AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1122890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1122890 MtrunA17_Chr7g0261081 96.305 866 31 1 1 865 1 866 0.0 1746
Msa1122890 MtrunA17_Chr1g0184191 77.445 869 189 6 1 865 1 866 0.0 1391
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1122890 AT2G31260.1 65.533 882 265 15 1 862 2 864 0.0 1122

Find 251 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCTTTGAAAGACTTTA+TGG 0.100521 7_3:-73419582 Msa1122890:CDS
GAATTTATAGTGGGAGTTTC+TGG 0.112453 7_3:+73415151 None:intergenic
AACTGCTTCCCCTGAGTATT+TGG 0.152672 7_3:+73415913 None:intergenic
AACAACTTTGTCAACAATTT+TGG 0.153920 7_3:+73419071 None:intergenic
GAAGGGTGCTTTCAATTAAA+TGG 0.190594 7_3:-73415070 Msa1122890:three_prime_UTR
GGAGAATTTAATCTACATTT+TGG 0.223978 7_3:-73415193 Msa1122890:CDS
AAAATATCATTGCAGATATT+TGG 0.224381 7_3:-73417099 Msa1122890:intron
CCCTTGAATGGACTTTAAAT+TGG 0.245163 7_3:-73418840 Msa1122890:CDS
TGTAGAACCAATTGCTGATT+TGG 0.253494 7_3:-73419607 Msa1122890:CDS
CCCATTTCACAATGGTTTCC+AGG 0.256603 7_3:-73418925 Msa1122890:CDS
GTAAGTGTGAGTGGGGTTAA+AGG 0.263267 7_3:+73419357 None:intergenic
GTCTTCATCCCCTGCCGTAT+TGG 0.264537 7_3:+73415798 None:intergenic
CGGAAGGAGAACTACTTAAT+TGG 0.265768 7_3:-73418976 Msa1122890:CDS
GTTATTCCATATGGTTCTAA+TGG 0.268064 7_3:+73415616 None:intergenic
CTGCTACGAGAGGCATTATA+TGG 0.271120 7_3:+73416338 None:intergenic
TTCTAGCCCACCAATGGCTT+CGG 0.278161 7_3:+73415407 None:intergenic
CAGGACTAGATTGAACTTTC+GGG 0.278462 7_3:+73418896 None:intergenic
TCTGAAGGGCTCTCACTTCC+TGG 0.293553 7_3:+73419654 None:intergenic
TCTTCATCCCCTGCCGTATT+GGG 0.293680 7_3:+73415799 None:intergenic
GTCCCTCTCTAATTGTTATC+TGG 0.296568 7_3:-73415021 Msa1122890:three_prime_UTR
TCCAGTAAAAGTGTTGTTCT+TGG 0.302842 7_3:+73415269 None:intergenic
CCTCATCAGCTCCCATCCTT+AGG 0.305842 7_3:-73415477 Msa1122890:CDS
TGCAATTGCAGATGAGCTTC+TGG 0.319750 7_3:-73417019 Msa1122890:CDS
GGGCTCTCACTTCCTGGACT+TGG 0.325164 7_3:+73419660 None:intergenic
TCAGGACTAGATTGAACTTT+CGG 0.327003 7_3:+73418895 None:intergenic
GAAGATAGGGGTGATTATTC+TGG 0.327635 7_3:+73415689 None:intergenic
AGCTATTATTGTTGGATACT+TGG 0.328327 7_3:-73419331 Msa1122890:CDS
GGACTACCCCTCCACATTCT+AGG 0.344102 7_3:+73415820 None:intergenic
ACAATAAACAGAAGTAAATA+TGG 0.345471 7_3:+73416702 None:intergenic
AAGGTGTTGGGCATGTTTGC+AGG 0.345877 7_3:-73416543 Msa1122890:intron
GAACCTTGTTATAACCGTTT+TGG 0.346406 7_3:-73419866 Msa1122890:five_prime_UTR
TTTGAGTATTCTTCATAGTT+GGG 0.347898 7_3:+73415541 None:intergenic
TTAGGTTCAGCTCACCCCTT+TGG 0.349582 7_3:-73420207 Msa1122890:intron
ATTTGAGTATTCTTCATAGT+TGG 0.350704 7_3:+73415540 None:intergenic
TAACGTTCTGTTATTCCATA+TGG 0.351902 7_3:+73415607 None:intergenic
TACTATATGTTGATTGGAAT+GGG 0.357764 7_3:-73419464 Msa1122890:CDS
GATTGTTGAACTTCTAAGTC+TGG 0.359203 7_3:-73419517 Msa1122890:CDS
CTTACCAAAGCTATTATTGT+TGG 0.359747 7_3:-73419339 Msa1122890:CDS
AGCTCACCCCTTTGGGACTT+TGG 0.363145 7_3:-73420199 Msa1122890:five_prime_UTR
TATTTGGTCGGAACTTGTTT+TGG 0.363325 7_3:-73417083 Msa1122890:CDS
CCTGGAAACCATTGTGAAAT+GGG 0.364513 7_3:+73418925 None:intergenic
GGGGTCCTTGCATCTGAAAA+TGG 0.365269 7_3:+73414896 None:intergenic
CAGAAAAGGCTTATGGTAGT+TGG 0.367074 7_3:-73418298 Msa1122890:CDS
TCTAGCCCACCAATGGCTTC+GGG 0.369897 7_3:+73415408 None:intergenic
TGAATTTGAAACCTTATTCC+AGG 0.371525 7_3:-73416899 Msa1122890:intron
TAGGTTCAGCTCACCCCTTT+GGG 0.373846 7_3:-73420206 Msa1122890:five_prime_UTR
GTTGTTTGGTCATTGAAATC+TGG 0.373910 7_3:+73415340 None:intergenic
ATCACCCCTATCTTCTTGAT+TGG 0.376879 7_3:-73415681 Msa1122890:CDS
TCTTTGCCACGCCATCTCTT+TGG 0.378039 7_3:+73416943 None:intergenic
CAGGCAGAATACCTGGAATA+AGG 0.378454 7_3:+73416888 None:intergenic
TTTGCTGTATATAGATTCAT+TGG 0.378561 7_3:-73414987 Msa1122890:three_prime_UTR
GGAATTAAGCCCTGTGATCT+TGG 0.378592 7_3:-73419402 Msa1122890:CDS
GACATTACAGAAAAGGCTTA+TGG 0.380010 7_3:-73418305 Msa1122890:CDS
AACAATGACAGATGACTTAG+AGG 0.383575 7_3:-73415218 Msa1122890:CDS
TCACAATGGTTTCCAGGTGC+TGG 0.383647 7_3:-73418919 Msa1122890:CDS
TTCAACATTTACAGTGAAAT+CGG 0.386132 7_3:+73416564 None:intergenic
GCTATTATTGTTGGATACTT+GGG 0.389328 7_3:-73419330 Msa1122890:CDS
TTTAGCAGACCAAGTGGTTC+CGG 0.389483 7_3:-73419789 Msa1122890:CDS
TAAAGTCCATTCAAGGGTCT+TGG 0.389766 7_3:+73418846 None:intergenic
GAGCATGGAAACTCTCATTA+TGG 0.390073 7_3:-73416365 Msa1122890:CDS
ACCTGGAAACCATTGTGAAA+TGG 0.391785 7_3:+73418924 None:intergenic
CATGATAATTATATGTTGTT+TGG 0.395237 7_3:+73415326 None:intergenic
TACTCAAAAGCTAGCAGTGC+TGG 0.395445 7_3:+73415129 None:intergenic
GTAGTACCAATCAAGAAGAT+AGG 0.404579 7_3:+73415675 None:intergenic
GATCGGGCTGCATCTCAACT+TGG 0.409523 7_3:-73415505 Msa1122890:CDS
CTTCGAGATGATGCTGTGCT+TGG 0.409901 7_3:+73418187 None:intergenic
TCCTACATAGCATGTTTGAT+TGG 0.414671 7_3:-73418813 Msa1122890:intron
AGAAAAGGCTTATGGTAGTT+GGG 0.415599 7_3:-73418297 Msa1122890:CDS
TGAGTATTTGGTTCCCATGA+TGG 0.416490 7_3:+73415925 None:intergenic
GGCTCTCACTTCCTGGACTT+GGG 0.417635 7_3:+73419661 None:intergenic
GGGATGGATGCTGTTGAATC+TGG 0.418976 7_3:-73419423 Msa1122890:CDS
TTCAGAGTAGTTATCCATCA+TGG 0.419889 7_3:-73415939 Msa1122890:CDS
ATCGGGCTGCATCTCAACTT+GGG 0.423241 7_3:-73415504 Msa1122890:CDS
GAAACAAAACATCCAATAGA+AGG 0.424244 7_3:+73419299 None:intergenic
TTACTATATGTTGATTGGAA+TGG 0.426389 7_3:-73419465 Msa1122890:CDS
AGCTTCTTTGCCAAGATCAC+AGG 0.430987 7_3:+73419392 None:intergenic
TCCCGAGGGAACAATATCTA+TGG 0.431420 7_3:-73416989 Msa1122890:CDS
TTGGTCTTTGGGGAATGGAT+TGG 0.441248 7_3:-73419847 Msa1122890:five_prime_UTR
ACCAATTTAAAGTCCATTCA+AGG 0.443781 7_3:+73418839 None:intergenic
CAGGGGATGAAGACAGAAAC+AGG 0.448292 7_3:-73415789 Msa1122890:CDS
ATTGTTGAACTTCTAAGTCT+GGG 0.448533 7_3:-73419516 Msa1122890:CDS
AAGGAGTTCACAGGGAAAGA+TGG 0.449011 7_3:-73416315 Msa1122890:CDS
TATGGTTACTACTGTGAGAA+AGG 0.450099 7_3:-73419564 Msa1122890:CDS
CACCATAGATATTGTTCCCT+CGG 0.451923 7_3:+73416987 None:intergenic
TAAGTGTGAGTGGGGTTAAA+GGG 0.453021 7_3:+73419358 None:intergenic
GTATCCAACAATAATAGCTT+TGG 0.455646 7_3:+73419335 None:intergenic
AGCCCTTCAGATTTCCTCAA+TGG 0.457772 7_3:-73419642 Msa1122890:CDS
ACCAATGGCTTCGGGTTGTG+TGG 0.457791 7_3:+73415416 None:intergenic
AAGAGATCCAAATCAGCAAT+TGG 0.458966 7_3:+73419600 None:intergenic
CCTTAGGGAGAGCTTTAGTC+AGG 0.459193 7_3:-73415461 Msa1122890:CDS
GCGATTCTTTGCTCAACTAA+AGG 0.459966 7_3:-73419274 Msa1122890:CDS
TACTTACCAAGACCCTTGAA+TGG 0.460856 7_3:-73418852 Msa1122890:CDS
TGAACTTTCGGGCCAGCACC+TGG 0.463130 7_3:+73418907 None:intergenic
ATCCAAAGACATTACAGAAA+AGG 0.464783 7_3:-73418312 Msa1122890:CDS
AGCAGTGCTGGAATTTATAG+TGG 0.465268 7_3:+73415141 None:intergenic
CCAATGGCTTCGGGTTGTGT+GGG 0.465775 7_3:+73415417 None:intergenic
ACAGAAACAGGTTTATATCC+AGG 0.466653 7_3:-73415777 Msa1122890:CDS
TTTGCAATGATAGATATGAT+AGG 0.466727 7_3:+73417279 None:intergenic
CTCATCAGCTCCCATCCTTA+GGG 0.467690 7_3:-73415476 Msa1122890:CDS
TATAGGTCGACCATCTCTTC+AGG 0.471785 7_3:-73417359 Msa1122890:intron
TGCTACGAGAGGCATTATAT+GGG 0.472893 7_3:+73416339 None:intergenic
TTCGAGATGATGCTGTGCTT+GGG 0.476956 7_3:+73418188 None:intergenic
TTTATTATAAAGTTTGCGTT+CGG 0.478832 7_3:+73421123 None:intergenic
GAACTATAACTGCTATTAGC+CGG 0.481240 7_3:-73417044 Msa1122890:CDS
TCAGTCTCATGACTATATCA+TGG 0.482419 7_3:+73419001 None:intergenic
TAGTACCAATCAAGAAGATA+GGG 0.482945 7_3:+73415676 None:intergenic
ACTGTAAATGTTGAAGGTGT+TGG 0.484395 7_3:-73416556 Msa1122890:CDS
GAGATCGAATTGTCTAATTA+CGG 0.486113 7_3:-73419690 Msa1122890:CDS
TCTACGGAGTGGACAAGCTC+AGG 0.488656 7_3:-73415380 Msa1122890:CDS
GATGTTCCATTAGAACCATA+TGG 0.488783 7_3:-73415622 Msa1122890:CDS
ATGAAATTCAAACTATGCCC+TGG 0.493235 7_3:-73419095 Msa1122890:CDS
CTGTAAATGTTGAAGGTGTT+GGG 0.496375 7_3:-73416555 Msa1122890:CDS
AAACGATATTGTGCTCCATC+AGG 0.497164 7_3:+73418877 None:intergenic
ATGATAGATATGATAGGTGT+AGG 0.502443 7_3:+73417285 None:intergenic
AGGACCCCAGCAAAATAGTC+TGG 0.502578 7_3:-73414881 Msa1122890:three_prime_UTR
AAATGAGTATCACGAGGATC+GGG 0.504809 7_3:-73415521 Msa1122890:CDS
AATGAACCTCAGCTTGATGT+TGG 0.510192 7_3:-73414946 Msa1122890:three_prime_UTR
TAATTAGACAATTCGATCTC+CGG 0.512269 7_3:+73419693 None:intergenic
ATTCCTTGTCATATTCATGC+TGG 0.512407 7_3:-73418251 Msa1122890:CDS
CATATACACTTTCTCCATTG+AGG 0.512728 7_3:+73419628 None:intergenic
GATTTCACTGTAAATGTTGA+AGG 0.515835 7_3:-73416562 Msa1122890:CDS
ATCATGGGAACCAAATACTC+AGG 0.518116 7_3:-73415923 Msa1122890:CDS
ACTACTGTGAGAAAGGGTTA+TGG 0.518635 7_3:-73419557 Msa1122890:CDS
AGGGGTAGTCCCAATACGGC+AGG 0.521250 7_3:-73415808 Msa1122890:CDS
CAAATGAGTATCACGAGGAT+CGG 0.521885 7_3:-73415522 Msa1122890:CDS
AATGATGTTACTTGAGGAGA+TGG 0.523349 7_3:-73416742 Msa1122890:CDS
TATGGTGTATTGTTACAAAG+TGG 0.525702 7_3:-73419539 Msa1122890:CDS
GGAAGGCATCGAATAGTCTC+TGG 0.526974 7_3:+73415582 None:intergenic
ACCATAGATATTGTTCCCTC+GGG 0.527633 7_3:+73416988 None:intergenic
GTCAACGCCAAAGTCCCAAA+GGG 0.527737 7_3:+73420192 None:intergenic
GCACAGCATCATCTCGAAGA+TGG 0.528098 7_3:-73418183 Msa1122890:CDS
ATGGTTACTACTGTGAGAAA+GGG 0.529048 7_3:-73419563 Msa1122890:CDS
TAGCTTTGGTAAGTGTGAGT+GGG 0.530753 7_3:+73419349 None:intergenic
GAAGATGGTCAAACTTGTCT+AGG 0.533585 7_3:-73418168 Msa1122890:CDS
AGCATGAATATGACAAGGAA+TGG 0.534278 7_3:+73418253 None:intergenic
TCATTCTGTGTCAAGTTGGA+AGG 0.535353 7_3:+73415565 None:intergenic
TGTTCACAGACACTAATAGT+AGG 0.535903 7_3:+73419815 None:intergenic
ACTTCTGTTTATTGTCCCAA+AGG 0.536240 7_3:-73416694 Msa1122890:intron
CCTAAGGATGGGAGCTGATG+AGG 0.537502 7_3:+73415477 None:intergenic
TCAGAGTAGTTATCCATCAT+GGG 0.539771 7_3:-73415938 Msa1122890:CDS
CTATTATTGTTGGATACTTG+GGG 0.540123 7_3:-73419329 Msa1122890:CDS
TCCATGCTCTTGAAAATCAA+AGG 0.540684 7_3:+73416379 None:intergenic
AACTATAACTGCTATTAGCC+GGG 0.542388 7_3:-73417043 Msa1122890:CDS
ACTAAAGCTCTCCCTAAGGA+TGG 0.543023 7_3:+73415465 None:intergenic
ATAGGGGTGATTATTCTGGT+TGG 0.544484 7_3:+73415693 None:intergenic
AAAGTTCAATCTAGTCCTGA+TGG 0.544493 7_3:-73418892 Msa1122890:CDS
CCCACACAACCCGAAGCCAT+TGG 0.547154 7_3:-73415417 Msa1122890:CDS
TAATCCGATGCCTGAAGAGA+TGG 0.549224 7_3:+73417349 None:intergenic
ACACAACCCGAAGCCATTGG+TGG 0.550262 7_3:-73415414 Msa1122890:CDS
CTCGAGGAGTCTCTGCTAGA+GGG 0.550555 7_3:-73417201 Msa1122890:CDS
TTGTTCTCGTTCAAAATACT+CGG 0.551966 7_3:-73419053 Msa1122890:CDS
TCTCGAGGAGTCTCTGCTAG+AGG 0.552554 7_3:-73417202 Msa1122890:CDS
CTAAAAGCACCGGAACCACT+TGG 0.553267 7_3:+73419780 None:intergenic
GTTCGGAAGGAGATGAGCAT+AGG 0.553415 7_3:+73421140 None:intergenic
GCTTCTTTGCCAAGATCACA+GGG 0.553864 7_3:+73419393 None:intergenic
GTGGAGGGGTAGTCCCAATA+CGG 0.557059 7_3:-73415812 Msa1122890:CDS
GGGTAGTCCCAATACGGCAG+GGG 0.557263 7_3:-73415806 Msa1122890:CDS
TTATAAAGTTTGCGTTCGGA+AGG 0.557342 7_3:+73421127 None:intergenic
ACCAATCAAACATGCTATGT+AGG 0.558613 7_3:+73418812 None:intergenic
ATGACAGATGACTTAGAGGC+AGG 0.558731 7_3:-73415214 Msa1122890:CDS
TGCTGGCATATCTCTTTCTG+AGG 0.559787 7_3:-73418234 Msa1122890:CDS
TCGTAGCAGAAGGAGTTCAC+AGG 0.560103 7_3:-73416324 Msa1122890:CDS
TTAGTTGAGCAAAGAATCGC+AGG 0.562238 7_3:+73419277 None:intergenic
TCGACCATCTCTTCAGGCAT+CGG 0.562994 7_3:-73417353 Msa1122890:CDS
GGCGCGTCATCTTTGACTAG+AGG 0.563241 7_3:-73419735 Msa1122890:CDS
GGGCTCCGTAATGCAAAATG+TGG 0.563493 7_3:-73419444 Msa1122890:CDS
TTGTTGAACTTCTAAGTCTG+GGG 0.566155 7_3:-73419515 Msa1122890:CDS
AGTGCTGTATGGCATTTCCC+TGG 0.566226 7_3:+73415759 None:intergenic
TACGGAAGGATCCCAAGTCC+AGG 0.566589 7_3:-73419672 Msa1122890:CDS
CTTAATTGGAATGCTCAACA+AGG 0.567745 7_3:-73418962 Msa1122890:CDS
TATCATTGCAGATATTTGGT+CGG 0.568586 7_3:-73417095 Msa1122890:intron
CAGAAACAGGTTTATATCCA+GGG 0.569124 7_3:-73415776 Msa1122890:CDS
TTCCCCTCCTAGAATGTGGA+GGG 0.569698 7_3:-73415827 Msa1122890:CDS
CAGAATTGCAGCAAAGCCAC+CGG 0.573817 7_3:+73417239 None:intergenic
TTTGAATATACTAAAAGCAC+CGG 0.574468 7_3:+73419770 None:intergenic
TTTACTTCATGATGATTCGC+CGG 0.574817 7_3:-73419712 Msa1122890:CDS
CACAACCCGAAGCCATTGGT+GGG 0.577683 7_3:-73415413 Msa1122890:CDS
CTCCATTGAGGAAATCTGAA+GGG 0.578699 7_3:+73419640 None:intergenic
TCTCCATTGAGGAAATCTGA+AGG 0.580109 7_3:+73419639 None:intergenic
AGCTTTGGTAAGTGTGAGTG+GGG 0.580159 7_3:+73419350 None:intergenic
TTGCTTTCCCCATTTCACAA+TGG 0.581632 7_3:-73418933 Msa1122890:CDS
GGGGTAGTCCCAATACGGCA+GGG 0.581900 7_3:-73415807 Msa1122890:CDS
CCATTCCCCAAAGACCAAAA+CGG 0.583103 7_3:+73419852 None:intergenic
CCAGTTGCAAAAGTGCTGTA+TGG 0.583969 7_3:+73415748 None:intergenic
AGATGATGAAACAGTAGCGA+AGG 0.584404 7_3:+73420963 None:intergenic
GTTTGGTCATTGAAATCTGG+AGG 0.584448 7_3:+73415343 None:intergenic
CACATTATATGCCAAAGAGA+TGG 0.585314 7_3:-73416954 Msa1122890:CDS
GAGCGGAAGTTATCAGTACA+TGG 0.585425 7_3:-73415865 Msa1122890:CDS
TTTCCAGATAACAATTAGAG+AGG 0.586115 7_3:+73415018 None:intergenic
GATGAAACAGTAGCGAAGGA+AGG 0.589559 7_3:+73420967 None:intergenic
TCGGAAACTATGTGTGCTGA+AGG 0.593556 7_3:-73419034 Msa1122890:CDS
CTAAAGCTCTCCCTAAGGAT+GGG 0.595120 7_3:+73415466 None:intergenic
GGGTTCATTCTGTGTCAAGT+TGG 0.595429 7_3:+73415561 None:intergenic
CCTGACTAAAGCTCTCCCTA+AGG 0.596692 7_3:+73415461 None:intergenic
TGAAATTCAAACTATGCCCT+GGG 0.597379 7_3:-73419094 Msa1122890:CDS
TCGGGCTGCATCTCAACTTG+GGG 0.597814 7_3:-73415503 Msa1122890:CDS
CAGTCTCATGACTATATCAT+GGG 0.597885 7_3:+73419002 None:intergenic
GACGACTTCTAGCCCACCAA+TGG 0.598590 7_3:+73415401 None:intergenic
TCCTTGCATCTGAAAATGGA+AGG 0.598956 7_3:+73414900 None:intergenic
GGTGGGCTAGAAGTCGTCTA+CGG 0.600262 7_3:-73415396 Msa1122890:CDS
TTCCAGATAACAATTAGAGA+GGG 0.601046 7_3:+73415019 None:intergenic
ATAGCTTTGGTAAGTGTGAG+TGG 0.602946 7_3:+73419348 None:intergenic
CCAATTTAAAGTCCATTCAA+GGG 0.603846 7_3:+73418840 None:intergenic
CCGTAATGCAAAATGTGGGA+TGG 0.604122 7_3:-73419439 Msa1122890:CDS
ACCCCTCCACATTCTAGGAG+GGG 0.604562 7_3:+73415825 None:intergenic
GCTCATCTGCAATTGCAGCC+CGG 0.605056 7_3:+73417025 None:intergenic
TGTCAACGCCAAAGTCCCAA+AGG 0.605903 7_3:+73420191 None:intergenic
TTTATAGTGGGAGTTTCTGG+AGG 0.606997 7_3:+73415154 None:intergenic
CTTCCCCTCCTAGAATGTGG+AGG 0.608862 7_3:-73415828 Msa1122890:CDS
CAATGGCTTCGGGTTGTGTG+GGG 0.610424 7_3:+73415418 None:intergenic
TCATGGGAACCAAATACTCA+GGG 0.611108 7_3:-73415922 Msa1122890:CDS
TAAGTTCCAACATCAAGCTG+AGG 0.612971 7_3:+73414940 None:intergenic
CATCTTCCCCTCCTAGAATG+TGG 0.614729 7_3:-73415831 Msa1122890:CDS
TACCCCTCCACATTCTAGGA+GGG 0.614814 7_3:+73415824 None:intergenic
AGAGAGGGACAATCATGACT+TGG 0.617793 7_3:+73415034 None:intergenic
ACAGAAGTAAATATGGAGTG+AGG 0.618250 7_3:+73416709 None:intergenic
AGATGGAGAAATCATTGTTG+AGG 0.619203 7_3:-73416298 Msa1122890:intron
TACAGCAATGATGTTACTTG+AGG 0.621146 7_3:-73416748 Msa1122890:CDS
TCTCTTGAAGCTGCATCATG+AGG 0.621641 7_3:+73415643 None:intergenic
GCAATCACTTGGATTCGTTG+TGG 0.621682 7_3:-73415726 Msa1122890:CDS
ATATTCAAATGGAAACAGAA+AGG 0.623281 7_3:-73419756 Msa1122890:CDS
CGTAGCAGAAGGAGTTCACA+GGG 0.625758 7_3:-73416323 Msa1122890:CDS
ATCTTAGAACATTCAGAGAG+CGG 0.626044 7_3:-73415882 Msa1122890:CDS
CGAGGGAACAATATCTATGG+TGG 0.626273 7_3:-73416986 Msa1122890:CDS
TCGAATTGTCTAATTACGGA+AGG 0.628393 7_3:-73419686 Msa1122890:CDS
TATATAGATTCATTGGTGTG+AGG 0.629591 7_3:-73414980 Msa1122890:three_prime_UTR
CTACCCCTCCACATTCTAGG+AGG 0.629863 7_3:+73415823 None:intergenic
ATAATGCCTCTCGTAGCAGA+AGG 0.629914 7_3:-73416334 Msa1122890:CDS
GCAGTGCTGGAATTTATAGT+GGG 0.639720 7_3:+73415142 None:intergenic
GCTTCTGGTCTTAGATCCCG+AGG 0.643614 7_3:-73417004 Msa1122890:CDS
AGTCATGAGACTGATGCGGA+AGG 0.646846 7_3:-73418992 Msa1122890:CDS
GATGGTCAAACTTGTCTAGG+TGG 0.647207 7_3:-73418165 Msa1122890:CDS
CTGGAAACCATTGTGAAATG+GGG 0.649696 7_3:+73418926 None:intergenic
TCCCCTCCTAGAATGTGGAG+GGG 0.656107 7_3:-73415826 Msa1122890:CDS
GCTAGAAGTCGTCTACGGAG+TGG 0.667710 7_3:-73415391 Msa1122890:CDS
AGACCAAAACGGTTATAACA+AGG 0.668823 7_3:+73419863 None:intergenic
TATATGCCAAAGAGATGGCG+TGG 0.670967 7_3:-73416949 Msa1122890:CDS
TTAATTGGAATGCTCAACAA+GGG 0.673370 7_3:-73418961 Msa1122890:CDS
ACAATGTTTAGCAGACCAAG+TGG 0.673800 7_3:-73419795 Msa1122890:CDS
TGGCAAAGAAATTACTGACG+TGG 0.676549 7_3:-73416929 Msa1122890:CDS
ATATAGTCATGAGACTGATG+CGG 0.679190 7_3:-73418996 Msa1122890:CDS
GGCTCCGTAATGCAAAATGT+GGG 0.679327 7_3:-73419443 Msa1122890:CDS
AGTACCAATCAAGAAGATAG+GGG 0.679475 7_3:+73415677 None:intergenic
CTTCTGGTCTTAGATCCCGA+GGG 0.679702 7_3:-73417003 Msa1122890:CDS
TGAACTCCTTCTGCTACGAG+AGG 0.680258 7_3:+73416328 None:intergenic
GCTACGAGAGGCATTATATG+GGG 0.685648 7_3:+73416340 None:intergenic
ATGCCAGCATGAATATGACA+AGG 0.687544 7_3:+73418248 None:intergenic
TCAACGCCAAAGTCCCAAAG+GGG 0.723951 7_3:+73420193 None:intergenic
ATAAGGTTTCAAATTCAATG+CGG 0.726994 7_3:+73416905 None:intergenic
ATACTCAAATGAGTATCACG+AGG 0.745566 7_3:-73415527 Msa1122890:CDS
CATGGGAACCAAATACTCAG+GGG 0.758921 7_3:-73415921 Msa1122890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTATTGGAAAATTTA+TGG - chr7_3:73418270-73418289 Msa1122890:CDS 10.0%
!!! TGATAATTTTTTTTTAGTAT+AGG - chr7_3:73418313-73418332 Msa1122890:CDS 10.0%
!! TAAAATTCAAAACATATATA+TGG + chr7_3:73419872-73419891 None:intergenic 10.0%
!!! TTTTTTATACTTTTGTGAAA+TGG - chr7_3:73415816-73415835 Msa1122890:CDS 15.0%
!!! TTATTTTTCTGTTGTTTATT+TGG - chr7_3:73416082-73416101 Msa1122890:intron 15.0%
!!! TATTTTTCTGTTGTTTATTT+GGG - chr7_3:73416083-73416102 Msa1122890:intron 15.0%
!! GTAAGATTCTAATATTAATT+TGG - chr7_3:73416174-73416193 Msa1122890:intron 15.0%
!!! TTTTTTTACTATATGTTGAT+TGG - chr7_3:73416604-73416623 Msa1122890:intron 15.0%
!! ACACATTATTAAATATTATC+AGG + chr7_3:73417348-73417367 None:intergenic 15.0%
!!! CTATTCATGAAAATTTTTAT+TGG - chr7_3:73418259-73418278 Msa1122890:CDS 15.0%
!! ATTTATGGAAATTACAATAA+AGG - chr7_3:73418285-73418304 Msa1122890:CDS 15.0%
!! TATTTATTTACACATAGAAT+AGG - chr7_3:73419258-73419277 Msa1122890:CDS 15.0%
!! CAAAATATTCATAATAGTAA+TGG + chr7_3:73419904-73419923 None:intergenic 15.0%
!!! TCCAAAAAAAATTATTTTAC+TGG + chr7_3:73420059-73420078 None:intergenic 15.0%
!! AATTAAACGAAAATACATAT+AGG + chr7_3:73420091-73420110 None:intergenic 15.0%
!! TTTATTATAAAGTTTGCGTT+CGG + chr7_3:73414954-73414973 None:intergenic 20.0%
!! TCATTGATATTCATATGATA+TGG + chr7_3:73415186-73415205 None:intergenic 20.0%
!! CATATGAATATCAATGATTT+CGG - chr7_3:73415189-73415208 Msa1122890:CDS 20.0%
!!! TAACTGAATTTGTTCTTTTT+TGG - chr7_3:73415487-73415506 Msa1122890:CDS 20.0%
!! TATACAAATACAATGATCTT+TGG - chr7_3:73415544-73415563 Msa1122890:CDS 20.0%
!!! TTGATTATTTTTGAACACTT+AGG - chr7_3:73415763-73415782 Msa1122890:CDS 20.0%
!! ATTTCACAAAATGGTTAAAA+GGG + chr7_3:73417409-73417428 None:intergenic 20.0%
!!! TTTTAACCATTTTGTGAAAT+CGG - chr7_3:73417409-73417428 Msa1122890:intron 20.0%
!! ATAAATTGCATCCTTATATA+AGG + chr7_3:73417485-73417504 None:intergenic 20.0%
!! TTTCAAATTTCATGTTATTC+TGG - chr7_3:73417526-73417545 Msa1122890:intron 20.0%
!! AATTTCATAGTTAGTTGTAT+AGG - chr7_3:73417558-73417577 Msa1122890:intron 20.0%
!!! GTTTATTTTCAGTACATAAT+TGG - chr7_3:73418101-73418120 Msa1122890:intron 20.0%
!!! AACTTCAAATTTTTCTTTCA+TGG + chr7_3:73418231-73418250 None:intergenic 20.0%
!!! TTTTCAAACAACATAAATGA+TGG + chr7_3:73418517-73418536 None:intergenic 20.0%
!!! TTATCAATAACTTGTGTTAT+AGG - chr7_3:73418698-73418717 Msa1122890:intron 20.0%
!!! AAATTCATATCTTTTGTATC+CGG - chr7_3:73418816-73418835 Msa1122890:CDS 20.0%
!! AAAATATCATTGCAGATATT+TGG - chr7_3:73418975-73418994 Msa1122890:CDS 20.0%
!! ACAATAAACAGAAGTAAATA+TGG + chr7_3:73419375-73419394 None:intergenic 20.0%
!! TACTTGGAGATTTATTTATA+TGG - chr7_3:73419412-73419431 Msa1122890:CDS 20.0%
!!! GCCAGTAAAATAATTTTTTT+TGG - chr7_3:73420055-73420074 Msa1122890:intron 20.0%
!! CATGATAATTATATGTTGTT+TGG + chr7_3:73420751-73420770 None:intergenic 20.0%
!! AAACTCTTTTCTTTACTTCA+AGG - chr7_3:73415136-73415155 Msa1122890:CDS 25.0%
! CATATGATATGGAAAAGAAA+GGG + chr7_3:73415175-73415194 None:intergenic 25.0%
! TCATATGATATGGAAAAGAA+AGG + chr7_3:73415176-73415195 None:intergenic 25.0%
! CAACTATCTTAACTATTCAT+TGG + chr7_3:73415637-73415656 None:intergenic 25.0%
! AGTTAAGATAGTTGAAAATG+CGG - chr7_3:73415643-73415662 Msa1122890:CDS 25.0%
!! ACATTTGAAGATGATGTTTT+AGG - chr7_3:73415849-73415868 Msa1122890:CDS 25.0%
!! TTTGAATATACTAAAAGCAC+CGG + chr7_3:73416307-73416326 None:intergenic 25.0%
!! GTGCTTTTAGTATATTCAAA+TGG - chr7_3:73416307-73416326 Msa1122890:CDS 25.0%
! ATATTCAAATGGAAACAGAA+AGG - chr7_3:73416318-73416337 Msa1122890:CDS 25.0%
!! AAAAAATCCTGAAAAGCATA+TGG + chr7_3:73416589-73416608 None:intergenic 25.0%
!! TTACTATATGTTGATTGGAA+TGG - chr7_3:73416609-73416628 Msa1122890:intron 25.0%
!! TACTATATGTTGATTGGAAT+GGG - chr7_3:73416610-73416629 Msa1122890:intron 25.0%
!! AACAACTTTGTCAACAATTT+TGG + chr7_3:73417006-73417025 None:intergenic 25.0%
!! GTATGAATTATTGTCTTTTG+AGG - chr7_3:73417366-73417385 Msa1122890:intron 25.0%
! AAATGGTTAAAAGGGAAAAT+TGG + chr7_3:73417401-73417420 None:intergenic 25.0%
! GATTTCACAAAATGGTTAAA+AGG + chr7_3:73417410-73417429 None:intergenic 25.0%
! ATAAGGATGCAATTTATATC+TGG - chr7_3:73417488-73417507 Msa1122890:intron 25.0%
!! AGGTATCATATTCATTTTCT+TGG - chr7_3:73417951-73417970 Msa1122890:intron 25.0%
! AACTGAATAAAATATGCACT+TGG + chr7_3:73418084-73418103 None:intergenic 25.0%
!!! CTTGCATATTTTTTTGAAAC+AGG - chr7_3:73418433-73418452 Msa1122890:intron 25.0%
! TGTAACATAGTTATTTGACT+TGG - chr7_3:73418491-73418510 Msa1122890:intron 25.0%
!! TAATTCTAAAAACGATAACC+AGG + chr7_3:73418643-73418662 None:intergenic 25.0%
! TTTGCAATGATAGATATGAT+AGG + chr7_3:73418798-73418817 None:intergenic 25.0%
! ATAAGGTTTCAAATTCAATG+CGG + chr7_3:73419172-73419191 None:intergenic 25.0%
!! CATAATGTGAATGTATTGAT+CGG + chr7_3:73419218-73419237 None:intergenic 25.0%
! TTCAACATTTACAGTGAAAT+CGG + chr7_3:73419513-73419532 None:intergenic 25.0%
! CTCATAAGACAAAATTCATT+AGG - chr7_3:73419823-73419842 Msa1122890:five_prime_UTR 25.0%
! TAAGACAAAATTCATTAGGA+AGG - chr7_3:73419827-73419846 Msa1122890:five_prime_UTR 25.0%
!!! GTGCATGCTTTTTAATTTTT+TGG - chr7_3:73419936-73419955 Msa1122890:intron 25.0%
! TTTGAGTATTCTTCATAGTT+GGG + chr7_3:73420536-73420555 None:intergenic 25.0%
! ATTTGAGTATTCTTCATAGT+TGG + chr7_3:73420537-73420556 None:intergenic 25.0%
!! GGAGAATTTAATCTACATTT+TGG - chr7_3:73420881-73420900 Msa1122890:intron 25.0%
!! TTTGCTGTATATAGATTCAT+TGG - chr7_3:73421087-73421106 Msa1122890:five_prime_UTR 25.0%
!! GATTTTTGTTTATAGTTGCG+TGG + chr7_3:73415045-73415064 None:intergenic 30.0%
! GTTTGCATATTTTGTAACGT+TGG - chr7_3:73415346-73415365 Msa1122890:CDS 30.0%
!!! CTTTTTTGGTCTGACATTTA+TGG - chr7_3:73415501-73415520 Msa1122890:CDS 30.0%
TGGAGCAATTATCATAACAT+GGG + chr7_3:73415695-73415714 None:intergenic 30.0%
ATGGAGCAATTATCATAACA+TGG + chr7_3:73415696-73415715 None:intergenic 30.0%
TGTTATGATAATTGCTCCAT+TGG - chr7_3:73415696-73415715 Msa1122890:CDS 30.0%
GTTATGATAATTGCTCCATT+GGG - chr7_3:73415697-73415716 Msa1122890:CDS 30.0%
ACAAATACACATTGCCAATT+TGG + chr7_3:73415728-73415747 None:intergenic 30.0%
AAAGTTTGAGAGAGAAAGTT+AGG + chr7_3:73415793-73415812 None:intergenic 30.0%
GAAAAATAAAAGCGAAGACA+AGG + chr7_3:73416071-73416090 None:intergenic 30.0%
TTGCAAATTGCATTCCTATT+TGG + chr7_3:73416112-73416131 None:intergenic 30.0%
!! TTATAACCGTTTTGGTCTTT+GGG - chr7_3:73416216-73416235 Msa1122890:intron 30.0%
TAATTAGACAATTCGATCTC+CGG + chr7_3:73416384-73416403 None:intergenic 30.0%
GAGATCGAATTGTCTAATTA+CGG - chr7_3:73416384-73416403 Msa1122890:CDS 30.0%
! CTCTTCTTTGAAAGACTTTA+TGG - chr7_3:73416492-73416511 Msa1122890:intron 30.0%
TATGGTGTATTGTTACAAAG+TGG - chr7_3:73416535-73416554 Msa1122890:intron 30.0%
ATTGTTGAACTTCTAAGTCT+GGG - chr7_3:73416558-73416577 Msa1122890:CDS 30.0%
CTTACCAAAGCTATTATTGT+TGG - chr7_3:73416735-73416754 Msa1122890:CDS 30.0%
GTATCCAACAATAATAGCTT+TGG + chr7_3:73416742-73416761 None:intergenic 30.0%
AGCTATTATTGTTGGATACT+TGG - chr7_3:73416743-73416762 Msa1122890:CDS 30.0%
GCTATTATTGTTGGATACTT+GGG - chr7_3:73416744-73416763 Msa1122890:CDS 30.0%
CTATTATTGTTGGATACTTG+GGG - chr7_3:73416745-73416764 Msa1122890:CDS 30.0%
GAAACAAAACATCCAATAGA+AGG + chr7_3:73416778-73416797 None:intergenic 30.0%
TTGTTCTCGTTCAAAATACT+CGG - chr7_3:73417021-73417040 Msa1122890:CDS 30.0%
TTAATTGGAATGCTCAACAA+GGG - chr7_3:73417113-73417132 Msa1122890:intron 30.0%
! CCAATTTAAAGTCCATTCAA+GGG + chr7_3:73417237-73417256 None:intergenic 30.0%
! ACCAATTTAAAGTCCATTCA+AGG + chr7_3:73417238-73417257 None:intergenic 30.0%
! AACAAACCGATTTCACAAAA+TGG + chr7_3:73417418-73417437 None:intergenic 30.0%
TTGTTTGTTTGAAGGATAGA+AGG - chr7_3:73417437-73417456 Msa1122890:intron 30.0%
ATAGTTAGTTGTATAGGAGT+TGG - chr7_3:73417564-73417583 Msa1122890:intron 30.0%
GATTGACATATGTTGTGATT+CGG - chr7_3:73417627-73417646 Msa1122890:intron 30.0%
GTAGCAAAAGTCATGTTTAA+AGG + chr7_3:73417708-73417727 None:intergenic 30.0%
! TTAAACATGACTTTTGCTAC+AGG - chr7_3:73417708-73417727 Msa1122890:intron 30.0%
ATCCAAAGACATTACAGAAA+AGG - chr7_3:73417762-73417781 Msa1122890:intron 30.0%
!! GATTTTTAGGGAATACAATG+AGG - chr7_3:73417931-73417950 Msa1122890:intron 30.0%
GAAGAGAAAATGGAAGAAAA+TGG + chr7_3:73417981-73418000 None:intergenic 30.0%
CAACAAAAGAGAAGAGAAAA+TGG + chr7_3:73417991-73418010 None:intergenic 30.0%
!! ACATAGTATAGAAGTGTCTA+TGG + chr7_3:73418055-73418074 None:intergenic 30.0%
AGTTATCCAAAAACCTTTGA+TGG - chr7_3:73418139-73418158 Msa1122890:intron 30.0%
TTATATACACAACCACTGAT+GGG + chr7_3:73418168-73418187 None:intergenic 30.0%
ATTATATACACAACCACTGA+TGG + chr7_3:73418169-73418188 None:intergenic 30.0%
CATGCATTCTCTGTTAATAT+CGG - chr7_3:73418194-73418213 Msa1122890:CDS 30.0%
ATTTATGAGTGACCACATTA+TGG - chr7_3:73418376-73418395 Msa1122890:intron 30.0%
ACTAGAATAACACCATAATG+TGG + chr7_3:73418391-73418410 None:intergenic 30.0%
! GCTATTGTTTGGTAGTATAA+AGG + chr7_3:73418543-73418562 None:intergenic 30.0%
CACAAGTTATTGATAAGCTT+TGG + chr7_3:73418694-73418713 None:intergenic 30.0%
ATGATAGATATGATAGGTGT+AGG + chr7_3:73418792-73418811 None:intergenic 30.0%
ATCAACAGAAGTTCATTACA+TGG + chr7_3:73418899-73418918 None:intergenic 30.0%
TTACTGAGTTCATAATGTCA+TGG - chr7_3:73418921-73418940 Msa1122890:CDS 30.0%
TATCATTGCAGATATTTGGT+CGG - chr7_3:73418979-73418998 Msa1122890:CDS 30.0%
! TGAATTTGAAACCTTATTCC+AGG - chr7_3:73419175-73419194 Msa1122890:intron 30.0%
! TGCTCATGTTTTTCTTTGTA+TGG - chr7_3:73419296-73419315 Msa1122890:CDS 30.0%
GATTTCACTGTAAATGTTGA+AGG - chr7_3:73419512-73419531 Msa1122890:CDS 30.0%
! ATATTTTCTGCCATAAGCTA+TGG + chr7_3:73419639-73419658 None:intergenic 30.0%
ACAATGTTTATACTCTCAGT+TGG - chr7_3:73419975-73419994 Msa1122890:intron 30.0%
TAGTACCAATCAAGAAGATA+GGG + chr7_3:73420401-73420420 None:intergenic 30.0%
!! GTTATTCCATATGGTTCTAA+TGG + chr7_3:73420461-73420480 None:intergenic 30.0%
TAACGTTCTGTTATTCCATA+TGG + chr7_3:73420470-73420489 None:intergenic 30.0%
! ATGACAAGTTTTCTGATAGA+GGG - chr7_3:73420768-73420787 Msa1122890:intron 30.0%
AAACAAAAAATGTGGGAAAG+GGG + chr7_3:73420983-73421002 None:intergenic 30.0%
CAAACAAAAAATGTGGGAAA+GGG + chr7_3:73420984-73421003 None:intergenic 30.0%
TTCCAGATAACAATTAGAGA+GGG + chr7_3:73421058-73421077 None:intergenic 30.0%
TTTCCAGATAACAATTAGAG+AGG + chr7_3:73421059-73421078 None:intergenic 30.0%
TATATAGATTCATTGGTGTG+AGG - chr7_3:73421094-73421113 Msa1122890:five_prime_UTR 30.0%
TTATAAAGTTTGCGTTCGGA+AGG + chr7_3:73414950-73414969 None:intergenic 35.0%
! TTTGCACAGAAATTTTGCCT+CGG + chr7_3:73415586-73415605 None:intergenic 35.0%
! ACAACTTTTCTCTCATGATC+AGG - chr7_3:73415913-73415932 Msa1122890:CDS 35.0%
! TTTTCTCTCATGATCAGGTA+TGG - chr7_3:73415918-73415937 Msa1122890:CDS 35.0%
! CAGGTATGGTTTTCATTAAC+CGG - chr7_3:73415932-73415951 Msa1122890:CDS 35.0%
TCATTAACCGGTAGAAATCT+TGG - chr7_3:73415944-73415963 Msa1122890:CDS 35.0%
ATCTAGACCAAGATTTCTAC+CGG + chr7_3:73415954-73415973 None:intergenic 35.0%
!! GTTTATTTGGGTTGCCAAAT+AGG - chr7_3:73416095-73416114 Msa1122890:intron 35.0%
!! GAACCTTGTTATAACCGTTT+TGG - chr7_3:73416208-73416227 Msa1122890:intron 35.0%
AGACCAAAACGGTTATAACA+AGG + chr7_3:73416214-73416233 None:intergenic 35.0%
!! GTTATAACCGTTTTGGTCTT+TGG - chr7_3:73416215-73416234 Msa1122890:intron 35.0%
!! TATAACCGTTTTGGTCTTTG+GGG - chr7_3:73416217-73416236 Msa1122890:intron 35.0%
TGTTCACAGACACTAATAGT+AGG + chr7_3:73416262-73416281 None:intergenic 35.0%
TTTACTTCATGATGATTCGC+CGG - chr7_3:73416362-73416381 Msa1122890:CDS 35.0%
TCGAATTGTCTAATTACGGA+AGG - chr7_3:73416388-73416407 Msa1122890:CDS 35.0%
CATATACACTTTCTCCATTG+AGG + chr7_3:73416449-73416468 None:intergenic 35.0%
! TGTAGAACCAATTGCTGATT+TGG - chr7_3:73416467-73416486 Msa1122890:intron 35.0%
AAGAGATCCAAATCAGCAAT+TGG + chr7_3:73416477-73416496 None:intergenic 35.0%
TATGGTTACTACTGTGAGAA+AGG - chr7_3:73416510-73416529 Msa1122890:intron 35.0%
ATGGTTACTACTGTGAGAAA+GGG - chr7_3:73416511-73416530 Msa1122890:intron 35.0%
GATTGTTGAACTTCTAAGTC+TGG - chr7_3:73416557-73416576 Msa1122890:CDS 35.0%
TTGTTGAACTTCTAAGTCTG+GGG - chr7_3:73416559-73416578 Msa1122890:CDS 35.0%
!!! TGGGGATTTTTTCCTTCTAT+TGG - chr7_3:73416763-73416782 Msa1122890:intron 35.0%
CTAAAATGCATTGAAGCAGT+TGG - chr7_3:73416886-73416905 Msa1122890:intron 35.0%
AGACAAAAACATGTGAACTG+TGG + chr7_3:73416920-73416939 None:intergenic 35.0%
ATGAAATTCAAACTATGCCC+TGG - chr7_3:73416979-73416998 Msa1122890:CDS 35.0%
TGAAATTCAAACTATGCCCT+GGG - chr7_3:73416980-73416999 Msa1122890:CDS 35.0%
CAGTCTCATGACTATATCAT+GGG + chr7_3:73417075-73417094 None:intergenic 35.0%
TCAGTCTCATGACTATATCA+TGG + chr7_3:73417076-73417095 None:intergenic 35.0%
ATATAGTCATGAGACTGATG+CGG - chr7_3:73417078-73417097 Msa1122890:CDS 35.0%
CTTAATTGGAATGCTCAACA+AGG - chr7_3:73417112-73417131 Msa1122890:intron 35.0%
TCAGGACTAGATTGAACTTT+CGG + chr7_3:73417182-73417201 None:intergenic 35.0%
AAAGTTCAATCTAGTCCTGA+TGG - chr7_3:73417182-73417201 Msa1122890:intron 35.0%
! CCCTTGAATGGACTTTAAAT+TGG - chr7_3:73417234-73417253 Msa1122890:CDS 35.0%
TCCTACATAGCATGTTTGAT+TGG - chr7_3:73417261-73417280 Msa1122890:CDS 35.0%
ACCAATCAAACATGCTATGT+AGG + chr7_3:73417265-73417284 None:intergenic 35.0%
CACTCTGATTGTACAACTAA+AGG + chr7_3:73417309-73417328 None:intergenic 35.0%
! CGGTTTGTTTGTTTGTTTGA+AGG - chr7_3:73417429-73417448 Msa1122890:intron 35.0%
! CATCCTTATATAAGGTACCA+TGG + chr7_3:73417477-73417496 None:intergenic 35.0%
! AGCCTTTTCTGTAATGTCTT+TGG + chr7_3:73417767-73417786 None:intergenic 35.0%
GACATTACAGAAAAGGCTTA+TGG - chr7_3:73417769-73417788 Msa1122890:intron 35.0%
AGAAAAGGCTTATGGTAGTT+GGG - chr7_3:73417777-73417796 Msa1122890:intron 35.0%
AGCATGAATATGACAAGGAA+TGG + chr7_3:73417824-73417843 None:intergenic 35.0%
ATTCCTTGTCATATTCATGC+TGG - chr7_3:73417823-73417842 Msa1122890:intron 35.0%
!! ACTTGTCTAGGTGGATTTTT+AGG - chr7_3:73417918-73417937 Msa1122890:intron 35.0%
!! CTTGTCTAGGTGGATTTTTA+GGG - chr7_3:73417919-73417938 Msa1122890:intron 35.0%
!!! CTTCTCTTTTGTTGCTTTCA+TGG - chr7_3:73417997-73418016 Msa1122890:intron 35.0%
TATCCAAAAACCTTTGATGG+AGG - chr7_3:73418142-73418161 Msa1122890:intron 35.0%
ATTAACAGAGAATGCATGGA+TGG + chr7_3:73418192-73418211 None:intergenic 35.0%
CGATATTAACAGAGAATGCA+TGG + chr7_3:73418196-73418215 None:intergenic 35.0%
TTCTAGTCACCTAGCATTAA+CGG - chr7_3:73418404-73418423 Msa1122890:intron 35.0%
AAGAATAAGCCGTTAATGCT+AGG + chr7_3:73418416-73418435 None:intergenic 35.0%
AATGTCATATGCAACCTACA+TGG + chr7_3:73418565-73418584 None:intergenic 35.0%
! TTCATATCTTTTGTATCCGG+TGG - chr7_3:73418819-73418838 Msa1122890:CDS 35.0%
!! TATTTGGTCGGAACTTGTTT+TGG - chr7_3:73418991-73419010 Msa1122890:CDS 35.0%
!!! TTTTGGTATGCTGCTGTTTT+TGG - chr7_3:73419008-73419027 Msa1122890:CDS 35.0%
GAACTATAACTGCTATTAGC+CGG - chr7_3:73419030-73419049 Msa1122890:CDS 35.0%
AACTATAACTGCTATTAGCC+GGG - chr7_3:73419031-73419050 Msa1122890:CDS 35.0%
CACATTATATGCCAAAGAGA+TGG - chr7_3:73419120-73419139 Msa1122890:intron 35.0%
AAGAAAAACATGAGCACGAA+AGG + chr7_3:73419292-73419311 None:intergenic 35.0%
! TACAGCAATGATGTTACTTG+AGG - chr7_3:73419326-73419345 Msa1122890:CDS 35.0%
! AATGATGTTACTTGAGGAGA+TGG - chr7_3:73419332-73419351 Msa1122890:CDS 35.0%
ACAGAAGTAAATATGGAGTG+AGG + chr7_3:73419368-73419387 None:intergenic 35.0%
ACTTCTGTTTATTGTCCCAA+AGG - chr7_3:73419380-73419399 Msa1122890:CDS 35.0%
CAAGTACGAAAATGACCTTT+GGG + chr7_3:73419398-73419417 None:intergenic 35.0%
CTGTGAAATGCAGTATACTT+GGG + chr7_3:73419438-73419457 None:intergenic 35.0%
ACTGTGAAATGCAGTATACT+TGG + chr7_3:73419439-73419458 None:intergenic 35.0%
! ACTGTAAATGTTGAAGGTGT+TGG - chr7_3:73419518-73419537 Msa1122890:CDS 35.0%
!! CTGTAAATGTTGAAGGTGTT+GGG - chr7_3:73419519-73419538 Msa1122890:CDS 35.0%
GTACATCTGTAACATTCTCT+AGG - chr7_3:73419590-73419609 Msa1122890:CDS 35.0%
TGTCTCAATTCCATAGCTTA+TGG - chr7_3:73419626-73419645 Msa1122890:CDS 35.0%
!! ACCTTTGATTTTCAAGAGCA+TGG - chr7_3:73419694-73419713 Msa1122890:CDS 35.0%
TCCATGCTCTTGAAAATCAA+AGG + chr7_3:73419698-73419717 None:intergenic 35.0%
AGATGGAGAAATCATTGTTG+AGG - chr7_3:73419776-73419795 Msa1122890:CDS 35.0%
GAGAAATCATTGTTGAGGTA+TGG - chr7_3:73419781-73419800 Msa1122890:CDS 35.0%
TCTGAGAAAAGAGTTGACTA+TGG + chr7_3:73420027-73420046 None:intergenic 35.0%
TTCAGAGTAGTTATCCATCA+TGG - chr7_3:73420135-73420154 Msa1122890:intron 35.0%
TCAGAGTAGTTATCCATCAT+GGG - chr7_3:73420136-73420155 Msa1122890:intron 35.0%
ATCTTAGAACATTCAGAGAG+CGG - chr7_3:73420192-73420211 Msa1122890:five_prime_UTR 35.0%
ACAGAAACAGGTTTATATCC+AGG - chr7_3:73420297-73420316 Msa1122890:intron 35.0%
CAGAAACAGGTTTATATCCA+GGG - chr7_3:73420298-73420317 Msa1122890:intron 35.0%
AGTACCAATCAAGAAGATAG+GGG + chr7_3:73420400-73420419 None:intergenic 35.0%
GTAGTACCAATCAAGAAGAT+AGG + chr7_3:73420402-73420421 None:intergenic 35.0%
GATGTTCCATTAGAACCATA+TGG - chr7_3:73420452-73420471 Msa1122890:intron 35.0%
ATACTCAAATGAGTATCACG+AGG - chr7_3:73420547-73420566 Msa1122890:intron 35.0%
GTTGTTTGGTCATTGAAATC+TGG + chr7_3:73420737-73420756 None:intergenic 35.0%
! CATGACAAGTTTTCTGATAG+AGG - chr7_3:73420767-73420786 Msa1122890:intron 35.0%
! ACCAAGAACAACACTTTTAC+TGG - chr7_3:73420804-73420823 Msa1122890:intron 35.0%
!! TCCAGTAAAAGTGTTGTTCT+TGG + chr7_3:73420808-73420827 None:intergenic 35.0%
AACAATGACAGATGACTTAG+AGG - chr7_3:73420856-73420875 Msa1122890:intron 35.0%
! GAATTTATAGTGGGAGTTTC+TGG + chr7_3:73420926-73420945 None:intergenic 35.0%
CCAAACAAAAAATGTGGGAA+AGG + chr7_3:73420985-73421004 None:intergenic 35.0%
!!! CCTTTCCCACATTTTTTGTT+TGG - chr7_3:73420982-73421001 Msa1122890:five_prime_UTR 35.0%
!!! TCCCACATTTTTTGTTTGGA+AGG - chr7_3:73420986-73421005 Msa1122890:five_prime_UTR 35.0%
CCCTTCCAAACAAAAAATGT+GGG + chr7_3:73420990-73421009 None:intergenic 35.0%
!!! CCCACATTTTTTGTTTGGAA+GGG - chr7_3:73420987-73421006 Msa1122890:five_prime_UTR 35.0%
ACCCTTCCAAACAAAAAATG+TGG + chr7_3:73420991-73421010 None:intergenic 35.0%
!! GAAGGGTGCTTTCAATTAAA+TGG - chr7_3:73421004-73421023 Msa1122890:five_prime_UTR 35.0%
! AGGAGATGAGCATAGGTTTT+TGG + chr7_3:73414930-73414949 None:intergenic 40.0%
AGATGATGAAACAGTAGCGA+AGG + chr7_3:73415114-73415133 None:intergenic 40.0%
GAGACACAAATACAGAAACG+TGG + chr7_3:73415240-73415259 None:intergenic 40.0%
! TCCATTGGGTTGTTCCAAAT+TGG - chr7_3:73415711-73415730 Msa1122890:CDS 40.0%
CAAATATGGGCAACTTGACA+AGG + chr7_3:73416034-73416053 None:intergenic 40.0%
! CTTGTCAAGTTGCCCATATT+TGG - chr7_3:73416032-73416051 Msa1122890:intron 40.0%
ATGAATCGCCAGCCAAATAT+GGG + chr7_3:73416047-73416066 None:intergenic 40.0%
TATGAATCGCCAGCCAAATA+TGG + chr7_3:73416048-73416067 None:intergenic 40.0%
ACAATGTTTAGCAGACCAAG+TGG - chr7_3:73416279-73416298 Msa1122890:intron 40.0%
CTCCATTGAGGAAATCTGAA+GGG + chr7_3:73416437-73416456 None:intergenic 40.0%
TCTCCATTGAGGAAATCTGA+AGG + chr7_3:73416438-73416457 None:intergenic 40.0%
ACTACTGTGAGAAAGGGTTA+TGG - chr7_3:73416517-73416536 Msa1122890:intron 40.0%
! CCATCCCACATTTTGCATTA+CGG + chr7_3:73416638-73416657 None:intergenic 40.0%
TAAGTGTGAGTGGGGTTAAA+GGG + chr7_3:73416719-73416738 None:intergenic 40.0%
!! TAGCTTTGGTAAGTGTGAGT+GGG + chr7_3:73416728-73416747 None:intergenic 40.0%
!! ATAGCTTTGGTAAGTGTGAG+TGG + chr7_3:73416729-73416748 None:intergenic 40.0%
TTAGTTGAGCAAAGAATCGC+AGG + chr7_3:73416800-73416819 None:intergenic 40.0%
GCGATTCTTTGCTCAACTAA+AGG - chr7_3:73416800-73416819 Msa1122890:intron 40.0%
CTTACCTGCTGTAGAAAAAC+TGG + chr7_3:73416842-73416861 None:intergenic 40.0%
!! TTGTCAACAATTTTGGCCCA+GGG + chr7_3:73416999-73417018 None:intergenic 40.0%
!! TTTGTCAACAATTTTGGCCC+AGG + chr7_3:73417000-73417019 None:intergenic 40.0%
CGGAAGGAGAACTACTTAAT+TGG - chr7_3:73417098-73417117 Msa1122890:intron 40.0%
TTGCTTTCCCCATTTCACAA+TGG - chr7_3:73417141-73417160 Msa1122890:intron 40.0%
CTGGAAACCATTGTGAAATG+GGG + chr7_3:73417151-73417170 None:intergenic 40.0%
CCTGGAAACCATTGTGAAAT+GGG + chr7_3:73417152-73417171 None:intergenic 40.0%
ACCTGGAAACCATTGTGAAA+TGG + chr7_3:73417153-73417172 None:intergenic 40.0%
CAGGACTAGATTGAACTTTC+GGG + chr7_3:73417181-73417200 None:intergenic 40.0%
AAACGATATTGTGCTCCATC+AGG + chr7_3:73417200-73417219 None:intergenic 40.0%
TACTTACCAAGACCCTTGAA+TGG - chr7_3:73417222-73417241 Msa1122890:CDS 40.0%
TAAAGTCCATTCAAGGGTCT+TGG + chr7_3:73417231-73417250 None:intergenic 40.0%
AGGACTATTTAGATGCTCCA+TGG - chr7_3:73417457-73417476 Msa1122890:intron 40.0%
GCTCCATGGTACCTTATATA+AGG - chr7_3:73417471-73417490 Msa1122890:intron 40.0%
! ACAGGAACTTTTGTGTCAGA+AGG - chr7_3:73417726-73417745 Msa1122890:intron 40.0%
! CAGGAACTTTTGTGTCAGAA+GGG - chr7_3:73417727-73417746 Msa1122890:intron 40.0%
CAGAAAAGGCTTATGGTAGT+TGG - chr7_3:73417776-73417795 Msa1122890:intron 40.0%
ATGCCAGCATGAATATGACA+AGG + chr7_3:73417829-73417848 None:intergenic 40.0%
GAAGATGGTCAAACTTGTCT+AGG - chr7_3:73417906-73417925 Msa1122890:intron 40.0%
CTACCAAACAATAGCCATGT+AGG - chr7_3:73418548-73418567 Msa1122890:intron 40.0%
CAACCTACATGGCTATTGTT+TGG + chr7_3:73418554-73418573 None:intergenic 40.0%
TATATGTCTTCTGCTGTACC+TGG - chr7_3:73418622-73418641 Msa1122890:intron 40.0%
AATGTCATGGCAGTCGTTAA+AGG - chr7_3:73418934-73418953 Msa1122890:CDS 40.0%
ACCATAGATATTGTTCCCTC+GGG + chr7_3:73419089-73419108 None:intergenic 40.0%
CACCATAGATATTGTTCCCT+CGG + chr7_3:73419090-73419109 None:intergenic 40.0%
TGGCAAAGAAATTACTGACG+TGG - chr7_3:73419145-73419164 Msa1122890:intron 40.0%
TTATTCCAGGTATTCTGCCT+GGG - chr7_3:73419188-73419207 Msa1122890:intron 40.0%
CCAAGTACGAAAATGACCTT+TGG + chr7_3:73419399-73419418 None:intergenic 40.0%
!! CCAAAGGTCATTTTCGTACT+TGG - chr7_3:73419396-73419415 Msa1122890:CDS 40.0%
GAGCATGGAAACTCTCATTA+TGG - chr7_3:73419709-73419728 Msa1122890:CDS 40.0%
!! TGCTACGAGAGGCATTATAT+GGG + chr7_3:73419738-73419757 None:intergenic 40.0%
TCATTGTTGAGGTATGGTCT+TGG - chr7_3:73419787-73419806 Msa1122890:CDS 40.0%
! TAAAAAGCATGCACACACAG+AGG + chr7_3:73419930-73419949 None:intergenic 40.0%
! TGAGTATTTGGTTCCCATGA+TGG + chr7_3:73420152-73420171 None:intergenic 40.0%
ATCATGGGAACCAAATACTC+AGG - chr7_3:73420151-73420170 Msa1122890:intron 40.0%
TCATGGGAACCAAATACTCA+GGG - chr7_3:73420152-73420171 Msa1122890:intron 40.0%
! TTTTGCAACTGGCAATCACT+TGG - chr7_3:73420337-73420356 Msa1122890:intron 40.0%
ATAGGGGTGATTATTCTGGT+TGG + chr7_3:73420384-73420403 None:intergenic 40.0%
GAAGATAGGGGTGATTATTC+TGG + chr7_3:73420388-73420407 None:intergenic 40.0%
ATCACCCCTATCTTCTTGAT+TGG - chr7_3:73420393-73420412 Msa1122890:intron 40.0%
!! TCATTCTGTGTCAAGTTGGA+AGG + chr7_3:73420512-73420531 None:intergenic 40.0%
CAAATGAGTATCACGAGGAT+CGG - chr7_3:73420552-73420571 Msa1122890:intron 40.0%
AAATGAGTATCACGAGGATC+GGG - chr7_3:73420553-73420572 Msa1122890:intron 40.0%
GTTTGGTCATTGAAATCTGG+AGG + chr7_3:73420734-73420753 None:intergenic 40.0%
! TTTATAGTGGGAGTTTCTGG+AGG + chr7_3:73420923-73420942 None:intergenic 40.0%
! GCAGTGCTGGAATTTATAGT+GGG + chr7_3:73420935-73420954 None:intergenic 40.0%
! AGCAGTGCTGGAATTTATAG+TGG + chr7_3:73420936-73420955 None:intergenic 40.0%
GTCCCTCTCTAATTGTTATC+TGG - chr7_3:73421053-73421072 Msa1122890:five_prime_UTR 40.0%
AATGAACCTCAGCTTGATGT+TGG - chr7_3:73421128-73421147 Msa1122890:five_prime_UTR 40.0%
TAAGTTCCAACATCAAGCTG+AGG + chr7_3:73421137-73421156 None:intergenic 40.0%
TCCTTGCATCTGAAAATGGA+AGG + chr7_3:73421177-73421196 None:intergenic 40.0%
GATGAAACAGTAGCGAAGGA+AGG + chr7_3:73415110-73415129 None:intergenic 45.0%
GAATTGAAGTTAGCAGTCCG+AGG - chr7_3:73415566-73415585 Msa1122890:CDS 45.0%
! GCCAATTTGGAACAACCCAA+TGG + chr7_3:73415715-73415734 None:intergenic 45.0%
! TCAAGTTGCCCATATTTGGC+TGG - chr7_3:73416036-73416055 Msa1122890:intron 45.0%
CCATTCCCCAAAGACCAAAA+CGG + chr7_3:73416225-73416244 None:intergenic 45.0%
! TTGGTCTTTGGGGAATGGAT+TGG - chr7_3:73416227-73416246 Msa1122890:intron 45.0%
TTTAGCAGACCAAGTGGTTC+CGG - chr7_3:73416285-73416304 Msa1122890:intron 45.0%
AGCCCTTCAGATTTCCTCAA+TGG - chr7_3:73416432-73416451 Msa1122890:intron 45.0%
! GGGTTCACCATATGCTTTTC+AGG - chr7_3:73416579-73416598 Msa1122890:CDS 45.0%
GGCTCCGTAATGCAAAATGT+GGG - chr7_3:73416631-73416650 Msa1122890:intron 45.0%
CCGTAATGCAAAATGTGGGA+TGG - chr7_3:73416635-73416654 Msa1122890:intron 45.0%
GGAATTAAGCCCTGTGATCT+TGG - chr7_3:73416672-73416691 Msa1122890:intron 45.0%
GCTTCTTTGCCAAGATCACA+GGG + chr7_3:73416684-73416703 None:intergenic 45.0%
AGCTTCTTTGCCAAGATCAC+AGG + chr7_3:73416685-73416704 None:intergenic 45.0%
GTAAGTGTGAGTGGGGTTAA+AGG + chr7_3:73416720-73416739 None:intergenic 45.0%
! AGCTTTGGTAAGTGTGAGTG+GGG + chr7_3:73416727-73416746 None:intergenic 45.0%
ACCTGCTGTAGAAAAACTGG+CGG + chr7_3:73416839-73416858 None:intergenic 45.0%
TCGGAAACTATGTGTGCTGA+AGG - chr7_3:73417040-73417059 Msa1122890:CDS 45.0%
CCCATTTCACAATGGTTTCC+AGG - chr7_3:73417149-73417168 Msa1122890:intron 45.0%
TGCTGGCATATCTCTTTCTG+AGG - chr7_3:73417840-73417859 Msa1122890:intron 45.0%
TTCGAGATGATGCTGTGCTT+GGG + chr7_3:73417889-73417908 None:intergenic 45.0%
GATGGTCAAACTTGTCTAGG+TGG - chr7_3:73417909-73417928 Msa1122890:intron 45.0%
TATAGGTCGACCATCTCTTC+AGG - chr7_3:73418715-73418734 Msa1122890:intron 45.0%
TAATCCGATGCCTGAAGAGA+TGG + chr7_3:73418728-73418747 None:intergenic 45.0%
TGCAATTGCAGATGAGCTTC+TGG - chr7_3:73419055-73419074 Msa1122890:CDS 45.0%
TCCCGAGGGAACAATATCTA+TGG - chr7_3:73419085-73419104 Msa1122890:CDS 45.0%
CGAGGGAACAATATCTATGG+TGG - chr7_3:73419088-73419107 Msa1122890:CDS 45.0%
TATATGCCAAAGAGATGGCG+TGG - chr7_3:73419125-73419144 Msa1122890:intron 45.0%
CAGGCAGAATACCTGGAATA+AGG + chr7_3:73419189-73419208 None:intergenic 45.0%
CTTATTCCAGGTATTCTGCC+TGG - chr7_3:73419187-73419206 Msa1122890:intron 45.0%
TATTCCAGGTATTCTGCCTG+GGG - chr7_3:73419189-73419208 Msa1122890:intron 45.0%
!! GCTACGAGAGGCATTATATG+GGG + chr7_3:73419737-73419756 None:intergenic 45.0%
!! CTGCTACGAGAGGCATTATA+TGG + chr7_3:73419739-73419758 None:intergenic 45.0%
ATAATGCCTCTCGTAGCAGA+AGG - chr7_3:73419740-73419759 Msa1122890:CDS 45.0%
AAGGAGTTCACAGGGAAAGA+TGG - chr7_3:73419759-73419778 Msa1122890:CDS 45.0%
CATGGGAACCAAATACTCAG+GGG - chr7_3:73420153-73420172 Msa1122890:intron 45.0%
AACTGCTTCCCCTGAGTATT+TGG + chr7_3:73420164-73420183 None:intergenic 45.0%
GAGCGGAAGTTATCAGTACA+TGG - chr7_3:73420209-73420228 Msa1122890:intron 45.0%
!! CCAGTTGCAAAAGTGCTGTA+TGG + chr7_3:73420329-73420348 None:intergenic 45.0%
! CCATACAGCACTTTTGCAAC+TGG - chr7_3:73420326-73420345 Msa1122890:intron 45.0%
GCAATCACTTGGATTCGTTG+TGG - chr7_3:73420348-73420367 Msa1122890:intron 45.0%
TCTCTTGAAGCTGCATCATG+AGG + chr7_3:73420434-73420453 None:intergenic 45.0%
GGGTTCATTCTGTGTCAAGT+TGG + chr7_3:73420516-73420535 None:intergenic 45.0%
CTAAAGCTCTCCCTAAGGAT+GGG + chr7_3:73420611-73420630 None:intergenic 45.0%
ACTAAAGCTCTCCCTAAGGA+TGG + chr7_3:73420612-73420631 None:intergenic 45.0%
! GTTTTCTGATAGAGGGTCAG+AGG - chr7_3:73420775-73420794 Msa1122890:intron 45.0%
ATGACAGATGACTTAGAGGC+AGG - chr7_3:73420860-73420879 Msa1122890:intron 45.0%
TACTCAAAAGCTAGCAGTGC+TGG + chr7_3:73420948-73420967 None:intergenic 45.0%
AGAGAGGGACAATCATGACT+TGG + chr7_3:73421043-73421062 None:intergenic 45.0%
! GCCTTCCATTTTCAGATGCA+AGG - chr7_3:73421173-73421192 Msa1122890:five_prime_UTR 45.0%
GTTCGGAAGGAGATGAGCAT+AGG + chr7_3:73414937-73414956 None:intergenic 50.0%
TTAGGTTCAGCTCACCCCTT+TGG - chr7_3:73415867-73415886 Msa1122890:CDS 50.0%
TAGGTTCAGCTCACCCCTTT+GGG - chr7_3:73415868-73415887 Msa1122890:CDS 50.0%
TCAACGCCAAAGTCCCAAAG+GGG + chr7_3:73415884-73415903 None:intergenic 50.0%
GTCAACGCCAAAGTCCCAAA+GGG + chr7_3:73415885-73415904 None:intergenic 50.0%
TGTCAACGCCAAAGTCCCAA+AGG + chr7_3:73415886-73415905 None:intergenic 50.0%
!! CCGTTTTGGTCTTTGGGGAA+TGG - chr7_3:73416222-73416241 Msa1122890:intron 50.0%
!! CTAAAAGCACCGGAACCACT+TGG + chr7_3:73416297-73416316 None:intergenic 50.0%
GGGCTCCGTAATGCAAAATG+TGG - chr7_3:73416630-73416649 Msa1122890:intron 50.0%
GGGATGGATGCTGTTGAATC+TGG - chr7_3:73416651-73416670 Msa1122890:intron 50.0%
! TCCGCCAGTTTTTCTACAGC+AGG - chr7_3:73416835-73416854 Msa1122890:intron 50.0%
AGTCATGAGACTGATGCGGA+AGG - chr7_3:73417082-73417101 Msa1122890:CDS 50.0%
TCACAATGGTTTCCAGGTGC+TGG - chr7_3:73417155-73417174 Msa1122890:intron 50.0%
CTTCGAGATGATGCTGTGCT+TGG + chr7_3:73417890-73417909 None:intergenic 50.0%
GCACAGCATCATCTCGAAGA+TGG - chr7_3:73417891-73417910 Msa1122890:intron 50.0%
! GGGCCTCCATCAAAGGTTTT+TGG + chr7_3:73418148-73418167 None:intergenic 50.0%
TCGACCATCTCTTCAGGCAT+CGG - chr7_3:73418721-73418740 Msa1122890:intron 50.0%
CAGAATTGCAGCAAAGCCAC+CGG + chr7_3:73418838-73418857 None:intergenic 50.0%
!! CTTCTGGTCTTAGATCCCGA+GGG - chr7_3:73419071-73419090 Msa1122890:CDS 50.0%
TCTTTGCCACGCCATCTCTT+TGG + chr7_3:73419134-73419153 None:intergenic 50.0%
! ATGTATTGATCGGACACCCC+AGG + chr7_3:73419208-73419227 None:intergenic 50.0%
!! AAGGTGTTGGGCATGTTTGC+AGG - chr7_3:73419531-73419550 Msa1122890:CDS 50.0%
GGCATGTTTGCAGGTTAGCA+TGG - chr7_3:73419540-73419559 Msa1122890:CDS 50.0%
TGAACTCCTTCTGCTACGAG+AGG + chr7_3:73419749-73419768 None:intergenic 50.0%
TCGTAGCAGAAGGAGTTCAC+AGG - chr7_3:73419750-73419769 Msa1122890:CDS 50.0%
CGTAGCAGAAGGAGTTCACA+GGG - chr7_3:73419751-73419770 Msa1122890:CDS 50.0%
CATCTTCCCCTCCTAGAATG+TGG - chr7_3:73420243-73420262 Msa1122890:intron 50.0%
TTCCCCTCCTAGAATGTGGA+GGG - chr7_3:73420247-73420266 Msa1122890:intron 50.0%
! TACCCCTCCACATTCTAGGA+GGG + chr7_3:73420253-73420272 None:intergenic 50.0%
TCTTCATCCCCTGCCGTATT+GGG + chr7_3:73420278-73420297 None:intergenic 50.0%
CAGGGGATGAAGACAGAAAC+AGG - chr7_3:73420285-73420304 Msa1122890:intron 50.0%
AGTGCTGTATGGCATTTCCC+TGG + chr7_3:73420318-73420337 None:intergenic 50.0%
!! GGAAGGCATCGAATAGTCTC+TGG + chr7_3:73420495-73420514 None:intergenic 50.0%
ATCGGGCTGCATCTCAACTT+GGG - chr7_3:73420570-73420589 Msa1122890:intron 50.0%
CTCATCAGCTCCCATCCTTA+GGG - chr7_3:73420598-73420617 Msa1122890:intron 50.0%
CCTGACTAAAGCTCTCCCTA+AGG + chr7_3:73420616-73420635 None:intergenic 50.0%
! CCTTAGGGAGAGCTTTAGTC+AGG - chr7_3:73420613-73420632 Msa1122890:intron 50.0%
TTCTAGCCCACCAATGGCTT+CGG + chr7_3:73420670-73420689 None:intergenic 50.0%
GGGGTCCTTGCATCTGAAAA+TGG + chr7_3:73421181-73421200 None:intergenic 50.0%
AGGACCCCAGCAAAATAGTC+TGG - chr7_3:73421193-73421212 Msa1122890:five_prime_UTR 50.0%
!! AGCTCACCCCTTTGGGACTT+TGG - chr7_3:73415875-73415894 Msa1122890:CDS 55.0%
GGCGCGTCATCTTTGACTAG+AGG - chr7_3:73416339-73416358 Msa1122890:CDS 55.0%
TACGGAAGGATCCCAAGTCC+AGG - chr7_3:73416402-73416421 Msa1122890:intron 55.0%
GGCTCTCACTTCCTGGACTT+GGG + chr7_3:73416416-73416435 None:intergenic 55.0%
TCTGAAGGGCTCTCACTTCC+TGG + chr7_3:73416423-73416442 None:intergenic 55.0%
! CACTGATGGGCCTCCATCAA+AGG + chr7_3:73418155-73418174 None:intergenic 55.0%
CTTTGATGGAGGCCCATCAG+TGG - chr7_3:73418153-73418172 Msa1122890:CDS 55.0%
GCTCATCTGCAATTGCAGCC+CGG + chr7_3:73419052-73419071 None:intergenic 55.0%
!! GCTTCTGGTCTTAGATCCCG+AGG - chr7_3:73419070-73419089 Msa1122890:CDS 55.0%
CTTCCCCTCCTAGAATGTGG+AGG - chr7_3:73420246-73420265 Msa1122890:intron 55.0%
TCCCCTCCTAGAATGTGGAG+GGG - chr7_3:73420248-73420267 Msa1122890:intron 55.0%
! ACCCCTCCACATTCTAGGAG+GGG + chr7_3:73420252-73420271 None:intergenic 55.0%
CTACCCCTCCACATTCTAGG+AGG + chr7_3:73420254-73420273 None:intergenic 55.0%
GGACTACCCCTCCACATTCT+AGG + chr7_3:73420257-73420276 None:intergenic 55.0%
GTGGAGGGGTAGTCCCAATA+CGG - chr7_3:73420262-73420281 Msa1122890:intron 55.0%
GTCTTCATCCCCTGCCGTAT+TGG + chr7_3:73420279-73420298 None:intergenic 55.0%
GATCGGGCTGCATCTCAACT+TGG - chr7_3:73420569-73420588 Msa1122890:intron 55.0%
TCGGGCTGCATCTCAACTTG+GGG - chr7_3:73420571-73420590 Msa1122890:intron 55.0%
CCTAAGGATGGGAGCTGATG+AGG + chr7_3:73420600-73420619 None:intergenic 55.0%
CCTCATCAGCTCCCATCCTT+AGG - chr7_3:73420597-73420616 Msa1122890:intron 55.0%
!! CAATGGCTTCGGGTTGTGTG+GGG + chr7_3:73420659-73420678 None:intergenic 55.0%
!! CCAATGGCTTCGGGTTGTGT+GGG + chr7_3:73420660-73420679 None:intergenic 55.0%
!! ACCAATGGCTTCGGGTTGTG+TGG + chr7_3:73420661-73420680 None:intergenic 55.0%
ACACAACCCGAAGCCATTGG+TGG - chr7_3:73420660-73420679 Msa1122890:intron 55.0%
CACAACCCGAAGCCATTGGT+GGG - chr7_3:73420661-73420680 Msa1122890:intron 55.0%
TCTAGCCCACCAATGGCTTC+GGG + chr7_3:73420669-73420688 None:intergenic 55.0%
GACGACTTCTAGCCCACCAA+TGG + chr7_3:73420676-73420695 None:intergenic 55.0%
!! GGTGGGCTAGAAGTCGTCTA+CGG - chr7_3:73420678-73420697 Msa1122890:intron 55.0%
GCTAGAAGTCGTCTACGGAG+TGG - chr7_3:73420683-73420702 Msa1122890:intron 55.0%
TCTACGGAGTGGACAAGCTC+AGG - chr7_3:73420694-73420713 Msa1122890:intron 55.0%
GGGCTCTCACTTCCTGGACT+TGG + chr7_3:73416417-73416436 None:intergenic 60.0%
TGAACTTTCGGGCCAGCACC+TGG + chr7_3:73417170-73417189 None:intergenic 60.0%
GACACCCCAGGCAGAATACC+TGG + chr7_3:73419196-73419215 None:intergenic 60.0%
AGGGGTAGTCCCAATACGGC+AGG - chr7_3:73420266-73420285 Msa1122890:intron 60.0%
GGGGTAGTCCCAATACGGCA+GGG - chr7_3:73420267-73420286 Msa1122890:intron 60.0%
GGGTAGTCCCAATACGGCAG+GGG - chr7_3:73420268-73420287 Msa1122890:intron 60.0%
CCCACACAACCCGAAGCCAT+TGG - chr7_3:73420657-73420676 Msa1122890:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 73414880 73421216 73414880 ID=Msa1122890;Name=Msa1122890
chr7_3 mRNA 73414880 73421216 73414880 ID=Msa1122890-mRNA-1;Parent=Msa1122890;Name=Msa1122890-mRNA-1;_AED=0.05;_eAED=0.05;_QI=415|1|1|1|0.8|0.72|11|252|865
chr7_3 exon 73414880 73415963 73414880 ID=Msa1122890-mRNA-1:exon:19244;Parent=Msa1122890-mRNA-1
chr7_3 exon 73416299 73416409 73416299 ID=Msa1122890-mRNA-1:exon:19243;Parent=Msa1122890-mRNA-1
chr7_3 exon 73416544 73416614 73416544 ID=Msa1122890-mRNA-1:exon:19242;Parent=Msa1122890-mRNA-1
chr7_3 exon 73416695 73416772 73416695 ID=Msa1122890-mRNA-1:exon:19241;Parent=Msa1122890-mRNA-1
chr7_3 exon 73416900 73417106 73416900 ID=Msa1122890-mRNA-1:exon:19240;Parent=Msa1122890-mRNA-1
chr7_3 exon 73417197 73417376 73417197 ID=Msa1122890-mRNA-1:exon:19239;Parent=Msa1122890-mRNA-1
chr7_3 exon 73418144 73418366 73418144 ID=Msa1122890-mRNA-1:exon:19238;Parent=Msa1122890-mRNA-1
chr7_3 exon 73418814 73419134 73418814 ID=Msa1122890-mRNA-1:exon:19237;Parent=Msa1122890-mRNA-1
chr7_3 exon 73419240 73419887 73419240 ID=Msa1122890-mRNA-1:exon:19236;Parent=Msa1122890-mRNA-1
chr7_3 exon 73420162 73420225 73420162 ID=Msa1122890-mRNA-1:exon:19235;Parent=Msa1122890-mRNA-1
chr7_3 exon 73420939 73421216 73420939 ID=Msa1122890-mRNA-1:exon:19234;Parent=Msa1122890-mRNA-1
chr7_3 five_prime_UTR 73420939 73421216 73420939 ID=Msa1122890-mRNA-1:five_prime_utr;Parent=Msa1122890-mRNA-1
chr7_3 five_prime_UTR 73420162 73420225 73420162 ID=Msa1122890-mRNA-1:five_prime_utr;Parent=Msa1122890-mRNA-1
chr7_3 five_prime_UTR 73419815 73419887 73419815 ID=Msa1122890-mRNA-1:five_prime_utr;Parent=Msa1122890-mRNA-1
chr7_3 CDS 73419240 73419814 73419240 ID=Msa1122890-mRNA-1:cds;Parent=Msa1122890-mRNA-1
chr7_3 CDS 73418814 73419134 73418814 ID=Msa1122890-mRNA-1:cds;Parent=Msa1122890-mRNA-1
chr7_3 CDS 73418144 73418366 73418144 ID=Msa1122890-mRNA-1:cds;Parent=Msa1122890-mRNA-1
chr7_3 CDS 73417197 73417376 73417197 ID=Msa1122890-mRNA-1:cds;Parent=Msa1122890-mRNA-1
chr7_3 CDS 73416900 73417106 73416900 ID=Msa1122890-mRNA-1:cds;Parent=Msa1122890-mRNA-1
chr7_3 CDS 73416695 73416772 73416695 ID=Msa1122890-mRNA-1:cds;Parent=Msa1122890-mRNA-1
chr7_3 CDS 73416544 73416614 73416544 ID=Msa1122890-mRNA-1:cds;Parent=Msa1122890-mRNA-1
chr7_3 CDS 73416299 73416409 73416299 ID=Msa1122890-mRNA-1:cds;Parent=Msa1122890-mRNA-1
chr7_3 CDS 73415132 73415963 73415132 ID=Msa1122890-mRNA-1:cds;Parent=Msa1122890-mRNA-1
chr7_3 three_prime_UTR 73414880 73415131 73414880 ID=Msa1122890-mRNA-1:three_prime_utr;Parent=Msa1122890-mRNA-1
Gene Sequence

>Msa1122890

ATGTTTAGCAGACCAAGTGGTTCCGGTGCTTTTAGTATATTCAAATGGAAACAGAAAGGCGCGTCATCTTTGACTAGAGGTTTACTTCATGATGATTCGCCGGAGATCGAATTGTCTAATTACGGAAGGATCCCAAGTCCAGGAAGTGAGAGCCCTTCAGATTTCCTCAATGGAGAAAGTGTATATGTAGAACCAATTGCTGATTTGGATCTCTTCTTTGAAAGACTTTATGGTTACTACTGTGAGAAAGGGTTATGGTGTATTGTTACAAAGTGGATTGTTGAACTTCTAAGTCTGGGGTTCACCATATGCTTTTCAGGATTTTTTTTACTATATGTTGATTGGAATGGGCTCCGTAATGCAAAATGTGGGATGGATGCTGTTGAATCTGGAATTAAGCCCTGTGATCTTGGCAAAGAAGCTCTTAATCAACACCCTTTAACCCCACTCACACTTACCAAAGCTATTATTGTTGGATACTTGGGGATTTTTTCCTTCTATTGGATGTTTTGTTTCCTGCGATTCTTTGCTCAACTAAAGGATATTCTCGAAATCCGCCAGTTTTTCTACAGCAGTCTTCATGTCACTGACAATGAAATTCAAACTATGCCCTGGGCCAAAATTGTTGACAAAGTTGTTCTCGTTCAAAATACTCGGAAACTATGTGTGCTGAAGGATCTTTCTGCCCATGATATAGTCATGAGACTGATGCGGAAGGAGAACTACTTAATTGGAATGCTCAACAAGGGTGTGCTTGCTTTCCCCATTTCACAATGGTTTCCAGGTGCTGGCCCGAAAGTTCAATCTAGTCCTGATGGAGCACAATATCGTTTAGTACTTACCAAGACCCTTGAATGGACTTTAAATTGGTGCATCCTACATAGCATGTTTGATTGGAACTTTTGTGTCAGAAGGGATTTTGTGTCAAATCCAAAGACATTACAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTCCTTGTCATATTCATGCTGGCATATCTCTTTCTGAGGCATGCTGAGCAATTTTATAATCACCCAAGCACAGCATCATCTCGAAGATGGTCAAACTTGTCTAGGTGGATTTTTAGGGAATACAATGAGGTCGACCATCTCTTCAGGCATCGGATTAATAACAGTGTATCACATGCTTCTGATTATCTCAAGCAGTTTCCTACACCTATCATATCTATCATTGCAAAATTCATATCTTTTGTATCCGGTGGCTTTGCTGCAATTCTGATCATTATTGCTTTTCTCGAGGAGTCTCTGCTAGAGGGCCATATATTTGGTCGGAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCTATTAGCCGGGCTGCAATTGCAGATGAGCTTCTGGTCTTAGATCCCGAGGGAACAATATCTATGGTGGTTCAGCATACACATTATATGCCAAAGAGATGGCGTGGCAAAGAAATTACTGACGTGGTCCGCATTGAATTTGAAACCTTATTCCAGTATACAGCAATGATGTTACTTGAGGAGATGGCTTCAATTTTCCTCACTCCATATTTACTTCTGTTTATTGTCCCAAAGCGAGTTGATGATATCTTGCAGTACATTGCCGATTTCACTGTAAATGTTGAAGGTGTTGGGCATGTTTGCAGTTTTAGCACCTTTGATTTTCAAGAGCATGGAAACTCTCATTATGGTTCCCCATATAATGCCTCTCGTAGCAGAAGGAGTTCACAGGGAAAGATGGAGAAATCATTGTTGAGCTTTCAGAGTAGTTATCCATCATGGGAACCAAATACTCAGGGGAAGCAGTTTTTGCTAAATCTTAGAACATTCAGAGAGCGGAAGTTATCAGTACATGGAAACATACACACATCTTCCCCTCCTAGAATGTGGAGGGGTAGTCCCAATACGGCAGGGGATGAAGACAGAAACAGGTTTATATCCAGGGAAATGCCATACAGCACTTTTGCAACTGGCAATCACTTGGATTCGTTGTGGTTGATTGAAGCCAACCAGAATAATCACCCCTATCTTCTTGATTGGTACTACACAGCTCGACCTCATGATGCAGCTTCAAGAGATGTTCCATTAGAACCATATGGAATAACAGAACGTTATTCCAGAGACTATTCGATGCCTTCCAACTTGACACAGAATGAACCCAACTATGAAGAATACTCAAATGAGTATCACGAGGATCGGGCTGCATCTCAACTTGGGGCTTCCTCATCAGCTCCCATCCTTAGGGAGAGCTTTAGTCAGGAGCAAAACTATAATGAACTTCCCCACACAACCCGAAGCCATTGGTGGGCTAGAAGTCGTCTACGGAGTGGACAAGCTCAGGCAAGCTTTTACGAGCCTCCAGATTTCAATGACCAAACAACATATAATTATCATGACAAGTTTTCTGATAGAGGGTCAGAGGATCAAGACCAAGAACAACACTTTTACTGGAGAGATCATCACAACAAATTATCTAAAACAACAATGACAGATGACTTAGAGGCAGGAGAATTTAATCTACATTTTGGTGATATTTATAGCAGACCTCCAGAAACTCCCACTATAAATTCCAGCACTGCTAGCTTTTGA
Protein sequence

>Msa1122890

MFSRPSGSGAFSIFKWKQKGASSLTRGLLHDDSPEIELSNYGRIPSPGSESPSDFLNGESVYVEPIADLDLFFERLYGYYCEKGLWCIVTKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLGKEALNQHPLTPLTLTKAIIVGYLGIFSFYWMFCFLRFFAQLKDILEIRQFFYSSLHVTDNEIQTMPWAKIVDKVVLVQNTRKLCVLKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPKVQSSPDGAQYRLVLTKTLEWTLNWCILHSMFDWNFCVRRDFVSNPKTLQKRLMVVGLAMLLLSPFLVIFMLAYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREYNEVDHLFRHRINNSVSHASDYLKQFPTPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAIADELLVLDPEGTISMVVQHTHYMPKRWRGKEITDVVRIEFETLFQYTAMMLLEEMASIFLTPYLLLFIVPKRVDDILQYIADFTVNVEGVGHVCSFSTFDFQEHGNSHYGSPYNASRSRRSSQGKMEKSLLSFQSSYPSWEPNTQGKQFLLNLRTFRERKLSVHGNIHTSSPPRMWRGSPNTAGDEDRNRFISREMPYSTFATGNHLDSLWLIEANQNNHPYLLDWYYTARPHDAASRDVPLEPYGITERYSRDYSMPSNLTQNEPNYEEYSNEYHEDRAASQLGASSSAPILRESFSQEQNYNELPHTTRSHWWARSRLRSGQAQASFYEPPDFNDQTTYNYHDKFSDRGSEDQDQEQHFYWRDHHNKLSKTTMTDDLEAGEFNLHFGDIYSRPPETPTINSSTASF*