCGTCTACGGAG+TGG + chr7_2:75482996-75483015 Msa1076930:CDS 55.0%
TCTACGGAGTGGACAAGCTC+AGG + chr7_2:75483007-75483026 Msa1076930:CDS 55.0%
GGGCTCTCACTTCCTGGACT+TGG - chr7_2:75478730-75478749 None:intergenic 60.0%
TGAACTTTCGGGCCAGCACC+TGG - chr7_2:75479483-75479502 None:intergenic 60.0%
GACACCCCAGGCAGAATACC+TGG - chr7_2:75481509-75481528 None:intergenic 60.0%
AGGGGTAGTCCCAATACGGC+AGG + chr7_2:75482579-75482598 Msa1076930:CDS 60.0%
GGGGTAGTCCCAATACGGCA+GGG + chr7_2:75482580-75482599 Msa1076930:CDS 60.0%
GGGTAGTCCCAATACGGCAG+GGG + chr7_2:75482581-75482600 Msa1076930:CDS 60.0%
CCCACACAACCCGAAGCCAT+TGG + chr7_2:75482970-75482989 Msa1076930:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 75477193 75483529 75477193 ID=Msa1076930;Name=Msa1076930
chr7_2 mRNA 75477193 75483529 75477193 ID=Msa1076930-mRNA-1;Parent=Msa1076930;Name=Msa1076930-mRNA-1;_AED=0.05;_eAED=0.05;_QI=415|1|1|1|0.8|0.72|11|252|865
chr7_2 exon 75477193 75477470 75477193 ID=Msa1076930-mRNA-1:exon:17970;Parent=Msa1076930-mRNA-1
chr7_2 exon 75478184 75478247 75478184 ID=Msa1076930-mRNA-1:exon:17971;Parent=Msa1076930-mRNA-1
chr7_2 exon 75478522 75479169 75478522 ID=Msa1076930-mRNA-1:exon:17972;Parent=Msa1076930-mRNA-1
chr7_2 exon 75479275 75479595 75479275 ID=Msa1076930-mRNA-1:exon:17973;Parent=Msa1076930-mRNA-1
chr7_2 exon 75480043 75480265 75480043 ID=Msa1076930-mRNA-1:exon:17974;Parent=Msa1076930-mRNA-1
chr7_2 exon 75481033 75481212 75481033 ID=Msa1076930-mRNA-1:exon:17975;Parent=Msa1076930-mRNA-1
chr7_2 exon 75481303 75481509 75481303 ID=Msa1076930-mRNA-1:exon:17976;Parent=Msa1076930-mRNA-1
chr7_2 exon 75481637 75481714 75481637 ID=Msa1076930-mRNA-1:exon:17977;Parent=Msa1076930-mRNA-1
chr7_2 exon 75481795 75481865 75481795 ID=Msa1076930-mRNA-1:exon:17978;Parent=Msa1076930-mRNA-1
chr7_2 exon 75482000 75482110 75482000 ID=Msa1076930-mRNA-1:exon:17979;Parent=Msa1076930-mRNA-1
chr7_2 exon 75482446 75483529 75482446 ID=Msa1076930-mRNA-1:exon:17980;Parent=Msa1076930-mRNA-1
chr7_2 five_prime_UTR 75477193 75477470 75477193 ID=Msa1076930-mRNA-1:five_prime_utr;Parent=Msa1076930-mRNA-1
chr7_2 five_prime_UTR 75478184 75478247 75478184 ID=Msa1076930-mRNA-1:five_prime_utr;Parent=Msa1076930-mRNA-1
chr7_2 five_prime_UTR 75478522 75478594 75478522 ID=Msa1076930-mRNA-1:five_prime_utr;Parent=Msa1076930-mRNA-1
chr7_2 CDS 75478595 75479169 75478595 ID=Msa1076930-mRNA-1:cds;Parent=Msa1076930-mRNA-1
chr7_2 CDS 75479275 75479595 75479275 ID=Msa1076930-mRNA-1:cds;Parent=Msa1076930-mRNA-1
chr7_2 CDS 75480043 75480265 75480043 ID=Msa1076930-mRNA-1:cds;Parent=Msa1076930-mRNA-1
chr7_2 CDS 75481033 75481212 75481033 ID=Msa1076930-mRNA-1:cds;Parent=Msa1076930-mRNA-1
chr7_2 CDS 75481303 75481509 75481303 ID=Msa1076930-mRNA-1:cds;Parent=Msa1076930-mRNA-1
chr7_2 CDS 75481637 75481714 75481637 ID=Msa1076930-mRNA-1:cds;Parent=Msa1076930-mRNA-1
chr7_2 CDS 75481795 75481865 75481795 ID=Msa1076930-mRNA-1:cds;Parent=Msa1076930-mRNA-1
chr7_2 CDS 75482000 75482110 75482000 ID=Msa1076930-mRNA-1:cds;Parent=Msa1076930-mRNA-1
chr7_2 CDS 75482446 75483277 75482446 ID=Msa1076930-mRNA-1:cds;Parent=Msa1076930-mRNA-1
chr7_2 three_prime_UTR 75483278 75483529 75483278 ID=Msa1076930-mRNA-1:three_prime_utr;Parent=Msa1076930-mRNA-1
Gene Sequence

>Msa1076930

ATGTTTAGCAGACCAAGTGGTTCCGGTGCTTTTAGTATATTCAAATGGAAACAGAAAGGCGCGTCATCTTTGACTAGAGGTTTACTTCATGATGATTCGCCGGAGATCGAATTGTCTAATTACGGAAGGATCCCAAGTCCAGGAAGTGAGAGCCCTTCAGATTTCCTCAATGGAGAAAGTGTATATGTAGAACCAATTGCTGATTTGGATCTCTTCTTTGAAAGACTTTATGGTTACTACTGTGAGAAAGGGTTATGGTGTATTGTTACAAAGTGGATTGTTGAACTTCTAAGTCTGGGGTTCACCATATGCTTTTCAGGATTTTTTTTACTATATGTTGATTGGAATGGGCTCCGTAATGCAAAATGTGGGATGGATGCTGTTGAATCTGGAATTAAGCCCTGTGATCTTGGCAAAGAAGCTCTTAATCAACACCCTTTAACCCCACTCACACTTACCAAAGCTATTATTGTTGGATACTTGGGGATTTTTTCCTTCTATTGGATGTTTTGTTTCCTGCGATTCTTTGCTCAACTAAAGGATATTCTCGAAATCCGCCAGTTTTTCTACAGCAGTCTTCATGTCACTGACAATGAAATTCAAACTATGCCCTGGGCCAAAATTGTTGACAAAGTTGTTCTCGTTCAAAATACTCGGAAACTATGTGTGCTGAAGGATCTTTCTGCCCATGATATAGTCATGAGACTGATGCGGAAGGAGAACTACTTAATTGGAATGCTCAACAAGGGTGTGCTTGCTTTCCCCATTTCACAATGGTTTCCAGGTGCTGGCCCGAAAGTTCAATCTAGTCCTGATGGAGCACAATATCGTTTAGTACTTACCAAGACCCTTGAATGGACTTTAAATTGGTGCATCCTACATAGCATGTTTGATTGGAACTTTTGTGTCAGAAGGGATTTTGTGTCAAATCCAAAGACATTACAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTCCTTGTCATATTCATGCTGGCATATCTCTTTCTGAGGCATGCTGAGCAATTTTATAATCACCCAAGCACAGCATCATCTCGAAGATGGTCAAACTTGTCTAGGTGGATTTTTAGGGAATACAATGAGGTCGACCATCTCTTCAGGCATCGGATTAATAACAGTGTATCACATGCTTCTGATTATCTCAAGCAGTTTCCTACACCTATCATATCTATCATTGCAAAATTCATATCTTTTGTATCCGGTGGCTTTGCTGCAATTCTGATCATTATTGCTTTTCTCGAGGAGTCTCTGCTAGAGGGCCATATATTTGGTCGGAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCTATTAGCCGGGCTGCAATTGCAGATGAGCTTCTGGTCTTAGATCCCGAGGGAACAATATCTATGGTGGTTCAGCATACACATTATATGCCAAAGAGATGGCGTGGCAAAGAAATTACTGACGTGGTCCGCATTGAATTTGAAACCTTATTCCAGTATACAGCAATGATGTTACTTGAGGAGATGGCTTCAATTTTCCTCACTCCATATTTACTTCTGTTTATTGTCCCAAAGCGAGTTGATGATATCTTGCAGTACATTGCCGATTTCACTGTAAATGTTGAAGGTGTTGGGCATGTTTGCAGTTTTAGCACCTTTGATTTTCAAGAGCATGGAAACTCTCATTATGGTTCCCCATATAATGCCTCTCGTAGCAGAAGGAGTTCACAGGGAAAGATGGAGAAATCATTGTTGAGCTTTCAGAGTAGTTATCCATCATGGGAACCAAATACTCAGGGGAAGCAGTTTTTGCTAAATCTTAGAACATTCAGAGAGCGGAAGTTATCAGTACATGGAAACATACACACATCTTCCCCTCCTAGAATGTGGAGGGGTAGTCCCAATACGGCAGGGGATGAAGACAGAAACAGGTTTATATCCAGGGAAATGCCATACAGCACTTTTGCAACTGGCAATCACTTGGATTCGTTGTGGTTGATTGAAGCCAACCAGAATAATCACCCCTATCTTCTTGATTGGTACTACACAGCTCGACCTCATGATGCAGCTTCAAGAGATGTTCCATTAGAACCATATGGAATAACAGAACGTTATTCCAGAGACTATTCGATGCCTTCCAACTTGACACAGAATGAACCCAACTATGAAGAATACTCAAATGAGTATCACGAGGATCGGGCTGCATCTCAACTTGGGGCTTCCTCATCAGCTCCCATCCTTAGGGAGAGCTTTAGTCAGGAGCAAAACTATAATGAACTTCCCCACACAACCCGAAGCCATTGGTGGGCTAGAAGTCGTCTACGGAGTGGACAAGCTCAGGCAAGCTTTTACGAGCCTCCAGATTTCAATGACCAAACAACATATAATTATCATGACAAGTTTTCTGATAGAGGGTCAGAGGATCAAGACCAAGAACAACACTTTTACTGGAGAGATCATCACAACAAATTATCTAAAACAACAATGACAGATGACTTAGAGGCAGGAGAATTTAATCTACATTTTGGTGATATTTATAGCAGACCTCCAGAAACTCCCACTATAAATTCCAGCACTGCTAGCTTTTGA
Protein sequence

>Msa1076930

MFSRPSGSGAFSIFKWKQKGASSLTRGLLHDDSPEIELSNYGRIPSPGSESPSDFLNGESVYVEPIADLDLFFERLYGYYCEKGLWCIVTKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLGKEALNQHPLTPLTLTKAIIVGYLGIFSFYWMFCFLRFFAQLKDILEIRQFFYSSLHVTDNEIQTMPWAKIVDKVVLVQNTRKLCVLKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPKVQSSPDGAQYRLVLTKTLEWTLNWCILHSMFDWNFCVRRDFVSNPKTLQKRLMVVGLAMLLLSPFLVIFMLAYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREYNEVDHLFRHRINNSVSHASDYLKQFPTPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAIADELLVLDPEGTISMVVQHTHYMPKRWRGKEITDVVRIEFETLFQYTAMMLLEEMASIFLTPYLLLFIVPKRVDDILQYIADFTVNVEGVGHVCSFSTFDFQEHGNSHYGSPYNASRSRRSSQGKMEKSLLSFQSSYPSWEPNTQGKQFLLNLRTFRERKLSVHGNIHTSSPPRMWRGSPNTAGDEDRNRFISREMPYSTFATGNHLDSLWLIEANQNNHPYLLDWYYTARPHDAASRDVPLEPYGITERYSRDYSMPSNLTQNEPNYEEYSNEYHEDRAASQLGASSSAPILRESFSQEQNYNELPHTTRSHWWARSRLRSGQAQASFYEPPDFNDQTTYNYHDKFSDRGSEDQDQEQHFYWRDHHNKLSKTTMTDDLEAGEFNLHFGDIYSRPPETPTINSSTASF*