Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1169390 | XP_003625549.1 | 96.544 | 868 | 29 | 1 | 1 | 868 | 1 | 867 | 0.0 | 1711 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1169390 | sp|Q9SF47|PAH1_ARATH | 53.433 | 932 | 342 | 21 | 1 | 868 | 1 | 904 | 0.0 | 894 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1169390 | G7L0Q2 | 96.544 | 868 | 29 | 1 | 1 | 868 | 1 | 867 | 0.0 | 1711 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1078490 | Msa1169390 | 0.950112 | 3.222595e-108 | -8.615850e-47 |
Msa1078540 | Msa1169390 | 0.942238 | 1.023277e-101 | -8.615850e-47 |
Msa1078670 | Msa1169390 | 0.944771 | 1.055131e-103 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1169390 | MtrunA17_Chr7g0263401 | 96.544 | 868 | 29 | 1 | 1 | 868 | 1 | 867 | 0.0 | 1711 |
Msa1169390 | MtrunA17_Chr1g0181991 | 61.257 | 955 | 253 | 21 | 1 | 868 | 1 | 925 | 0.0 | 1063 |
Msa1169390 | MtrunA17_Chr3g0133821 | 66.561 | 314 | 87 | 3 | 559 | 863 | 523 | 827 | 2.84e-139 | 434 |
Msa1169390 | MtrunA17_Chr3g0133821 | 70.526 | 95 | 28 | 0 | 1 | 95 | 1 | 95 | 9.52e-40 | 158 |
Msa1169390 | MtrunA17_Chr1g0153651 | 74.219 | 256 | 64 | 2 | 609 | 863 | 261 | 515 | 2.32e-132 | 405 |
Msa1169390 | MtrunA17_Chr1g0153651 | 58.242 | 91 | 35 | 2 | 1 | 88 | 1 | 91 | 6.29e-26 | 112 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1169390 | AT3G09560.3 | 53.433 | 932 | 342 | 21 | 1 | 868 | 1 | 904 | 0.0 | 894 |
Msa1169390 | AT3G09560.1 | 53.433 | 932 | 342 | 21 | 1 | 868 | 1 | 904 | 0.0 | 894 |
Msa1169390 | AT3G09560.2 | 53.433 | 932 | 342 | 21 | 1 | 868 | 1 | 904 | 0.0 | 894 |
Msa1169390 | AT3G09560.4 | 53.433 | 932 | 342 | 21 | 1 | 868 | 1 | 904 | 0.0 | 894 |
Msa1169390 | AT5G42870.1 | 58.596 | 413 | 141 | 7 | 461 | 867 | 541 | 929 | 8.68e-161 | 493 |
Msa1169390 | AT5G42870.1 | 60.215 | 93 | 37 | 0 | 1 | 93 | 1 | 93 | 1.96e-33 | 139 |
Msa1169390 | AT5G42870.2 | 57.627 | 413 | 140 | 8 | 461 | 867 | 541 | 924 | 3.52e-155 | 479 |
Msa1169390 | AT5G42870.2 | 60.215 | 93 | 37 | 0 | 1 | 93 | 1 | 93 | 1.74e-33 | 139 |
Msa1169390 | AT5G42870.3 | 57.967 | 364 | 123 | 7 | 461 | 818 | 541 | 880 | 4.99e-134 | 422 |
Msa1169390 | AT5G42870.3 | 60.215 | 93 | 37 | 0 | 1 | 93 | 1 | 93 | 1.60e-33 | 139 |
Find 249 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAGAAAAGTTCCAGAATTT+TGG | 0.130476 | 7_4:-62389336 | None:intergenic |
TAGCATTTCCGTTAACATTT+TGG | 0.146903 | 7_4:-62394522 | None:intergenic |
GTTCTATCATAAAACATATT+TGG | 0.187069 | 7_4:-62394410 | None:intergenic |
TGCTTTCAGATCTGATGTTT+TGG | 0.192008 | 7_4:+62392294 | Msa1169390:intron |
ACTTCAACTCTTGGAATTAT+TGG | 0.208357 | 7_4:+62394283 | Msa1169390:CDS |
TTAGGGGTTGGAATGGAATT+TGG | 0.209118 | 7_4:-62388881 | None:intergenic |
TTGATGCTCATATATATTTA+TGG | 0.222189 | 7_4:+62391550 | Msa1169390:CDS |
ATTAAACAATTTAGAAATAT+TGG | 0.228590 | 7_4:+62390477 | Msa1169390:CDS |
ATGAATGTGGTGGGAAAATT+TGG | 0.229388 | 7_4:+62389388 | Msa1169390:CDS |
TTTGTTTAAATACCTGTTTC+AGG | 0.232511 | 7_4:-62393376 | None:intergenic |
CATATGTATCTTGATAATTC+CGG | 0.248335 | 7_4:+62389613 | Msa1169390:CDS |
TACACGGATTCTTTGGTATT+AGG | 0.256009 | 7_4:+62394360 | Msa1169390:three_prime_UTR |
TCGGCTGATTTGTCAGAATA+TGG | 0.264818 | 7_4:+62389913 | Msa1169390:CDS |
CCCTGATGAGGTTGAAATTC+TGG | 0.275882 | 7_4:+62388801 | None:intergenic |
GAACTTAGTTACAGTAAAAT+AGG | 0.277495 | 7_4:+62393931 | Msa1169390:CDS |
AGTTTCTCTACGAGGGTTCT+AGG | 0.286566 | 7_4:+62391419 | Msa1169390:CDS |
TTGTTGTGGGCTTACAAGTT+AGG | 0.289505 | 7_4:-62388899 | None:intergenic |
TTGTTGTAATTGTTTGGTAT+TGG | 0.311081 | 7_4:+62394491 | Msa1169390:three_prime_UTR |
AGTCCTTACTCAAACCAAAA+TGG | 0.312761 | 7_4:-62390749 | None:intergenic |
TCTCAAAGATGGTCAAAATA+TGG | 0.321607 | 7_4:+62391388 | Msa1169390:CDS |
CAACTAAATAGATACCTTAA+TGG | 0.323620 | 7_4:-62392380 | None:intergenic |
TTGTGAAGATAAATGTTAAT+GGG | 0.325693 | 7_4:+62389575 | Msa1169390:CDS |
CTTTCTTGCAGTGCTTTGAA+TGG | 0.327500 | 7_4:-62388950 | None:intergenic |
AGTGTTGAAATTGATATTAC+TGG | 0.332390 | 7_4:+62389739 | Msa1169390:CDS |
AAGGCCGCCCCTCTTGTTCT+TGG | 0.341180 | 7_4:+62391041 | Msa1169390:CDS |
TGCCTTTAGTTGGAAAAGAT+TGG | 0.344724 | 7_4:+62392326 | Msa1169390:CDS |
TGTTGTAATTGTTTGGTATT+GGG | 0.346409 | 7_4:+62394492 | Msa1169390:three_prime_UTR |
AACCCATTCTATGCGGGGTT+TGG | 0.347079 | 7_4:+62393892 | Msa1169390:CDS |
CTTGCTCAGCAGGATGATTA+TGG | 0.349602 | 7_4:+62390357 | Msa1169390:CDS |
GATTCCGAATCTGATTTGTT+TGG | 0.352962 | 7_4:+62391266 | Msa1169390:CDS |
GATCATAGCGTATCTGATTC+GGG | 0.353087 | 7_4:+62389772 | Msa1169390:CDS |
GAGGTTGAAATTCTGGTATT+AGG | 0.354716 | 7_4:+62388808 | None:intergenic |
TGTTGTGGGCTTACAAGTTA+GGG | 0.358566 | 7_4:-62388898 | None:intergenic |
GATATCGGTAATAGTGCTTC+CGG | 0.358681 | 7_4:+62390207 | Msa1169390:CDS |
GAAATAACAACAGGTCCTTT+TGG | 0.363480 | 7_4:-62393545 | None:intergenic |
TTAAAAGTTCCTGACCTTCT+CGG | 0.364505 | 7_4:-62393595 | None:intergenic |
AAATTCAGATAATCGATTCT+TGG | 0.365245 | 7_4:+62389243 | Msa1169390:five_prime_UTR |
ATATGTATCTTGATAATTCC+GGG | 0.366297 | 7_4:+62389614 | Msa1169390:CDS |
ATTTATCTTCACAATCTTCT+CGG | 0.372459 | 7_4:-62389566 | None:intergenic |
GGCAATGAGGAGTTTAGTTC+TGG | 0.375234 | 7_4:+62390105 | Msa1169390:CDS |
CTGAATTTCTTGATTAGTTA+CGG | 0.377236 | 7_4:-62389228 | None:intergenic |
ATTGTGAAGATAAATGTTAA+TGG | 0.378629 | 7_4:+62389574 | Msa1169390:CDS |
TGGTTGTTGTTGTAATTGTT+TGG | 0.380204 | 7_4:+62394485 | Msa1169390:three_prime_UTR |
TGATCATAGCGTATCTGATT+CGG | 0.384025 | 7_4:+62389771 | Msa1169390:CDS |
TGATGCTATCATCTCATTAG+AGG | 0.387912 | 7_4:-62391360 | None:intergenic |
GTGGAAGTTGACACTGGTTC+TGG | 0.389318 | 7_4:+62390594 | Msa1169390:CDS |
CCCACAGGAATTGTATCTTC+AGG | 0.392472 | 7_4:-62391098 | None:intergenic |
ACATAGAACTAATCAATATC+TGG | 0.393486 | 7_4:-62394318 | None:intergenic |
ATTTGTCACACGGAGGAAAC+TGG | 0.394153 | 7_4:+62390267 | Msa1169390:CDS |
GATATCAGAGCTATAAATAC+TGG | 0.396300 | 7_4:-62390190 | None:intergenic |
GAATTTGATATCTCACTTTG+TGG | 0.396349 | 7_4:+62390864 | Msa1169390:intron |
GTTGGCTCTAATTCTGAGAT+AGG | 0.398990 | 7_4:-62390012 | None:intergenic |
GTTTCCTCCGTGTGACAAAT+AGG | 0.403271 | 7_4:-62390264 | None:intergenic |
GAGTTAGTAACACCTTCAAC+AGG | 0.404417 | 7_4:-62389694 | None:intergenic |
GTAAGGTTTGGTAAATTTCA+AGG | 0.404862 | 7_4:+62389529 | Msa1169390:CDS |
TTCTAATCCGGAGGTGATCT+TGG | 0.405144 | 7_4:+62389960 | Msa1169390:CDS |
AATTCAGATAATCGATTCTT+GGG | 0.407555 | 7_4:+62389244 | Msa1169390:five_prime_UTR |
TCCTACGTCTTTGCTTGAAC+AGG | 0.407811 | 7_4:+62394166 | Msa1169390:CDS |
ACTTTGTGGTCACGAACTTA+AGG | 0.409783 | 7_4:+62390878 | Msa1169390:CDS |
CACCACCAAAAGGGTGAAAA+GGG | 0.410706 | 7_4:-62389447 | None:intergenic |
TTGCCAAACCCCGCATAGAA+TGG | 0.414444 | 7_4:-62393895 | None:intergenic |
AGTATTTATAGCTCTGATAT+CGG | 0.417244 | 7_4:+62390192 | Msa1169390:CDS |
ATATCGGTAATAGTGCTTCC+GGG | 0.417611 | 7_4:+62390208 | Msa1169390:CDS |
ATTTGGAACCTTGATAACTA+AGG | 0.420387 | 7_4:+62389405 | Msa1169390:CDS |
TAATTAATTAAAAGTTTCTT+CGG | 0.424312 | 7_4:+62389299 | Msa1169390:five_prime_UTR |
AGAGAATGTTGTGGACTTGC+AGG | 0.425386 | 7_4:+62389936 | Msa1169390:CDS |
TCACGAACTTAAGGCGGGTA+TGG | 0.425429 | 7_4:+62390887 | Msa1169390:CDS |
AGCTGCATCATGCATGAATT+CGG | 0.430128 | 7_4:+62390299 | Msa1169390:CDS |
GAGTGCCCGTGCTATTGTCC+AGG | 0.431287 | 7_4:+62393325 | Msa1169390:CDS |
CTTAAATGAACTTGCTCAGC+AGG | 0.432746 | 7_4:+62390347 | Msa1169390:CDS |
GGCAGGAGGACTTCAACTCT+TGG | 0.432981 | 7_4:+62394274 | Msa1169390:intron |
CTCATATATATTTATGGAAG+TGG | 0.433128 | 7_4:+62391556 | Msa1169390:CDS |
GCACCACCAAAAGGGTGAAA+AGG | 0.435072 | 7_4:-62389448 | None:intergenic |
CCTCAATTTCACTTGGGACC+AGG | 0.436900 | 7_4:+62390060 | Msa1169390:CDS |
CGAAGGTTGCCAAATAGAAA+AGG | 0.437602 | 7_4:+62390239 | Msa1169390:CDS |
ATTGTATCTTCAGGGGCAAC+AGG | 0.437634 | 7_4:-62391089 | None:intergenic |
GGGCAGTTCATGCCTTTAGT+TGG | 0.438033 | 7_4:+62392316 | Msa1169390:CDS |
CTCCTCGCAAGCAATTTGTT+AGG | 0.441589 | 7_4:+62391327 | Msa1169390:CDS |
GTGATCTTGGTTAGCGTTGA+CGG | 0.444536 | 7_4:+62389973 | Msa1169390:CDS |
TTCCTGACCTTCTCGGTAAA+GGG | 0.446468 | 7_4:-62393588 | None:intergenic |
ACAAGATGAAAGGTCCTCAT+TGG | 0.448766 | 7_4:+62390386 | Msa1169390:CDS |
CCTGTTGTTATTTCACCTGA+TGG | 0.449780 | 7_4:+62393554 | Msa1169390:CDS |
GTTCCTGACCTTCTCGGTAA+AGG | 0.453457 | 7_4:-62393589 | None:intergenic |
TGCTATATGTTCGAACTACT+TGG | 0.453590 | 7_4:+62394540 | Msa1169390:three_prime_UTR |
GGAGCACGCCTTGGTATGTA+AGG | 0.453862 | 7_4:+62389512 | Msa1169390:CDS |
TCAGCCGAATCTTCAATTGT+TGG | 0.454790 | 7_4:-62389898 | None:intergenic |
ATAAACACCCTTAGTTATCA+AGG | 0.455833 | 7_4:-62389413 | None:intergenic |
GACTCAAATGTCCCTGTTGA+AGG | 0.461533 | 7_4:+62389682 | Msa1169390:CDS |
GGAAAAGATTGGAACCAGAC+TGG | 0.467033 | 7_4:+62392337 | Msa1169390:CDS |
ACTGGTTCTGGCATTCGTTC+CGG | 0.467940 | 7_4:+62390606 | Msa1169390:CDS |
ACGCCTTGGTATGTAAGGTT+TGG | 0.469262 | 7_4:+62389517 | Msa1169390:CDS |
GTGTTGCTGATTATGTTAGT+AGG | 0.469363 | 7_4:+62390139 | Msa1169390:CDS |
TCAACCAACAATTGAAGATT+CGG | 0.477254 | 7_4:+62389894 | Msa1169390:CDS |
GGACTTGCAGGGTTCTAATC+CGG | 0.477849 | 7_4:+62389948 | Msa1169390:CDS |
AAGTCCAGCGATGATAATCC+TGG | 0.480068 | 7_4:+62391137 | Msa1169390:CDS |
CAACCCCACTTAGTGGGATA+AGG | 0.480548 | 7_4:+62394460 | Msa1169390:three_prime_UTR |
TTGGCTCTAATTCTGAGATA+GGG | 0.481968 | 7_4:-62390011 | None:intergenic |
CCACAGGAATTGTATCTTCA+GGG | 0.482375 | 7_4:-62391097 | None:intergenic |
CTATTTGGCAACCTTCGAGC+TGG | 0.483317 | 7_4:-62390233 | None:intergenic |
ACATCAACAGCACCACCAAA+AGG | 0.484992 | 7_4:-62389457 | None:intergenic |
CACGAACTTAAGGCGGGTAT+GGG | 0.485013 | 7_4:+62390888 | Msa1169390:CDS |
GCAACCTTCGAGCTGGACCC+CGG | 0.485525 | 7_4:-62390226 | None:intergenic |
TGGGCTTACAAGTTAGGGGT+TGG | 0.486544 | 7_4:-62388893 | None:intergenic |
GATTATAACCCATTCTATGC+GGG | 0.488504 | 7_4:+62393886 | Msa1169390:CDS |
GAAAAGATTGGAACCAGACT+GGG | 0.489336 | 7_4:+62392338 | Msa1169390:CDS |
ACATCAGCTGTTGAAGCATC+CGG | 0.489891 | 7_4:-62390162 | None:intergenic |
AGAGCCAAACAAATCAGATT+CGG | 0.494261 | 7_4:-62391270 | None:intergenic |
CGTCCAGACGAAGATGGTCC+AGG | 0.496672 | 7_4:-62391155 | None:intergenic |
TTCCTGTGGGTCAAGATGAT+AGG | 0.496718 | 7_4:+62391111 | Msa1169390:CDS |
CCACTTAGTGGGATAAGGCT+TGG | 0.499202 | 7_4:+62394465 | Msa1169390:three_prime_UTR |
CGCCCCTCTTGTTCTTGGAG+TGG | 0.499616 | 7_4:+62391046 | Msa1169390:CDS |
AATATTTATCATTAACCCTA+AGG | 0.500228 | 7_4:+62393969 | Msa1169390:CDS |
AATCCTGGACCATCTTCGTC+TGG | 0.500733 | 7_4:+62391152 | Msa1169390:CDS |
GCGGCTGTCCAAAATGTTAA+CGG | 0.501411 | 7_4:+62394514 | Msa1169390:three_prime_UTR |
GAGTTATCTACCATGGGAAA+AGG | 0.503668 | 7_4:+62391022 | Msa1169390:CDS |
TGCCAAACCCCGCATAGAAT+GGG | 0.504754 | 7_4:-62393894 | None:intergenic |
TTCTTTCTTTCAGTAGTCAG+AGG | 0.505355 | 7_4:-62389366 | None:intergenic |
ATTTAAAATCAGAATTTCAA+GGG | 0.506367 | 7_4:+62390553 | Msa1169390:CDS |
ATGTAGCCAACCCCACTTAG+TGG | 0.507195 | 7_4:+62394453 | Msa1169390:three_prime_UTR |
AGTTCCTGGTTATATAAGCC+TGG | 0.510579 | 7_4:-62393343 | None:intergenic |
GAGGGTTCTAGGAACACAAC+AGG | 0.510904 | 7_4:+62391430 | Msa1169390:CDS |
CCATCAGGTGAAATAACAAC+AGG | 0.512658 | 7_4:-62393554 | None:intergenic |
CCTGGTCCCAAGTGAAATTG+AGG | 0.512878 | 7_4:-62390060 | None:intergenic |
AATTTAAAATCAGAATTTCA+AGG | 0.515613 | 7_4:+62390552 | Msa1169390:CDS |
AAAGCCTTGCCACCCCAGTC+TGG | 0.517161 | 7_4:-62392351 | None:intergenic |
ATTGTTGTTCAGCAACAAGA+TGG | 0.518652 | 7_4:+62389481 | Msa1169390:CDS |
AGGGACGGAAATAATCCATC+AGG | 0.519561 | 7_4:-62393569 | None:intergenic |
TAGAATGGGTTATAATCAGA+AGG | 0.527886 | 7_4:-62393880 | None:intergenic |
GTTGAGCCATCTCCAACCTC+AGG | 0.531698 | 7_4:+62391293 | Msa1169390:CDS |
ACAAATTCCTCAATTTCACT+TGG | 0.532985 | 7_4:+62390053 | Msa1169390:CDS |
TGAAGAAGTAGCACCACTGA+TGG | 0.536057 | 7_4:-62390511 | None:intergenic |
CTTATCCCACTAAGTGGGGT+TGG | 0.538908 | 7_4:-62394459 | None:intergenic |
ATTGTAATTTCAGATGTGGA+TGG | 0.540092 | 7_4:+62391588 | Msa1169390:CDS |
TTTCACTTGGGACCAGGTGA+AGG | 0.540389 | 7_4:+62390066 | Msa1169390:CDS |
TTTGGAACCTTGATAACTAA+GGG | 0.543072 | 7_4:+62389406 | Msa1169390:CDS |
GACTCAAGCCTACCTGAGGT+TGG | 0.546268 | 7_4:-62391305 | None:intergenic |
CCCTCTTGTTCTTGGAGTGG+CGG | 0.548536 | 7_4:+62391049 | Msa1169390:CDS |
CTGGACGTAGGTGGAGACTC+TGG | 0.548685 | 7_4:+62391171 | Msa1169390:CDS |
AAGACAGCTGAGCACAATAG+TGG | 0.548705 | 7_4:+62391215 | Msa1169390:CDS |
AGCCTACCTGAGGTTGGAGA+TGG | 0.549317 | 7_4:-62391299 | None:intergenic |
TTTCCGTCCCTTTACCGAGA+AGG | 0.550428 | 7_4:+62393581 | Msa1169390:CDS |
ATGGCAATTTACAAGATGAA+AGG | 0.551334 | 7_4:+62390376 | Msa1169390:CDS |
TGGTCCAGGATTATCATCGC+TGG | 0.553435 | 7_4:-62391141 | None:intergenic |
CAAATTCCTCAATTTCACTT+GGG | 0.554755 | 7_4:+62390054 | Msa1169390:CDS |
CCAAGCCTTATCCCACTAAG+TGG | 0.555227 | 7_4:-62394465 | None:intergenic |
CATCAACAGCACCACCAAAA+GGG | 0.556201 | 7_4:-62389456 | None:intergenic |
TTTGCCAGAACTTCAAAAGG+TGG | 0.556741 | 7_4:+62389831 | Msa1169390:CDS |
AACCTATCATCTTGACCCAC+AGG | 0.558319 | 7_4:-62391113 | None:intergenic |
GAAGGTTGCCAAATAGAAAA+GGG | 0.559450 | 7_4:+62390240 | Msa1169390:CDS |
GTTGTGGGCTTACAAGTTAG+GGG | 0.560528 | 7_4:-62388897 | None:intergenic |
TGCTGATTATGTTAGTAGGC+CGG | 0.561183 | 7_4:+62390143 | Msa1169390:CDS |
CCATTCCACATCATTCGTAC+CGG | 0.561582 | 7_4:-62390625 | None:intergenic |
CCCTGAAGATACAATTCCTG+TGG | 0.563260 | 7_4:+62391097 | Msa1169390:CDS |
TCTTTCTTTCAGTAGTCAGA+GGG | 0.563942 | 7_4:-62389365 | None:intergenic |
AACATTCAGTTTCTCTACGA+GGG | 0.564099 | 7_4:+62391412 | Msa1169390:CDS |
CAAGCCTTATCCCACTAAGT+GGG | 0.565284 | 7_4:-62394464 | None:intergenic |
GGAACCAGACTGGGGTGGCA+AGG | 0.569774 | 7_4:+62392347 | Msa1169390:CDS |
TTACAAGTTAGGGGTTGGAA+TGG | 0.571871 | 7_4:-62388888 | None:intergenic |
GCATCATTGAATCTCAAAGA+TGG | 0.573195 | 7_4:+62391377 | Msa1169390:CDS |
GTCCTAACAAATTGCTTGCG+AGG | 0.573977 | 7_4:-62391329 | None:intergenic |
ACTAATAATTTCAAGTACAG+TGG | 0.575677 | 7_4:-62390670 | None:intergenic |
TTCACTTGGGACCAGGTGAA+GGG | 0.578350 | 7_4:+62390067 | Msa1169390:CDS |
ATAAAATGTCCGACCAACAT+CGG | 0.579316 | 7_4:-62389857 | None:intergenic |
ACGCTAACCAAGATCACCTC+CGG | 0.579858 | 7_4:-62389967 | None:intergenic |
GATGCTATCATCTCATTAGA+GGG | 0.581965 | 7_4:-62391359 | None:intergenic |
TCATTGGAAGTTGCTGTCTG+AGG | 0.582855 | 7_4:-62390714 | None:intergenic |
CAAAAGGTGGAATCCGATGT+TGG | 0.583418 | 7_4:+62389844 | Msa1169390:CDS |
TCTGAGTTTACTTCTGAAGA+CGG | 0.583454 | 7_4:+62389715 | Msa1169390:CDS |
CAGAGAGAGTTATCTACCAT+GGG | 0.583701 | 7_4:+62391016 | Msa1169390:CDS |
AAATTTCAAGGTGTTCTCAA+AGG | 0.584146 | 7_4:+62389541 | Msa1169390:CDS |
TAGAAATCAGTCCCTTCACC+TGG | 0.588186 | 7_4:-62390078 | None:intergenic |
AAGAATTGTAATTTCAGATG+TGG | 0.588816 | 7_4:+62391584 | Msa1169390:CDS |
CCGGTACGAATGATGTGGAA+TGG | 0.589277 | 7_4:+62390625 | Msa1169390:CDS |
TGTTCAAGCAAAGACGTAGG+AGG | 0.592284 | 7_4:-62394164 | None:intergenic |
TGGCTCTAATTCTGAGATAG+GGG | 0.597023 | 7_4:-62390010 | None:intergenic |
TCAGAGAGAGTTATCTACCA+TGG | 0.597194 | 7_4:+62391015 | Msa1169390:CDS |
CCGCCACTCCAAGAACAAGA+GGG | 0.598140 | 7_4:-62391049 | None:intergenic |
CAGACAGCAACTTCCAATGA+GGG | 0.598692 | 7_4:+62390717 | Msa1169390:CDS |
TGTACTTGAAATTATTAGTG+AGG | 0.600231 | 7_4:+62390674 | Msa1169390:CDS |
TATAAGCCTGGACAATAGCA+CGG | 0.602894 | 7_4:-62393331 | None:intergenic |
CACCTACGTCCAGACGAAGA+TGG | 0.604562 | 7_4:-62391161 | None:intergenic |
GCCGCCACTCCAAGAACAAG+AGG | 0.605405 | 7_4:-62391050 | None:intergenic |
AGTAAGTCACTTTACAAGCA+AGG | 0.605483 | 7_4:-62394575 | None:intergenic |
GAAGAAGTAGCACCACTGAT+GGG | 0.605725 | 7_4:-62390510 | None:intergenic |
TTTAAAATCAGAATTTCAAG+GGG | 0.607929 | 7_4:+62390554 | Msa1169390:CDS |
GAGAATGTTGTGGACTTGCA+GGG | 0.608699 | 7_4:+62389937 | Msa1169390:CDS |
AGTAAAATAGGAATTCCAAA+GGG | 0.609251 | 7_4:+62393943 | Msa1169390:CDS |
TGTGGTCACGAACTTAAGGC+GGG | 0.610181 | 7_4:+62390882 | Msa1169390:CDS |
CAGTAAAATAGGAATTCCAA+AGG | 0.610652 | 7_4:+62393942 | Msa1169390:CDS |
TGTAGCCAACCCCACTTAGT+GGG | 0.611984 | 7_4:+62394454 | Msa1169390:three_prime_UTR |
ATTATAACCCATTCTATGCG+GGG | 0.612931 | 7_4:+62393887 | Msa1169390:CDS |
GTTCAAGATTGCTTGTCTAG+AGG | 0.613173 | 7_4:+62393731 | Msa1169390:CDS |
TTACCAAACCTTACATACCA+AGG | 0.615393 | 7_4:-62389520 | None:intergenic |
AGGTGGAATCCGATGTTGGT+CGG | 0.615446 | 7_4:+62389848 | Msa1169390:CDS |
TTGTGGTCACGAACTTAAGG+CGG | 0.615928 | 7_4:+62390881 | Msa1169390:CDS |
ATAAGCCTGGACAATAGCAC+GGG | 0.616334 | 7_4:-62393330 | None:intergenic |
CACTCCAAGAACAAGAGGGG+CGG | 0.618301 | 7_4:-62391045 | None:intergenic |
TGTGAAGATAAATGTTAATG+GGG | 0.619954 | 7_4:+62389576 | Msa1169390:CDS |
TCGTTCCGGTACGAATGATG+TGG | 0.621957 | 7_4:+62390620 | Msa1169390:CDS |
AACTAATCAATATCTGGCAT+AGG | 0.627013 | 7_4:-62394312 | None:intergenic |
CAAGCAATCTTGAACTCATG+AGG | 0.627073 | 7_4:-62393723 | None:intergenic |
CGCCACTCCAAGAACAAGAG+GGG | 0.627600 | 7_4:-62391048 | None:intergenic |
CATCTTCGTCTGGACGTAGG+TGG | 0.627651 | 7_4:+62391162 | Msa1169390:CDS |
AAAGAAAGAATGAATGTGGT+GGG | 0.628462 | 7_4:+62389379 | Msa1169390:exon |
GCATCAGTGGAAGTTGACAC+TGG | 0.631154 | 7_4:+62390588 | Msa1169390:CDS |
TGACCTTCTCGGTAAAGGGA+CGG | 0.631465 | 7_4:-62393584 | None:intergenic |
TCAGACAGCAACTTCCAATG+AGG | 0.632178 | 7_4:+62390716 | Msa1169390:CDS |
TTGTCCAGGCTTATATAACC+AGG | 0.632877 | 7_4:+62393339 | Msa1169390:CDS |
ATCATAGCGTATCTGATTCG+GGG | 0.633177 | 7_4:+62389773 | Msa1169390:CDS |
GACAGCAACTTCCAATGAGG+GGG | 0.633635 | 7_4:+62390719 | Msa1169390:CDS |
TATCGGTAATAGTGCTTCCG+GGG | 0.633679 | 7_4:+62390209 | Msa1169390:CDS |
TATGTATCTTGATAATTCCG+GGG | 0.634354 | 7_4:+62389615 | Msa1169390:CDS |
GAAAGAAAGAATGAATGTGG+TGG | 0.636069 | 7_4:+62389378 | Msa1169390:exon |
GGTGAGTTATCTCCCATCAG+TGG | 0.640463 | 7_4:+62390498 | Msa1169390:CDS |
AGAATGGGTTATAATCAGAA+GGG | 0.641875 | 7_4:-62393879 | None:intergenic |
GAAGGGACTGATTTCTACGA+AGG | 0.643261 | 7_4:+62390084 | Msa1169390:CDS |
GGTTGATAAAGATGCATCAG+TGG | 0.645734 | 7_4:+62390575 | Msa1169390:CDS |
ACAGATTGAGAAAACGAATG+AGG | 0.646242 | 7_4:-62389012 | None:intergenic |
TCAGAGCTATAAATACTGGA+AGG | 0.646669 | 7_4:-62390186 | None:intergenic |
GTTCAAGCAAAGACGTAGGA+GGG | 0.648088 | 7_4:-62394163 | None:intergenic |
TGATTATAACCCATTCTATG+CGG | 0.650443 | 7_4:+62393885 | Msa1169390:CDS |
CCTGAAGATACAATTCCTGT+GGG | 0.650890 | 7_4:+62391098 | Msa1169390:CDS |
CACAGGAATTGTATCTTCAG+GGG | 0.660656 | 7_4:-62391096 | None:intergenic |
ACTGAAAGAAAGAATGAATG+TGG | 0.662863 | 7_4:+62389375 | Msa1169390:exon |
TGAACACTAATAGGGTGAGG+TGG | 0.663341 | 7_4:+62394076 | Msa1169390:intron |
CTTGCAGGGTTCTAATCCGG+AGG | 0.664062 | 7_4:+62389951 | Msa1169390:CDS |
AGACAGCAACTTCCAATGAG+GGG | 0.667001 | 7_4:+62390718 | Msa1169390:CDS |
TCATAGCGTATCTGATTCGG+GGG | 0.670402 | 7_4:+62389774 | Msa1169390:CDS |
AAGCCTTATCCCACTAAGTG+GGG | 0.671687 | 7_4:-62394463 | None:intergenic |
ACCACCAAAAGGGTGAAAAG+GGG | 0.671766 | 7_4:-62389446 | None:intergenic |
AGCACATCGAATATCTGCTG+AGG | 0.674065 | 7_4:+62390938 | Msa1169390:CDS |
GGTGAATCAAAACTCAGCGG+AGG | 0.674797 | 7_4:+62390407 | Msa1169390:CDS |
AGTTAGTAACACCTTCAACA+GGG | 0.677470 | 7_4:-62389693 | None:intergenic |
AGGAGACTCAAGCCTACCTG+AGG | 0.678173 | 7_4:-62391309 | None:intergenic |
TAGTGGTGATGAATCAAGTG+AGG | 0.678368 | 7_4:+62391232 | Msa1169390:CDS |
GTATCTTGATAATTCCGGGG+AGG | 0.679242 | 7_4:+62389618 | Msa1169390:CDS |
AGAATATGGAGAGAATGTTG+TGG | 0.680826 | 7_4:+62389927 | Msa1169390:CDS |
TGATTTCTACGAAGGCAATG+AGG | 0.683113 | 7_4:+62390092 | Msa1169390:CDS |
TAACATTCAGTTTCTCTACG+AGG | 0.686208 | 7_4:+62391411 | Msa1169390:CDS |
GACCATCTTCGTCTGGACGT+AGG | 0.688284 | 7_4:+62391159 | Msa1169390:CDS |
CTCAGAATTAGAGCCAACTG+AGG | 0.700989 | 7_4:+62390017 | Msa1169390:CDS |
AAAGGGACCTATTTGTCACA+CGG | 0.702150 | 7_4:+62390257 | Msa1169390:CDS |
AGCCATCTCCAACCTCAGGT+AGG | 0.703115 | 7_4:+62391297 | Msa1169390:CDS |
TGTAATTGTTTGGTATTGGG+CGG | 0.703952 | 7_4:+62394495 | Msa1169390:three_prime_UTR |
AGATTGGAACCAGACTGGGG+TGG | 0.726345 | 7_4:+62392342 | Msa1169390:CDS |
AAAAGATTGGAACCAGACTG+GGG | 0.727153 | 7_4:+62392339 | Msa1169390:CDS |
ACCTGTTCAAGCAAAGACGT+AGG | 0.741164 | 7_4:-62394167 | None:intergenic |
ATTGGTGAATCAAAACTCAG+CGG | 0.751587 | 7_4:+62390404 | Msa1169390:CDS |
GGGACCTATTTGTCACACGG+AGG | 0.770332 | 7_4:+62390260 | Msa1169390:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTAATTAAAAGTTTCTT+CGG | + | chr7_4:62389299-62389318 | Msa1169390:five_prime_UTR | 10.0% |
!! | ATTAAACAATTTAGAAATAT+TGG | + | chr7_4:62390477-62390496 | Msa1169390:CDS | 10.0% |
!!! | ATATTTGTTTTTTTCTTAAA+AGG | + | chr7_4:62392131-62392150 | Msa1169390:intron | 10.0% |
!!! | AATTTAAAATCAGAATTTCA+AGG | + | chr7_4:62390552-62390571 | Msa1169390:CDS | 15.0% |
!!! | ATTTAAAATCAGAATTTCAA+GGG | + | chr7_4:62390553-62390572 | Msa1169390:CDS | 15.0% |
!! | AAGAAAATCAAATAAACAAT+TGG | - | chr7_4:62390831-62390850 | None:intergenic | 15.0% |
!!! | TTTTTATTCTTAGTTATAGA+TGG | - | chr7_4:62390981-62391000 | None:intergenic | 15.0% |
!!! | GATTCATTTTATAAAATAAG+GGG | - | chr7_4:62391746-62391765 | None:intergenic | 15.0% |
!!! | GGATTCATTTTATAAAATAA+GGG | - | chr7_4:62391747-62391766 | None:intergenic | 15.0% |
!! | TTTACTTCATAAATGAAAAT+AGG | + | chr7_4:62391817-62391836 | Msa1169390:intron | 15.0% |
!! | TTACTTCATAAATGAAAATA+GGG | + | chr7_4:62391818-62391837 | Msa1169390:intron | 15.0% |
!! | ATAAAATTCAATGAAACAAT+AGG | - | chr7_4:62393236-62393255 | None:intergenic | 15.0% |
!!! | ATATTTTAACAATGATAACT+GGG | - | chr7_4:62393468-62393487 | None:intergenic | 15.0% |
!!! | AATATTTTAACAATGATAAC+TGG | - | chr7_4:62393469-62393488 | None:intergenic | 15.0% |
!!! | TTTTGTCTTATTTACTTATA+TGG | + | chr7_4:62393683-62393702 | Msa1169390:intron | 15.0% |
!!! | ATTGAATTGAATTTTGTTGT+GGG | - | chr7_4:62388915-62388934 | None:intergenic | 20.0% |
!!! | AATTGAATTGAATTTTGTTG+TGG | - | chr7_4:62388916-62388935 | None:intergenic | 20.0% |
!!! | TTTTTAAGTTGAATTTGACT+TGG | + | chr7_4:62389128-62389147 | Msa1169390:intron | 20.0% |
!! | ATTGTGAAGATAAATGTTAA+TGG | + | chr7_4:62389574-62389593 | Msa1169390:CDS | 20.0% |
!! | TTGTGAAGATAAATGTTAAT+GGG | + | chr7_4:62389575-62389594 | Msa1169390:CDS | 20.0% |
!!! | TTTAAAATCAGAATTTCAAG+GGG | + | chr7_4:62390554-62390573 | Msa1169390:CDS | 20.0% |
!!! | AATTGGCTTAATCAAATAAT+AGG | - | chr7_4:62390814-62390833 | None:intergenic | 20.0% |
!! | CAAAGTATATATAGTGATAT+GGG | - | chr7_4:62391482-62391501 | None:intergenic | 20.0% |
!!! | TGAACTTTTAATTTCATAAC+AGG | + | chr7_4:62391527-62391546 | Msa1169390:intron | 20.0% |
!! | TTGATGCTCATATATATTTA+TGG | + | chr7_4:62391550-62391569 | Msa1169390:CDS | 20.0% |
!!! | GGGATTCATTTTATAAAATA+AGG | - | chr7_4:62391748-62391767 | None:intergenic | 20.0% |
!!! | TTTGTCTTTTAGTAATCTTA+TGG | + | chr7_4:62391861-62391880 | Msa1169390:intron | 20.0% |
!!! | TCTTTTCAAAATTTAGACAA+AGG | - | chr7_4:62391984-62392003 | None:intergenic | 20.0% |
!!! | TTTTCTTCATTATCTTTTTC+TGG | + | chr7_4:62392008-62392027 | Msa1169390:intron | 20.0% |
!!! | TATGAATATGTGCATTTTTA+AGG | - | chr7_4:62392259-62392278 | None:intergenic | 20.0% |
!!! | CTTAATGGTATTCTTTTTTA+CGG | + | chr7_4:62392653-62392672 | Msa1169390:intron | 20.0% |
!!! | ATGATAAATATTTTTCCCTT+TGG | - | chr7_4:62393961-62393980 | None:intergenic | 20.0% |
!! | AATATTTATCATTAACCCTA+AGG | + | chr7_4:62393969-62393988 | Msa1169390:CDS | 20.0% |
!! | ACTTTCAAAACTAACAAATT+TGG | + | chr7_4:62394233-62394252 | Msa1169390:intron | 20.0% |
!!! | TTTCAGTTACATTTTTTACA+CGG | + | chr7_4:62394344-62394363 | Msa1169390:three_prime_UTR | 20.0% |
!! | GTTCTATCATAAAACATATT+TGG | - | chr7_4:62394413-62394432 | None:intergenic | 20.0% |
! | ATGTAGCAAAAAAAAGAAGA+AGG | - | chr7_4:62389044-62389063 | None:intergenic | 25.0% |
!! | AAGATTTAAGTAACGTTTTG+AGG | - | chr7_4:62389171-62389190 | None:intergenic | 25.0% |
! | TTGCAAGAAAAGAAAAGAAA+AGG | - | chr7_4:62389195-62389214 | None:intergenic | 25.0% |
!! | CTGAATTTCTTGATTAGTTA+CGG | - | chr7_4:62389231-62389250 | None:intergenic | 25.0% |
!! | AAATTCAGATAATCGATTCT+TGG | + | chr7_4:62389243-62389262 | Msa1169390:five_prime_UTR | 25.0% |
!! | AATTCAGATAATCGATTCTT+GGG | + | chr7_4:62389244-62389263 | Msa1169390:five_prime_UTR | 25.0% |
!! | TAGAAAAGTTCCAGAATTTT+GGG | - | chr7_4:62389338-62389357 | None:intergenic | 25.0% |
!! | ATAGAAAAGTTCCAGAATTT+TGG | - | chr7_4:62389339-62389358 | None:intergenic | 25.0% |
! | ATTTATCTTCACAATCTTCT+CGG | - | chr7_4:62389569-62389588 | None:intergenic | 25.0% |
! | TGTGAAGATAAATGTTAATG+GGG | + | chr7_4:62389576-62389595 | Msa1169390:CDS | 25.0% |
!! | CATATGTATCTTGATAATTC+CGG | + | chr7_4:62389613-62389632 | Msa1169390:CDS | 25.0% |
!! | ATATGTATCTTGATAATTCC+GGG | + | chr7_4:62389614-62389633 | Msa1169390:CDS | 25.0% |
!! | AGTGTTGAAATTGATATTAC+TGG | + | chr7_4:62389739-62389758 | Msa1169390:CDS | 25.0% |
!!! | AGTATTTATAGCTCTGATAT+CGG | + | chr7_4:62390192-62390211 | Msa1169390:CDS | 25.0% |
!! | ACTAATAATTTCAAGTACAG+TGG | - | chr7_4:62390673-62390692 | None:intergenic | 25.0% |
! | TGTACTTGAAATTATTAGTG+AGG | + | chr7_4:62390674-62390693 | Msa1169390:CDS | 25.0% |
! | CCAAAGTATATATAGTGATA+TGG | - | chr7_4:62391483-62391502 | None:intergenic | 25.0% |
! | CCATATCACTATATATACTT+TGG | + | chr7_4:62391480-62391499 | Msa1169390:intron | 25.0% |
! | CTCATATATATTTATGGAAG+TGG | + | chr7_4:62391556-62391575 | Msa1169390:CDS | 25.0% |
! | AAGAATTGTAATTTCAGATG+TGG | + | chr7_4:62391584-62391603 | Msa1169390:CDS | 25.0% |
! | TTATAAAATGAATCCCAGTT+TGG | + | chr7_4:62391752-62391771 | Msa1169390:intron | 25.0% |
! | AACAATTACTGAAATTTGCA+TGG | - | chr7_4:62391783-62391802 | None:intergenic | 25.0% |
! | TCATAAATGAAAATAGGGAA+AGG | + | chr7_4:62391823-62391842 | Msa1169390:intron | 25.0% |
! | CAACTAAATAGATACCTTAA+TGG | - | chr7_4:62392383-62392402 | None:intergenic | 25.0% |
! | TTGTCTCAAAACTGAAAATT+TGG | - | chr7_4:62392597-62392616 | None:intergenic | 25.0% |
! | TTAAGTTAACAGAAGTTGTT+TGG | - | chr7_4:62392638-62392657 | None:intergenic | 25.0% |
! | AACAACTTCTGTTAACTTAA+TGG | + | chr7_4:62392638-62392657 | Msa1169390:intron | 25.0% |
! | ATATATACACACACATTAAC+AGG | + | chr7_4:62392753-62392772 | Msa1169390:intron | 25.0% |
!! | GTAAAAGACTAGTTAGATAA+TGG | + | chr7_4:62392892-62392911 | Msa1169390:intron | 25.0% |
! | TAGTTGAATCTAAATTCTAC+AGG | - | chr7_4:62393137-62393156 | None:intergenic | 25.0% |
! | TTAGATTCAACTACATTTAG+TGG | + | chr7_4:62393144-62393163 | Msa1169390:intron | 25.0% |
!! | TTATATAACCAGGAACTTTT+TGG | + | chr7_4:62393349-62393368 | Msa1169390:CDS | 25.0% |
! | TTTGTTTAAATACCTGTTTC+AGG | - | chr7_4:62393379-62393398 | None:intergenic | 25.0% |
! | AACAGGTATTTAAACAAATC+TGG | + | chr7_4:62393381-62393400 | Msa1169390:intron | 25.0% |
!! | AAAATAAGAGTATGCATTAC+AGG | - | chr7_4:62393410-62393429 | None:intergenic | 25.0% |
! | AAAATATTGCATTACCTGAT+AGG | + | chr7_4:62393481-62393500 | Msa1169390:intron | 25.0% |
! | TACCATAACTATATATTTGC+AGG | + | chr7_4:62393508-62393527 | Msa1169390:intron | 25.0% |
! | ATCCTGCAAATATATAGTTA+TGG | - | chr7_4:62393513-62393532 | None:intergenic | 25.0% |
! | ATAACTATATATTTGCAGGA+TGG | + | chr7_4:62393512-62393531 | Msa1169390:intron | 25.0% |
!! | TTTTAATGAGAGAGCAATTA+AGG | + | chr7_4:62393612-62393631 | Msa1169390:intron | 25.0% |
! | GAACTTAGTTACAGTAAAAT+AGG | + | chr7_4:62393931-62393950 | Msa1169390:CDS | 25.0% |
! | AGTAAAATAGGAATTCCAAA+GGG | + | chr7_4:62393943-62393962 | Msa1169390:CDS | 25.0% |
!!! | TGGATTATTGTTATTTCTGA+CGG | + | chr7_4:62394005-62394024 | Msa1169390:intron | 25.0% |
! | ATATGCTTATGAACACTAAT+AGG | + | chr7_4:62394067-62394086 | Msa1169390:intron | 25.0% |
! | TATGCTTATGAACACTAATA+GGG | + | chr7_4:62394068-62394087 | Msa1169390:intron | 25.0% |
!!! | AGAAAGCATTTACAAAACAA+CGG | + | chr7_4:62394191-62394210 | Msa1169390:intron | 25.0% |
! | ACATAGAACTAATCAATATC+TGG | - | chr7_4:62394321-62394340 | None:intergenic | 25.0% |
! | TGGTATTAGGAAAAATTTAG+AGG | + | chr7_4:62394373-62394392 | Msa1169390:three_prime_UTR | 25.0% |
! | TTGTTGTAATTGTTTGGTAT+TGG | + | chr7_4:62394491-62394510 | Msa1169390:three_prime_UTR | 25.0% |
! | TGTTGTAATTGTTTGGTATT+GGG | + | chr7_4:62394492-62394511 | Msa1169390:three_prime_UTR | 25.0% |
!!! | TTTAAGTAACGTTTTGAGGA+TGG | - | chr7_4:62389167-62389186 | None:intergenic | 30.0% |
! | AAAAGTTTCTTCGGTCTTTT+TGG | + | chr7_4:62389308-62389327 | Msa1169390:five_prime_UTR | 30.0% |
ACTGAAAGAAAGAATGAATG+TGG | + | chr7_4:62389375-62389394 | Msa1169390:exon | 30.0% | |
AAAGAAAGAATGAATGTGGT+GGG | + | chr7_4:62389379-62389398 | Msa1169390:exon | 30.0% | |
! | ATTTGGAACCTTGATAACTA+AGG | + | chr7_4:62389405-62389424 | Msa1169390:CDS | 30.0% |
! | TTTGGAACCTTGATAACTAA+GGG | + | chr7_4:62389406-62389425 | Msa1169390:CDS | 30.0% |
ATAAACACCCTTAGTTATCA+AGG | - | chr7_4:62389416-62389435 | None:intergenic | 30.0% | |
! | GTAAGGTTTGGTAAATTTCA+AGG | + | chr7_4:62389529-62389548 | Msa1169390:CDS | 30.0% |
! | AAATTTCAAGGTGTTCTCAA+AGG | + | chr7_4:62389541-62389560 | Msa1169390:CDS | 30.0% |
! | TATGTATCTTGATAATTCCG+GGG | + | chr7_4:62389615-62389634 | Msa1169390:CDS | 30.0% |
TCAACCAACAATTGAAGATT+CGG | + | chr7_4:62389894-62389913 | Msa1169390:CDS | 30.0% | |
ACAAATTCCTCAATTTCACT+TGG | + | chr7_4:62390053-62390072 | Msa1169390:CDS | 30.0% | |
CAAATTCCTCAATTTCACTT+GGG | + | chr7_4:62390054-62390073 | Msa1169390:CDS | 30.0% | |
GATATCAGAGCTATAAATAC+TGG | - | chr7_4:62390193-62390212 | None:intergenic | 30.0% | |
! | AAATAGGTCCCTTTTCTATT+TGG | - | chr7_4:62390251-62390270 | None:intergenic | 30.0% |
ATGGCAATTTACAAGATGAA+AGG | + | chr7_4:62390376-62390395 | Msa1169390:CDS | 30.0% | |
GAATTTGATATCTCACTTTG+TGG | + | chr7_4:62390864-62390883 | Msa1169390:intron | 30.0% | |
TCTCAAAGATGGTCAAAATA+TGG | + | chr7_4:62391388-62391407 | Msa1169390:CDS | 30.0% | |
TATATAGTGATATGGGAACT+TGG | - | chr7_4:62391475-62391494 | None:intergenic | 30.0% | |
ATCACTATATATACTTTGGC+TGG | + | chr7_4:62391484-62391503 | Msa1169390:intron | 30.0% | |
TCAACCTGAAATAAGCAAAA+TGG | - | chr7_4:62391510-62391529 | None:intergenic | 30.0% | |
ATTGTAATTTCAGATGTGGA+TGG | + | chr7_4:62391588-62391607 | Msa1169390:CDS | 30.0% | |
! | ATTTTGTCGAGTTCAAAGAA+TGG | - | chr7_4:62391660-62391679 | None:intergenic | 30.0% |
AATAAGGGGTTAATTGAGTA+CGG | - | chr7_4:62391732-62391751 | None:intergenic | 30.0% | |
CAAACTAACGATGAATGTTT+AGG | - | chr7_4:62391930-62391949 | None:intergenic | 30.0% | |
AATTTAGACAAAGGATCACT+AGG | - | chr7_4:62391975-62391994 | None:intergenic | 30.0% | |
!! | TATCTTTTTCTGGCCATTTT+TGG | + | chr7_4:62392018-62392037 | Msa1169390:intron | 30.0% |
CAATCAAAGTAGATACTAGT+TGG | - | chr7_4:62392054-62392073 | None:intergenic | 30.0% | |
GTAATATGTTTGTGCATGTA+AGG | - | chr7_4:62392223-62392242 | None:intergenic | 30.0% | |
!! | GAATATGTGCATTTTTAAGG+AGG | - | chr7_4:62392256-62392275 | None:intergenic | 30.0% |
! | TTCCAATCTTTTCCAACTAA+AGG | - | chr7_4:62392331-62392350 | None:intergenic | 30.0% |
!! | CAAACAGTTGATGATGTAAA+TGG | + | chr7_4:62392449-62392468 | Msa1169390:intron | 30.0% |
AAATGGTAGAAGATATTTCG+AGG | + | chr7_4:62392466-62392485 | Msa1169390:intron | 30.0% | |
AATGGTAGAAGATATTTCGA+GGG | + | chr7_4:62392467-62392486 | Msa1169390:intron | 30.0% | |
! | ATTTAAAGCATCTTGTGTCT+TGG | + | chr7_4:62392497-62392516 | Msa1169390:intron | 30.0% |
TAATGAAATGGTAGCAACAA+AGG | - | chr7_4:62392539-62392558 | None:intergenic | 30.0% | |
GTGACAGAAACATAATGAAA+TGG | - | chr7_4:62392551-62392570 | None:intergenic | 30.0% | |
AAAATTTGGACCCCTAATTT+GGG | - | chr7_4:62392583-62392602 | None:intergenic | 30.0% | |
CTCTTTGCAGCTATATAATA+TGG | + | chr7_4:62392915-62392934 | Msa1169390:intron | 30.0% | |
TAAGTGTCCAAATAGAAACA+GGG | - | chr7_4:62393065-62393084 | None:intergenic | 30.0% | |
TTAAGTGTCCAAATAGAAAC+AGG | - | chr7_4:62393066-62393085 | None:intergenic | 30.0% | |
CACTTAATGCTTGTTTGATT+TGG | + | chr7_4:62393079-62393098 | Msa1169390:intron | 30.0% | |
GAATCTAAATTCTACAGGAA+TGG | - | chr7_4:62393132-62393151 | None:intergenic | 30.0% | |
! | TCCTGATTTTGTTAGGAAAA+TGG | + | chr7_4:62393284-62393303 | Msa1169390:intron | 30.0% |
! | TCCATTTTCCTAACAAAATC+AGG | - | chr7_4:62393288-62393307 | None:intergenic | 30.0% |
TGATATAAGGATTTGTGTCT+AGG | - | chr7_4:62393763-62393782 | None:intergenic | 30.0% | |
AGTTGCACATTAGTGATATA+AGG | - | chr7_4:62393776-62393795 | None:intergenic | 30.0% | |
CATTATTACCCAAACATGAA+AGG | - | chr7_4:62393834-62393853 | None:intergenic | 30.0% | |
! | TTTGGGTAATAATGTTTTGC+AGG | + | chr7_4:62393840-62393859 | Msa1169390:intron | 30.0% |
!! | AGAATGGGTTATAATCAGAA+GGG | - | chr7_4:62393882-62393901 | None:intergenic | 30.0% |
!! | TAGAATGGGTTATAATCAGA+AGG | - | chr7_4:62393883-62393902 | None:intergenic | 30.0% |
TGATTATAACCCATTCTATG+CGG | + | chr7_4:62393885-62393904 | Msa1169390:CDS | 30.0% | |
CAGTAAAATAGGAATTCCAA+AGG | + | chr7_4:62393942-62393961 | Msa1169390:CDS | 30.0% | |
!!! | GTATTTTCTTTAGTTCTCAC+AGG | + | chr7_4:62394031-62394050 | Msa1169390:intron | 30.0% |
!! | GAAAGCATTTACAAAACAAC+GGG | + | chr7_4:62394192-62394211 | Msa1169390:intron | 30.0% |
!! | TGGTTTGCAATTTTCATTTG+TGG | + | chr7_4:62394253-62394272 | Msa1169390:intron | 30.0% |
ACTTCAACTCTTGGAATTAT+TGG | + | chr7_4:62394283-62394302 | Msa1169390:CDS | 30.0% | |
AACTAATCAATATCTGGCAT+AGG | - | chr7_4:62394315-62394334 | None:intergenic | 30.0% | |
!!! | CATTTTTTACACGGATTCTT+TGG | + | chr7_4:62394353-62394372 | Msa1169390:three_prime_UTR | 30.0% |
! | TGGTTGTTGTTGTAATTGTT+TGG | + | chr7_4:62394485-62394504 | Msa1169390:three_prime_UTR | 30.0% |
! | TAGCATTTCCGTTAACATTT+TGG | - | chr7_4:62394525-62394544 | None:intergenic | 30.0% |
ACAGATTGAGAAAACGAATG+AGG | - | chr7_4:62389015-62389034 | None:intergenic | 35.0% | |
!!! | TTTTGGTTCTCCCAAAATTC+TGG | + | chr7_4:62389325-62389344 | Msa1169390:five_prime_UTR | 35.0% |
TCTTTCTTTCAGTAGTCAGA+GGG | - | chr7_4:62389368-62389387 | None:intergenic | 35.0% | |
TTCTTTCTTTCAGTAGTCAG+AGG | - | chr7_4:62389369-62389388 | None:intergenic | 35.0% | |
GAAAGAAAGAATGAATGTGG+TGG | + | chr7_4:62389378-62389397 | Msa1169390:exon | 35.0% | |
! | ATGAATGTGGTGGGAAAATT+TGG | + | chr7_4:62389388-62389407 | Msa1169390:CDS | 35.0% |
! | ATTGTTGTTCAGCAACAAGA+TGG | + | chr7_4:62389481-62389500 | Msa1169390:CDS | 35.0% |
! | AGCAACAAGATGGAACTTTT+CGG | + | chr7_4:62389491-62389510 | Msa1169390:CDS | 35.0% |
TTACCAAACCTTACATACCA+AGG | - | chr7_4:62389523-62389542 | None:intergenic | 35.0% | |
! | TTTTACAAAATAAGCCTCCC+CGG | - | chr7_4:62389635-62389654 | None:intergenic | 35.0% |
!!! | GGAGGCTTATTTTGTAAAAG+AGG | + | chr7_4:62389636-62389655 | Msa1169390:CDS | 35.0% |
!!! | GGCTTATTTTGTAAAAGAGG+TGG | + | chr7_4:62389639-62389658 | Msa1169390:CDS | 35.0% |
! | TTTTGTAAAAGAGGTGGATG+AGG | + | chr7_4:62389645-62389664 | Msa1169390:CDS | 35.0% |
AGTTAGTAACACCTTCAACA+GGG | - | chr7_4:62389696-62389715 | None:intergenic | 35.0% | |
! | TCTGAGTTTACTTCTGAAGA+CGG | + | chr7_4:62389715-62389734 | Msa1169390:CDS | 35.0% |
TGATCATAGCGTATCTGATT+CGG | + | chr7_4:62389771-62389790 | Msa1169390:CDS | 35.0% | |
! | AGTTTTGCCAGAACTTCAAA+AGG | + | chr7_4:62389828-62389847 | Msa1169390:CDS | 35.0% |
ATAAAATGTCCGACCAACAT+CGG | - | chr7_4:62389860-62389879 | None:intergenic | 35.0% | |
AGAATATGGAGAGAATGTTG+TGG | + | chr7_4:62389927-62389946 | Msa1169390:CDS | 35.0% | |
!! | TTGGCTCTAATTCTGAGATA+GGG | - | chr7_4:62390014-62390033 | None:intergenic | 35.0% |
! | GTGTTGCTGATTATGTTAGT+AGG | + | chr7_4:62390139-62390158 | Msa1169390:CDS | 35.0% |
TCAGAGCTATAAATACTGGA+AGG | - | chr7_4:62390189-62390208 | None:intergenic | 35.0% | |
GAAGGTTGCCAAATAGAAAA+GGG | + | chr7_4:62390240-62390259 | Msa1169390:CDS | 35.0% | |
! | GAGTGTTTTCAAAAGTTGCT+TGG | + | chr7_4:62390323-62390342 | Msa1169390:CDS | 35.0% |
!!! | TGAGTTTTGATTCACCAATG+AGG | - | chr7_4:62390403-62390422 | None:intergenic | 35.0% |
ATTGGTGAATCAAAACTCAG+CGG | + | chr7_4:62390404-62390423 | Msa1169390:CDS | 35.0% | |
!!! | AAGCCATTTTGGTTTGAGTA+AGG | + | chr7_4:62390746-62390765 | Msa1169390:intron | 35.0% |
AGTCCTTACTCAAACCAAAA+TGG | - | chr7_4:62390752-62390771 | None:intergenic | 35.0% | |
!! | TTCACTTTTCGAAAAGCAAG+AGG | - | chr7_4:62391197-62391216 | None:intergenic | 35.0% |
!! | GATTCCGAATCTGATTTGTT+TGG | + | chr7_4:62391266-62391285 | Msa1169390:CDS | 35.0% |
AGAGCCAAACAAATCAGATT+CGG | - | chr7_4:62391273-62391292 | None:intergenic | 35.0% | |
GATGCTATCATCTCATTAGA+GGG | - | chr7_4:62391362-62391381 | None:intergenic | 35.0% | |
TGATGCTATCATCTCATTAG+AGG | - | chr7_4:62391363-62391382 | None:intergenic | 35.0% | |
GCATCATTGAATCTCAAAGA+TGG | + | chr7_4:62391377-62391396 | Msa1169390:CDS | 35.0% | |
TAACATTCAGTTTCTCTACG+AGG | + | chr7_4:62391411-62391430 | Msa1169390:CDS | 35.0% | |
AACATTCAGTTTCTCTACGA+GGG | + | chr7_4:62391412-62391431 | Msa1169390:CDS | 35.0% | |
AAGGTAAAGAACGATAGCAA+TGG | - | chr7_4:62391692-62391711 | None:intergenic | 35.0% | |
AAAATAGGGAAAGGAAATGC+AGG | + | chr7_4:62391832-62391851 | Msa1169390:intron | 35.0% | |
TGGTTGATCTTCACCAAAAA+TGG | - | chr7_4:62392034-62392053 | None:intergenic | 35.0% | |
! | TGCTTTCAGATCTGATGTTT+TGG | + | chr7_4:62392294-62392313 | Msa1169390:intron | 35.0% |
! | GCTTTCAGATCTGATGTTTT+GGG | + | chr7_4:62392295-62392314 | Msa1169390:intron | 35.0% |
! | CTTTCAGATCTGATGTTTTG+GGG | + | chr7_4:62392296-62392315 | Msa1169390:intron | 35.0% |
TGCCTTTAGTTGGAAAAGAT+TGG | + | chr7_4:62392326-62392345 | Msa1169390:CDS | 35.0% | |
GAAAATTTGGACCCCTAATT+TGG | - | chr7_4:62392584-62392603 | None:intergenic | 35.0% | |
! | GAGTGATTTTTGCAAACACT+TGG | + | chr7_4:62392715-62392734 | Msa1169390:intron | 35.0% |
!!! | CAAGTCTGGTTTTTGCTTTA+TGG | + | chr7_4:62392849-62392868 | Msa1169390:intron | 35.0% |
!! | CATCTTTCCCTGTTTCTATT+TGG | + | chr7_4:62393055-62393074 | Msa1169390:intron | 35.0% |
! | TACCAGATCCTGATTTTGTT+AGG | + | chr7_4:62393277-62393296 | Msa1169390:intron | 35.0% |
TTCCTAACAAAATCAGGATC+TGG | - | chr7_4:62393282-62393301 | None:intergenic | 35.0% | |
!!! | CTTTTTGGTTAACCTGAAAC+AGG | + | chr7_4:62393364-62393383 | Msa1169390:CDS | 35.0% |
GATGGAAAAACCTTACCAAA+AGG | + | chr7_4:62393530-62393549 | Msa1169390:CDS | 35.0% | |
! | GAAATAACAACAGGTCCTTT+TGG | - | chr7_4:62393548-62393567 | None:intergenic | 35.0% |
TTAAAAGTTCCTGACCTTCT+CGG | - | chr7_4:62393598-62393617 | None:intergenic | 35.0% | |
TTACCAACACCTTTCATGTT+TGG | + | chr7_4:62393822-62393841 | Msa1169390:intron | 35.0% | |
TACCAACACCTTTCATGTTT+GGG | + | chr7_4:62393823-62393842 | Msa1169390:intron | 35.0% | |
GATTATAACCCATTCTATGC+GGG | + | chr7_4:62393886-62393905 | Msa1169390:CDS | 35.0% | |
ATTATAACCCATTCTATGCG+GGG | + | chr7_4:62393887-62393906 | Msa1169390:CDS | 35.0% | |
CATTATAGATGCAGACCTTA+GGG | - | chr7_4:62393987-62394006 | None:intergenic | 35.0% | |
TTATGAACACTAATAGGGTG+AGG | + | chr7_4:62394073-62394092 | Msa1169390:intron | 35.0% | |
! | TTGCAATTTTCATTTGTGGC+AGG | + | chr7_4:62394257-62394276 | Msa1169390:intron | 35.0% |
TACACGGATTCTTTGGTATT+AGG | + | chr7_4:62394360-62394379 | Msa1169390:three_prime_UTR | 35.0% | |
! | TGTAATTGTTTGGTATTGGG+CGG | + | chr7_4:62394495-62394514 | Msa1169390:three_prime_UTR | 35.0% |
TGCTATATGTTCGAACTACT+TGG | + | chr7_4:62394540-62394559 | Msa1169390:three_prime_UTR | 35.0% | |
! | AGTAAGTCACTTTACAAGCA+AGG | - | chr7_4:62394578-62394597 | None:intergenic | 35.0% |
TTAGGGGTTGGAATGGAATT+TGG | - | chr7_4:62388884-62388903 | None:intergenic | 40.0% | |
TTACAAGTTAGGGGTTGGAA+TGG | - | chr7_4:62388891-62388910 | None:intergenic | 40.0% | |
TGTTGTGGGCTTACAAGTTA+GGG | - | chr7_4:62388901-62388920 | None:intergenic | 40.0% | |
TTGTTGTGGGCTTACAAGTT+AGG | - | chr7_4:62388902-62388921 | None:intergenic | 40.0% | |
! | CTTTCTTGCAGTGCTTTGAA+TGG | - | chr7_4:62388953-62388972 | None:intergenic | 40.0% |
GAGTTAGTAACACCTTCAAC+AGG | - | chr7_4:62389697-62389716 | None:intergenic | 40.0% | |
GATCATAGCGTATCTGATTC+GGG | + | chr7_4:62389772-62389791 | Msa1169390:CDS | 40.0% | |
! | ATCATAGCGTATCTGATTCG+GGG | + | chr7_4:62389773-62389792 | Msa1169390:CDS | 40.0% |
TTTGCCAGAACTTCAAAAGG+TGG | + | chr7_4:62389831-62389850 | Msa1169390:CDS | 40.0% | |
!!! | GATTCCACCTTTTGAAGTTC+TGG | - | chr7_4:62389838-62389857 | None:intergenic | 40.0% |
TCAGCCGAATCTTCAATTGT+TGG | - | chr7_4:62389901-62389920 | None:intergenic | 40.0% | |
!! | TCGGCTGATTTGTCAGAATA+TGG | + | chr7_4:62389913-62389932 | Msa1169390:CDS | 40.0% |
!! | TGGCTCTAATTCTGAGATAG+GGG | - | chr7_4:62390013-62390032 | None:intergenic | 40.0% |
!! | GTTGGCTCTAATTCTGAGAT+AGG | - | chr7_4:62390015-62390034 | None:intergenic | 40.0% |
! | GACTGCAAATTTTCCTCAGT+TGG | - | chr7_4:62390033-62390052 | None:intergenic | 40.0% |
TGATTTCTACGAAGGCAATG+AGG | + | chr7_4:62390092-62390111 | Msa1169390:CDS | 40.0% | |
! | TGCTGATTATGTTAGTAGGC+CGG | + | chr7_4:62390143-62390162 | Msa1169390:CDS | 40.0% |
GATATCGGTAATAGTGCTTC+CGG | + | chr7_4:62390207-62390226 | Msa1169390:CDS | 40.0% | |
ATATCGGTAATAGTGCTTCC+GGG | + | chr7_4:62390208-62390227 | Msa1169390:CDS | 40.0% | |
CGAAGGTTGCCAAATAGAAA+AGG | + | chr7_4:62390239-62390258 | Msa1169390:CDS | 40.0% | |
AAAGGGACCTATTTGTCACA+CGG | + | chr7_4:62390257-62390276 | Msa1169390:CDS | 40.0% | |
AGCTGCATCATGCATGAATT+CGG | + | chr7_4:62390299-62390318 | Msa1169390:CDS | 40.0% | |
! | CTTAAATGAACTTGCTCAGC+AGG | + | chr7_4:62390347-62390366 | Msa1169390:CDS | 40.0% |
ACAAGATGAAAGGTCCTCAT+TGG | + | chr7_4:62390386-62390405 | Msa1169390:CDS | 40.0% | |
!! | GGTTGATAAAGATGCATCAG+TGG | + | chr7_4:62390575-62390594 | Msa1169390:CDS | 40.0% |
ACTTTGTGGTCACGAACTTA+AGG | + | chr7_4:62390878-62390897 | Msa1169390:CDS | 40.0% | |
TCAGAGAGAGTTATCTACCA+TGG | + | chr7_4:62391015-62391034 | Msa1169390:CDS | 40.0% | |
CAGAGAGAGTTATCTACCAT+GGG | + | chr7_4:62391016-62391035 | Msa1169390:CDS | 40.0% | |
GAGTTATCTACCATGGGAAA+AGG | + | chr7_4:62391022-62391041 | Msa1169390:CDS | 40.0% | |
CACAGGAATTGTATCTTCAG+GGG | - | chr7_4:62391099-62391118 | None:intergenic | 40.0% | |
CCACAGGAATTGTATCTTCA+GGG | - | chr7_4:62391100-62391119 | None:intergenic | 40.0% | |
CCTGAAGATACAATTCCTGT+GGG | + | chr7_4:62391098-62391117 | Msa1169390:CDS | 40.0% | |
! | TAGTGGTGATGAATCAAGTG+AGG | + | chr7_4:62391232-62391251 | Msa1169390:CDS | 40.0% |
! | TTCTAGGAACACAACAGGTT+TGG | + | chr7_4:62391435-62391454 | Msa1169390:intron | 40.0% |
!! | CTGGCCATTTTGCTTATTTC+AGG | + | chr7_4:62391503-62391522 | Msa1169390:intron | 40.0% |
! | GTACTGTCAGTAGTCTTACT+TGG | - | chr7_4:62391622-62391641 | None:intergenic | 40.0% |
GACTACTGACAGTACTTCTT+AGG | + | chr7_4:62391627-62391646 | Msa1169390:intron | 40.0% | |
TTGCATGGTATGTCCAAACT+GGG | - | chr7_4:62391768-62391787 | None:intergenic | 40.0% | |
TTTGCATGGTATGTCCAAAC+TGG | - | chr7_4:62391769-62391788 | None:intergenic | 40.0% | |
GAAAAGATTGGAACCAGACT+GGG | + | chr7_4:62392338-62392357 | Msa1169390:CDS | 40.0% | |
AAAAGATTGGAACCAGACTG+GGG | + | chr7_4:62392339-62392358 | Msa1169390:CDS | 40.0% | |
! | AAGGCTTTTCTCTGCCATTA+AGG | + | chr7_4:62392366-62392385 | Msa1169390:CDS | 40.0% |
ACAACGTGCTTCCCAAATTA+GGG | + | chr7_4:62392569-62392588 | Msa1169390:intron | 40.0% | |
CACACATTAACAGGTTTCCT+AGG | + | chr7_4:62392762-62392781 | Msa1169390:intron | 40.0% | |
! | AGGAACTTGCTTAAGTTCCT+AGG | - | chr7_4:62392782-62392801 | None:intergenic | 40.0% |
TAAGCAAGTTCCTTTGAGCT+TGG | + | chr7_4:62392789-62392808 | Msa1169390:intron | 40.0% | |
AAGCAAGTTCCTTTGAGCTT+GGG | + | chr7_4:62392790-62392809 | Msa1169390:intron | 40.0% | |
AATCTCAAACCCAAGCTCAA+AGG | - | chr7_4:62392802-62392821 | None:intergenic | 40.0% | |
ACGCAGTGAAGTCATTAAAG+AGG | - | chr7_4:62393031-62393050 | None:intergenic | 40.0% | |
TTCTACAGGAATGGTGTAGA+AGG | - | chr7_4:62393123-62393142 | None:intergenic | 40.0% | |
TATAAGCCTGGACAATAGCA+CGG | - | chr7_4:62393334-62393353 | None:intergenic | 40.0% | |
TTGTCCAGGCTTATATAACC+AGG | + | chr7_4:62393339-62393358 | Msa1169390:CDS | 40.0% | |
AGTTCCTGGTTATATAAGCC+TGG | - | chr7_4:62393346-62393365 | None:intergenic | 40.0% | |
CAGGTTAACCAAAAAGTTCC+TGG | - | chr7_4:62393360-62393379 | None:intergenic | 40.0% | |
AGTTATGGTATCAGCCTATC+AGG | - | chr7_4:62393498-62393517 | None:intergenic | 40.0% | |
! | AACAACAGGTCCTTTTGGTA+AGG | - | chr7_4:62393543-62393562 | None:intergenic | 40.0% |
CCATCAGGTGAAATAACAAC+AGG | - | chr7_4:62393557-62393576 | None:intergenic | 40.0% | |
!! | CCTGTTGTTATTTCACCTGA+TGG | + | chr7_4:62393554-62393573 | Msa1169390:CDS | 40.0% |
CAAGCAATCTTGAACTCATG+AGG | - | chr7_4:62393726-62393745 | None:intergenic | 40.0% | |
GTTCAAGATTGCTTGTCTAG+AGG | + | chr7_4:62393731-62393750 | Msa1169390:CDS | 40.0% | |
! | TACCCAAACATGAAAGGTGT+TGG | - | chr7_4:62393828-62393847 | None:intergenic | 40.0% |
CCATTATAGATGCAGACCTT+AGG | - | chr7_4:62393988-62394007 | None:intergenic | 40.0% | |
CCTAAGGTCTGCATCTATAA+TGG | + | chr7_4:62393985-62394004 | Msa1169390:intron | 40.0% | |
! | CAATTTTCATTTGTGGCAGG+AGG | + | chr7_4:62394260-62394279 | Msa1169390:intron | 40.0% |
GTTGTGGGCTTACAAGTTAG+GGG | - | chr7_4:62388900-62388919 | None:intergenic | 45.0% | |
ACCACCAAAAGGGTGAAAAG+GGG | - | chr7_4:62389449-62389468 | None:intergenic | 45.0% | |
CACCACCAAAAGGGTGAAAA+GGG | - | chr7_4:62389450-62389469 | None:intergenic | 45.0% | |
CATCAACAGCACCACCAAAA+GGG | - | chr7_4:62389459-62389478 | None:intergenic | 45.0% | |
ACATCAACAGCACCACCAAA+AGG | - | chr7_4:62389460-62389479 | None:intergenic | 45.0% | |
ACGCCTTGGTATGTAAGGTT+TGG | + | chr7_4:62389517-62389536 | Msa1169390:CDS | 45.0% | |
! | GTATCTTGATAATTCCGGGG+AGG | + | chr7_4:62389618-62389637 | Msa1169390:CDS | 45.0% |
GACTCAAATGTCCCTGTTGA+AGG | + | chr7_4:62389682-62389701 | Msa1169390:CDS | 45.0% | |
!! | TCATAGCGTATCTGATTCGG+GGG | + | chr7_4:62389774-62389793 | Msa1169390:CDS | 45.0% |
CAAAAGGTGGAATCCGATGT+TGG | + | chr7_4:62389844-62389863 | Msa1169390:CDS | 45.0% | |
AGAGAATGTTGTGGACTTGC+AGG | + | chr7_4:62389936-62389955 | Msa1169390:CDS | 45.0% | |
GAGAATGTTGTGGACTTGCA+GGG | + | chr7_4:62389937-62389956 | Msa1169390:CDS | 45.0% | |
TTCTAATCCGGAGGTGATCT+TGG | + | chr7_4:62389960-62389979 | Msa1169390:CDS | 45.0% | |
! | GTGATCTTGGTTAGCGTTGA+CGG | + | chr7_4:62389973-62389992 | Msa1169390:CDS | 45.0% |
CTCAGAATTAGAGCCAACTG+AGG | + | chr7_4:62390017-62390036 | Msa1169390:CDS | 45.0% | |
TAGAAATCAGTCCCTTCACC+TGG | - | chr7_4:62390081-62390100 | None:intergenic | 45.0% | |
! | GAAGGGACTGATTTCTACGA+AGG | + | chr7_4:62390084-62390103 | Msa1169390:CDS | 45.0% |
! | GGCAATGAGGAGTTTAGTTC+TGG | + | chr7_4:62390105-62390124 | Msa1169390:CDS | 45.0% |
! | ACATCAGCTGTTGAAGCATC+CGG | - | chr7_4:62390165-62390184 | None:intergenic | 45.0% |
TATCGGTAATAGTGCTTCCG+GGG | + | chr7_4:62390209-62390228 | Msa1169390:CDS | 45.0% | |
GTTTCCTCCGTGTGACAAAT+AGG | - | chr7_4:62390267-62390286 | None:intergenic | 45.0% | |
ATTTGTCACACGGAGGAAAC+TGG | + | chr7_4:62390267-62390286 | Msa1169390:CDS | 45.0% | |
CTTGCTCAGCAGGATGATTA+TGG | + | chr7_4:62390357-62390376 | Msa1169390:CDS | 45.0% | |
GAAGAAGTAGCACCACTGAT+GGG | - | chr7_4:62390513-62390532 | None:intergenic | 45.0% | |
TGAAGAAGTAGCACCACTGA+TGG | - | chr7_4:62390514-62390533 | None:intergenic | 45.0% | |
CCATTCCACATCATTCGTAC+CGG | - | chr7_4:62390628-62390647 | None:intergenic | 45.0% | |
TCATTGGAAGTTGCTGTCTG+AGG | - | chr7_4:62390717-62390736 | None:intergenic | 45.0% | |
TCAGACAGCAACTTCCAATG+AGG | + | chr7_4:62390716-62390735 | Msa1169390:CDS | 45.0% | |
CAGACAGCAACTTCCAATGA+GGG | + | chr7_4:62390717-62390736 | Msa1169390:CDS | 45.0% | |
AGACAGCAACTTCCAATGAG+GGG | + | chr7_4:62390718-62390737 | Msa1169390:CDS | 45.0% | |
TTGTGGTCACGAACTTAAGG+CGG | + | chr7_4:62390881-62390900 | Msa1169390:CDS | 45.0% | |
AGCACATCGAATATCTGCTG+AGG | + | chr7_4:62390938-62390957 | Msa1169390:CDS | 45.0% | |
ATTGTATCTTCAGGGGCAAC+AGG | - | chr7_4:62391092-62391111 | None:intergenic | 45.0% | |
CCCTGAAGATACAATTCCTG+TGG | + | chr7_4:62391097-62391116 | Msa1169390:CDS | 45.0% | |
CCCACAGGAATTGTATCTTC+AGG | - | chr7_4:62391101-62391120 | None:intergenic | 45.0% | |
TTCCTGTGGGTCAAGATGAT+AGG | + | chr7_4:62391111-62391130 | Msa1169390:CDS | 45.0% | |
AACCTATCATCTTGACCCAC+AGG | - | chr7_4:62391116-62391135 | None:intergenic | 45.0% | |
AAGTCCAGCGATGATAATCC+TGG | + | chr7_4:62391137-62391156 | Msa1169390:CDS | 45.0% | |
AAGACAGCTGAGCACAATAG+TGG | + | chr7_4:62391215-62391234 | Msa1169390:CDS | 45.0% | |
! | CTCCTCGCAAGCAATTTGTT+AGG | + | chr7_4:62391327-62391346 | Msa1169390:CDS | 45.0% |
GTCCTAACAAATTGCTTGCG+AGG | - | chr7_4:62391332-62391351 | None:intergenic | 45.0% | |
AGTTTCTCTACGAGGGTTCT+AGG | + | chr7_4:62391419-62391438 | Msa1169390:CDS | 45.0% | |
!! | GGAAGTGTTGAACAGGGATA+AGG | - | chr7_4:62391711-62391730 | None:intergenic | 45.0% |
!! | GAGTACGGAAGTGTTGAACA+GGG | - | chr7_4:62391717-62391736 | None:intergenic | 45.0% |
!! | TGAGTACGGAAGTGTTGAAC+AGG | - | chr7_4:62391718-62391737 | None:intergenic | 45.0% |
GGAAAAGATTGGAACCAGAC+TGG | + | chr7_4:62392337-62392356 | Msa1169390:CDS | 45.0% | |
CACAACGTGCTTCCCAAATT+AGG | + | chr7_4:62392568-62392587 | Msa1169390:intron | 45.0% | |
CAACGTGCTTCCCAAATTAG+GGG | + | chr7_4:62392570-62392589 | Msa1169390:intron | 45.0% | |
!! | CTAGAAGTGCTTGTTGCATC+TGG | + | chr7_4:62392693-62392712 | Msa1169390:intron | 45.0% |
TAGAGAGTGAGCTTAAAGCC+TGG | + | chr7_4:62392825-62392844 | Msa1169390:intron | 45.0% | |
AGCAAAAACCAGACTTGACC+AGG | - | chr7_4:62392846-62392865 | None:intergenic | 45.0% | |
ATAAGCCTGGACAATAGCAC+GGG | - | chr7_4:62393333-62393352 | None:intergenic | 45.0% | |
AGGGACGGAAATAATCCATC+AGG | - | chr7_4:62393572-62393591 | None:intergenic | 45.0% | |
TTCCTGACCTTCTCGGTAAA+GGG | - | chr7_4:62393591-62393610 | None:intergenic | 45.0% | |
TGAACACTAATAGGGTGAGG+TGG | + | chr7_4:62394076-62394095 | Msa1169390:intron | 45.0% | |
GTTCAAGCAAAGACGTAGGA+GGG | - | chr7_4:62394166-62394185 | None:intergenic | 45.0% | |
TGTTCAAGCAAAGACGTAGG+AGG | - | chr7_4:62394167-62394186 | None:intergenic | 45.0% | |
TCCTACGTCTTTGCTTGAAC+AGG | + | chr7_4:62394166-62394185 | Msa1169390:CDS | 45.0% | |
ACCTGTTCAAGCAAAGACGT+AGG | - | chr7_4:62394170-62394189 | None:intergenic | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr7_4:62394466-62394485 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr7_4:62394467-62394486 | None:intergenic | 45.0% |
GCGGCTGTCCAAAATGTTAA+CGG | + | chr7_4:62394514-62394533 | Msa1169390:three_prime_UTR | 45.0% | |
TGGGCTTACAAGTTAGGGGT+TGG | - | chr7_4:62388896-62388915 | None:intergenic | 50.0% | |
! | GCTACCCCTTTTCACCCTTT+TGG | + | chr7_4:62389442-62389461 | Msa1169390:CDS | 50.0% |
! | ACCCCTTTTCACCCTTTTGG+TGG | + | chr7_4:62389445-62389464 | Msa1169390:CDS | 50.0% |
GCACCACCAAAAGGGTGAAA+AGG | - | chr7_4:62389451-62389470 | None:intergenic | 50.0% | |
AGGTGGAATCCGATGTTGGT+CGG | + | chr7_4:62389848-62389867 | Msa1169390:CDS | 50.0% | |
! | GGACTTGCAGGGTTCTAATC+CGG | + | chr7_4:62389948-62389967 | Msa1169390:CDS | 50.0% |
ACGCTAACCAAGATCACCTC+CGG | - | chr7_4:62389970-62389989 | None:intergenic | 50.0% | |
CCTGGTCCCAAGTGAAATTG+AGG | - | chr7_4:62390063-62390082 | None:intergenic | 50.0% | |
CCTCAATTTCACTTGGGACC+AGG | + | chr7_4:62390060-62390079 | Msa1169390:CDS | 50.0% | |
TTTCACTTGGGACCAGGTGA+AGG | + | chr7_4:62390066-62390085 | Msa1169390:CDS | 50.0% | |
TTCACTTGGGACCAGGTGAA+GGG | + | chr7_4:62390067-62390086 | Msa1169390:CDS | 50.0% | |
CTATTTGGCAACCTTCGAGC+TGG | - | chr7_4:62390236-62390255 | None:intergenic | 50.0% | |
GGTGAATCAAAACTCAGCGG+AGG | + | chr7_4:62390407-62390426 | Msa1169390:CDS | 50.0% | |
GGTGAGTTATCTCCCATCAG+TGG | + | chr7_4:62390498-62390517 | Msa1169390:CDS | 50.0% | |
GCATCAGTGGAAGTTGACAC+TGG | + | chr7_4:62390588-62390607 | Msa1169390:CDS | 50.0% | |
!! | GTGGAAGTTGACACTGGTTC+TGG | + | chr7_4:62390594-62390613 | Msa1169390:CDS | 50.0% |
!! | ACTGGTTCTGGCATTCGTTC+CGG | + | chr7_4:62390606-62390625 | Msa1169390:CDS | 50.0% |
TCGTTCCGGTACGAATGATG+TGG | + | chr7_4:62390620-62390639 | Msa1169390:CDS | 50.0% | |
CCGGTACGAATGATGTGGAA+TGG | + | chr7_4:62390625-62390644 | Msa1169390:CDS | 50.0% | |
GACAGCAACTTCCAATGAGG+GGG | + | chr7_4:62390719-62390738 | Msa1169390:CDS | 50.0% | |
!! | ATGGCTTTGATCCCCCTCAT+TGG | - | chr7_4:62390733-62390752 | None:intergenic | 50.0% |
! | GAGGGGGATCAAAGCCATTT+TGG | + | chr7_4:62390735-62390754 | Msa1169390:CDS | 50.0% |
TGTGGTCACGAACTTAAGGC+GGG | + | chr7_4:62390882-62390901 | Msa1169390:CDS | 50.0% | |
TCACGAACTTAAGGCGGGTA+TGG | + | chr7_4:62390887-62390906 | Msa1169390:CDS | 50.0% | |
CACGAACTTAAGGCGGGTAT+GGG | + | chr7_4:62390888-62390907 | Msa1169390:CDS | 50.0% | |
TGGTCCAGGATTATCATCGC+TGG | - | chr7_4:62391144-62391163 | None:intergenic | 50.0% | |
AATCCTGGACCATCTTCGTC+TGG | + | chr7_4:62391152-62391171 | Msa1169390:CDS | 50.0% | |
!! | GAGGGTTCTAGGAACACAAC+AGG | + | chr7_4:62391430-62391449 | Msa1169390:CDS | 50.0% |
GGGAAAGGAAATGCAGGTTC+TGG | + | chr7_4:62391838-62391857 | Msa1169390:intron | 50.0% | |
GGGCAGTTCATGCCTTTAGT+TGG | + | chr7_4:62392316-62392335 | Msa1169390:CDS | 50.0% | |
GCTTAAAGCCTGGTCAAGTC+TGG | + | chr7_4:62392835-62392854 | Msa1169390:intron | 50.0% | |
GGGCACTCAAAAACAGTAGC+TGG | - | chr7_4:62393313-62393332 | None:intergenic | 50.0% | |
TTTCCGTCCCTTTACCGAGA+AGG | + | chr7_4:62393581-62393600 | Msa1169390:CDS | 50.0% | |
TGACCTTCTCGGTAAAGGGA+CGG | - | chr7_4:62393587-62393606 | None:intergenic | 50.0% | |
GTTCCTGACCTTCTCGGTAA+AGG | - | chr7_4:62393592-62393611 | None:intergenic | 50.0% | |
AACCCATTCTATGCGGGGTT+TGG | + | chr7_4:62393892-62393911 | Msa1169390:CDS | 50.0% | |
TGCCAAACCCCGCATAGAAT+GGG | - | chr7_4:62393897-62393916 | None:intergenic | 50.0% | |
TTGCCAAACCCCGCATAGAA+TGG | - | chr7_4:62393898-62393917 | None:intergenic | 50.0% | |
ATGTAGCCAACCCCACTTAG+TGG | + | chr7_4:62394453-62394472 | Msa1169390:three_prime_UTR | 50.0% | |
TGTAGCCAACCCCACTTAGT+GGG | + | chr7_4:62394454-62394473 | Msa1169390:three_prime_UTR | 50.0% | |
CTTATCCCACTAAGTGGGGT+TGG | - | chr7_4:62394462-62394481 | None:intergenic | 50.0% | |
CAACCCCACTTAGTGGGATA+AGG | + | chr7_4:62394460-62394479 | Msa1169390:three_prime_UTR | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr7_4:62394468-62394487 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | chr7_4:62394465-62394484 | Msa1169390:three_prime_UTR | 50.0% | |
! | GAACTTTTCGGAGCACGCCT+TGG | + | chr7_4:62389503-62389522 | Msa1169390:CDS | 55.0% |
GGAGCACGCCTTGGTATGTA+AGG | + | chr7_4:62389512-62389531 | Msa1169390:CDS | 55.0% | |
TCGGGGGCAATTCAGTTGAC+AGG | + | chr7_4:62389790-62389809 | Msa1169390:CDS | 55.0% | |
! | CTTGCAGGGTTCTAATCCGG+AGG | + | chr7_4:62389951-62389970 | Msa1169390:CDS | 55.0% |
GGGACCTATTTGTCACACGG+AGG | + | chr7_4:62390260-62390279 | Msa1169390:CDS | 55.0% | |
CACTCCAAGAACAAGAGGGG+CGG | - | chr7_4:62391048-62391067 | None:intergenic | 55.0% | |
CGCCACTCCAAGAACAAGAG+GGG | - | chr7_4:62391051-62391070 | None:intergenic | 55.0% | |
CCGCCACTCCAAGAACAAGA+GGG | - | chr7_4:62391052-62391071 | None:intergenic | 55.0% | |
CCCTCTTGTTCTTGGAGTGG+CGG | + | chr7_4:62391049-62391068 | Msa1169390:CDS | 55.0% | |
GACCATCTTCGTCTGGACGT+AGG | + | chr7_4:62391159-62391178 | Msa1169390:CDS | 55.0% | |
CACCTACGTCCAGACGAAGA+TGG | - | chr7_4:62391164-62391183 | None:intergenic | 55.0% | |
CATCTTCGTCTGGACGTAGG+TGG | + | chr7_4:62391162-62391181 | Msa1169390:CDS | 55.0% | |
GTTGAGCCATCTCCAACCTC+AGG | + | chr7_4:62391293-62391312 | Msa1169390:CDS | 55.0% | |
AGCCATCTCCAACCTCAGGT+AGG | + | chr7_4:62391297-62391316 | Msa1169390:CDS | 55.0% | |
AGCCTACCTGAGGTTGGAGA+TGG | - | chr7_4:62391302-62391321 | None:intergenic | 55.0% | |
GACTCAAGCCTACCTGAGGT+TGG | - | chr7_4:62391308-62391327 | None:intergenic | 55.0% | |
AGGAGACTCAAGCCTACCTG+AGG | - | chr7_4:62391312-62391331 | None:intergenic | 55.0% | |
AGATTGGAACCAGACTGGGG+TGG | + | chr7_4:62392342-62392361 | Msa1169390:CDS | 55.0% | |
GTCCCTTTACCGAGAAGGTC+AGG | + | chr7_4:62393586-62393605 | Msa1169390:intron | 55.0% | |
GGCAGGAGGACTTCAACTCT+TGG | + | chr7_4:62394274-62394293 | Msa1169390:intron | 55.0% | |
AAGGCCGCCCCTCTTGTTCT+TGG | + | chr7_4:62391041-62391060 | Msa1169390:CDS | 60.0% | |
CGCCCCTCTTGTTCTTGGAG+TGG | + | chr7_4:62391046-62391065 | Msa1169390:CDS | 60.0% | |
GCCGCCACTCCAAGAACAAG+AGG | - | chr7_4:62391053-62391072 | None:intergenic | 60.0% | |
CGTCCAGACGAAGATGGTCC+AGG | - | chr7_4:62391158-62391177 | None:intergenic | 60.0% | |
CTGGACGTAGGTGGAGACTC+TGG | + | chr7_4:62391171-62391190 | Msa1169390:CDS | 60.0% | |
AAAGCCTTGCCACCCCAGTC+TGG | - | chr7_4:62392354-62392373 | None:intergenic | 60.0% | |
! | GAGTGCCCGTGCTATTGTCC+AGG | + | chr7_4:62393325-62393344 | Msa1169390:CDS | 60.0% |
GCAACCTTCGAGCTGGACCC+CGG | - | chr7_4:62390229-62390248 | None:intergenic | 65.0% | |
! | AGAGGGGCGGCCTTTTCCCA+TGG | - | chr7_4:62391035-62391054 | None:intergenic | 65.0% |
GGAACCAGACTGGGGTGGCA+AGG | + | chr7_4:62392347-62392366 | Msa1169390:CDS | 65.0% | |
GCTTCCGGGGTCCAGCTCGA+AGG | + | chr7_4:62390222-62390241 | Msa1169390:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 62388812 | 62394625 | 62388812 | ID=Msa1169390;Name=Msa1169390 |
chr7_4 | mRNA | 62388812 | 62394625 | 62388812 | ID=Msa1169390-mRNA-1;Parent=Msa1169390;Name=Msa1169390-mRNA-1;_AED=0.08;_eAED=0.08;_QI=393|1|1|1|0.9|0.81|11|293|868 |
chr7_4 | exon | 62388812 | 62389032 | 62388812 | ID=Msa1169390-mRNA-1:exon:19760;Parent=Msa1169390-mRNA-1 |
chr7_4 | exon | 62389216 | 62390762 | 62389216 | ID=Msa1169390-mRNA-1:exon:19761;Parent=Msa1169390-mRNA-1 |
chr7_4 | exon | 62390865 | 62391451 | 62390865 | ID=Msa1169390-mRNA-1:exon:19762;Parent=Msa1169390-mRNA-1 |
chr7_4 | exon | 62391549 | 62391622 | 62391549 | ID=Msa1169390-mRNA-1:exon:19763;Parent=Msa1169390-mRNA-1 |
chr7_4 | exon | 62392303 | 62392387 | 62392303 | ID=Msa1169390-mRNA-1:exon:19764;Parent=Msa1169390-mRNA-1 |
chr7_4 | exon | 62393299 | 62393385 | 62393299 | ID=Msa1169390-mRNA-1:exon:19765;Parent=Msa1169390-mRNA-1 |
chr7_4 | exon | 62393530 | 62393602 | 62393530 | ID=Msa1169390-mRNA-1:exon:19766;Parent=Msa1169390-mRNA-1 |
chr7_4 | exon | 62393709 | 62393752 | 62393709 | ID=Msa1169390-mRNA-1:exon:19767;Parent=Msa1169390-mRNA-1 |
chr7_4 | exon | 62393862 | 62393990 | 62393862 | ID=Msa1169390-mRNA-1:exon:19768;Parent=Msa1169390-mRNA-1 |
chr7_4 | exon | 62394089 | 62394187 | 62394089 | ID=Msa1169390-mRNA-1:exon:19769;Parent=Msa1169390-mRNA-1 |
chr7_4 | exon | 62394279 | 62394625 | 62394279 | ID=Msa1169390-mRNA-1:exon:19770;Parent=Msa1169390-mRNA-1 |
chr7_4 | five_prime_UTR | 62388812 | 62389032 | 62388812 | ID=Msa1169390-mRNA-1:five_prime_utr;Parent=Msa1169390-mRNA-1 |
chr7_4 | five_prime_UTR | 62389216 | 62389387 | 62389216 | ID=Msa1169390-mRNA-1:five_prime_utr;Parent=Msa1169390-mRNA-1 |
chr7_4 | CDS | 62389388 | 62390762 | 62389388 | ID=Msa1169390-mRNA-1:cds;Parent=Msa1169390-mRNA-1 |
chr7_4 | CDS | 62390865 | 62391451 | 62390865 | ID=Msa1169390-mRNA-1:cds;Parent=Msa1169390-mRNA-1 |
chr7_4 | CDS | 62391549 | 62391622 | 62391549 | ID=Msa1169390-mRNA-1:cds;Parent=Msa1169390-mRNA-1 |
chr7_4 | CDS | 62392303 | 62392387 | 62392303 | ID=Msa1169390-mRNA-1:cds;Parent=Msa1169390-mRNA-1 |
chr7_4 | CDS | 62393299 | 62393385 | 62393299 | ID=Msa1169390-mRNA-1:cds;Parent=Msa1169390-mRNA-1 |
chr7_4 | CDS | 62393530 | 62393602 | 62393530 | ID=Msa1169390-mRNA-1:cds;Parent=Msa1169390-mRNA-1 |
chr7_4 | CDS | 62393709 | 62393752 | 62393709 | ID=Msa1169390-mRNA-1:cds;Parent=Msa1169390-mRNA-1 |
chr7_4 | CDS | 62393862 | 62393990 | 62393862 | ID=Msa1169390-mRNA-1:cds;Parent=Msa1169390-mRNA-1 |
chr7_4 | CDS | 62394089 | 62394187 | 62394089 | ID=Msa1169390-mRNA-1:cds;Parent=Msa1169390-mRNA-1 |
chr7_4 | CDS | 62394279 | 62394332 | 62394279 | ID=Msa1169390-mRNA-1:cds;Parent=Msa1169390-mRNA-1 |
chr7_4 | three_prime_UTR | 62394333 | 62394625 | 62394333 | ID=Msa1169390-mRNA-1:three_prime_utr;Parent=Msa1169390-mRNA-1 |
Gene Sequence |
Protein sequence |