AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1078490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1078490 MtrunA17_Chr7g0263401 96.544 868 29 1 1 868 1 867 0.0 1711
Msa1078490 MtrunA17_Chr1g0181991 61.257 955 253 21 1 868 1 925 0.0 1063
Msa1078490 MtrunA17_Chr3g0133821 66.561 314 87 3 559 863 523 827 2.84e-139 434
Msa1078490 MtrunA17_Chr3g0133821 70.526 95 28 0 1 95 1 95 9.52e-40 158
Msa1078490 MtrunA17_Chr1g0153651 74.219 256 64 2 609 863 261 515 2.32e-132 405
Msa1078490 MtrunA17_Chr1g0153651 58.242 91 35 2 1 88 1 91 6.29e-26 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1078490 AT3G09560.3 53.433 932 342 21 1 868 1 904 0.0 894
Msa1078490 AT3G09560.1 53.433 932 342 21 1 868 1 904 0.0 894
Msa1078490 AT3G09560.2 53.433 932 342 21 1 868 1 904 0.0 894
Msa1078490 AT3G09560.4 53.433 932 342 21 1 868 1 904 0.0 894
Msa1078490 AT5G42870.1 58.596 413 141 7 461 867 541 929 8.68e-161 493
Msa1078490 AT5G42870.1 60.215 93 37 0 1 93 1 93 1.96e-33 139
Msa1078490 AT5G42870.2 57.627 413 140 8 461 867 541 924 3.52e-155 479
Msa1078490 AT5G42870.2 60.215 93 37 0 1 93 1 93 1.74e-33 139
Msa1078490 AT5G42870.3 57.967 364 123 7 461 818 541 880 4.99e-134 422
Msa1078490 AT5G42870.3 60.215 93 37 0 1 93 1 93 1.60e-33 139

Find 247 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGAAAAGTTCCAGAATTT+TGG 0.130476 7_2:-77447706 None:intergenic
TAGCATTTCCGTTAACATTT+TGG 0.146903 7_2:-77452880 None:intergenic
GTTCTATCATAAAACATATT+TGG 0.187069 7_2:-77452768 None:intergenic
TGCTTTCAGATCTGATGTTT+TGG 0.192008 7_2:+77450664 Msa1078490:intron
ACTTCAACTCTTGGAATTAT+TGG 0.208357 7_2:+77452641 Msa1078490:CDS
TTAGGGGTTGGAATGGAATT+TGG 0.209118 7_2:-77447248 None:intergenic
TTGATGCTCATATATATTTA+TGG 0.222189 7_2:+77449920 Msa1078490:CDS
ATTAAACAATTTAGAAATAT+TGG 0.228590 7_2:+77448847 Msa1078490:CDS
ATGAATGTGGTGGGAAAATT+TGG 0.229388 7_2:+77447758 Msa1078490:CDS
TTTGTTTAAATACCTGTTTC+AGG 0.232511 7_2:-77451746 None:intergenic
CATATGTATCTTGATAATTC+CGG 0.248335 7_2:+77447983 Msa1078490:CDS
TACACGGATTCTTTGGTATT+AGG 0.256009 7_2:+77452718 Msa1078490:three_prime_UTR
TCGGCTGATTTGTCAGAATA+TGG 0.264818 7_2:+77448283 Msa1078490:CDS
CCCTGATGAGGTTGAAATTC+TGG 0.275882 7_2:+77447168 None:intergenic
GAACTTAGTTACAGTAAAAT+AGG 0.277495 7_2:+77452289 Msa1078490:CDS
AGTTTCTCTACGAGGGTTCT+AGG 0.286566 7_2:+77449789 Msa1078490:CDS
TTGTTGTGGGCTTACAAGTT+AGG 0.289505 7_2:-77447266 None:intergenic
TTGTTGTAATTGTTTGGTAT+TGG 0.311081 7_2:+77452849 Msa1078490:three_prime_UTR
AGTCCTTACTCAAACCAAAA+TGG 0.312761 7_2:-77449119 None:intergenic
TCTCAAAGATGGTCAAAATA+TGG 0.321607 7_2:+77449758 Msa1078490:CDS
CAACTAAATAGATACCTTAA+TGG 0.323620 7_2:-77450750 None:intergenic
TTGTGAAGATAAATGTTAAT+GGG 0.325693 7_2:+77447945 Msa1078490:CDS
CTTTCTTGCAGTGCTTTGAA+TGG 0.327500 7_2:-77447317 None:intergenic
AGTGTTGAAATTGATATTAC+TGG 0.332390 7_2:+77448109 Msa1078490:CDS
AAGGCCGCCCCTCTTGTTCT+TGG 0.341180 7_2:+77449411 Msa1078490:CDS
TGCCTTTAGTTGGAAAAGAT+TGG 0.344724 7_2:+77450696 Msa1078490:CDS
TGTTGTAATTGTTTGGTATT+GGG 0.346409 7_2:+77452850 Msa1078490:three_prime_UTR
AACCCATTCTATGCGGGGTT+TGG 0.347079 7_2:+77452250 Msa1078490:CDS
CTTGCTCAGCAGGATGATTA+TGG 0.349602 7_2:+77448727 Msa1078490:CDS
GATTCCGAATCTGATTTGTT+TGG 0.352962 7_2:+77449636 Msa1078490:CDS
GATCATAGCGTATCTGATTC+GGG 0.353087 7_2:+77448142 Msa1078490:CDS
GAGGTTGAAATTCTGGTATT+AGG 0.354716 7_2:+77447175 None:intergenic
TGTTGTGGGCTTACAAGTTA+GGG 0.358566 7_2:-77447265 None:intergenic
GATATCGGTAATAGTGCTTC+CGG 0.358681 7_2:+77448577 Msa1078490:CDS
GAAATAACAACAGGTCCTTT+TGG 0.363480 7_2:-77451915 None:intergenic
TTAAAAGTTCCTGACCTTCT+CGG 0.364505 7_2:-77451965 None:intergenic
AAATTCAGATAATCGATTCT+TGG 0.365245 7_2:+77447617 Msa1078490:five_prime_UTR
ATATGTATCTTGATAATTCC+GGG 0.366297 7_2:+77447984 Msa1078490:CDS
ATTTATCTTCACAATCTTCT+CGG 0.372459 7_2:-77447936 None:intergenic
GGCAATGAGGAGTTTAGTTC+TGG 0.375234 7_2:+77448475 Msa1078490:CDS
CTGAATTTCTTGATTAGTTA+CGG 0.377236 7_2:-77447602 None:intergenic
ATTGTGAAGATAAATGTTAA+TGG 0.378629 7_2:+77447944 Msa1078490:CDS
TGGTTGTTGTTGTAATTGTT+TGG 0.380204 7_2:+77452843 Msa1078490:three_prime_UTR
TGATCATAGCGTATCTGATT+CGG 0.384025 7_2:+77448141 Msa1078490:CDS
TGATGCTATCATCTCATTAG+AGG 0.387912 7_2:-77449730 None:intergenic
GTGGAAGTTGACACTGGTTC+TGG 0.389318 7_2:+77448964 Msa1078490:CDS
CCCACAGGAATTGTATCTTC+AGG 0.392472 7_2:-77449468 None:intergenic
ACATAGAACTAATCAATATC+TGG 0.393486 7_2:-77452676 None:intergenic
ATTTGTCACACGGAGGAAAC+TGG 0.394153 7_2:+77448637 Msa1078490:CDS
GATATCAGAGCTATAAATAC+TGG 0.396300 7_2:-77448560 None:intergenic
GAATTTGATATCTCACTTTG+TGG 0.396349 7_2:+77449234 Msa1078490:intron
GTTGGCTCTAATTCTGAGAT+AGG 0.398990 7_2:-77448382 None:intergenic
GTTTCCTCCGTGTGACAAAT+AGG 0.403271 7_2:-77448634 None:intergenic
GAGTTAGTAACACCTTCAAC+AGG 0.404417 7_2:-77448064 None:intergenic
GTAAGGTTTGGTAAATTTCA+AGG 0.404862 7_2:+77447899 Msa1078490:CDS
TTCTAATCCGGAGGTGATCT+TGG 0.405144 7_2:+77448330 Msa1078490:CDS
AATTCAGATAATCGATTCTT+GGG 0.407555 7_2:+77447618 Msa1078490:five_prime_UTR
TCCTACGTCTTTGCTTGAAC+AGG 0.407811 7_2:+77452524 Msa1078490:CDS
ACTTTGTGGTCACGAACTTA+AGG 0.409783 7_2:+77449248 Msa1078490:CDS
CACCACCAAAAGGGTGAAAA+GGG 0.410706 7_2:-77447817 None:intergenic
TTGCCAAACCCCGCATAGAA+TGG 0.414444 7_2:-77452253 None:intergenic
CTATTAATTAAAAGTTTCTT+CGG 0.414606 7_2:+77447669 Msa1078490:five_prime_UTR
ATATCGGTAATAGTGCTTCC+GGG 0.417611 7_2:+77448578 Msa1078490:CDS
ATTTGGAACCTTGATAACTA+AGG 0.420387 7_2:+77447775 Msa1078490:CDS
AGAGAATGTTGTGGACTTGC+AGG 0.425386 7_2:+77448306 Msa1078490:CDS
TCACGAACTTAAGGCGGGTA+TGG 0.425429 7_2:+77449257 Msa1078490:CDS
AGCTGCATCATGCATGAATT+CGG 0.430128 7_2:+77448669 Msa1078490:CDS
GAGTGCCCGTGCTATTGTCC+AGG 0.431287 7_2:+77451695 Msa1078490:CDS
CTTAAATGAACTTGCTCAGC+AGG 0.432746 7_2:+77448717 Msa1078490:CDS
GGCAGGAGGACTTCAACTCT+TGG 0.432981 7_2:+77452632 Msa1078490:intron
CTCATATATATTTATGGAAG+TGG 0.433128 7_2:+77449926 Msa1078490:CDS
GCACCACCAAAAGGGTGAAA+AGG 0.435072 7_2:-77447818 None:intergenic
CCTCAATTTCACTTGGGACC+AGG 0.436900 7_2:+77448430 Msa1078490:CDS
CGAAGGTTGCCAAATAGAAA+AGG 0.437602 7_2:+77448609 Msa1078490:CDS
ATTGTATCTTCAGGGGCAAC+AGG 0.437634 7_2:-77449459 None:intergenic
GGGCAGTTCATGCCTTTAGT+TGG 0.438033 7_2:+77450686 Msa1078490:CDS
CTCCTCGCAAGCAATTTGTT+AGG 0.441589 7_2:+77449697 Msa1078490:CDS
GTGATCTTGGTTAGCGTTGA+CGG 0.444536 7_2:+77448343 Msa1078490:CDS
TTCCTGACCTTCTCGGTAAA+GGG 0.446468 7_2:-77451958 None:intergenic
ACAAGATGAAAGGTCCTCAT+TGG 0.448766 7_2:+77448756 Msa1078490:CDS
CCTGTTGTTATTTCACCTGA+TGG 0.449780 7_2:+77451924 Msa1078490:CDS
GTTCCTGACCTTCTCGGTAA+AGG 0.453457 7_2:-77451959 None:intergenic
TGCTATATGTTCGAACTACT+TGG 0.453590 7_2:+77452898 Msa1078490:three_prime_UTR
GGAGCACGCCTTGGTATGTA+AGG 0.453862 7_2:+77447882 Msa1078490:CDS
TCAGCCGAATCTTCAATTGT+TGG 0.454790 7_2:-77448268 None:intergenic
ATAAACACCCTTAGTTATCA+AGG 0.455833 7_2:-77447783 None:intergenic
GACTCAAATGTCCCTGTTGA+AGG 0.461533 7_2:+77448052 Msa1078490:CDS
AGTATTTATAGCTCTGATAT+CGG 0.466723 7_2:+77448562 Msa1078490:CDS
GGAAAAGATTGGAACCAGAC+TGG 0.467033 7_2:+77450707 Msa1078490:CDS
ACTGGTTCTGGCATTCGTTC+CGG 0.467940 7_2:+77448976 Msa1078490:CDS
ACGCCTTGGTATGTAAGGTT+TGG 0.469262 7_2:+77447887 Msa1078490:CDS
GTGTTGCTGATTATGTTAGT+AGG 0.469363 7_2:+77448509 Msa1078490:CDS
TCAACCAACAATTGAAGATT+CGG 0.477254 7_2:+77448264 Msa1078490:CDS
GGACTTGCAGGGTTCTAATC+CGG 0.477849 7_2:+77448318 Msa1078490:CDS
AAGTCCAGCGATGATAATCC+TGG 0.480068 7_2:+77449507 Msa1078490:CDS
CAACCCCACTTAGTGGGATA+AGG 0.480548 7_2:+77452818 Msa1078490:three_prime_UTR
TTGGCTCTAATTCTGAGATA+GGG 0.481968 7_2:-77448381 None:intergenic
CCACAGGAATTGTATCTTCA+GGG 0.482375 7_2:-77449467 None:intergenic
CTATTTGGCAACCTTCGAGC+TGG 0.483317 7_2:-77448603 None:intergenic
ACATCAACAGCACCACCAAA+AGG 0.484992 7_2:-77447827 None:intergenic
CACGAACTTAAGGCGGGTAT+GGG 0.485013 7_2:+77449258 Msa1078490:CDS
GCAACCTTCGAGCTGGACCC+CGG 0.485525 7_2:-77448596 None:intergenic
TGGGCTTACAAGTTAGGGGT+TGG 0.486544 7_2:-77447260 None:intergenic
ACATCAGCTGTTGAAGCATC+CGG 0.487451 7_2:-77448532 None:intergenic
GATTATAACCCATTCTATGC+GGG 0.488504 7_2:+77452244 Msa1078490:CDS
GAAAAGATTGGAACCAGACT+GGG 0.489336 7_2:+77450708 Msa1078490:CDS
AGAGCCAAACAAATCAGATT+CGG 0.494261 7_2:-77449640 None:intergenic
CGTCCAGACGAAGATGGTCC+AGG 0.496672 7_2:-77449525 None:intergenic
TTCCTGTGGGTCAAGATGAT+AGG 0.496718 7_2:+77449481 Msa1078490:CDS
CCACTTAGTGGGATAAGGCT+TGG 0.499202 7_2:+77452823 Msa1078490:three_prime_UTR
CGCCCCTCTTGTTCTTGGAG+TGG 0.499616 7_2:+77449416 Msa1078490:CDS
AATATTTATCATTAACCCTA+AGG 0.500228 7_2:+77452327 Msa1078490:CDS
AATCCTGGACCATCTTCGTC+TGG 0.500733 7_2:+77449522 Msa1078490:CDS
GCGGCTGTCCAAAATGTTAA+CGG 0.501411 7_2:+77452872 Msa1078490:three_prime_UTR
GAGTTATCTACCATGGGAAA+AGG 0.503668 7_2:+77449392 Msa1078490:CDS
TGCCAAACCCCGCATAGAAT+GGG 0.504754 7_2:-77452252 None:intergenic
ATTTAAAATCAGAATTTCAA+GGG 0.506367 7_2:+77448923 Msa1078490:CDS
ATGTAGCCAACCCCACTTAG+TGG 0.507195 7_2:+77452811 Msa1078490:three_prime_UTR
AGTTCCTGGTTATATAAGCC+TGG 0.510579 7_2:-77451713 None:intergenic
GAGGGTTCTAGGAACACAAC+AGG 0.510904 7_2:+77449800 Msa1078490:CDS
CCATCAGGTGAAATAACAAC+AGG 0.512658 7_2:-77451924 None:intergenic
CCTGGTCCCAAGTGAAATTG+AGG 0.512878 7_2:-77448430 None:intergenic
AATTTAAAATCAGAATTTCA+AGG 0.515613 7_2:+77448922 Msa1078490:CDS
AAAGCCTTGCCACCCCAGTC+TGG 0.517161 7_2:-77450721 None:intergenic
ATTGTTGTTCAGCAACAAGA+TGG 0.518652 7_2:+77447851 Msa1078490:CDS
AGGGACGGAAATAATCCATC+AGG 0.519561 7_2:-77451939 None:intergenic
TAGAATGGGTTATAATCAGA+AGG 0.527886 7_2:-77452238 None:intergenic
GTTGAGCCATCTCCAACCTC+AGG 0.531698 7_2:+77449663 Msa1078490:CDS
ACAAATTCCTCAATTTCACT+TGG 0.532985 7_2:+77448423 Msa1078490:CDS
TGAAGAAGTAGCACCACTGA+TGG 0.536057 7_2:-77448881 None:intergenic
CTTATCCCACTAAGTGGGGT+TGG 0.538908 7_2:-77452817 None:intergenic
ATTGTAATTTCAGATGTGGA+TGG 0.540092 7_2:+77449958 Msa1078490:CDS
TTTCACTTGGGACCAGGTGA+AGG 0.540389 7_2:+77448436 Msa1078490:CDS
TTTGGAACCTTGATAACTAA+GGG 0.543072 7_2:+77447776 Msa1078490:CDS
GACTCAAGCCTACCTGAGGT+TGG 0.546268 7_2:-77449675 None:intergenic
CCCTCTTGTTCTTGGAGTGG+CGG 0.548536 7_2:+77449419 Msa1078490:CDS
CTGGACGTAGGTGGAGACTC+TGG 0.548685 7_2:+77449541 Msa1078490:CDS
AAGACAGCTGAGCACAATAG+TGG 0.548705 7_2:+77449585 Msa1078490:CDS
AGCCTACCTGAGGTTGGAGA+TGG 0.549317 7_2:-77449669 None:intergenic
TTTCCGTCCCTTTACCGAGA+AGG 0.550428 7_2:+77451951 Msa1078490:CDS
ATGGCAATTTACAAGATGAA+AGG 0.551334 7_2:+77448746 Msa1078490:CDS
TGGTCCAGGATTATCATCGC+TGG 0.553435 7_2:-77449511 None:intergenic
CAAATTCCTCAATTTCACTT+GGG 0.554755 7_2:+77448424 Msa1078490:CDS
CCAAGCCTTATCCCACTAAG+TGG 0.555227 7_2:-77452823 None:intergenic
CATCAACAGCACCACCAAAA+GGG 0.556201 7_2:-77447826 None:intergenic
TTTGCCAGAACTTCAAAAGG+TGG 0.556741 7_2:+77448201 Msa1078490:CDS
AACCTATCATCTTGACCCAC+AGG 0.558319 7_2:-77449483 None:intergenic
GAAGGTTGCCAAATAGAAAA+GGG 0.559450 7_2:+77448610 Msa1078490:CDS
GTTGTGGGCTTACAAGTTAG+GGG 0.560528 7_2:-77447264 None:intergenic
TGCTGATTATGTTAGTAGGC+CGG 0.561183 7_2:+77448513 Msa1078490:CDS
CCATTCCACATCATTCGTAC+CGG 0.561582 7_2:-77448995 None:intergenic
CCCTGAAGATACAATTCCTG+TGG 0.563260 7_2:+77449467 Msa1078490:CDS
AACATTCAGTTTCTCTACGA+GGG 0.564099 7_2:+77449782 Msa1078490:CDS
CAAGCCTTATCCCACTAAGT+GGG 0.565284 7_2:-77452822 None:intergenic
GGAACCAGACTGGGGTGGCA+AGG 0.569774 7_2:+77450717 Msa1078490:CDS
TTACAAGTTAGGGGTTGGAA+TGG 0.571871 7_2:-77447255 None:intergenic
GCATCATTGAATCTCAAAGA+TGG 0.573195 7_2:+77449747 Msa1078490:CDS
GTCCTAACAAATTGCTTGCG+AGG 0.573977 7_2:-77449699 None:intergenic
ACTAATAATTTCAAGTACAG+TGG 0.575677 7_2:-77449040 None:intergenic
TTCACTTGGGACCAGGTGAA+GGG 0.578350 7_2:+77448437 Msa1078490:CDS
ATAAAATGTCCGACCAACAT+CGG 0.579316 7_2:-77448227 None:intergenic
ACGCTAACCAAGATCACCTC+CGG 0.579858 7_2:-77448337 None:intergenic
GATGCTATCATCTCATTAGA+GGG 0.581965 7_2:-77449729 None:intergenic
TCATTGGAAGTTGCTGTCTG+AGG 0.582855 7_2:-77449084 None:intergenic
CAAAAGGTGGAATCCGATGT+TGG 0.583418 7_2:+77448214 Msa1078490:CDS
TCTGAGTTTACTTCTGAAGA+CGG 0.583454 7_2:+77448085 Msa1078490:CDS
CAGAGAGAGTTATCTACCAT+GGG 0.583701 7_2:+77449386 Msa1078490:CDS
AAATTTCAAGGTGTTCTCAA+AGG 0.584146 7_2:+77447911 Msa1078490:CDS
TAGAAATCAGTCCCTTCACC+TGG 0.588186 7_2:-77448448 None:intergenic
AAGAATTGTAATTTCAGATG+TGG 0.588816 7_2:+77449954 Msa1078490:CDS
CCGGTACGAATGATGTGGAA+TGG 0.589277 7_2:+77448995 Msa1078490:CDS
TGTTCAAGCAAAGACGTAGG+AGG 0.592284 7_2:-77452522 None:intergenic
TGGCTCTAATTCTGAGATAG+GGG 0.597023 7_2:-77448380 None:intergenic
TCAGAGAGAGTTATCTACCA+TGG 0.597194 7_2:+77449385 Msa1078490:CDS
CCGCCACTCCAAGAACAAGA+GGG 0.598140 7_2:-77449419 None:intergenic
CAGACAGCAACTTCCAATGA+GGG 0.598692 7_2:+77449087 Msa1078490:CDS
TGTACTTGAAATTATTAGTG+AGG 0.600231 7_2:+77449044 Msa1078490:CDS
TATAAGCCTGGACAATAGCA+CGG 0.602894 7_2:-77451701 None:intergenic
CACCTACGTCCAGACGAAGA+TGG 0.604562 7_2:-77449531 None:intergenic
GCCGCCACTCCAAGAACAAG+AGG 0.605405 7_2:-77449420 None:intergenic
AGTAAGTCACTTTACAAGCA+AGG 0.605483 7_2:-77452933 None:intergenic
GAAGAAGTAGCACCACTGAT+GGG 0.605725 7_2:-77448880 None:intergenic
TTTAAAATCAGAATTTCAAG+GGG 0.607929 7_2:+77448924 Msa1078490:CDS
GAGAATGTTGTGGACTTGCA+GGG 0.608699 7_2:+77448307 Msa1078490:CDS
AGTAAAATAGGAATTCCAAA+GGG 0.609251 7_2:+77452301 Msa1078490:CDS
TGTGGTCACGAACTTAAGGC+GGG 0.610181 7_2:+77449252 Msa1078490:CDS
CAGTAAAATAGGAATTCCAA+AGG 0.610652 7_2:+77452300 Msa1078490:CDS
TGTAGCCAACCCCACTTAGT+GGG 0.611984 7_2:+77452812 Msa1078490:three_prime_UTR
ATTATAACCCATTCTATGCG+GGG 0.612931 7_2:+77452245 Msa1078490:CDS
GTTCAAGATTGCTTGTCTAG+AGG 0.613173 7_2:+77452089 Msa1078490:CDS
TTACCAAACCTTACATACCA+AGG 0.615393 7_2:-77447890 None:intergenic
AGGTGGAATCCGATGTTGGT+CGG 0.615446 7_2:+77448218 Msa1078490:CDS
TTGTGGTCACGAACTTAAGG+CGG 0.615928 7_2:+77449251 Msa1078490:CDS
ATAAGCCTGGACAATAGCAC+GGG 0.616334 7_2:-77451700 None:intergenic
TCAGAGCTATAAATACTGGA+TGG 0.617656 7_2:-77448556 None:intergenic
CACTCCAAGAACAAGAGGGG+CGG 0.618301 7_2:-77449415 None:intergenic
TGTGAAGATAAATGTTAATG+GGG 0.619954 7_2:+77447946 Msa1078490:CDS
TCGTTCCGGTACGAATGATG+TGG 0.621957 7_2:+77448990 Msa1078490:CDS
AACTAATCAATATCTGGCAT+AGG 0.627013 7_2:-77452670 None:intergenic
CAAGCAATCTTGAACTCATG+AGG 0.627073 7_2:-77452081 None:intergenic
CGCCACTCCAAGAACAAGAG+GGG 0.627600 7_2:-77449418 None:intergenic
CATCTTCGTCTGGACGTAGG+TGG 0.627651 7_2:+77449532 Msa1078490:CDS
AAAGAAAGAATGAATGTGGT+GGG 0.628462 7_2:+77447749 Msa1078490:exon
GCATCAGTGGAAGTTGACAC+TGG 0.631154 7_2:+77448958 Msa1078490:CDS
TGACCTTCTCGGTAAAGGGA+CGG 0.631465 7_2:-77451954 None:intergenic
TCAGACAGCAACTTCCAATG+AGG 0.632178 7_2:+77449086 Msa1078490:CDS
TTGTCCAGGCTTATATAACC+AGG 0.632877 7_2:+77451709 Msa1078490:CDS
ATCATAGCGTATCTGATTCG+GGG 0.633177 7_2:+77448143 Msa1078490:CDS
GACAGCAACTTCCAATGAGG+GGG 0.633635 7_2:+77449089 Msa1078490:CDS
TATCGGTAATAGTGCTTCCG+GGG 0.633679 7_2:+77448579 Msa1078490:CDS
TATGTATCTTGATAATTCCG+GGG 0.634354 7_2:+77447985 Msa1078490:CDS
GAAAGAAAGAATGAATGTGG+TGG 0.636069 7_2:+77447748 Msa1078490:exon
GGTGAGTTATCTCCCATCAG+TGG 0.640463 7_2:+77448868 Msa1078490:CDS
AGAATGGGTTATAATCAGAA+GGG 0.641875 7_2:-77452237 None:intergenic
GAAGGGACTGATTTCTACGA+AGG 0.643261 7_2:+77448454 Msa1078490:CDS
GGTTGATAAAGATGCATCAG+TGG 0.645734 7_2:+77448945 Msa1078490:CDS
ACAGATTGAGAAAACGAATG+AGG 0.646242 7_2:-77447379 None:intergenic
GTTCAAGCAAAGACGTAGGA+GGG 0.648088 7_2:-77452521 None:intergenic
TGATTATAACCCATTCTATG+CGG 0.650443 7_2:+77452243 Msa1078490:CDS
CCTGAAGATACAATTCCTGT+GGG 0.650890 7_2:+77449468 Msa1078490:CDS
CACAGGAATTGTATCTTCAG+GGG 0.660656 7_2:-77449466 None:intergenic
ACTGAAAGAAAGAATGAATG+TGG 0.662863 7_2:+77447745 Msa1078490:exon
TGAACACTAATAGGGTGAGG+TGG 0.663341 7_2:+77452434 Msa1078490:intron
CTTGCAGGGTTCTAATCCGG+AGG 0.664062 7_2:+77448321 Msa1078490:CDS
AGACAGCAACTTCCAATGAG+GGG 0.667001 7_2:+77449088 Msa1078490:CDS
TCATAGCGTATCTGATTCGG+GGG 0.670402 7_2:+77448144 Msa1078490:CDS
AAGCCTTATCCCACTAAGTG+GGG 0.671687 7_2:-77452821 None:intergenic
ACCACCAAAAGGGTGAAAAG+GGG 0.671766 7_2:-77447816 None:intergenic
AGCACATCGAATATCTGCTG+AGG 0.674065 7_2:+77449308 Msa1078490:CDS
GGTGAATCAAAACTCAGCGG+AGG 0.674797 7_2:+77448777 Msa1078490:CDS
AGTTAGTAACACCTTCAACA+GGG 0.677470 7_2:-77448063 None:intergenic
AGGAGACTCAAGCCTACCTG+AGG 0.678173 7_2:-77449679 None:intergenic
TAGTGGTGATGAATCAAGTG+AGG 0.678368 7_2:+77449602 Msa1078490:CDS
GTATCTTGATAATTCCGGGG+AGG 0.679242 7_2:+77447988 Msa1078490:CDS
AGAATATGGAGAGAATGTTG+TGG 0.680826 7_2:+77448297 Msa1078490:CDS
TGATTTCTACGAAGGCAATG+AGG 0.683113 7_2:+77448462 Msa1078490:CDS
TAACATTCAGTTTCTCTACG+AGG 0.686208 7_2:+77449781 Msa1078490:CDS
GACCATCTTCGTCTGGACGT+AGG 0.688284 7_2:+77449529 Msa1078490:CDS
CTCAGAATTAGAGCCAACTG+AGG 0.700989 7_2:+77448387 Msa1078490:CDS
AAAGGGACCTATTTGTCACA+CGG 0.702150 7_2:+77448627 Msa1078490:CDS
AGCCATCTCCAACCTCAGGT+AGG 0.703115 7_2:+77449667 Msa1078490:CDS
TGTAATTGTTTGGTATTGGG+CGG 0.703952 7_2:+77452853 Msa1078490:three_prime_UTR
AGATTGGAACCAGACTGGGG+TGG 0.726345 7_2:+77450712 Msa1078490:CDS
AAAAGATTGGAACCAGACTG+GGG 0.727153 7_2:+77450709 Msa1078490:CDS
ACCTGTTCAAGCAAAGACGT+AGG 0.741164 7_2:-77452525 None:intergenic
ATTGGTGAATCAAAACTCAG+CGG 0.751587 7_2:+77448774 Msa1078490:CDS
GGGACCTATTTGTCACACGG+AGG 0.770332 7_2:+77448630 Msa1078490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAACAATTTAGAAATAT+TGG + chr7_2:77448847-77448866 Msa1078490:CDS 10.0%
!!! ATATTTGTTTTTTTCTTAAA+AGG + chr7_2:77450501-77450520 Msa1078490:intron 10.0%
!! CTATTAATTAAAAGTTTCTT+CGG + chr7_2:77447669-77447688 Msa1078490:five_prime_UTR 15.0%
!!! AATTTAAAATCAGAATTTCA+AGG + chr7_2:77448922-77448941 Msa1078490:CDS 15.0%
!!! ATTTAAAATCAGAATTTCAA+GGG + chr7_2:77448923-77448942 Msa1078490:CDS 15.0%
!! AAGAAAATCAAATAAACAAT+TGG - chr7_2:77449201-77449220 None:intergenic 15.0%
!!! TTTTTATTCTTAGTTATAGA+TGG - chr7_2:77449351-77449370 None:intergenic 15.0%
!!! GATTCATTTTATAAAATAAG+GGG - chr7_2:77450116-77450135 None:intergenic 15.0%
!!! GGATTCATTTTATAAAATAA+GGG - chr7_2:77450117-77450136 None:intergenic 15.0%
!! TTTACTTCATAAATGAAAAT+AGG + chr7_2:77450187-77450206 Msa1078490:intron 15.0%
!! TTACTTCATAAATGAAAATA+GGG + chr7_2:77450188-77450207 Msa1078490:intron 15.0%
!! ATAAAATTCAATGAAACAAT+AGG - chr7_2:77451606-77451625 None:intergenic 15.0%
!!! ATATTTTAACAATGATAACT+GGG - chr7_2:77451838-77451857 None:intergenic 15.0%
!!! AATATTTTAACAATGATAAC+TGG - chr7_2:77451839-77451858 None:intergenic 15.0%
!!! AATTTTGTCTTATTTACTTA+TGG + chr7_2:77452041-77452060 Msa1078490:intron 15.0%
!!! ATTGAATTGAATTTTGTTGT+GGG - chr7_2:77447282-77447301 None:intergenic 20.0%
!!! AATTGAATTGAATTTTGTTG+TGG - chr7_2:77447283-77447302 None:intergenic 20.0%
!!! TTTTTAAGTTGAATTTGACT+TGG + chr7_2:77447502-77447521 Msa1078490:intron 20.0%
!! ATTGTGAAGATAAATGTTAA+TGG + chr7_2:77447944-77447963 Msa1078490:CDS 20.0%
!! TTGTGAAGATAAATGTTAAT+GGG + chr7_2:77447945-77447964 Msa1078490:CDS 20.0%
!!! TTTAAAATCAGAATTTCAAG+GGG + chr7_2:77448924-77448943 Msa1078490:CDS 20.0%
!!! AATTGGCTTAATCAAATAAT+AGG - chr7_2:77449184-77449203 None:intergenic 20.0%
!! CAAAGTATATATAGTGATAT+GGG - chr7_2:77449852-77449871 None:intergenic 20.0%
!!! TGAACTTTTAATTTCATAAC+AGG + chr7_2:77449897-77449916 Msa1078490:intron 20.0%
!! TTGATGCTCATATATATTTA+TGG + chr7_2:77449920-77449939 Msa1078490:CDS 20.0%
!!! GGGATTCATTTTATAAAATA+AGG - chr7_2:77450118-77450137 None:intergenic 20.0%
!!! TTTGTCTTTTAGTAATCTTA+TGG + chr7_2:77450231-77450250 Msa1078490:intron 20.0%
!!! TCTTTTCAAAATTTAGACAA+TGG - chr7_2:77450354-77450373 None:intergenic 20.0%
!!! TTTTCTTCATTATCTTTTTC+TGG + chr7_2:77450378-77450397 Msa1078490:intron 20.0%
!!! TATGAATATGTGCATTTTTA+AGG - chr7_2:77450629-77450648 None:intergenic 20.0%
!!! CTTAATGGTATTCTTTTTTA+CGG + chr7_2:77451023-77451042 Msa1078490:intron 20.0%
!!! ATGATAAATATTTTTCCCTT+TGG - chr7_2:77452319-77452338 None:intergenic 20.0%
!! AATATTTATCATTAACCCTA+AGG + chr7_2:77452327-77452346 Msa1078490:CDS 20.0%
!! ACTTTCAAAACTAACAAATT+TGG + chr7_2:77452591-77452610 Msa1078490:intron 20.0%
!!! TTTCAGTTACATTTTTTACA+CGG + chr7_2:77452702-77452721 Msa1078490:three_prime_UTR 20.0%
!! GTTCTATCATAAAACATATT+TGG - chr7_2:77452771-77452790 None:intergenic 20.0%
!! AAGATTTAAGTAACGTTTTG+AGG - chr7_2:77447545-77447564 None:intergenic 25.0%
! TTGCAAGAAAAGAAAAGAAA+AGG - chr7_2:77447569-77447588 None:intergenic 25.0%
!! CTGAATTTCTTGATTAGTTA+CGG - chr7_2:77447605-77447624 None:intergenic 25.0%
!! AAATTCAGATAATCGATTCT+TGG + chr7_2:77447617-77447636 Msa1078490:five_prime_UTR 25.0%
!! AATTCAGATAATCGATTCTT+GGG + chr7_2:77447618-77447637 Msa1078490:five_prime_UTR 25.0%
!! TAGAAAAGTTCCAGAATTTT+GGG - chr7_2:77447708-77447727 None:intergenic 25.0%
!! ATAGAAAAGTTCCAGAATTT+TGG - chr7_2:77447709-77447728 None:intergenic 25.0%
! ATTTATCTTCACAATCTTCT+CGG - chr7_2:77447939-77447958 None:intergenic 25.0%
! TGTGAAGATAAATGTTAATG+GGG + chr7_2:77447946-77447965 Msa1078490:CDS 25.0%
!! CATATGTATCTTGATAATTC+CGG + chr7_2:77447983-77448002 Msa1078490:CDS 25.0%
!! ATATGTATCTTGATAATTCC+GGG + chr7_2:77447984-77448003 Msa1078490:CDS 25.0%
!! AGTGTTGAAATTGATATTAC+TGG + chr7_2:77448109-77448128 Msa1078490:CDS 25.0%
!!! AGTATTTATAGCTCTGATAT+CGG + chr7_2:77448562-77448581 Msa1078490:CDS 25.0%
!! ACTAATAATTTCAAGTACAG+TGG - chr7_2:77449043-77449062 None:intergenic 25.0%
! TGTACTTGAAATTATTAGTG+AGG + chr7_2:77449044-77449063 Msa1078490:CDS 25.0%
! CCAAAGTATATATAGTGATA+TGG - chr7_2:77449853-77449872 None:intergenic 25.0%
! CCATATCACTATATATACTT+TGG + chr7_2:77449850-77449869 Msa1078490:intron 25.0%
! CTCATATATATTTATGGAAG+TGG + chr7_2:77449926-77449945 Msa1078490:CDS 25.0%
! AAGAATTGTAATTTCAGATG+TGG + chr7_2:77449954-77449973 Msa1078490:CDS 25.0%
!! ATTTTGTCGAGTTCAAATAA+TGG - chr7_2:77450030-77450049 None:intergenic 25.0%
! TTATAAAATGAATCCCAGTT+TGG + chr7_2:77450122-77450141 Msa1078490:intron 25.0%
! AACAATTACTGAAATTTGCA+TGG - chr7_2:77450153-77450172 None:intergenic 25.0%
! TCATAAATGAAAATAGGGAA+AGG + chr7_2:77450193-77450212 Msa1078490:intron 25.0%
! CAACTAAATAGATACCTTAA+TGG - chr7_2:77450753-77450772 None:intergenic 25.0%
! TTGTCTCAAAACTGAAAATT+TGG - chr7_2:77450967-77450986 None:intergenic 25.0%
! TTAAGTTAACAGAAGTTGTT+TGG - chr7_2:77451008-77451027 None:intergenic 25.0%
! AACAACTTCTGTTAACTTAA+TGG + chr7_2:77451008-77451027 Msa1078490:intron 25.0%
! ATATATACACACACATTAAC+AGG + chr7_2:77451123-77451142 Msa1078490:intron 25.0%
!! GTAAAAGACTAGTTAGATAA+TGG + chr7_2:77451262-77451281 Msa1078490:intron 25.0%
! TAGTTGAATCTAAATTCTAC+AGG - chr7_2:77451507-77451526 None:intergenic 25.0%
! TTAGATTCAACTACATTTAG+TGG + chr7_2:77451514-77451533 Msa1078490:intron 25.0%
!! TTATATAACCAGGAACTTTT+TGG + chr7_2:77451719-77451738 Msa1078490:CDS 25.0%
! TTTGTTTAAATACCTGTTTC+AGG - chr7_2:77451749-77451768 None:intergenic 25.0%
! AACAGGTATTTAAACAAATC+TGG + chr7_2:77451751-77451770 Msa1078490:intron 25.0%
!! AAAATAAGAGTATGCATTAC+AGG - chr7_2:77451780-77451799 None:intergenic 25.0%
! AAAATATTGCATTACCTGAT+AGG + chr7_2:77451851-77451870 Msa1078490:intron 25.0%
! TACCATAACTATATATTTGC+AGG + chr7_2:77451878-77451897 Msa1078490:intron 25.0%
! ATCCTGCAAATATATAGTTA+TGG - chr7_2:77451883-77451902 None:intergenic 25.0%
! ATAACTATATATTTGCAGGA+TGG + chr7_2:77451882-77451901 Msa1078490:intron 25.0%
!! TTTTAATGAGAGAGCAATTA+AGG + chr7_2:77451982-77452001 Msa1078490:intron 25.0%
! GAACTTAGTTACAGTAAAAT+AGG + chr7_2:77452289-77452308 Msa1078490:CDS 25.0%
! AGTAAAATAGGAATTCCAAA+GGG + chr7_2:77452301-77452320 Msa1078490:CDS 25.0%
!!! TGGATTATTGTTATTTCTGA+CGG + chr7_2:77452363-77452382 Msa1078490:intron 25.0%
! ATATGCTTATGAACACTAAT+AGG + chr7_2:77452425-77452444 Msa1078490:intron 25.0%
! TATGCTTATGAACACTAATA+GGG + chr7_2:77452426-77452445 Msa1078490:intron 25.0%
!!! AGAAAGCATTTACAAAACAA+CGG + chr7_2:77452549-77452568 Msa1078490:intron 25.0%
! ACATAGAACTAATCAATATC+TGG - chr7_2:77452679-77452698 None:intergenic 25.0%
! TGGTATTAGGAAAAATTTAG+AGG + chr7_2:77452731-77452750 Msa1078490:three_prime_UTR 25.0%
! TTGTTGTAATTGTTTGGTAT+TGG + chr7_2:77452849-77452868 Msa1078490:three_prime_UTR 25.0%
! TGTTGTAATTGTTTGGTATT+GGG + chr7_2:77452850-77452869 Msa1078490:three_prime_UTR 25.0%
GTAGCAAAAAAAGAAGAAGA+AGG - chr7_2:77447411-77447430 None:intergenic 30.0%
!!! TTTAAGTAACGTTTTGAGGA+TGG - chr7_2:77447541-77447560 None:intergenic 30.0%
! AAAAGTTTCTTCGGTCTTTT+TGG + chr7_2:77447678-77447697 Msa1078490:five_prime_UTR 30.0%
ACTGAAAGAAAGAATGAATG+TGG + chr7_2:77447745-77447764 Msa1078490:exon 30.0%
AAAGAAAGAATGAATGTGGT+GGG + chr7_2:77447749-77447768 Msa1078490:exon 30.0%
! ATTTGGAACCTTGATAACTA+AGG + chr7_2:77447775-77447794 Msa1078490:CDS 30.0%
! TTTGGAACCTTGATAACTAA+GGG + chr7_2:77447776-77447795 Msa1078490:CDS 30.0%
ATAAACACCCTTAGTTATCA+AGG - chr7_2:77447786-77447805 None:intergenic 30.0%
! GTAAGGTTTGGTAAATTTCA+AGG + chr7_2:77447899-77447918 Msa1078490:CDS 30.0%
! AAATTTCAAGGTGTTCTCAA+AGG + chr7_2:77447911-77447930 Msa1078490:CDS 30.0%
! TATGTATCTTGATAATTCCG+GGG + chr7_2:77447985-77448004 Msa1078490:CDS 30.0%
TCAACCAACAATTGAAGATT+CGG + chr7_2:77448264-77448283 Msa1078490:CDS 30.0%
ACAAATTCCTCAATTTCACT+TGG + chr7_2:77448423-77448442 Msa1078490:CDS 30.0%
CAAATTCCTCAATTTCACTT+GGG + chr7_2:77448424-77448443 Msa1078490:CDS 30.0%
GATATCAGAGCTATAAATAC+TGG - chr7_2:77448563-77448582 None:intergenic 30.0%
! AAATAGGTCCCTTTTCTATT+TGG - chr7_2:77448621-77448640 None:intergenic 30.0%
ATGGCAATTTACAAGATGAA+AGG + chr7_2:77448746-77448765 Msa1078490:CDS 30.0%
GAATTTGATATCTCACTTTG+TGG + chr7_2:77449234-77449253 Msa1078490:intron 30.0%
TCTCAAAGATGGTCAAAATA+TGG + chr7_2:77449758-77449777 Msa1078490:CDS 30.0%
TATATAGTGATATGGGAACT+TGG - chr7_2:77449845-77449864 None:intergenic 30.0%
ATCACTATATATACTTTGGC+TGG + chr7_2:77449854-77449873 Msa1078490:intron 30.0%
TCAACCTGAAATAAGCAAAA+TGG - chr7_2:77449880-77449899 None:intergenic 30.0%
ATTGTAATTTCAGATGTGGA+TGG + chr7_2:77449958-77449977 Msa1078490:CDS 30.0%
AATAAGGGGTTAATTGAGTA+CGG - chr7_2:77450102-77450121 None:intergenic 30.0%
CAAACTAACGATGAATGTTT+AGG - chr7_2:77450300-77450319 None:intergenic 30.0%
AATTTAGACAATGGATCACT+AGG - chr7_2:77450345-77450364 None:intergenic 30.0%
!! TATCTTTTTCTGGCCATTTT+TGG + chr7_2:77450388-77450407 Msa1078490:intron 30.0%
CAATCAAAGTAGATACTAGT+TGG - chr7_2:77450424-77450443 None:intergenic 30.0%
GTAATATGTTTGTGCATGTA+AGG - chr7_2:77450593-77450612 None:intergenic 30.0%
!! GAATATGTGCATTTTTAAGG+AGG - chr7_2:77450626-77450645 None:intergenic 30.0%
! TTCCAATCTTTTCCAACTAA+AGG - chr7_2:77450701-77450720 None:intergenic 30.0%
!! CAAACAGTTGATGATGTAAA+TGG + chr7_2:77450819-77450838 Msa1078490:intron 30.0%
AAATGGTAGAAGATATTTCG+AGG + chr7_2:77450836-77450855 Msa1078490:intron 30.0%
AATGGTAGAAGATATTTCGA+GGG + chr7_2:77450837-77450856 Msa1078490:intron 30.0%
! ATTTAAAGCATCTTGTGTCT+TGG + chr7_2:77450867-77450886 Msa1078490:intron 30.0%
TAATGAAATGGTAGCAACAA+AGG - chr7_2:77450909-77450928 None:intergenic 30.0%
GTGACAGAAACATAATGAAA+TGG - chr7_2:77450921-77450940 None:intergenic 30.0%
AAAATTTGGACCCCTAATTT+GGG - chr7_2:77450953-77450972 None:intergenic 30.0%
CTCTTTGCAGCTATATAATA+TGG + chr7_2:77451285-77451304 Msa1078490:intron 30.0%
TAAGTGTCCAAATAGAAACA+GGG - chr7_2:77451435-77451454 None:intergenic 30.0%
TTAAGTGTCCAAATAGAAAC+AGG - chr7_2:77451436-77451455 None:intergenic 30.0%
CACTTAATGCTTGTTTGATT+TGG + chr7_2:77451449-77451468 Msa1078490:intron 30.0%
GAATCTAAATTCTACAGGAA+TGG - chr7_2:77451502-77451521 None:intergenic 30.0%
! TCCTGATTTTGTTAGGAAAA+TGG + chr7_2:77451654-77451673 Msa1078490:intron 30.0%
! TCCATTTTCCTAACAAAATC+AGG - chr7_2:77451658-77451677 None:intergenic 30.0%
TGATATAAGGATTTGTGTCT+AGG - chr7_2:77452121-77452140 None:intergenic 30.0%
AGTTGCACATTAGTGATATA+AGG - chr7_2:77452134-77452153 None:intergenic 30.0%
AACTTGAAAGCTCCATTAAA+AGG + chr7_2:77452150-77452169 Msa1078490:intron 30.0%
TTACTAACACCATTCATGTT+TGG + chr7_2:77452180-77452199 Msa1078490:intron 30.0%
TACTAACACCATTCATGTTT+GGG + chr7_2:77452181-77452200 Msa1078490:intron 30.0%
CATTATTACCCAAACATGAA+TGG - chr7_2:77452192-77452211 None:intergenic 30.0%
! TTTGGGTAATAATGTTTTGC+AGG + chr7_2:77452198-77452217 Msa1078490:intron 30.0%
!! AGAATGGGTTATAATCAGAA+GGG - chr7_2:77452240-77452259 None:intergenic 30.0%
!! TAGAATGGGTTATAATCAGA+AGG - chr7_2:77452241-77452260 None:intergenic 30.0%
TGATTATAACCCATTCTATG+CGG + chr7_2:77452243-77452262 Msa1078490:CDS 30.0%
CAGTAAAATAGGAATTCCAA+AGG + chr7_2:77452300-77452319 Msa1078490:CDS 30.0%
!!! GTATTTTCTTTAGTTCTCAC+AGG + chr7_2:77452389-77452408 Msa1078490:intron 30.0%
!! GAAAGCATTTACAAAACAAC+GGG + chr7_2:77452550-77452569 Msa1078490:intron 30.0%
!! TGGTTTGCAATTTTCATTTG+TGG + chr7_2:77452611-77452630 Msa1078490:intron 30.0%
ACTTCAACTCTTGGAATTAT+TGG + chr7_2:77452641-77452660 Msa1078490:CDS 30.0%
AACTAATCAATATCTGGCAT+AGG - chr7_2:77452673-77452692 None:intergenic 30.0%
!!! CATTTTTTACACGGATTCTT+TGG + chr7_2:77452711-77452730 Msa1078490:three_prime_UTR 30.0%
! TGGTTGTTGTTGTAATTGTT+TGG + chr7_2:77452843-77452862 Msa1078490:three_prime_UTR 30.0%
! TAGCATTTCCGTTAACATTT+TGG - chr7_2:77452883-77452902 None:intergenic 30.0%
ACAGATTGAGAAAACGAATG+AGG - chr7_2:77447382-77447401 None:intergenic 35.0%
!!! TTTTGGTTCTCCCAAAATTC+TGG + chr7_2:77447695-77447714 Msa1078490:five_prime_UTR 35.0%
GAAAGAAAGAATGAATGTGG+TGG + chr7_2:77447748-77447767 Msa1078490:exon 35.0%
! ATGAATGTGGTGGGAAAATT+TGG + chr7_2:77447758-77447777 Msa1078490:CDS 35.0%
! ATTGTTGTTCAGCAACAAGA+TGG + chr7_2:77447851-77447870 Msa1078490:CDS 35.0%
! AGCAACAAGATGGAACTTTT+CGG + chr7_2:77447861-77447880 Msa1078490:CDS 35.0%
TTACCAAACCTTACATACCA+AGG - chr7_2:77447893-77447912 None:intergenic 35.0%
! TTTTACAAAATAAGCCTCCC+CGG - chr7_2:77448005-77448024 None:intergenic 35.0%
!!! GGAGGCTTATTTTGTAAAAG+AGG + chr7_2:77448006-77448025 Msa1078490:CDS 35.0%
!!! GGCTTATTTTGTAAAAGAGG+TGG + chr7_2:77448009-77448028 Msa1078490:CDS 35.0%
! TTTTGTAAAAGAGGTGGATG+AGG + chr7_2:77448015-77448034 Msa1078490:CDS 35.0%
AGTTAGTAACACCTTCAACA+GGG - chr7_2:77448066-77448085 None:intergenic 35.0%
! TCTGAGTTTACTTCTGAAGA+CGG + chr7_2:77448085-77448104 Msa1078490:CDS 35.0%
TGATCATAGCGTATCTGATT+CGG + chr7_2:77448141-77448160 Msa1078490:CDS 35.0%
! AGTTTTGCCAGAACTTCAAA+AGG + chr7_2:77448198-77448217 Msa1078490:CDS 35.0%
ATAAAATGTCCGACCAACAT+CGG - chr7_2:77448230-77448249 None:intergenic 35.0%
AGAATATGGAGAGAATGTTG+TGG + chr7_2:77448297-77448316 Msa1078490:CDS 35.0%
!! TTGGCTCTAATTCTGAGATA+GGG - chr7_2:77448384-77448403 None:intergenic 35.0%
! GTGTTGCTGATTATGTTAGT+AGG + chr7_2:77448509-77448528 Msa1078490:CDS 35.0%
TCAGAGCTATAAATACTGGA+TGG - chr7_2:77448559-77448578 None:intergenic 35.0%
GAAGGTTGCCAAATAGAAAA+GGG + chr7_2:77448610-77448629 Msa1078490:CDS 35.0%
! GAGTGTTTTCAAAAGTTGCT+TGG + chr7_2:77448693-77448712 Msa1078490:CDS 35.0%
!!! TGAGTTTTGATTCACCAATG+AGG - chr7_2:77448773-77448792 None:intergenic 35.0%
ATTGGTGAATCAAAACTCAG+CGG + chr7_2:77448774-77448793 Msa1078490:CDS 35.0%
!!! AAGCCATTTTGGTTTGAGTA+AGG + chr7_2:77449116-77449135 Msa1078490:intron 35.0%
AGTCCTTACTCAAACCAAAA+TGG - chr7_2:77449122-77449141 None:intergenic 35.0%
!! TTCACTTTTCGAAAAGCAAG+AGG - chr7_2:77449567-77449586 None:intergenic 35.0%
!! GATTCCGAATCTGATTTGTT+TGG + chr7_2:77449636-77449655 Msa1078490:CDS 35.0%
AGAGCCAAACAAATCAGATT+CGG - chr7_2:77449643-77449662 None:intergenic 35.0%
GATGCTATCATCTCATTAGA+GGG - chr7_2:77449732-77449751 None:intergenic 35.0%
TGATGCTATCATCTCATTAG+AGG - chr7_2:77449733-77449752 None:intergenic 35.0%
GCATCATTGAATCTCAAAGA+TGG + chr7_2:77449747-77449766 Msa1078490:CDS 35.0%
TAACATTCAGTTTCTCTACG+AGG + chr7_2:77449781-77449800 Msa1078490:CDS 35.0%
AACATTCAGTTTCTCTACGA+GGG + chr7_2:77449782-77449801 Msa1078490:CDS 35.0%
AAGGTAAAGAACGATAGCAA+TGG - chr7_2:77450062-77450081 None:intergenic 35.0%
AAAATAGGGAAAGGAAATGC+AGG + chr7_2:77450202-77450221 Msa1078490:intron 35.0%
TGGTTGATCTTCACCAAAAA+TGG - chr7_2:77450404-77450423 None:intergenic 35.0%
! TGCTTTCAGATCTGATGTTT+TGG + chr7_2:77450664-77450683 Msa1078490:intron 35.0%
! GCTTTCAGATCTGATGTTTT+GGG + chr7_2:77450665-77450684 Msa1078490:intron 35.0%
! CTTTCAGATCTGATGTTTTG+GGG + chr7_2:77450666-77450685 Msa1078490:intron 35.0%
TGCCTTTAGTTGGAAAAGAT+TGG + chr7_2:77450696-77450715 Msa1078490:CDS 35.0%
GAAAATTTGGACCCCTAATT+TGG - chr7_2:77450954-77450973 None:intergenic 35.0%
! GAGTGATTTTTGCAAACACT+TGG + chr7_2:77451085-77451104 Msa1078490:intron 35.0%
!!! CAAGTCTGGTTTTTGCTTTA+TGG + chr7_2:77451219-77451238 Msa1078490:intron 35.0%
!! CATCTTTCCCTGTTTCTATT+TGG + chr7_2:77451425-77451444 Msa1078490:intron 35.0%
! TACCAGATCCTGATTTTGTT+AGG + chr7_2:77451647-77451666 Msa1078490:intron 35.0%
TTCCTAACAAAATCAGGATC+TGG - chr7_2:77451652-77451671 None:intergenic 35.0%
!!! CTTTTTGGTTAACCTGAAAC+AGG + chr7_2:77451734-77451753 Msa1078490:CDS 35.0%
GATGGAAAAACCTTACCAAA+AGG + chr7_2:77451900-77451919 Msa1078490:CDS 35.0%
! GAAATAACAACAGGTCCTTT+TGG - chr7_2:77451918-77451937 None:intergenic 35.0%
TTAAAAGTTCCTGACCTTCT+CGG - chr7_2:77451968-77451987 None:intergenic 35.0%
GATTATAACCCATTCTATGC+GGG + chr7_2:77452244-77452263 Msa1078490:CDS 35.0%
ATTATAACCCATTCTATGCG+GGG + chr7_2:77452245-77452264 Msa1078490:CDS 35.0%
CATTATAGATGCAGACCTTA+GGG - chr7_2:77452345-77452364 None:intergenic 35.0%
TTATGAACACTAATAGGGTG+AGG + chr7_2:77452431-77452450 Msa1078490:intron 35.0%
! TTGCAATTTTCATTTGTGGC+AGG + chr7_2:77452615-77452634 Msa1078490:intron 35.0%
TACACGGATTCTTTGGTATT+AGG + chr7_2:77452718-77452737 Msa1078490:three_prime_UTR 35.0%
! TGTAATTGTTTGGTATTGGG+CGG + chr7_2:77452853-77452872 Msa1078490:three_prime_UTR 35.0%
TGCTATATGTTCGAACTACT+TGG + chr7_2:77452898-77452917 Msa1078490:three_prime_UTR 35.0%
! AGTAAGTCACTTTACAAGCA+AGG - chr7_2:77452936-77452955 None:intergenic 35.0%
TTAGGGGTTGGAATGGAATT+TGG - chr7_2:77447251-77447270 None:intergenic 40.0%
TTACAAGTTAGGGGTTGGAA+TGG - chr7_2:77447258-77447277 None:intergenic 40.0%
TGTTGTGGGCTTACAAGTTA+GGG - chr7_2:77447268-77447287 None:intergenic 40.0%
TTGTTGTGGGCTTACAAGTT+AGG - chr7_2:77447269-77447288 None:intergenic 40.0%
! CTTTCTTGCAGTGCTTTGAA+TGG - chr7_2:77447320-77447339 None:intergenic 40.0%
GAGTTAGTAACACCTTCAAC+AGG - chr7_2:77448067-77448086 None:intergenic 40.0%
GATCATAGCGTATCTGATTC+GGG + chr7_2:77448142-77448161 Msa1078490:CDS 40.0%
! ATCATAGCGTATCTGATTCG+GGG + chr7_2:77448143-77448162 Msa1078490:CDS 40.0%
TTTGCCAGAACTTCAAAAGG+TGG + chr7_2:77448201-77448220 Msa1078490:CDS 40.0%
!!! GATTCCACCTTTTGAAGTTC+TGG - chr7_2:77448208-77448227 None:intergenic 40.0%
TCAGCCGAATCTTCAATTGT+TGG - chr7_2:77448271-77448290 None:intergenic 40.0%
!! TCGGCTGATTTGTCAGAATA+TGG + chr7_2:77448283-77448302 Msa1078490:CDS 40.0%
!! TGGCTCTAATTCTGAGATAG+GGG - chr7_2:77448383-77448402 None:intergenic 40.0%
!! GTTGGCTCTAATTCTGAGAT+AGG - chr7_2:77448385-77448404 None:intergenic 40.0%
! GACTGCAAATTTTCCTCAGT+TGG - chr7_2:77448403-77448422 None:intergenic 40.0%
TGATTTCTACGAAGGCAATG+AGG + chr7_2:77448462-77448481 Msa1078490:CDS 40.0%
! TGCTGATTATGTTAGTAGGC+CGG + chr7_2:77448513-77448532 Msa1078490:CDS 40.0%
GATATCGGTAATAGTGCTTC+CGG + chr7_2:77448577-77448596 Msa1078490:CDS 40.0%
ATATCGGTAATAGTGCTTCC+GGG + chr7_2:77448578-77448597 Msa1078490:CDS 40.0%
CGAAGGTTGCCAAATAGAAA+AGG + chr7_2:77448609-77448628 Msa1078490:CDS 40.0%
AAAGGGACCTATTTGTCACA+CGG + chr7_2:77448627-77448646 Msa1078490:CDS 40.0%
AGCTGCATCATGCATGAATT+CGG + chr7_2:77448669-77448688 Msa1078490:CDS 40.0%
! CTTAAATGAACTTGCTCAGC+AGG + chr7_2:77448717-77448736 Msa1078490:CDS 40.0%
ACAAGATGAAAGGTCCTCAT+TGG + chr7_2:77448756-77448775 Msa1078490:CDS 40.0%
!! GGTTGATAAAGATGCATCAG+TGG + chr7_2:77448945-77448964 Msa1078490:CDS 40.0%
ACTTTGTGGTCACGAACTTA+AGG + chr7_2:77449248-77449267 Msa1078490:CDS 40.0%
TCAGAGAGAGTTATCTACCA+TGG + chr7_2:77449385-77449404 Msa1078490:CDS 40.0%
CAGAGAGAGTTATCTACCAT+GGG + chr7_2:77449386-77449405 Msa1078490:CDS 40.0%
GAGTTATCTACCATGGGAAA+AGG + chr7_2:77449392-77449411 Msa1078490:CDS 40.0%
CACAGGAATTGTATCTTCAG+GGG - chr7_2:77449469-77449488 None:intergenic 40.0%
CCACAGGAATTGTATCTTCA+GGG - chr7_2:77449470-77449489 None:intergenic 40.0%
CCTGAAGATACAATTCCTGT+GGG + chr7_2:77449468-77449487 Msa1078490:CDS 40.0%
! TAGTGGTGATGAATCAAGTG+AGG + chr7_2:77449602-77449621 Msa1078490:CDS 40.0%
! TTCTAGGAACACAACAGGTT+TGG + chr7_2:77449805-77449824 Msa1078490:intron 40.0%
!! CTGGCCATTTTGCTTATTTC+AGG + chr7_2:77449873-77449892 Msa1078490:intron 40.0%
! GTACTGTCAGTAGTCTTACT+TGG - chr7_2:77449992-77450011 None:intergenic 40.0%
GACTACTGACAGTACTTCTT+AGG + chr7_2:77449997-77450016 Msa1078490:intron 40.0%
TTGCATGGTATGTCCAAACT+GGG - chr7_2:77450138-77450157 None:intergenic 40.0%
TTTGCATGGTATGTCCAAAC+TGG - chr7_2:77450139-77450158 None:intergenic 40.0%
GAAAAGATTGGAACCAGACT+GGG + chr7_2:77450708-77450727 Msa1078490:CDS 40.0%
AAAAGATTGGAACCAGACTG+GGG + chr7_2:77450709-77450728 Msa1078490:CDS 40.0%
! AAGGCTTTTCTCTGCCATTA+AGG + chr7_2:77450736-77450755 Msa1078490:CDS 40.0%
ACAACGTGCTTCCCAAATTA+GGG + chr7_2:77450939-77450958 Msa1078490:intron 40.0%
CACACATTAACAGGTTTCCT+AGG + chr7_2:77451132-77451151 Msa1078490:intron 40.0%
! AGGAACTTGCTTAAGTTCCT+AGG - chr7_2:77451152-77451171 None:intergenic 40.0%
TAAGCAAGTTCCTTTGAGCT+TGG + chr7_2:77451159-77451178 Msa1078490:intron 40.0%
AAGCAAGTTCCTTTGAGCTT+GGG + chr7_2:77451160-77451179 Msa1078490:intron 40.0%
AATCTCAAACCCAAGCTCAA+AGG - chr7_2:77451172-77451191 None:intergenic 40.0%
ACGCAGTGAAGTCATTAAAG+AGG - chr7_2:77451401-77451420 None:intergenic 40.0%
TTCTACAGGAATGGTGTAGA+AGG - chr7_2:77451493-77451512 None:intergenic 40.0%
TATAAGCCTGGACAATAGCA+CGG - chr7_2:77451704-77451723 None:intergenic 40.0%
TTGTCCAGGCTTATATAACC+AGG + chr7_2:77451709-77451728 Msa1078490:CDS 40.0%
AGTTCCTGGTTATATAAGCC+TGG - chr7_2:77451716-77451735 None:intergenic 40.0%
CAGGTTAACCAAAAAGTTCC+TGG - chr7_2:77451730-77451749 None:intergenic 40.0%
AGTTATGGTATCAGCCTATC+AGG - chr7_2:77451868-77451887 None:intergenic 40.0%
! AACAACAGGTCCTTTTGGTA+AGG - chr7_2:77451913-77451932 None:intergenic 40.0%
CCATCAGGTGAAATAACAAC+AGG - chr7_2:77451927-77451946 None:intergenic 40.0%
!! CCTGTTGTTATTTCACCTGA+TGG + chr7_2:77451924-77451943 Msa1078490:CDS 40.0%
CAAGCAATCTTGAACTCATG+AGG - chr7_2:77452084-77452103 None:intergenic 40.0%
GTTCAAGATTGCTTGTCTAG+AGG + chr7_2:77452089-77452108 Msa1078490:CDS 40.0%
CCATTATAGATGCAGACCTT+AGG - chr7_2:77452346-77452365 None:intergenic 40.0%
CCTAAGGTCTGCATCTATAA+TGG + chr7_2:77452343-77452362 Msa1078490:intron 40.0%
! CAATTTTCATTTGTGGCAGG+AGG + chr7_2:77452618-77452637 Msa1078490:intron 40.0%
GTTGTGGGCTTACAAGTTAG+GGG - chr7_2:77447267-77447286 None:intergenic 45.0%
ACCACCAAAAGGGTGAAAAG+GGG - chr7_2:77447819-77447838 None:intergenic 45.0%
CACCACCAAAAGGGTGAAAA+GGG - chr7_2:77447820-77447839 None:intergenic 45.0%
CATCAACAGCACCACCAAAA+GGG - chr7_2:77447829-77447848 None:intergenic 45.0%
ACATCAACAGCACCACCAAA+AGG - chr7_2:77447830-77447849 None:intergenic 45.0%
ACGCCTTGGTATGTAAGGTT+TGG + chr7_2:77447887-77447906 Msa1078490:CDS 45.0%
! GTATCTTGATAATTCCGGGG+AGG + chr7_2:77447988-77448007 Msa1078490:CDS 45.0%
GACTCAAATGTCCCTGTTGA+AGG + chr7_2:77448052-77448071 Msa1078490:CDS 45.0%
!! TCATAGCGTATCTGATTCGG+GGG + chr7_2:77448144-77448163 Msa1078490:CDS 45.0%
CAAAAGGTGGAATCCGATGT+TGG + chr7_2:77448214-77448233 Msa1078490:CDS 45.0%
AGAGAATGTTGTGGACTTGC+AGG + chr7_2:77448306-77448325 Msa1078490:CDS 45.0%
GAGAATGTTGTGGACTTGCA+GGG + chr7_2:77448307-77448326 Msa1078490:CDS 45.0%
TTCTAATCCGGAGGTGATCT+TGG + chr7_2:77448330-77448349 Msa1078490:CDS 45.0%
! GTGATCTTGGTTAGCGTTGA+CGG + chr7_2:77448343-77448362 Msa1078490:CDS 45.0%
CTCAGAATTAGAGCCAACTG+AGG + chr7_2:77448387-77448406 Msa1078490:CDS 45.0%
TAGAAATCAGTCCCTTCACC+TGG - chr7_2:77448451-77448470 None:intergenic 45.0%
! GAAGGGACTGATTTCTACGA+AGG + chr7_2:77448454-77448473 Msa1078490:CDS 45.0%
! GGCAATGAGGAGTTTAGTTC+TGG + chr7_2:77448475-77448494 Msa1078490:CDS 45.0%
! ACATCAGCTGTTGAAGCATC+CGG - chr7_2:77448535-77448554 None:intergenic 45.0%
TATCGGTAATAGTGCTTCCG+GGG + chr7_2:77448579-77448598 Msa1078490:CDS 45.0%
GTTTCCTCCGTGTGACAAAT+AGG - chr7_2:77448637-77448656 None:intergenic 45.0%
ATTTGTCACACGGAGGAAAC+TGG + chr7_2:77448637-77448656 Msa1078490:CDS 45.0%
CTTGCTCAGCAGGATGATTA+TGG + chr7_2:77448727-77448746 Msa1078490:CDS 45.0%
GAAGAAGTAGCACCACTGAT+GGG - chr7_2:77448883-77448902 None:intergenic 45.0%
TGAAGAAGTAGCACCACTGA+TGG - chr7_2:77448884-77448903 None:intergenic 45.0%
CCATTCCACATCATTCGTAC+CGG - chr7_2:77448998-77449017 None:intergenic 45.0%
TCATTGGAAGTTGCTGTCTG+AGG - chr7_2:77449087-77449106 None:intergenic 45.0%
TCAGACAGCAACTTCCAATG+AGG + chr7_2:77449086-77449105 Msa1078490:CDS 45.0%
CAGACAGCAACTTCCAATGA+GGG + chr7_2:77449087-77449106 Msa1078490:CDS 45.0%
AGACAGCAACTTCCAATGAG+GGG + chr7_2:77449088-77449107 Msa1078490:CDS 45.0%
TTGTGGTCACGAACTTAAGG+CGG + chr7_2:77449251-77449270 Msa1078490:CDS 45.0%
AGCACATCGAATATCTGCTG+AGG + chr7_2:77449308-77449327 Msa1078490:CDS 45.0%
ATTGTATCTTCAGGGGCAAC+AGG - chr7_2:77449462-77449481 None:intergenic 45.0%
CCCTGAAGATACAATTCCTG+TGG + chr7_2:77449467-77449486 Msa1078490:CDS 45.0%
CCCACAGGAATTGTATCTTC+AGG - chr7_2:77449471-77449490 None:intergenic 45.0%
TTCCTGTGGGTCAAGATGAT+AGG + chr7_2:77449481-77449500 Msa1078490:CDS 45.0%
AACCTATCATCTTGACCCAC+AGG - chr7_2:77449486-77449505 None:intergenic 45.0%
AAGTCCAGCGATGATAATCC+TGG + chr7_2:77449507-77449526 Msa1078490:CDS 45.0%
AAGACAGCTGAGCACAATAG+TGG + chr7_2:77449585-77449604 Msa1078490:CDS 45.0%
! CTCCTCGCAAGCAATTTGTT+AGG + chr7_2:77449697-77449716 Msa1078490:CDS 45.0%
GTCCTAACAAATTGCTTGCG+AGG - chr7_2:77449702-77449721 None:intergenic 45.0%
AGTTTCTCTACGAGGGTTCT+AGG + chr7_2:77449789-77449808 Msa1078490:CDS 45.0%
!! GGAAGTGTTGAACAGGGATA+AGG - chr7_2:77450081-77450100 None:intergenic 45.0%
!! GAGTACGGAAGTGTTGAACA+GGG - chr7_2:77450087-77450106 None:intergenic 45.0%
!! TGAGTACGGAAGTGTTGAAC+AGG - chr7_2:77450088-77450107 None:intergenic 45.0%
GGAAAAGATTGGAACCAGAC+TGG + chr7_2:77450707-77450726 Msa1078490:CDS 45.0%
CACAACGTGCTTCCCAAATT+AGG + chr7_2:77450938-77450957 Msa1078490:intron 45.0%
CAACGTGCTTCCCAAATTAG+GGG + chr7_2:77450940-77450959 Msa1078490:intron 45.0%
!! CTAGAAGTGCTTGTTGCATC+TGG + chr7_2:77451063-77451082 Msa1078490:intron 45.0%
TAGAGAGTGAGCTTAAAGCC+TGG + chr7_2:77451195-77451214 Msa1078490:intron 45.0%
AGCAAAAACCAGACTTGACC+AGG - chr7_2:77451216-77451235 None:intergenic 45.0%
ATAAGCCTGGACAATAGCAC+GGG - chr7_2:77451703-77451722 None:intergenic 45.0%
AGGGACGGAAATAATCCATC+AGG - chr7_2:77451942-77451961 None:intergenic 45.0%
TTCCTGACCTTCTCGGTAAA+GGG - chr7_2:77451961-77451980 None:intergenic 45.0%
TGAACACTAATAGGGTGAGG+TGG + chr7_2:77452434-77452453 Msa1078490:intron 45.0%
GTTCAAGCAAAGACGTAGGA+GGG - chr7_2:77452524-77452543 None:intergenic 45.0%
TGTTCAAGCAAAGACGTAGG+AGG - chr7_2:77452525-77452544 None:intergenic 45.0%
TCCTACGTCTTTGCTTGAAC+AGG + chr7_2:77452524-77452543 Msa1078490:CDS 45.0%
ACCTGTTCAAGCAAAGACGT+AGG - chr7_2:77452528-77452547 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr7_2:77452824-77452843 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr7_2:77452825-77452844 None:intergenic 45.0%
GCGGCTGTCCAAAATGTTAA+CGG + chr7_2:77452872-77452891 Msa1078490:three_prime_UTR 45.0%
TGGGCTTACAAGTTAGGGGT+TGG - chr7_2:77447263-77447282 None:intergenic 50.0%
! GCTACCCCTTTTCACCCTTT+TGG + chr7_2:77447812-77447831 Msa1078490:CDS 50.0%
! ACCCCTTTTCACCCTTTTGG+TGG + chr7_2:77447815-77447834 Msa1078490:CDS 50.0%
GCACCACCAAAAGGGTGAAA+AGG - chr7_2:77447821-77447840 None:intergenic 50.0%
AGGTGGAATCCGATGTTGGT+CGG + chr7_2:77448218-77448237 Msa1078490:CDS 50.0%
! GGACTTGCAGGGTTCTAATC+CGG + chr7_2:77448318-77448337 Msa1078490:CDS 50.0%
ACGCTAACCAAGATCACCTC+CGG - chr7_2:77448340-77448359 None:intergenic 50.0%
CCTGGTCCCAAGTGAAATTG+AGG - chr7_2:77448433-77448452 None:intergenic 50.0%
CCTCAATTTCACTTGGGACC+AGG + chr7_2:77448430-77448449 Msa1078490:CDS 50.0%
TTTCACTTGGGACCAGGTGA+AGG + chr7_2:77448436-77448455 Msa1078490:CDS 50.0%
TTCACTTGGGACCAGGTGAA+GGG + chr7_2:77448437-77448456 Msa1078490:CDS 50.0%
CTATTTGGCAACCTTCGAGC+TGG - chr7_2:77448606-77448625 None:intergenic 50.0%
GGTGAATCAAAACTCAGCGG+AGG + chr7_2:77448777-77448796 Msa1078490:CDS 50.0%
GGTGAGTTATCTCCCATCAG+TGG + chr7_2:77448868-77448887 Msa1078490:CDS 50.0%
GCATCAGTGGAAGTTGACAC+TGG + chr7_2:77448958-77448977 Msa1078490:CDS 50.0%
!! GTGGAAGTTGACACTGGTTC+TGG + chr7_2:77448964-77448983 Msa1078490:CDS 50.0%
!! ACTGGTTCTGGCATTCGTTC+CGG + chr7_2:77448976-77448995 Msa1078490:CDS 50.0%
TCGTTCCGGTACGAATGATG+TGG + chr7_2:77448990-77449009 Msa1078490:CDS 50.0%
CCGGTACGAATGATGTGGAA+TGG + chr7_2:77448995-77449014 Msa1078490:CDS 50.0%
GACAGCAACTTCCAATGAGG+GGG + chr7_2:77449089-77449108 Msa1078490:CDS 50.0%
!! ATGGCTTTGATCCCCCTCAT+TGG - chr7_2:77449103-77449122 None:intergenic 50.0%
! GAGGGGGATCAAAGCCATTT+TGG + chr7_2:77449105-77449124 Msa1078490:CDS 50.0%
TGTGGTCACGAACTTAAGGC+GGG + chr7_2:77449252-77449271 Msa1078490:CDS 50.0%
TCACGAACTTAAGGCGGGTA+TGG + chr7_2:77449257-77449276 Msa1078490:CDS 50.0%
CACGAACTTAAGGCGGGTAT+GGG + chr7_2:77449258-77449277 Msa1078490:CDS 50.0%
TGGTCCAGGATTATCATCGC+TGG - chr7_2:77449514-77449533 None:intergenic 50.0%
AATCCTGGACCATCTTCGTC+TGG + chr7_2:77449522-77449541 Msa1078490:CDS 50.0%
!! GAGGGTTCTAGGAACACAAC+AGG + chr7_2:77449800-77449819 Msa1078490:CDS 50.0%
GGGAAAGGAAATGCAGGTTC+TGG + chr7_2:77450208-77450227 Msa1078490:intron 50.0%
GGGCAGTTCATGCCTTTAGT+TGG + chr7_2:77450686-77450705 Msa1078490:CDS 50.0%
GCTTAAAGCCTGGTCAAGTC+TGG + chr7_2:77451205-77451224 Msa1078490:intron 50.0%
GGGCACTCAAAAACAGTAGC+TGG - chr7_2:77451683-77451702 None:intergenic 50.0%
TTTCCGTCCCTTTACCGAGA+AGG + chr7_2:77451951-77451970 Msa1078490:CDS 50.0%
TGACCTTCTCGGTAAAGGGA+CGG - chr7_2:77451957-77451976 None:intergenic 50.0%
GTTCCTGACCTTCTCGGTAA+AGG - chr7_2:77451962-77451981 None:intergenic 50.0%
AACCCATTCTATGCGGGGTT+TGG + chr7_2:77452250-77452269 Msa1078490:CDS 50.0%
TGCCAAACCCCGCATAGAAT+GGG - chr7_2:77452255-77452274 None:intergenic 50.0%
TTGCCAAACCCCGCATAGAA+TGG - chr7_2:77452256-77452275 None:intergenic 50.0%
ATGTAGCCAACCCCACTTAG+TGG + chr7_2:77452811-77452830 Msa1078490:three_prime_UTR 50.0%
TGTAGCCAACCCCACTTAGT+GGG + chr7_2:77452812-77452831 Msa1078490:three_prime_UTR 50.0%
CTTATCCCACTAAGTGGGGT+TGG - chr7_2:77452820-77452839 None:intergenic 50.0%
CAACCCCACTTAGTGGGATA+AGG + chr7_2:77452818-77452837 Msa1078490:three_prime_UTR 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr7_2:77452826-77452845 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr7_2:77452823-77452842 Msa1078490:three_prime_UTR 50.0%
! GAACTTTTCGGAGCACGCCT+TGG + chr7_2:77447873-77447892 Msa1078490:CDS 55.0%
GGAGCACGCCTTGGTATGTA+AGG + chr7_2:77447882-77447901 Msa1078490:CDS 55.0%
TCGGGGGCAATTCAGTTGAC+AGG + chr7_2:77448160-77448179 Msa1078490:CDS 55.0%
! CTTGCAGGGTTCTAATCCGG+AGG + chr7_2:77448321-77448340 Msa1078490:CDS 55.0%
GGGACCTATTTGTCACACGG+AGG + chr7_2:77448630-77448649 Msa1078490:CDS 55.0%
CACTCCAAGAACAAGAGGGG+CGG - chr7_2:77449418-77449437 None:intergenic 55.0%
CGCCACTCCAAGAACAAGAG+GGG - chr7_2:77449421-77449440 None:intergenic 55.0%
CCGCCACTCCAAGAACAAGA+GGG - chr7_2:77449422-77449441 None:intergenic 55.0%
CCCTCTTGTTCTTGGAGTGG+CGG + chr7_2:77449419-77449438 Msa1078490:CDS 55.0%
GACCATCTTCGTCTGGACGT+AGG + chr7_2:77449529-77449548 Msa1078490:CDS 55.0%
CACCTACGTCCAGACGAAGA+TGG - chr7_2:77449534-77449553 None:intergenic 55.0%
CATCTTCGTCTGGACGTAGG+TGG + chr7_2:77449532-77449551 Msa1078490:CDS 55.0%
GTTGAGCCATCTCCAACCTC+AGG + chr7_2:77449663-77449682 Msa1078490:CDS 55.0%
AGCCATCTCCAACCTCAGGT+AGG + chr7_2:77449667-77449686 Msa1078490:CDS 55.0%
AGCCTACCTGAGGTTGGAGA+TGG - chr7_2:77449672-77449691 None:intergenic 55.0%
GACTCAAGCCTACCTGAGGT+TGG - chr7_2:77449678-77449697 None:intergenic 55.0%
AGGAGACTCAAGCCTACCTG+AGG - chr7_2:77449682-77449701 None:intergenic 55.0%
AGATTGGAACCAGACTGGGG+TGG + chr7_2:77450712-77450731 Msa1078490:CDS 55.0%
GTCCCTTTACCGAGAAGGTC+AGG + chr7_2:77451956-77451975 Msa1078490:intron 55.0%
GGCAGGAGGACTTCAACTCT+TGG + chr7_2:77452632-77452651 Msa1078490:intron 55.0%
AAGGCCGCCCCTCTTGTTCT+TGG + chr7_2:77449411-77449430 Msa1078490:CDS 60.0%
CGCCCCTCTTGTTCTTGGAG+TGG + chr7_2:77449416-77449435 Msa1078490:CDS 60.0%
GCCGCCACTCCAAGAACAAG+AGG - chr7_2:77449423-77449442 None:intergenic 60.0%
CGTCCAGACGAAGATGGTCC+AGG - chr7_2:77449528-77449547 None:intergenic 60.0%
CTGGACGTAGGTGGAGACTC+TGG + chr7_2:77449541-77449560 Msa1078490:CDS 60.0%
AAAGCCTTGCCACCCCAGTC+TGG - chr7_2:77450724-77450743 None:intergenic 60.0%
! GAGTGCCCGTGCTATTGTCC+AGG + chr7_2:77451695-77451714 Msa1078490:CDS 60.0%
GCAACCTTCGAGCTGGACCC+CGG - chr7_2:77448599-77448618 None:intergenic 65.0%
! AGAGGGGCGGCCTTTTCCCA+TGG - chr7_2:77449405-77449424 None:intergenic 65.0%
GGAACCAGACTGGGGTGGCA+AGG + chr7_2:77450717-77450736 Msa1078490:CDS 65.0%
GCTTCCGGGGTCCAGCTCGA+AGG + chr7_2:77448592-77448611 Msa1078490:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 77447179 77452983 77447179 ID=Msa1078490;Name=Msa1078490
chr7_2 mRNA 77447179 77452983 77447179 ID=Msa1078490-mRNA-1;Parent=Msa1078490;Name=Msa1078490-mRNA-1;_AED=0.08;_eAED=0.08;_QI=389|1|1|1|0.9|0.81|11|293|868
chr7_2 exon 77447179 77447399 77447179 ID=Msa1078490-mRNA-1:exon:18961;Parent=Msa1078490-mRNA-1
chr7_2 exon 77447590 77449132 77447590 ID=Msa1078490-mRNA-1:exon:18962;Parent=Msa1078490-mRNA-1
chr7_2 exon 77449235 77449821 77449235 ID=Msa1078490-mRNA-1:exon:18963;Parent=Msa1078490-mRNA-1
chr7_2 exon 77449919 77449992 77449919 ID=Msa1078490-mRNA-1:exon:18964;Parent=Msa1078490-mRNA-1
chr7_2 exon 77450673 77450757 77450673 ID=Msa1078490-mRNA-1:exon:18965;Parent=Msa1078490-mRNA-1
chr7_2 exon 77451669 77451755 77451669 ID=Msa1078490-mRNA-1:exon:18966;Parent=Msa1078490-mRNA-1
chr7_2 exon 77451900 77451972 77451900 ID=Msa1078490-mRNA-1:exon:18967;Parent=Msa1078490-mRNA-1
chr7_2 exon 77452067 77452110 77452067 ID=Msa1078490-mRNA-1:exon:18968;Parent=Msa1078490-mRNA-1
chr7_2 exon 77452220 77452348 77452220 ID=Msa1078490-mRNA-1:exon:18969;Parent=Msa1078490-mRNA-1
chr7_2 exon 77452447 77452545 77452447 ID=Msa1078490-mRNA-1:exon:18970;Parent=Msa1078490-mRNA-1
chr7_2 exon 77452637 77452983 77452637 ID=Msa1078490-mRNA-1:exon:18971;Parent=Msa1078490-mRNA-1
chr7_2 five_prime_UTR 77447179 77447399 77447179 ID=Msa1078490-mRNA-1:five_prime_utr;Parent=Msa1078490-mRNA-1
chr7_2 five_prime_UTR 77447590 77447757 77447590 ID=Msa1078490-mRNA-1:five_prime_utr;Parent=Msa1078490-mRNA-1
chr7_2 CDS 77447758 77449132 77447758 ID=Msa1078490-mRNA-1:cds;Parent=Msa1078490-mRNA-1
chr7_2 CDS 77449235 77449821 77449235 ID=Msa1078490-mRNA-1:cds;Parent=Msa1078490-mRNA-1
chr7_2 CDS 77449919 77449992 77449919 ID=Msa1078490-mRNA-1:cds;Parent=Msa1078490-mRNA-1
chr7_2 CDS 77450673 77450757 77450673 ID=Msa1078490-mRNA-1:cds;Parent=Msa1078490-mRNA-1
chr7_2 CDS 77451669 77451755 77451669 ID=Msa1078490-mRNA-1:cds;Parent=Msa1078490-mRNA-1
chr7_2 CDS 77451900 77451972 77451900 ID=Msa1078490-mRNA-1:cds;Parent=Msa1078490-mRNA-1
chr7_2 CDS 77452067 77452110 77452067 ID=Msa1078490-mRNA-1:cds;Parent=Msa1078490-mRNA-1
chr7_2 CDS 77452220 77452348 77452220 ID=Msa1078490-mRNA-1:cds;Parent=Msa1078490-mRNA-1
chr7_2 CDS 77452447 77452545 77452447 ID=Msa1078490-mRNA-1:cds;Parent=Msa1078490-mRNA-1
chr7_2 CDS 77452637 77452690 77452637 ID=Msa1078490-mRNA-1:cds;Parent=Msa1078490-mRNA-1
chr7_2 three_prime_UTR 77452691 77452983 77452691 ID=Msa1078490-mRNA-1:three_prime_utr;Parent=Msa1078490-mRNA-1
Gene Sequence

>Msa1078490

ATGAATGTGGTGGGAAAATTTGGAACCTTGATAACTAAGGGTGTTTATTCAGTTGCTACCCCTTTTCACCCTTTTGGTGGTGCTGTTGATGTCATTGTTGTTCAGCAACAAGATGGAACTTTTCGGAGCACGCCTTGGTATGTAAGGTTTGGTAAATTTCAAGGTGTTCTCAAAGGTGCCGAGAAGATTGTGAAGATAAATGTTAATGGGGTTGAAGCGAATTTTCATATGTATCTTGATAATTCCGGGGAGGCTTATTTTGTAAAAGAGGTGGATGAGGATGATAAAAGTGTTGACTCAAATGTCCCTGTTGAAGGTGTTACTAACTCTGAGTTTACTTCTGAAGACGGTAGTGTTGAAATTGATATTACTGGTCATAGACTTGATCATAGCGTATCTGATTCGGGGGCAATTCAGTTGACAGGTGAAGATCATTCTTCAGTTTTGCCAGAACTTCAAAAGGTGGAATCCGATGTTGGTCGGACATTTTATGATTTTGAAGATGATCAACCAACAATTGAAGATTCGGCTGATTTGTCAGAATATGGAGAGAATGTTGTGGACTTGCAGGGTTCTAATCCGGAGGTGATCTTGGTTAGCGTTGACGGTCATATATTGACAGCCCCTATCTCAGAATTAGAGCCAACTGAGGAAAATTTGCAGTCACAAATTCCTCAATTTCACTTGGGACCAGGTGAAGGGACTGATTTCTACGAAGGCAATGAGGAGTTTAGTTCTGGTGAAAATGCAAGTGTTGCTGATTATGTTAGTAGGCCGGATGCTTCAACAGCTGATGTTCCATCCAGTATTTATAGCTCTGATATCGGTAATAGTGCTTCCGGGGTCCAGCTCGAAGGTTGCCAAATAGAAAAGGGACCTATTTGTCACACGGAGGAAACTGGCACAGAAGAAGCTGCATCATGCATGAATTCGGAGAGTGTTTTCAAAAGTTGCTTGGACTTAAATGAACTTGCTCAGCAGGATGATTATGGCAATTTACAAGATGAAAGGTCCTCATTGGTGAATCAAAACTCAGCGGAGGAATCTAATGAAAATTGTTCAAATGTTGATGAAAATGCAAAAGAGAGCATTAAACAATTTAGAAATATTGGTGAGTTATCTCCCATCAGTGGTGCTACTTCTTCAGACGACAGTAATTCTACAAATTTAAAATCAGAATTTCAAGGGGTTGATAAAGATGCATCAGTGGAAGTTGACACTGGTTCTGGCATTCGTTCCGGTACGAATGATGTGGAATGGAATGATAGTAATAGTCAAGAAACCACTGTACTTGAAATTATTAGTGAGGAAGATAATATAACAGCACCTCAGACAGCAACTTCCAATGAGGGGGATCAAAGCCATTTTGGTTTGAAATTTGATATCTCACTTTGTGGTCACGAACTTAAGGCGGGTATGGGTTTTATCGCTGCTGCTGAAGTGTTTGAAGCACATCGAATATCTGCTGAGGAATTTAGAGTCTCTGCGCCATCTATAACTAAGAATAAAAATCTTGTTGTGAAGTTCAGAGAGAGTTATCTACCATGGGAAAAGGCCGCCCCTCTTGTTCTTGGAGTGGCGGCATTTGATTTAGACTTACCTGTTGCCCCTGAAGATACAATTCCTGTGGGTCAAGATGATAGGTTGAAGTCCAGCGATGATAATCCTGGACCATCTTCGTCTGGACGTAGGTGGAGACTCTGGCCTCTTGCTTTTCGAAAAGTGAAGACAGCTGAGCACAATAGTGGTGATGAATCAAGTGAGGATATATTTCTAGATTCCGAATCTGATTTGTTTGGCTCTGTTGAGCCATCTCCAACCTCAGGTAGGCTTGAGTCTCCTCGCAAGCAATTTGTTAGGACAAATGTTCCCTCTAATGAGATGATAGCATCATTGAATCTCAAAGATGGTCAAAATATGGTAACATTCAGTTTCTCTACGAGGGTTCTAGGAACACAACAGGTTGATGCTCATATATATTTATGGAAGTGGAACGCAAGAATTGTAATTTCAGATGTGGATGGAACTATTACCAAATCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGAAAAGATTGGAACCAGACTGGGGTGGCAAGGCTTTTCTCTGCCATTAAGGAAAATGGATACCAGCTACTGTTTTTGAGTGCCCGTGCTATTGTCCAGGCTTATATAACCAGGAACTTTTTGGTTAACCTGAAACAGGATGGAAAAACCTTACCAAAAGGACCTGTTGTTATTTCACCTGATGGATTATTTCCGTCCCTTTACCGAGAAGTAATAAAAAGAGCTCCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAACCCATTCTATGCGGGGTTTGGCAATAGAGACACAGATGAACTTAGTTACAGTAAAATAGGAATTCCAAAGGGAAAAATATTTATCATTAACCCTAAGGGTGAGGTGGCAATAAGTCATCGTATCGATGCAAAATCTTATACATCACTACACACACTCGTCAATGACATGTTCCCTCCTACGTCTTTGCTTGAACAGGAGGACTTCAACTCTTGGAATTATTGGAGAGTGCCTATGCCAGATATTGATTAG
Protein sequence

>Msa1078490

MNVVGKFGTLITKGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKIVKINVNGVEANFHMYLDNSGEAYFVKEVDEDDKSVDSNVPVEGVTNSEFTSEDGSVEIDITGHRLDHSVSDSGAIQLTGEDHSSVLPELQKVESDVGRTFYDFEDDQPTIEDSADLSEYGENVVDLQGSNPEVILVSVDGHILTAPISELEPTEENLQSQIPQFHLGPGEGTDFYEGNEEFSSGENASVADYVSRPDASTADVPSSIYSSDIGNSASGVQLEGCQIEKGPICHTEETGTEEAASCMNSESVFKSCLDLNELAQQDDYGNLQDERSSLVNQNSAEESNENCSNVDENAKESIKQFRNIGELSPISGATSSDDSNSTNLKSEFQGVDKDASVEVDTGSGIRSGTNDVEWNDSNSQETTVLEIISEEDNITAPQTATSNEGDQSHFGLKFDISLCGHELKAGMGFIAAAEVFEAHRISAEEFRVSAPSITKNKNLVVKFRESYLPWEKAAPLVLGVAAFDLDLPVAPEDTIPVGQDDRLKSSDDNPGPSSSGRRWRLWPLAFRKVKTAEHNSGDESSEDIFLDSESDLFGSVEPSPTSGRLESPRKQFVRTNVPSNEMIASLNLKDGQNMVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWNQTGVARLFSAIKENGYQLLFLSARAIVQAYITRNFLVNLKQDGKTLPKGPVVISPDGLFPSLYREVIKRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYSKIGIPKGKIFIINPKGEVAISHRIDAKSYTSLHTLVNDMFPPTSLLEQEDFNSWNYWRVPMPDID*