AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1078670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1078670 MtrunA17_Chr7g0263401 96.429 868 30 1 1 868 1 867 0.0 1711
Msa1078670 MtrunA17_Chr1g0181991 61.257 955 253 21 1 868 1 925 0.0 1061
Msa1078670 MtrunA17_Chr3g0133821 66.561 314 87 3 559 863 523 827 2.84e-139 434
Msa1078670 MtrunA17_Chr3g0133821 70.526 95 28 0 1 95 1 95 9.61e-40 158
Msa1078670 MtrunA17_Chr1g0153651 74.219 256 64 2 609 863 261 515 2.35e-132 405
Msa1078670 MtrunA17_Chr1g0153651 58.242 91 35 2 1 88 1 91 6.24e-26 113
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1078670 AT3G09560.3 53.326 932 343 21 1 868 1 904 0.0 893
Msa1078670 AT3G09560.1 53.326 932 343 21 1 868 1 904 0.0 893
Msa1078670 AT3G09560.2 53.326 932 343 21 1 868 1 904 0.0 893
Msa1078670 AT3G09560.4 53.326 932 343 21 1 868 1 904 0.0 893
Msa1078670 AT5G42870.1 58.354 413 142 7 461 867 541 929 2.60e-160 492
Msa1078670 AT5G42870.1 60.215 93 37 0 1 93 1 93 2.00e-33 139
Msa1078670 AT5G42870.2 57.385 413 141 8 461 867 541 924 1.12e-154 477
Msa1078670 AT5G42870.2 60.215 93 37 0 1 93 1 93 1.82e-33 139
Msa1078670 AT5G42870.3 57.692 364 124 7 461 818 541 880 1.40e-133 421
Msa1078670 AT5G42870.3 60.215 93 37 0 1 93 1 93 1.61e-33 139

Find 246 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGAAAAGTTCCAGAATTT+TGG 0.130476 7_2:-77675854 None:intergenic
TAGCATTTCCGTTAACATTT+TGG 0.146903 7_2:-77681025 None:intergenic
GTTCTATCATAAAACATATT+TGG 0.187069 7_2:-77680918 None:intergenic
TGCTTTCAGATCTGATGTTT+TGG 0.192008 7_2:+77678812 Msa1078670:intron
ACTTCAACTCTTGGAATTAT+TGG 0.208357 7_2:+77680791 Msa1078670:CDS
TTAGGGGTTGGAATGGAATT+TGG 0.209118 7_2:-77675390 None:intergenic
TTGATGCTCATATATATTTA+TGG 0.222189 7_2:+77678068 Msa1078670:CDS
ATTAAACAATTTAGAAATAT+TGG 0.228590 7_2:+77676995 Msa1078670:CDS
ATGAATGTGGTGGGAAAATT+TGG 0.229388 7_2:+77675906 Msa1078670:CDS
TTTGTTTAAATACCTGTTTC+AGG 0.232511 7_2:-77679896 None:intergenic
CATATGTATCTTGATAATTC+CGG 0.248335 7_2:+77676131 Msa1078670:CDS
TACACGGATTCTTTGGTATT+AGG 0.256009 7_2:+77680868 Msa1078670:three_prime_UTR
TCGGCTGATTTGTCAGAATA+TGG 0.264818 7_2:+77676431 Msa1078670:CDS
CCCTGATGAGGTTGAAATTC+TGG 0.275882 7_2:+77675310 None:intergenic
GAACTTAGTTACAGTAAAAT+AGG 0.277495 7_2:+77680439 Msa1078670:CDS
AGTTTCTCTACGAGGGTTCT+AGG 0.286566 7_2:+77677937 Msa1078670:CDS
TTGTTGTGGGCTTACAAGTT+AGG 0.289505 7_2:-77675408 None:intergenic
AGTCCTTACTCAAACCAAAA+TGG 0.312761 7_2:-77677267 None:intergenic
TCTCAAAGATGGTCAAAATA+TGG 0.321607 7_2:+77677906 Msa1078670:CDS
CAACTAAATAGATACCTTAA+TGG 0.323620 7_2:-77678898 None:intergenic
TTGTGAAGATAAATGTTAAT+GGG 0.325693 7_2:+77676093 Msa1078670:CDS
CTTTCTTGCAGTGCTTTGAA+TGG 0.327500 7_2:-77675459 None:intergenic
TTGTTGTAATTGTTTGGTAT+TGG 0.329286 7_2:+77680994 Msa1078670:three_prime_UTR
AGTGTTGAAATTGATATTAC+TGG 0.332390 7_2:+77676257 Msa1078670:CDS
AAGGCCGCCCCTCTTGTTCT+TGG 0.341180 7_2:+77677559 Msa1078670:CDS
TGCCTTTAGTTGGAAAAGAT+TGG 0.344724 7_2:+77678844 Msa1078670:CDS
TGTTGTAATTGTTTGGTATT+GGG 0.346409 7_2:+77680995 Msa1078670:three_prime_UTR
AACCCATTCTATGCGGGGTT+TGG 0.347079 7_2:+77680400 Msa1078670:CDS
CTTGCTCAGCAGGATGATTA+TGG 0.349602 7_2:+77676875 Msa1078670:CDS
GATTCCGAATCTGATTTGTT+TGG 0.352962 7_2:+77677784 Msa1078670:CDS
GATCATAGCGTATCTGATTC+GGG 0.353087 7_2:+77676290 Msa1078670:CDS
GAGGTTGAAATTCTGGTATT+AGG 0.354716 7_2:+77675317 None:intergenic
TGTTGTGGGCTTACAAGTTA+GGG 0.358566 7_2:-77675407 None:intergenic
GATATCGGTAATAGTGCTTC+CGG 0.358681 7_2:+77676725 Msa1078670:CDS
GAAATAACAACAGGTCCTTT+TGG 0.363480 7_2:-77680065 None:intergenic
TTAAAAGTTCCTGACCTTCT+CGG 0.364505 7_2:-77680115 None:intergenic
AAATTCAGATAATCGATTCT+TGG 0.365245 7_2:+77675765 Msa1078670:five_prime_UTR
ATATGTATCTTGATAATTCC+GGG 0.366297 7_2:+77676132 Msa1078670:CDS
ATTTATCTTCACAATCTTCT+CGG 0.372459 7_2:-77676084 None:intergenic
GGCAATGAGGAGTTTAGTTC+TGG 0.375234 7_2:+77676623 Msa1078670:CDS
CTGAATTTCTTGATTAGTTA+CGG 0.377236 7_2:-77675750 None:intergenic
ATTGTGAAGATAAATGTTAA+TGG 0.378629 7_2:+77676092 Msa1078670:CDS
TGATCATAGCGTATCTGATT+CGG 0.384025 7_2:+77676289 Msa1078670:CDS
TGATGCTATCATCTCATTAG+AGG 0.387912 7_2:-77677878 None:intergenic
GTGGAAGTTGACACTGGTTC+TGG 0.389318 7_2:+77677112 Msa1078670:CDS
CCCACAGGAATTGTATCTTC+AGG 0.392472 7_2:-77677616 None:intergenic
ACATAGAACTAATCAATATC+TGG 0.393486 7_2:-77680826 None:intergenic
ATTTGTCACACGGAGGAAAC+TGG 0.394153 7_2:+77676785 Msa1078670:CDS
GATATCAGAGCTATAAATAC+TGG 0.396300 7_2:-77676708 None:intergenic
GAATTTGATATCTCACTTTG+TGG 0.396349 7_2:+77677382 Msa1078670:intron
GTTGGCTCTAATTCTGAGAT+AGG 0.398990 7_2:-77676530 None:intergenic
GTTTCCTCCGTGTGACAAAT+AGG 0.403271 7_2:-77676782 None:intergenic
GAGTTAGTAACACCTTCAAC+AGG 0.404417 7_2:-77676212 None:intergenic
GTAAGGTTTGGTAAATTTCA+AGG 0.404862 7_2:+77676047 Msa1078670:CDS
TTCTAATCCGGAGGTGATCT+TGG 0.405144 7_2:+77676478 Msa1078670:CDS
AATTCAGATAATCGATTCTT+GGG 0.407555 7_2:+77675766 Msa1078670:five_prime_UTR
TCCTACGTCTTTGCTTGAAC+AGG 0.407811 7_2:+77680674 Msa1078670:CDS
ACTTTGTGGTCACGAACTTA+AGG 0.409783 7_2:+77677396 Msa1078670:CDS
CACCACCAAAAGGGTGAAAA+GGG 0.410706 7_2:-77675965 None:intergenic
TTGCCAAACCCCGCATAGAA+TGG 0.414444 7_2:-77680403 None:intergenic
CTATTAATTAAAAGTTTCTT+CGG 0.414606 7_2:+77675817 Msa1078670:five_prime_UTR
AGGCTGTTGTTGTAATTGTT+TGG 0.416399 7_2:+77680988 Msa1078670:three_prime_UTR
AGTATTTATAGCTCTGATAT+CGG 0.417244 7_2:+77676710 Msa1078670:CDS
ATATCGGTAATAGTGCTTCC+GGG 0.417611 7_2:+77676726 Msa1078670:CDS
ATTTGGAACCTTGATAACTA+AGG 0.420387 7_2:+77675923 Msa1078670:CDS
AGAGAATGTTGTGGACTTGC+AGG 0.425386 7_2:+77676454 Msa1078670:CDS
TCACGAACTTAAGGCGGGTA+TGG 0.425429 7_2:+77677405 Msa1078670:CDS
AGCTGCATCATGCATGAATT+CGG 0.430128 7_2:+77676817 Msa1078670:CDS
GAGTGCCCGTGCTATTGTCC+AGG 0.431287 7_2:+77679845 Msa1078670:CDS
CTTAAATGAACTTGCTCAGC+AGG 0.432746 7_2:+77676865 Msa1078670:CDS
GGCAGGAGGACTTCAACTCT+TGG 0.432981 7_2:+77680782 Msa1078670:intron
CTCATATATATTTATGGAAG+TGG 0.433128 7_2:+77678074 Msa1078670:CDS
GCACCACCAAAAGGGTGAAA+AGG 0.435072 7_2:-77675966 None:intergenic
CCTCAATTTCACTTGGGACC+AGG 0.436900 7_2:+77676578 Msa1078670:CDS
CGAAGGTTGCCAAATAGAAA+AGG 0.437602 7_2:+77676757 Msa1078670:CDS
ATTGTATCTTCAGGGGCAAC+AGG 0.437634 7_2:-77677607 None:intergenic
GGGCAGTTCATGCCTTTAGT+TGG 0.438033 7_2:+77678834 Msa1078670:CDS
CTCCTCGCAAGCAATTTGTT+AGG 0.441589 7_2:+77677845 Msa1078670:CDS
GTGATCTTGGTTAGCGTTGA+CGG 0.444536 7_2:+77676491 Msa1078670:CDS
TTCCTGACCTTCTCGGTAAA+GGG 0.446468 7_2:-77680108 None:intergenic
ACAAGATGAAAGGTCCTCAT+TGG 0.448766 7_2:+77676904 Msa1078670:CDS
CCTGTTGTTATTTCACCTGA+TGG 0.449780 7_2:+77680074 Msa1078670:CDS
GTTCCTGACCTTCTCGGTAA+AGG 0.453457 7_2:-77680109 None:intergenic
TGCTATATGTTCGAACTACT+TGG 0.453590 7_2:+77681043 Msa1078670:three_prime_UTR
GGAGCACGCCTTGGTATGTA+AGG 0.453862 7_2:+77676030 Msa1078670:CDS
TCAGCCGAATCTTCAATTGT+TGG 0.454790 7_2:-77676416 None:intergenic
ATAAACACCCTTAGTTATCA+AGG 0.455833 7_2:-77675931 None:intergenic
GACTCAAATGTCCCTGTTGA+AGG 0.461533 7_2:+77676200 Msa1078670:CDS
GGAAAAGATTGGAACCAGAC+TGG 0.467033 7_2:+77678855 Msa1078670:CDS
ACTGGTTCTGGCATTCGTTC+CGG 0.467940 7_2:+77677124 Msa1078670:CDS
ACGCCTTGGTATGTAAGGTT+TGG 0.469262 7_2:+77676035 Msa1078670:CDS
GTGTTGCTGATTATGTTAGT+AGG 0.469363 7_2:+77676657 Msa1078670:CDS
TCAACCAACAATTGAAGATT+CGG 0.477254 7_2:+77676412 Msa1078670:CDS
GGACTTGCAGGGTTCTAATC+CGG 0.477849 7_2:+77676466 Msa1078670:CDS
AAGTCCAGCGATGATAATCC+TGG 0.480068 7_2:+77677655 Msa1078670:CDS
TTGGCTCTAATTCTGAGATA+GGG 0.481968 7_2:-77676529 None:intergenic
CCACAGGAATTGTATCTTCA+GGG 0.482375 7_2:-77677615 None:intergenic
CTATTTGGCAACCTTCGAGC+TGG 0.483317 7_2:-77676751 None:intergenic
ACATCAACAGCACCACCAAA+AGG 0.484992 7_2:-77675975 None:intergenic
CACGAACTTAAGGCGGGTAT+GGG 0.485013 7_2:+77677406 Msa1078670:CDS
GCAACCTTCGAGCTGGACCC+CGG 0.485525 7_2:-77676744 None:intergenic
TGGGCTTACAAGTTAGGGGT+TGG 0.486544 7_2:-77675402 None:intergenic
GATTATAACCCATTCTATGC+GGG 0.488504 7_2:+77680394 Msa1078670:CDS
GAAAAGATTGGAACCAGACT+GGG 0.489336 7_2:+77678856 Msa1078670:CDS
ACATCAGCTGTTGAAGCATC+CGG 0.489891 7_2:-77676680 None:intergenic
AGAGCCAAACAAATCAGATT+CGG 0.494261 7_2:-77677788 None:intergenic
CGTCCAGACGAAGATGGTCC+AGG 0.496672 7_2:-77677673 None:intergenic
TTCCTGTGGGTCAAGATGAT+AGG 0.496718 7_2:+77677629 Msa1078670:CDS
CAACCCCACTTAGTGGGATA+AGG 0.498769 7_2:+77680968 Msa1078670:three_prime_UTR
CGCCCCTCTTGTTCTTGGAG+TGG 0.499616 7_2:+77677564 Msa1078670:CDS
AATATTTATCATTAACCCTA+AGG 0.500228 7_2:+77680477 Msa1078670:CDS
AATCCTGGACCATCTTCGTC+TGG 0.500733 7_2:+77677670 Msa1078670:CDS
GCGGCTGTCCAAAATGTTAA+CGG 0.501411 7_2:+77681017 Msa1078670:three_prime_UTR
GAGTTATCTACCATGGGAAA+AGG 0.503668 7_2:+77677540 Msa1078670:CDS
TGCCAAACCCCGCATAGAAT+GGG 0.504754 7_2:-77680402 None:intergenic
ATTTAAAATCAGAATTTCAA+GGG 0.506367 7_2:+77677071 Msa1078670:CDS
ATGTAGCCAACCCCACTTAG+TGG 0.507195 7_2:+77680961 Msa1078670:three_prime_UTR
AGTTCCTGGTTATATAAGCC+TGG 0.510579 7_2:-77679863 None:intergenic
GAGGGTTCTAGGAACACAAC+AGG 0.510904 7_2:+77677948 Msa1078670:CDS
CCATCAGGTGAAATAACAAC+AGG 0.512658 7_2:-77680074 None:intergenic
CCTGGTCCCAAGTGAAATTG+AGG 0.512878 7_2:-77676578 None:intergenic
AATTTAAAATCAGAATTTCA+AGG 0.515613 7_2:+77677070 Msa1078670:CDS
AAAGCCTTGCCACCCCAGTC+TGG 0.517161 7_2:-77678869 None:intergenic
ATTGTTGTTCAGCAACAAGA+TGG 0.518652 7_2:+77675999 Msa1078670:CDS
AGGGACGGAAATAATCCATC+AGG 0.519561 7_2:-77680089 None:intergenic
TAGAATGGGTTATAATCAGA+AGG 0.527886 7_2:-77680388 None:intergenic
GTTGAGCCATCTCCAACCTC+AGG 0.531698 7_2:+77677811 Msa1078670:CDS
ACAAATTCCTCAATTTCACT+TGG 0.532985 7_2:+77676571 Msa1078670:CDS
TGAAGAAGTAGCACCACTGA+TGG 0.536057 7_2:-77677029 None:intergenic
ATTGTAATTTCAGATGTGGA+TGG 0.540092 7_2:+77678106 Msa1078670:CDS
TTTCACTTGGGACCAGGTGA+AGG 0.540389 7_2:+77676584 Msa1078670:CDS
CTTATCCCACTAAGTGGGGT+TGG 0.541703 7_2:-77680967 None:intergenic
TTTGGAACCTTGATAACTAA+GGG 0.543072 7_2:+77675924 Msa1078670:CDS
GACTCAAGCCTACCTGAGGT+TGG 0.546268 7_2:-77677823 None:intergenic
CCCTCTTGTTCTTGGAGTGG+CGG 0.548536 7_2:+77677567 Msa1078670:CDS
CTGGACGTAGGTGGAGACTC+TGG 0.548685 7_2:+77677689 Msa1078670:CDS
AAGACAGCTGAGCACAATAG+TGG 0.548705 7_2:+77677733 Msa1078670:CDS
AGCCTACCTGAGGTTGGAGA+TGG 0.549317 7_2:-77677817 None:intergenic
TTTCCGTCCCTTTACCGAGA+AGG 0.550428 7_2:+77680101 Msa1078670:CDS
ATGGCAATTTACAAGATGAA+AGG 0.551334 7_2:+77676894 Msa1078670:CDS
TGGTCCAGGATTATCATCGC+TGG 0.553435 7_2:-77677659 None:intergenic
CAAATTCCTCAATTTCACTT+GGG 0.554755 7_2:+77676572 Msa1078670:CDS
CATCAACAGCACCACCAAAA+GGG 0.556201 7_2:-77675974 None:intergenic
TTTGCCAGAACTTCAAAAGG+TGG 0.556741 7_2:+77676349 Msa1078670:CDS
AACCTATCATCTTGACCCAC+AGG 0.558319 7_2:-77677631 None:intergenic
GAAGGTTGCCAAATAGAAAA+GGG 0.559450 7_2:+77676758 Msa1078670:CDS
GTTGTGGGCTTACAAGTTAG+GGG 0.560528 7_2:-77675406 None:intergenic
TGCTGATTATGTTAGTAGGC+CGG 0.561183 7_2:+77676661 Msa1078670:CDS
CCATTCCACATCATTCGTAC+CGG 0.561582 7_2:-77677143 None:intergenic
CCCTGAAGATACAATTCCTG+TGG 0.563260 7_2:+77677615 Msa1078670:CDS
AACATTCAGTTTCTCTACGA+GGG 0.564099 7_2:+77677930 Msa1078670:CDS
AACAGCCTTATCCCACTAAG+TGG 0.568076 7_2:-77680973 None:intergenic
GGAACCAGACTGGGGTGGCA+AGG 0.569774 7_2:+77678865 Msa1078670:CDS
TTACAAGTTAGGGGTTGGAA+TGG 0.571871 7_2:-77675397 None:intergenic
GCATCATTGAATCTCAAAGA+TGG 0.573195 7_2:+77677895 Msa1078670:CDS
GTCCTAACAAATTGCTTGCG+AGG 0.573977 7_2:-77677847 None:intergenic
ACTAATAATTTCAAGTACAG+TGG 0.575677 7_2:-77677188 None:intergenic
TTCACTTGGGACCAGGTGAA+GGG 0.578350 7_2:+77676585 Msa1078670:CDS
ATAAAATGTCCGACCAACAT+CGG 0.579316 7_2:-77676375 None:intergenic
ACGCTAACCAAGATCACCTC+CGG 0.579858 7_2:-77676485 None:intergenic
ACAGCCTTATCCCACTAAGT+GGG 0.580936 7_2:-77680972 None:intergenic
GATGCTATCATCTCATTAGA+GGG 0.581965 7_2:-77677877 None:intergenic
TCATTGGAAGTTGCTGTCTG+AGG 0.582855 7_2:-77677232 None:intergenic
CAAAAGGTGGAATCCGATGT+TGG 0.583418 7_2:+77676362 Msa1078670:CDS
TCTGAGTTTACTTCTGAAGA+CGG 0.583454 7_2:+77676233 Msa1078670:CDS
CAGAGAGAGTTATCTACCAT+GGG 0.583701 7_2:+77677534 Msa1078670:CDS
AAATTTCAAGGTGTTCTCAA+AGG 0.584146 7_2:+77676059 Msa1078670:CDS
TAGAAATCAGTCCCTTCACC+TGG 0.588186 7_2:-77676596 None:intergenic
AAGAATTGTAATTTCAGATG+TGG 0.588816 7_2:+77678102 Msa1078670:CDS
CCGGTACGAATGATGTGGAA+TGG 0.589277 7_2:+77677143 Msa1078670:CDS
TGTTCAAGCAAAGACGTAGG+AGG 0.592284 7_2:-77680672 None:intergenic
TGGCTCTAATTCTGAGATAG+GGG 0.597023 7_2:-77676528 None:intergenic
TCAGAGAGAGTTATCTACCA+TGG 0.597194 7_2:+77677533 Msa1078670:CDS
CCGCCACTCCAAGAACAAGA+GGG 0.598140 7_2:-77677567 None:intergenic
CAGACAGCAACTTCCAATGA+GGG 0.598692 7_2:+77677235 Msa1078670:CDS
TGTACTTGAAATTATTAGTG+AGG 0.600231 7_2:+77677192 Msa1078670:CDS
TATAAGCCTGGACAATAGCA+CGG 0.602894 7_2:-77679851 None:intergenic
CACCTACGTCCAGACGAAGA+TGG 0.604562 7_2:-77677679 None:intergenic
GCCGCCACTCCAAGAACAAG+AGG 0.605405 7_2:-77677568 None:intergenic
AGTAAGTCACTTTACAAGCA+AGG 0.605483 7_2:-77681078 None:intergenic
GAAGAAGTAGCACCACTGAT+GGG 0.605725 7_2:-77677028 None:intergenic
TTTAAAATCAGAATTTCAAG+GGG 0.607929 7_2:+77677072 Msa1078670:CDS
GAGAATGTTGTGGACTTGCA+GGG 0.608699 7_2:+77676455 Msa1078670:CDS
AGTAAAATAGGAATTCCAAA+GGG 0.609251 7_2:+77680451 Msa1078670:CDS
TGTGGTCACGAACTTAAGGC+GGG 0.610181 7_2:+77677400 Msa1078670:CDS
CAGTAAAATAGGAATTCCAA+AGG 0.610652 7_2:+77680450 Msa1078670:CDS
TGTAGCCAACCCCACTTAGT+GGG 0.611984 7_2:+77680962 Msa1078670:three_prime_UTR
ATTATAACCCATTCTATGCG+GGG 0.612931 7_2:+77680395 Msa1078670:CDS
GTTCAAGATTGCTTGTCTAG+AGG 0.613173 7_2:+77680239 Msa1078670:CDS
TTACCAAACCTTACATACCA+AGG 0.615393 7_2:-77676038 None:intergenic
AGGTGGAATCCGATGTTGGT+CGG 0.615446 7_2:+77676366 Msa1078670:CDS
TTGTGGTCACGAACTTAAGG+CGG 0.615928 7_2:+77677399 Msa1078670:CDS
ATAAGCCTGGACAATAGCAC+GGG 0.616334 7_2:-77679850 None:intergenic
CACTCCAAGAACAAGAGGGG+CGG 0.618301 7_2:-77677563 None:intergenic
TGTGAAGATAAATGTTAATG+GGG 0.619954 7_2:+77676094 Msa1078670:CDS
TCGTTCCGGTACGAATGATG+TGG 0.621957 7_2:+77677138 Msa1078670:CDS
AACTAATCAATATCTGGCAT+AGG 0.627013 7_2:-77680820 None:intergenic
CAAGCAATCTTGAACTCATG+AGG 0.627073 7_2:-77680231 None:intergenic
CGCCACTCCAAGAACAAGAG+GGG 0.627600 7_2:-77677566 None:intergenic
CATCTTCGTCTGGACGTAGG+TGG 0.627651 7_2:+77677680 Msa1078670:CDS
AAAGAAAGAATGAATGTGGT+GGG 0.628462 7_2:+77675897 Msa1078670:exon
GCATCAGTGGAAGTTGACAC+TGG 0.631154 7_2:+77677106 Msa1078670:CDS
TGACCTTCTCGGTAAAGGGA+CGG 0.631465 7_2:-77680104 None:intergenic
TCAGACAGCAACTTCCAATG+AGG 0.632178 7_2:+77677234 Msa1078670:CDS
TTGTCCAGGCTTATATAACC+AGG 0.632877 7_2:+77679859 Msa1078670:CDS
ATCATAGCGTATCTGATTCG+GGG 0.633177 7_2:+77676291 Msa1078670:CDS
GACAGCAACTTCCAATGAGG+GGG 0.633635 7_2:+77677237 Msa1078670:CDS
TATCGGTAATAGTGCTTCCG+GGG 0.633679 7_2:+77676727 Msa1078670:CDS
TATGTATCTTGATAATTCCG+GGG 0.634354 7_2:+77676133 Msa1078670:CDS
GAAAGAAAGAATGAATGTGG+TGG 0.636069 7_2:+77675896 Msa1078670:exon
GGTGAGTTATCTCCCATCAG+TGG 0.640463 7_2:+77677016 Msa1078670:CDS
AGAATGGGTTATAATCAGAA+GGG 0.641875 7_2:-77680387 None:intergenic
GAAGGGACTGATTTCTACGA+AGG 0.643261 7_2:+77676602 Msa1078670:CDS
GGTTGATAAAGATGCATCAG+TGG 0.645734 7_2:+77677093 Msa1078670:CDS
ACAGATTGAGAAAACGAATG+AGG 0.646242 7_2:-77675521 None:intergenic
TCAGAGCTATAAATACTGGA+AGG 0.646669 7_2:-77676704 None:intergenic
GTTCAAGCAAAGACGTAGGA+GGG 0.648088 7_2:-77680671 None:intergenic
TGATTATAACCCATTCTATG+CGG 0.650443 7_2:+77680393 Msa1078670:CDS
CCTGAAGATACAATTCCTGT+GGG 0.650890 7_2:+77677616 Msa1078670:CDS
CACAGGAATTGTATCTTCAG+GGG 0.660656 7_2:-77677614 None:intergenic
ACTGAAAGAAAGAATGAATG+TGG 0.662863 7_2:+77675893 Msa1078670:exon
TGAACACTAATAGGGTGAGG+TGG 0.663341 7_2:+77680584 Msa1078670:intron
CTTGCAGGGTTCTAATCCGG+AGG 0.664062 7_2:+77676469 Msa1078670:CDS
AGACAGCAACTTCCAATGAG+GGG 0.667001 7_2:+77677236 Msa1078670:CDS
TCATAGCGTATCTGATTCGG+GGG 0.670402 7_2:+77676292 Msa1078670:CDS
CAGCCTTATCCCACTAAGTG+GGG 0.671353 7_2:-77680971 None:intergenic
ACCACCAAAAGGGTGAAAAG+GGG 0.671766 7_2:-77675964 None:intergenic
AGCACATCGAATATCTGCTG+AGG 0.674065 7_2:+77677456 Msa1078670:CDS
GGTGAATCAAAACTCAGCGG+AGG 0.674797 7_2:+77676925 Msa1078670:CDS
AGTTAGTAACACCTTCAACA+GGG 0.677470 7_2:-77676211 None:intergenic
AGGAGACTCAAGCCTACCTG+AGG 0.678173 7_2:-77677827 None:intergenic
TAGTGGTGATGAATCAAGTG+AGG 0.678368 7_2:+77677750 Msa1078670:CDS
GTATCTTGATAATTCCGGGG+AGG 0.679242 7_2:+77676136 Msa1078670:CDS
AGAATATGGAGAGAATGTTG+TGG 0.680826 7_2:+77676445 Msa1078670:CDS
TGATTTCTACGAAGGCAATG+AGG 0.683113 7_2:+77676610 Msa1078670:CDS
TAACATTCAGTTTCTCTACG+AGG 0.686208 7_2:+77677929 Msa1078670:CDS
GACCATCTTCGTCTGGACGT+AGG 0.688284 7_2:+77677677 Msa1078670:CDS
CTCAGAATTAGAGCCAACTG+AGG 0.700989 7_2:+77676535 Msa1078670:CDS
AAAGGGACCTATTTGTCACA+CGG 0.702150 7_2:+77676775 Msa1078670:CDS
AGCCATCTCCAACCTCAGGT+AGG 0.703115 7_2:+77677815 Msa1078670:CDS
TGTAATTGTTTGGTATTGGG+CGG 0.703952 7_2:+77680998 Msa1078670:three_prime_UTR
AGATTGGAACCAGACTGGGG+TGG 0.726345 7_2:+77678860 Msa1078670:CDS
AAAAGATTGGAACCAGACTG+GGG 0.727153 7_2:+77678857 Msa1078670:CDS
ACCTGTTCAAGCAAAGACGT+AGG 0.741164 7_2:-77680675 None:intergenic
ATTGGTGAATCAAAACTCAG+CGG 0.751587 7_2:+77676922 Msa1078670:CDS
GGGACCTATTTGTCACACGG+AGG 0.770332 7_2:+77676778 Msa1078670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAACAATTTAGAAATAT+TGG + chr7_2:77676995-77677014 Msa1078670:CDS 10.0%
!!! ATATTTGTTTTTTTCTTAAA+AGG + chr7_2:77678649-77678668 Msa1078670:intron 10.0%
!! CTATTAATTAAAAGTTTCTT+CGG + chr7_2:77675817-77675836 Msa1078670:five_prime_UTR 15.0%
!!! AATTTAAAATCAGAATTTCA+AGG + chr7_2:77677070-77677089 Msa1078670:CDS 15.0%
!!! ATTTAAAATCAGAATTTCAA+GGG + chr7_2:77677071-77677090 Msa1078670:CDS 15.0%
!! AAGAAAATCAAATAAACAAT+TGG - chr7_2:77677349-77677368 None:intergenic 15.0%
!!! TTTTTATTCTTAGTTATAGA+TGG - chr7_2:77677499-77677518 None:intergenic 15.0%
!!! GATTCATTTTATAAAATAAG+GGG - chr7_2:77678264-77678283 None:intergenic 15.0%
!!! GGATTCATTTTATAAAATAA+GGG - chr7_2:77678265-77678284 None:intergenic 15.0%
!! TTTACTTCATAAATGAAAAT+AGG + chr7_2:77678335-77678354 Msa1078670:intron 15.0%
!! TTACTTCATAAATGAAAATA+GGG + chr7_2:77678336-77678355 Msa1078670:intron 15.0%
!! ATAAAATTCAATGAAACAAT+AGG - chr7_2:77679754-77679773 None:intergenic 15.0%
!!! ATATTTTAACAATGATAACT+GGG - chr7_2:77679988-77680007 None:intergenic 15.0%
!!! AATATTTTAACAATGATAAC+TGG - chr7_2:77679989-77680008 None:intergenic 15.0%
!!! AATTTTGTCTTATTTACTTA+TGG + chr7_2:77680191-77680210 Msa1078670:intron 15.0%
!!! ATTGAATTGAATTTTGTTGT+GGG - chr7_2:77675424-77675443 None:intergenic 20.0%
!!! AATTGAATTGAATTTTGTTG+TGG - chr7_2:77675425-77675444 None:intergenic 20.0%
!! TCATTGATATTTAATGTTAG+AGG - chr7_2:77675596-77675615 None:intergenic 20.0%
!!! TTTTTAAGTTGAATTTGACT+TGG + chr7_2:77675645-77675664 Msa1078670:intron 20.0%
!! AGAAAAGAAAAGAAAAGAAA+AGG - chr7_2:77675712-77675731 None:intergenic 20.0%
!! ATTGTGAAGATAAATGTTAA+TGG + chr7_2:77676092-77676111 Msa1078670:CDS 20.0%
!! TTGTGAAGATAAATGTTAAT+GGG + chr7_2:77676093-77676112 Msa1078670:CDS 20.0%
!!! TTTAAAATCAGAATTTCAAG+GGG + chr7_2:77677072-77677091 Msa1078670:CDS 20.0%
!!! AATTGGCTTAATCAAATAAT+AGG - chr7_2:77677332-77677351 None:intergenic 20.0%
!! CAAAGTATATATAGTGATAT+GGG - chr7_2:77678000-77678019 None:intergenic 20.0%
!!! TGAACTTTTAATTTCATAAC+AGG + chr7_2:77678045-77678064 Msa1078670:intron 20.0%
!! TTGATGCTCATATATATTTA+TGG + chr7_2:77678068-77678087 Msa1078670:CDS 20.0%
!!! GGGATTCATTTTATAAAATA+AGG - chr7_2:77678266-77678285 None:intergenic 20.0%
!!! TTTGTCTTTTAGTAATCTTA+TGG + chr7_2:77678379-77678398 Msa1078670:intron 20.0%
!!! TCTTTTCAAAATTTAGACAA+TGG - chr7_2:77678502-77678521 None:intergenic 20.0%
!!! TTTTCTTCATTATCTTTTTC+TGG + chr7_2:77678526-77678545 Msa1078670:intron 20.0%
!!! TATGAATATGTGCATTTTTA+AGG - chr7_2:77678777-77678796 None:intergenic 20.0%
!!! CTTAATGGTATTCTTTTTTA+CGG + chr7_2:77679171-77679190 Msa1078670:intron 20.0%
!!! ATGATAAATATTTTTCCCTT+TGG - chr7_2:77680469-77680488 None:intergenic 20.0%
!! AATATTTATCATTAACCCTA+AGG + chr7_2:77680477-77680496 Msa1078670:CDS 20.0%
!! ACTTTCAAAACTAACAAATT+TGG + chr7_2:77680741-77680760 Msa1078670:intron 20.0%
!!! TTTCAGTTACATTTTTTACA+CGG + chr7_2:77680852-77680871 Msa1078670:three_prime_UTR 20.0%
!! GTTCTATCATAAAACATATT+TGG - chr7_2:77680921-77680940 None:intergenic 20.0%
! TAGCAAAAAAAAGAAGAAGA+AGG - chr7_2:77675553-77675572 None:intergenic 25.0%
!! AAGATTTAAGTAACGTTTTG+AGG - chr7_2:77675688-77675707 None:intergenic 25.0%
!! CTGAATTTCTTGATTAGTTA+CGG - chr7_2:77675753-77675772 None:intergenic 25.0%
!! AAATTCAGATAATCGATTCT+TGG + chr7_2:77675765-77675784 Msa1078670:five_prime_UTR 25.0%
!! AATTCAGATAATCGATTCTT+GGG + chr7_2:77675766-77675785 Msa1078670:five_prime_UTR 25.0%
!! TAGAAAAGTTCCAGAATTTT+GGG - chr7_2:77675856-77675875 None:intergenic 25.0%
!! ATAGAAAAGTTCCAGAATTT+TGG - chr7_2:77675857-77675876 None:intergenic 25.0%
! ATTTATCTTCACAATCTTCT+CGG - chr7_2:77676087-77676106 None:intergenic 25.0%
! TGTGAAGATAAATGTTAATG+GGG + chr7_2:77676094-77676113 Msa1078670:CDS 25.0%
!! CATATGTATCTTGATAATTC+CGG + chr7_2:77676131-77676150 Msa1078670:CDS 25.0%
!! ATATGTATCTTGATAATTCC+GGG + chr7_2:77676132-77676151 Msa1078670:CDS 25.0%
!! AGTGTTGAAATTGATATTAC+TGG + chr7_2:77676257-77676276 Msa1078670:CDS 25.0%
!!! AGTATTTATAGCTCTGATAT+CGG + chr7_2:77676710-77676729 Msa1078670:CDS 25.0%
!! ACTAATAATTTCAAGTACAG+TGG - chr7_2:77677191-77677210 None:intergenic 25.0%
! TGTACTTGAAATTATTAGTG+AGG + chr7_2:77677192-77677211 Msa1078670:CDS 25.0%
! CCAAAGTATATATAGTGATA+TGG - chr7_2:77678001-77678020 None:intergenic 25.0%
! CCATATCACTATATATACTT+TGG + chr7_2:77677998-77678017 Msa1078670:intron 25.0%
! CTCATATATATTTATGGAAG+TGG + chr7_2:77678074-77678093 Msa1078670:CDS 25.0%
! AAGAATTGTAATTTCAGATG+TGG + chr7_2:77678102-77678121 Msa1078670:CDS 25.0%
!! ATTTTGTCGAGTTCAAATAA+TGG - chr7_2:77678178-77678197 None:intergenic 25.0%
! TTATAAAATGAATCCCAGTT+TGG + chr7_2:77678270-77678289 Msa1078670:intron 25.0%
! AACAATTACTGAAATTTGCA+TGG - chr7_2:77678301-77678320 None:intergenic 25.0%
! TCATAAATGAAAATAGGGAA+AGG + chr7_2:77678341-77678360 Msa1078670:intron 25.0%
! CAACTAAATAGATACCTTAA+TGG - chr7_2:77678901-77678920 None:intergenic 25.0%
! TTGTCTCAAAACTGAAAATT+TGG - chr7_2:77679115-77679134 None:intergenic 25.0%
! TTAAGTTAACAGAAGTTGTT+TGG - chr7_2:77679156-77679175 None:intergenic 25.0%
! AACAACTTCTGTTAACTTAA+TGG + chr7_2:77679156-77679175 Msa1078670:intron 25.0%
! ATATATACACACACATTAAC+AGG + chr7_2:77679271-77679290 Msa1078670:intron 25.0%
!! GTAAAAGACTAGTTAGATAA+TGG + chr7_2:77679410-77679429 Msa1078670:intron 25.0%
! TAGTTGAATCTAAATTCTAC+AGG - chr7_2:77679655-77679674 None:intergenic 25.0%
! TTAGATTCAACTACATTTAG+TGG + chr7_2:77679662-77679681 Msa1078670:intron 25.0%
!! TTATATAACCAGGAACTTTT+TGG + chr7_2:77679869-77679888 Msa1078670:CDS 25.0%
! TTTGTTTAAATACCTGTTTC+AGG - chr7_2:77679899-77679918 None:intergenic 25.0%
! AACAGGTATTTAAACAAATC+TGG + chr7_2:77679901-77679920 Msa1078670:intron 25.0%
!! AAAATAAGAGTATGCATTAC+AGG - chr7_2:77679930-77679949 None:intergenic 25.0%
! AAAATATTGCATTACCTGAT+AGG + chr7_2:77680001-77680020 Msa1078670:intron 25.0%
! TACCATAACTATATATTTGC+AGG + chr7_2:77680028-77680047 Msa1078670:intron 25.0%
! ATCCTGCAAATATATAGTTA+TGG - chr7_2:77680033-77680052 None:intergenic 25.0%
! ATAACTATATATTTGCAGGA+TGG + chr7_2:77680032-77680051 Msa1078670:intron 25.0%
!! TTTTAATGAGAGAGCAATTA+AGG + chr7_2:77680132-77680151 Msa1078670:intron 25.0%
! GAACTTAGTTACAGTAAAAT+AGG + chr7_2:77680439-77680458 Msa1078670:CDS 25.0%
! AGTAAAATAGGAATTCCAAA+GGG + chr7_2:77680451-77680470 Msa1078670:CDS 25.0%
!!! TGGATTATTGTTATTTCTGA+CGG + chr7_2:77680513-77680532 Msa1078670:intron 25.0%
! ATATGCTTATGAACACTAAT+AGG + chr7_2:77680575-77680594 Msa1078670:intron 25.0%
! TATGCTTATGAACACTAATA+GGG + chr7_2:77680576-77680595 Msa1078670:intron 25.0%
!!! AGAAAGCATTTACAAAACAA+CGG + chr7_2:77680699-77680718 Msa1078670:intron 25.0%
! ACATAGAACTAATCAATATC+TGG - chr7_2:77680829-77680848 None:intergenic 25.0%
! TGGTATTAGGAAAAATTTAG+AGG + chr7_2:77680881-77680900 Msa1078670:three_prime_UTR 25.0%
! TTGTTGTAATTGTTTGGTAT+TGG + chr7_2:77680994-77681013 Msa1078670:three_prime_UTR 25.0%
! TGTTGTAATTGTTTGGTATT+GGG + chr7_2:77680995-77681014 Msa1078670:three_prime_UTR 25.0%
!!! TTTAAGTAACGTTTTGAGGA+TGG - chr7_2:77675684-77675703 None:intergenic 30.0%
! AAAAGTTTCTTCGGTCTTTT+TGG + chr7_2:77675826-77675845 Msa1078670:five_prime_UTR 30.0%
ACTGAAAGAAAGAATGAATG+TGG + chr7_2:77675893-77675912 Msa1078670:exon 30.0%
AAAGAAAGAATGAATGTGGT+GGG + chr7_2:77675897-77675916 Msa1078670:exon 30.0%
! ATTTGGAACCTTGATAACTA+AGG + chr7_2:77675923-77675942 Msa1078670:CDS 30.0%
! TTTGGAACCTTGATAACTAA+GGG + chr7_2:77675924-77675943 Msa1078670:CDS 30.0%
ATAAACACCCTTAGTTATCA+AGG - chr7_2:77675934-77675953 None:intergenic 30.0%
! GTAAGGTTTGGTAAATTTCA+AGG + chr7_2:77676047-77676066 Msa1078670:CDS 30.0%
! AAATTTCAAGGTGTTCTCAA+AGG + chr7_2:77676059-77676078 Msa1078670:CDS 30.0%
! TATGTATCTTGATAATTCCG+GGG + chr7_2:77676133-77676152 Msa1078670:CDS 30.0%
TCAACCAACAATTGAAGATT+CGG + chr7_2:77676412-77676431 Msa1078670:CDS 30.0%
ACAAATTCCTCAATTTCACT+TGG + chr7_2:77676571-77676590 Msa1078670:CDS 30.0%
CAAATTCCTCAATTTCACTT+GGG + chr7_2:77676572-77676591 Msa1078670:CDS 30.0%
GATATCAGAGCTATAAATAC+TGG - chr7_2:77676711-77676730 None:intergenic 30.0%
! AAATAGGTCCCTTTTCTATT+TGG - chr7_2:77676769-77676788 None:intergenic 30.0%
ATGGCAATTTACAAGATGAA+AGG + chr7_2:77676894-77676913 Msa1078670:CDS 30.0%
GAATTTGATATCTCACTTTG+TGG + chr7_2:77677382-77677401 Msa1078670:intron 30.0%
TCTCAAAGATGGTCAAAATA+TGG + chr7_2:77677906-77677925 Msa1078670:CDS 30.0%
TATATAGTGATATGGGAACT+TGG - chr7_2:77677993-77678012 None:intergenic 30.0%
ATCACTATATATACTTTGGC+TGG + chr7_2:77678002-77678021 Msa1078670:intron 30.0%
TCAACCTGAAATAAGCAAAA+TGG - chr7_2:77678028-77678047 None:intergenic 30.0%
ATTGTAATTTCAGATGTGGA+TGG + chr7_2:77678106-77678125 Msa1078670:CDS 30.0%
AATAAGGGGTTAATTGAGTA+CGG - chr7_2:77678250-77678269 None:intergenic 30.0%
CAAACTAACGATGAATGTTT+AGG - chr7_2:77678448-77678467 None:intergenic 30.0%
AATTTAGACAATGGATCACT+AGG - chr7_2:77678493-77678512 None:intergenic 30.0%
!! TATCTTTTTCTGGCCATTTT+TGG + chr7_2:77678536-77678555 Msa1078670:intron 30.0%
CAATCAAAGTAGATACTAGT+TGG - chr7_2:77678572-77678591 None:intergenic 30.0%
GTAATATGTTTGTGCATGTA+AGG - chr7_2:77678741-77678760 None:intergenic 30.0%
!! GAATATGTGCATTTTTAAGG+AGG - chr7_2:77678774-77678793 None:intergenic 30.0%
! TTCCAATCTTTTCCAACTAA+AGG - chr7_2:77678849-77678868 None:intergenic 30.0%
!! CAAACAGTTGATGATGTAAA+TGG + chr7_2:77678967-77678986 Msa1078670:intron 30.0%
AAATGGTAGAAGATATTTCG+AGG + chr7_2:77678984-77679003 Msa1078670:intron 30.0%
AATGGTAGAAGATATTTCGA+GGG + chr7_2:77678985-77679004 Msa1078670:intron 30.0%
! ATTTAAAGCATCTTGTGTCT+TGG + chr7_2:77679015-77679034 Msa1078670:intron 30.0%
TAATGAAATGGTAGCAACAA+AGG - chr7_2:77679057-77679076 None:intergenic 30.0%
GTGACAGAAACATAATGAAA+TGG - chr7_2:77679069-77679088 None:intergenic 30.0%
AAAATTTGGACCCCTAATTT+GGG - chr7_2:77679101-77679120 None:intergenic 30.0%
CTCTTTGCAGCTATATAATA+TGG + chr7_2:77679433-77679452 Msa1078670:intron 30.0%
TAAGTGTCCAAATAGAAACA+GGG - chr7_2:77679583-77679602 None:intergenic 30.0%
TTAAGTGTCCAAATAGAAAC+AGG - chr7_2:77679584-77679603 None:intergenic 30.0%
CACTTAATGCTTGTTTGATT+TGG + chr7_2:77679597-77679616 Msa1078670:intron 30.0%
GAATCTAAATTCTACAGGAA+TGG - chr7_2:77679650-77679669 None:intergenic 30.0%
! TCCTGATTTTGTTAGGAAAA+TGG + chr7_2:77679804-77679823 Msa1078670:intron 30.0%
! TCCATTTTCCTAACAAAATC+AGG - chr7_2:77679808-77679827 None:intergenic 30.0%
TGATATAAGGATTTGTGTCT+AGG - chr7_2:77680271-77680290 None:intergenic 30.0%
AGTTGCACATTAGTGATATA+AGG - chr7_2:77680284-77680303 None:intergenic 30.0%
TTACTAACACCATTCATGTT+TGG + chr7_2:77680330-77680349 Msa1078670:intron 30.0%
TACTAACACCATTCATGTTT+GGG + chr7_2:77680331-77680350 Msa1078670:intron 30.0%
CATTATTACCCAAACATGAA+TGG - chr7_2:77680342-77680361 None:intergenic 30.0%
! TTTGGGTAATAATGTTTTGC+AGG + chr7_2:77680348-77680367 Msa1078670:intron 30.0%
!! AGAATGGGTTATAATCAGAA+GGG - chr7_2:77680390-77680409 None:intergenic 30.0%
!! TAGAATGGGTTATAATCAGA+AGG - chr7_2:77680391-77680410 None:intergenic 30.0%
TGATTATAACCCATTCTATG+CGG + chr7_2:77680393-77680412 Msa1078670:CDS 30.0%
CAGTAAAATAGGAATTCCAA+AGG + chr7_2:77680450-77680469 Msa1078670:CDS 30.0%
!!! GTATTTTCTTTAGTTCTCAC+AGG + chr7_2:77680539-77680558 Msa1078670:intron 30.0%
!! GAAAGCATTTACAAAACAAC+GGG + chr7_2:77680700-77680719 Msa1078670:intron 30.0%
!! TGGTTTGCAATTTTCATTTG+TGG + chr7_2:77680761-77680780 Msa1078670:intron 30.0%
ACTTCAACTCTTGGAATTAT+TGG + chr7_2:77680791-77680810 Msa1078670:CDS 30.0%
AACTAATCAATATCTGGCAT+AGG - chr7_2:77680823-77680842 None:intergenic 30.0%
!!! CATTTTTTACACGGATTCTT+TGG + chr7_2:77680861-77680880 Msa1078670:three_prime_UTR 30.0%
! TAGCATTTCCGTTAACATTT+TGG - chr7_2:77681028-77681047 None:intergenic 30.0%
ACAGATTGAGAAAACGAATG+AGG - chr7_2:77675524-77675543 None:intergenic 35.0%
!!! TTTTGGTTCTCCCAAAATTC+TGG + chr7_2:77675843-77675862 Msa1078670:five_prime_UTR 35.0%
GAAAGAAAGAATGAATGTGG+TGG + chr7_2:77675896-77675915 Msa1078670:exon 35.0%
! ATGAATGTGGTGGGAAAATT+TGG + chr7_2:77675906-77675925 Msa1078670:CDS 35.0%
! ATTGTTGTTCAGCAACAAGA+TGG + chr7_2:77675999-77676018 Msa1078670:CDS 35.0%
! AGCAACAAGATGGAACTTTT+CGG + chr7_2:77676009-77676028 Msa1078670:CDS 35.0%
TTACCAAACCTTACATACCA+AGG - chr7_2:77676041-77676060 None:intergenic 35.0%
! TTTTACAAAATAAGCCTCCC+CGG - chr7_2:77676153-77676172 None:intergenic 35.0%
!!! GGAGGCTTATTTTGTAAAAG+AGG + chr7_2:77676154-77676173 Msa1078670:CDS 35.0%
!!! GGCTTATTTTGTAAAAGAGG+TGG + chr7_2:77676157-77676176 Msa1078670:CDS 35.0%
! TTTTGTAAAAGAGGTGGATG+AGG + chr7_2:77676163-77676182 Msa1078670:CDS 35.0%
AGTTAGTAACACCTTCAACA+GGG - chr7_2:77676214-77676233 None:intergenic 35.0%
! TCTGAGTTTACTTCTGAAGA+CGG + chr7_2:77676233-77676252 Msa1078670:CDS 35.0%
TGATCATAGCGTATCTGATT+CGG + chr7_2:77676289-77676308 Msa1078670:CDS 35.0%
! AGTTTTGCCAGAACTTCAAA+AGG + chr7_2:77676346-77676365 Msa1078670:CDS 35.0%
ATAAAATGTCCGACCAACAT+CGG - chr7_2:77676378-77676397 None:intergenic 35.0%
AGAATATGGAGAGAATGTTG+TGG + chr7_2:77676445-77676464 Msa1078670:CDS 35.0%
!! TTGGCTCTAATTCTGAGATA+GGG - chr7_2:77676532-77676551 None:intergenic 35.0%
! GTGTTGCTGATTATGTTAGT+AGG + chr7_2:77676657-77676676 Msa1078670:CDS 35.0%
TCAGAGCTATAAATACTGGA+AGG - chr7_2:77676707-77676726 None:intergenic 35.0%
GAAGGTTGCCAAATAGAAAA+GGG + chr7_2:77676758-77676777 Msa1078670:CDS 35.0%
! GAGTGTTTTCAAAAGTTGCT+TGG + chr7_2:77676841-77676860 Msa1078670:CDS 35.0%
!!! TGAGTTTTGATTCACCAATG+AGG - chr7_2:77676921-77676940 None:intergenic 35.0%
ATTGGTGAATCAAAACTCAG+CGG + chr7_2:77676922-77676941 Msa1078670:CDS 35.0%
!!! AAGCCATTTTGGTTTGAGTA+AGG + chr7_2:77677264-77677283 Msa1078670:intron 35.0%
AGTCCTTACTCAAACCAAAA+TGG - chr7_2:77677270-77677289 None:intergenic 35.0%
!! TTCACTTTTCGAAAAGCAAG+AGG - chr7_2:77677715-77677734 None:intergenic 35.0%
!! GATTCCGAATCTGATTTGTT+TGG + chr7_2:77677784-77677803 Msa1078670:CDS 35.0%
AGAGCCAAACAAATCAGATT+CGG - chr7_2:77677791-77677810 None:intergenic 35.0%
GATGCTATCATCTCATTAGA+GGG - chr7_2:77677880-77677899 None:intergenic 35.0%
TGATGCTATCATCTCATTAG+AGG - chr7_2:77677881-77677900 None:intergenic 35.0%
GCATCATTGAATCTCAAAGA+TGG + chr7_2:77677895-77677914 Msa1078670:CDS 35.0%
TAACATTCAGTTTCTCTACG+AGG + chr7_2:77677929-77677948 Msa1078670:CDS 35.0%
AACATTCAGTTTCTCTACGA+GGG + chr7_2:77677930-77677949 Msa1078670:CDS 35.0%
AAGGTAAAGAACGATAGCAA+TGG - chr7_2:77678210-77678229 None:intergenic 35.0%
AAAATAGGGAAAGGAAATGC+AGG + chr7_2:77678350-77678369 Msa1078670:intron 35.0%
TGGTTGATCTTCACCAAAAA+TGG - chr7_2:77678552-77678571 None:intergenic 35.0%
! TGCTTTCAGATCTGATGTTT+TGG + chr7_2:77678812-77678831 Msa1078670:intron 35.0%
! GCTTTCAGATCTGATGTTTT+GGG + chr7_2:77678813-77678832 Msa1078670:intron 35.0%
! CTTTCAGATCTGATGTTTTG+GGG + chr7_2:77678814-77678833 Msa1078670:intron 35.0%
TGCCTTTAGTTGGAAAAGAT+TGG + chr7_2:77678844-77678863 Msa1078670:CDS 35.0%
GAAAATTTGGACCCCTAATT+TGG - chr7_2:77679102-77679121 None:intergenic 35.0%
! GAGTGATTTTTGCAAACACT+TGG + chr7_2:77679233-77679252 Msa1078670:intron 35.0%
!!! CAAGTCTGGTTTTTGCTTTA+TGG + chr7_2:77679367-77679386 Msa1078670:intron 35.0%
!! CATCTTTCCCTGTTTCTATT+TGG + chr7_2:77679573-77679592 Msa1078670:intron 35.0%
! TACCAGATCCTGATTTTGTT+AGG + chr7_2:77679797-77679816 Msa1078670:intron 35.0%
TTCCTAACAAAATCAGGATC+TGG - chr7_2:77679802-77679821 None:intergenic 35.0%
!!! CTTTTTGGTTAACCTGAAAC+AGG + chr7_2:77679884-77679903 Msa1078670:CDS 35.0%
GATGGAAAAACCTTACCAAA+AGG + chr7_2:77680050-77680069 Msa1078670:CDS 35.0%
! GAAATAACAACAGGTCCTTT+TGG - chr7_2:77680068-77680087 None:intergenic 35.0%
TTAAAAGTTCCTGACCTTCT+CGG - chr7_2:77680118-77680137 None:intergenic 35.0%
GATTATAACCCATTCTATGC+GGG + chr7_2:77680394-77680413 Msa1078670:CDS 35.0%
ATTATAACCCATTCTATGCG+GGG + chr7_2:77680395-77680414 Msa1078670:CDS 35.0%
CATTATAGATGCAGACCTTA+GGG - chr7_2:77680495-77680514 None:intergenic 35.0%
TTATGAACACTAATAGGGTG+AGG + chr7_2:77680581-77680600 Msa1078670:intron 35.0%
! TTGCAATTTTCATTTGTGGC+AGG + chr7_2:77680765-77680784 Msa1078670:intron 35.0%
TACACGGATTCTTTGGTATT+AGG + chr7_2:77680868-77680887 Msa1078670:three_prime_UTR 35.0%
AGGCTGTTGTTGTAATTGTT+TGG + chr7_2:77680988-77681007 Msa1078670:three_prime_UTR 35.0%
! TGTAATTGTTTGGTATTGGG+CGG + chr7_2:77680998-77681017 Msa1078670:three_prime_UTR 35.0%
TGCTATATGTTCGAACTACT+TGG + chr7_2:77681043-77681062 Msa1078670:three_prime_UTR 35.0%
! AGTAAGTCACTTTACAAGCA+AGG - chr7_2:77681081-77681100 None:intergenic 35.0%
TTAGGGGTTGGAATGGAATT+TGG - chr7_2:77675393-77675412 None:intergenic 40.0%
TTACAAGTTAGGGGTTGGAA+TGG - chr7_2:77675400-77675419 None:intergenic 40.0%
TGTTGTGGGCTTACAAGTTA+GGG - chr7_2:77675410-77675429 None:intergenic 40.0%
TTGTTGTGGGCTTACAAGTT+AGG - chr7_2:77675411-77675430 None:intergenic 40.0%
! CTTTCTTGCAGTGCTTTGAA+TGG - chr7_2:77675462-77675481 None:intergenic 40.0%
GAGTTAGTAACACCTTCAAC+AGG - chr7_2:77676215-77676234 None:intergenic 40.0%
GATCATAGCGTATCTGATTC+GGG + chr7_2:77676290-77676309 Msa1078670:CDS 40.0%
! ATCATAGCGTATCTGATTCG+GGG + chr7_2:77676291-77676310 Msa1078670:CDS 40.0%
TTTGCCAGAACTTCAAAAGG+TGG + chr7_2:77676349-77676368 Msa1078670:CDS 40.0%
!!! GATTCCACCTTTTGAAGTTC+TGG - chr7_2:77676356-77676375 None:intergenic 40.0%
TCAGCCGAATCTTCAATTGT+TGG - chr7_2:77676419-77676438 None:intergenic 40.0%
!! TCGGCTGATTTGTCAGAATA+TGG + chr7_2:77676431-77676450 Msa1078670:CDS 40.0%
!! TGGCTCTAATTCTGAGATAG+GGG - chr7_2:77676531-77676550 None:intergenic 40.0%
!! GTTGGCTCTAATTCTGAGAT+AGG - chr7_2:77676533-77676552 None:intergenic 40.0%
! GACTGCAAATTTTCCTCAGT+TGG - chr7_2:77676551-77676570 None:intergenic 40.0%
TGATTTCTACGAAGGCAATG+AGG + chr7_2:77676610-77676629 Msa1078670:CDS 40.0%
! TGCTGATTATGTTAGTAGGC+CGG + chr7_2:77676661-77676680 Msa1078670:CDS 40.0%
GATATCGGTAATAGTGCTTC+CGG + chr7_2:77676725-77676744 Msa1078670:CDS 40.0%
ATATCGGTAATAGTGCTTCC+GGG + chr7_2:77676726-77676745 Msa1078670:CDS 40.0%
CGAAGGTTGCCAAATAGAAA+AGG + chr7_2:77676757-77676776 Msa1078670:CDS 40.0%
AAAGGGACCTATTTGTCACA+CGG + chr7_2:77676775-77676794 Msa1078670:CDS 40.0%
AGCTGCATCATGCATGAATT+CGG + chr7_2:77676817-77676836 Msa1078670:CDS 40.0%
! CTTAAATGAACTTGCTCAGC+AGG + chr7_2:77676865-77676884 Msa1078670:CDS 40.0%
ACAAGATGAAAGGTCCTCAT+TGG + chr7_2:77676904-77676923 Msa1078670:CDS 40.0%
!! GGTTGATAAAGATGCATCAG+TGG + chr7_2:77677093-77677112 Msa1078670:CDS 40.0%
ACTTTGTGGTCACGAACTTA+AGG + chr7_2:77677396-77677415 Msa1078670:CDS 40.0%
TCAGAGAGAGTTATCTACCA+TGG + chr7_2:77677533-77677552 Msa1078670:CDS 40.0%
CAGAGAGAGTTATCTACCAT+GGG + chr7_2:77677534-77677553 Msa1078670:CDS 40.0%
GAGTTATCTACCATGGGAAA+AGG + chr7_2:77677540-77677559 Msa1078670:CDS 40.0%
CACAGGAATTGTATCTTCAG+GGG - chr7_2:77677617-77677636 None:intergenic 40.0%
CCACAGGAATTGTATCTTCA+GGG - chr7_2:77677618-77677637 None:intergenic 40.0%
CCTGAAGATACAATTCCTGT+GGG + chr7_2:77677616-77677635 Msa1078670:CDS 40.0%
! TAGTGGTGATGAATCAAGTG+AGG + chr7_2:77677750-77677769 Msa1078670:CDS 40.0%
! TTCTAGGAACACAACAGGTT+TGG + chr7_2:77677953-77677972 Msa1078670:intron 40.0%
!! CTGGCCATTTTGCTTATTTC+AGG + chr7_2:77678021-77678040 Msa1078670:intron 40.0%
! GTACTGTCAGTAGTCTTACT+TGG - chr7_2:77678140-77678159 None:intergenic 40.0%
GACTACTGACAGTACTTCTT+AGG + chr7_2:77678145-77678164 Msa1078670:intron 40.0%
TTGCATGGTATGTCCAAACT+GGG - chr7_2:77678286-77678305 None:intergenic 40.0%
TTTGCATGGTATGTCCAAAC+TGG - chr7_2:77678287-77678306 None:intergenic 40.0%
GAAAAGATTGGAACCAGACT+GGG + chr7_2:77678856-77678875 Msa1078670:CDS 40.0%
AAAAGATTGGAACCAGACTG+GGG + chr7_2:77678857-77678876 Msa1078670:CDS 40.0%
! AAGGCTTTTCTCTGCCATTA+AGG + chr7_2:77678884-77678903 Msa1078670:CDS 40.0%
ACAACGTGCTTCCCAAATTA+GGG + chr7_2:77679087-77679106 Msa1078670:intron 40.0%
CACACATTAACAGGTTTCCT+AGG + chr7_2:77679280-77679299 Msa1078670:intron 40.0%
! AGGAACTTGCTTAAGTTCCT+AGG - chr7_2:77679300-77679319 None:intergenic 40.0%
TAAGCAAGTTCCTTTGAGCT+TGG + chr7_2:77679307-77679326 Msa1078670:intron 40.0%
AAGCAAGTTCCTTTGAGCTT+GGG + chr7_2:77679308-77679327 Msa1078670:intron 40.0%
AATCTCAAACCCAAGCTCAA+AGG - chr7_2:77679320-77679339 None:intergenic 40.0%
ACGCAGTGAAGTCATTAAAG+AGG - chr7_2:77679549-77679568 None:intergenic 40.0%
TTCTACAGGAATGGTGTAGA+AGG - chr7_2:77679641-77679660 None:intergenic 40.0%
TATAAGCCTGGACAATAGCA+CGG - chr7_2:77679854-77679873 None:intergenic 40.0%
TTGTCCAGGCTTATATAACC+AGG + chr7_2:77679859-77679878 Msa1078670:CDS 40.0%
AGTTCCTGGTTATATAAGCC+TGG - chr7_2:77679866-77679885 None:intergenic 40.0%
CAGGTTAACCAAAAAGTTCC+TGG - chr7_2:77679880-77679899 None:intergenic 40.0%
AGTTATGGTATCAGCCTATC+AGG - chr7_2:77680018-77680037 None:intergenic 40.0%
! AACAACAGGTCCTTTTGGTA+AGG - chr7_2:77680063-77680082 None:intergenic 40.0%
CCATCAGGTGAAATAACAAC+AGG - chr7_2:77680077-77680096 None:intergenic 40.0%
!! CCTGTTGTTATTTCACCTGA+TGG + chr7_2:77680074-77680093 Msa1078670:CDS 40.0%
CAAGCAATCTTGAACTCATG+AGG - chr7_2:77680234-77680253 None:intergenic 40.0%
GTTCAAGATTGCTTGTCTAG+AGG + chr7_2:77680239-77680258 Msa1078670:CDS 40.0%
CCATTATAGATGCAGACCTT+AGG - chr7_2:77680496-77680515 None:intergenic 40.0%
CCTAAGGTCTGCATCTATAA+TGG + chr7_2:77680493-77680512 Msa1078670:intron 40.0%
! CAATTTTCATTTGTGGCAGG+AGG + chr7_2:77680768-77680787 Msa1078670:intron 40.0%
GTTGTGGGCTTACAAGTTAG+GGG - chr7_2:77675409-77675428 None:intergenic 45.0%
ACCACCAAAAGGGTGAAAAG+GGG - chr7_2:77675967-77675986 None:intergenic 45.0%
CACCACCAAAAGGGTGAAAA+GGG - chr7_2:77675968-77675987 None:intergenic 45.0%
CATCAACAGCACCACCAAAA+GGG - chr7_2:77675977-77675996 None:intergenic 45.0%
ACATCAACAGCACCACCAAA+AGG - chr7_2:77675978-77675997 None:intergenic 45.0%
ACGCCTTGGTATGTAAGGTT+TGG + chr7_2:77676035-77676054 Msa1078670:CDS 45.0%
! GTATCTTGATAATTCCGGGG+AGG + chr7_2:77676136-77676155 Msa1078670:CDS 45.0%
GACTCAAATGTCCCTGTTGA+AGG + chr7_2:77676200-77676219 Msa1078670:CDS 45.0%
!! TCATAGCGTATCTGATTCGG+GGG + chr7_2:77676292-77676311 Msa1078670:CDS 45.0%
CAAAAGGTGGAATCCGATGT+TGG + chr7_2:77676362-77676381 Msa1078670:CDS 45.0%
AGAGAATGTTGTGGACTTGC+AGG + chr7_2:77676454-77676473 Msa1078670:CDS 45.0%
GAGAATGTTGTGGACTTGCA+GGG + chr7_2:77676455-77676474 Msa1078670:CDS 45.0%
TTCTAATCCGGAGGTGATCT+TGG + chr7_2:77676478-77676497 Msa1078670:CDS 45.0%
! GTGATCTTGGTTAGCGTTGA+CGG + chr7_2:77676491-77676510 Msa1078670:CDS 45.0%
CTCAGAATTAGAGCCAACTG+AGG + chr7_2:77676535-77676554 Msa1078670:CDS 45.0%
TAGAAATCAGTCCCTTCACC+TGG - chr7_2:77676599-77676618 None:intergenic 45.0%
! GAAGGGACTGATTTCTACGA+AGG + chr7_2:77676602-77676621 Msa1078670:CDS 45.0%
! GGCAATGAGGAGTTTAGTTC+TGG + chr7_2:77676623-77676642 Msa1078670:CDS 45.0%
! ACATCAGCTGTTGAAGCATC+CGG - chr7_2:77676683-77676702 None:intergenic 45.0%
TATCGGTAATAGTGCTTCCG+GGG + chr7_2:77676727-77676746 Msa1078670:CDS 45.0%
GTTTCCTCCGTGTGACAAAT+AGG - chr7_2:77676785-77676804 None:intergenic 45.0%
ATTTGTCACACGGAGGAAAC+TGG + chr7_2:77676785-77676804 Msa1078670:CDS 45.0%
CTTGCTCAGCAGGATGATTA+TGG + chr7_2:77676875-77676894 Msa1078670:CDS 45.0%
GAAGAAGTAGCACCACTGAT+GGG - chr7_2:77677031-77677050 None:intergenic 45.0%
TGAAGAAGTAGCACCACTGA+TGG - chr7_2:77677032-77677051 None:intergenic 45.0%
CCATTCCACATCATTCGTAC+CGG - chr7_2:77677146-77677165 None:intergenic 45.0%
TCATTGGAAGTTGCTGTCTG+AGG - chr7_2:77677235-77677254 None:intergenic 45.0%
TCAGACAGCAACTTCCAATG+AGG + chr7_2:77677234-77677253 Msa1078670:CDS 45.0%
CAGACAGCAACTTCCAATGA+GGG + chr7_2:77677235-77677254 Msa1078670:CDS 45.0%
AGACAGCAACTTCCAATGAG+GGG + chr7_2:77677236-77677255 Msa1078670:CDS 45.0%
TTGTGGTCACGAACTTAAGG+CGG + chr7_2:77677399-77677418 Msa1078670:CDS 45.0%
AGCACATCGAATATCTGCTG+AGG + chr7_2:77677456-77677475 Msa1078670:CDS 45.0%
ATTGTATCTTCAGGGGCAAC+AGG - chr7_2:77677610-77677629 None:intergenic 45.0%
CCCTGAAGATACAATTCCTG+TGG + chr7_2:77677615-77677634 Msa1078670:CDS 45.0%
CCCACAGGAATTGTATCTTC+AGG - chr7_2:77677619-77677638 None:intergenic 45.0%
TTCCTGTGGGTCAAGATGAT+AGG + chr7_2:77677629-77677648 Msa1078670:CDS 45.0%
AACCTATCATCTTGACCCAC+AGG - chr7_2:77677634-77677653 None:intergenic 45.0%
AAGTCCAGCGATGATAATCC+TGG + chr7_2:77677655-77677674 Msa1078670:CDS 45.0%
AAGACAGCTGAGCACAATAG+TGG + chr7_2:77677733-77677752 Msa1078670:CDS 45.0%
! CTCCTCGCAAGCAATTTGTT+AGG + chr7_2:77677845-77677864 Msa1078670:CDS 45.0%
GTCCTAACAAATTGCTTGCG+AGG - chr7_2:77677850-77677869 None:intergenic 45.0%
AGTTTCTCTACGAGGGTTCT+AGG + chr7_2:77677937-77677956 Msa1078670:CDS 45.0%
!! GGAAGTGTTGAACAGGGATA+AGG - chr7_2:77678229-77678248 None:intergenic 45.0%
!! GAGTACGGAAGTGTTGAACA+GGG - chr7_2:77678235-77678254 None:intergenic 45.0%
!! TGAGTACGGAAGTGTTGAAC+AGG - chr7_2:77678236-77678255 None:intergenic 45.0%
GGAAAAGATTGGAACCAGAC+TGG + chr7_2:77678855-77678874 Msa1078670:CDS 45.0%
CACAACGTGCTTCCCAAATT+AGG + chr7_2:77679086-77679105 Msa1078670:intron 45.0%
CAACGTGCTTCCCAAATTAG+GGG + chr7_2:77679088-77679107 Msa1078670:intron 45.0%
!! CTAGAAGTGCTTGTTGCATC+TGG + chr7_2:77679211-77679230 Msa1078670:intron 45.0%
TAGAGAGTGAGCTTAAAGCC+TGG + chr7_2:77679343-77679362 Msa1078670:intron 45.0%
AGCAAAAACCAGACTTGACC+AGG - chr7_2:77679364-77679383 None:intergenic 45.0%
ATAAGCCTGGACAATAGCAC+GGG - chr7_2:77679853-77679872 None:intergenic 45.0%
AGGGACGGAAATAATCCATC+AGG - chr7_2:77680092-77680111 None:intergenic 45.0%
TTCCTGACCTTCTCGGTAAA+GGG - chr7_2:77680111-77680130 None:intergenic 45.0%
TGAACACTAATAGGGTGAGG+TGG + chr7_2:77680584-77680603 Msa1078670:intron 45.0%
GTTCAAGCAAAGACGTAGGA+GGG - chr7_2:77680674-77680693 None:intergenic 45.0%
TGTTCAAGCAAAGACGTAGG+AGG - chr7_2:77680675-77680694 None:intergenic 45.0%
TCCTACGTCTTTGCTTGAAC+AGG + chr7_2:77680674-77680693 Msa1078670:CDS 45.0%
ACCTGTTCAAGCAAAGACGT+AGG - chr7_2:77680678-77680697 None:intergenic 45.0%
! ACAGCCTTATCCCACTAAGT+GGG - chr7_2:77680975-77680994 None:intergenic 45.0%
! AACAGCCTTATCCCACTAAG+TGG - chr7_2:77680976-77680995 None:intergenic 45.0%
GCGGCTGTCCAAAATGTTAA+CGG + chr7_2:77681017-77681036 Msa1078670:three_prime_UTR 45.0%
TGGGCTTACAAGTTAGGGGT+TGG - chr7_2:77675405-77675424 None:intergenic 50.0%
! GCTACCCCTTTTCACCCTTT+TGG + chr7_2:77675960-77675979 Msa1078670:CDS 50.0%
! ACCCCTTTTCACCCTTTTGG+TGG + chr7_2:77675963-77675982 Msa1078670:CDS 50.0%
GCACCACCAAAAGGGTGAAA+AGG - chr7_2:77675969-77675988 None:intergenic 50.0%
AGGTGGAATCCGATGTTGGT+CGG + chr7_2:77676366-77676385 Msa1078670:CDS 50.0%
! GGACTTGCAGGGTTCTAATC+CGG + chr7_2:77676466-77676485 Msa1078670:CDS 50.0%
ACGCTAACCAAGATCACCTC+CGG - chr7_2:77676488-77676507 None:intergenic 50.0%
CCTGGTCCCAAGTGAAATTG+AGG - chr7_2:77676581-77676600 None:intergenic 50.0%
CCTCAATTTCACTTGGGACC+AGG + chr7_2:77676578-77676597 Msa1078670:CDS 50.0%
TTTCACTTGGGACCAGGTGA+AGG + chr7_2:77676584-77676603 Msa1078670:CDS 50.0%
TTCACTTGGGACCAGGTGAA+GGG + chr7_2:77676585-77676604 Msa1078670:CDS 50.0%
CTATTTGGCAACCTTCGAGC+TGG - chr7_2:77676754-77676773 None:intergenic 50.0%
GGTGAATCAAAACTCAGCGG+AGG + chr7_2:77676925-77676944 Msa1078670:CDS 50.0%
GGTGAGTTATCTCCCATCAG+TGG + chr7_2:77677016-77677035 Msa1078670:CDS 50.0%
GCATCAGTGGAAGTTGACAC+TGG + chr7_2:77677106-77677125 Msa1078670:CDS 50.0%
!! GTGGAAGTTGACACTGGTTC+TGG + chr7_2:77677112-77677131 Msa1078670:CDS 50.0%
!! ACTGGTTCTGGCATTCGTTC+CGG + chr7_2:77677124-77677143 Msa1078670:CDS 50.0%
TCGTTCCGGTACGAATGATG+TGG + chr7_2:77677138-77677157 Msa1078670:CDS 50.0%
CCGGTACGAATGATGTGGAA+TGG + chr7_2:77677143-77677162 Msa1078670:CDS 50.0%
GACAGCAACTTCCAATGAGG+GGG + chr7_2:77677237-77677256 Msa1078670:CDS 50.0%
!! ATGGCTTTGATCCCCCTCAT+TGG - chr7_2:77677251-77677270 None:intergenic 50.0%
! GAGGGGGATCAAAGCCATTT+TGG + chr7_2:77677253-77677272 Msa1078670:CDS 50.0%
TGTGGTCACGAACTTAAGGC+GGG + chr7_2:77677400-77677419 Msa1078670:CDS 50.0%
TCACGAACTTAAGGCGGGTA+TGG + chr7_2:77677405-77677424 Msa1078670:CDS 50.0%
CACGAACTTAAGGCGGGTAT+GGG + chr7_2:77677406-77677425 Msa1078670:CDS 50.0%
TGGTCCAGGATTATCATCGC+TGG - chr7_2:77677662-77677681 None:intergenic 50.0%
AATCCTGGACCATCTTCGTC+TGG + chr7_2:77677670-77677689 Msa1078670:CDS 50.0%
!! GAGGGTTCTAGGAACACAAC+AGG + chr7_2:77677948-77677967 Msa1078670:CDS 50.0%
GGGAAAGGAAATGCAGGTTC+TGG + chr7_2:77678356-77678375 Msa1078670:intron 50.0%
GGGCAGTTCATGCCTTTAGT+TGG + chr7_2:77678834-77678853 Msa1078670:CDS 50.0%
GCTTAAAGCCTGGTCAAGTC+TGG + chr7_2:77679353-77679372 Msa1078670:intron 50.0%
GGGCACTCAAAAACAGTAGC+TGG - chr7_2:77679833-77679852 None:intergenic 50.0%
TTTCCGTCCCTTTACCGAGA+AGG + chr7_2:77680101-77680120 Msa1078670:CDS 50.0%
TGACCTTCTCGGTAAAGGGA+CGG - chr7_2:77680107-77680126 None:intergenic 50.0%
GTTCCTGACCTTCTCGGTAA+AGG - chr7_2:77680112-77680131 None:intergenic 50.0%
AACCCATTCTATGCGGGGTT+TGG + chr7_2:77680400-77680419 Msa1078670:CDS 50.0%
TGCCAAACCCCGCATAGAAT+GGG - chr7_2:77680405-77680424 None:intergenic 50.0%
TTGCCAAACCCCGCATAGAA+TGG - chr7_2:77680406-77680425 None:intergenic 50.0%
ATGTAGCCAACCCCACTTAG+TGG + chr7_2:77680961-77680980 Msa1078670:three_prime_UTR 50.0%
TGTAGCCAACCCCACTTAGT+GGG + chr7_2:77680962-77680981 Msa1078670:three_prime_UTR 50.0%
CTTATCCCACTAAGTGGGGT+TGG - chr7_2:77680970-77680989 None:intergenic 50.0%
CAACCCCACTTAGTGGGATA+AGG + chr7_2:77680968-77680987 Msa1078670:three_prime_UTR 50.0%
! CAGCCTTATCCCACTAAGTG+GGG - chr7_2:77680974-77680993 None:intergenic 50.0%
! GAACTTTTCGGAGCACGCCT+TGG + chr7_2:77676021-77676040 Msa1078670:CDS 55.0%
GGAGCACGCCTTGGTATGTA+AGG + chr7_2:77676030-77676049 Msa1078670:CDS 55.0%
TCGGGGGCAATTCAGTTGAC+AGG + chr7_2:77676308-77676327 Msa1078670:CDS 55.0%
! CTTGCAGGGTTCTAATCCGG+AGG + chr7_2:77676469-77676488 Msa1078670:CDS 55.0%
GGGACCTATTTGTCACACGG+AGG + chr7_2:77676778-77676797 Msa1078670:CDS 55.0%
CACTCCAAGAACAAGAGGGG+CGG - chr7_2:77677566-77677585 None:intergenic 55.0%
CGCCACTCCAAGAACAAGAG+GGG - chr7_2:77677569-77677588 None:intergenic 55.0%
CCGCCACTCCAAGAACAAGA+GGG - chr7_2:77677570-77677589 None:intergenic 55.0%
CCCTCTTGTTCTTGGAGTGG+CGG + chr7_2:77677567-77677586 Msa1078670:CDS 55.0%
GACCATCTTCGTCTGGACGT+AGG + chr7_2:77677677-77677696 Msa1078670:CDS 55.0%
CACCTACGTCCAGACGAAGA+TGG - chr7_2:77677682-77677701 None:intergenic 55.0%
CATCTTCGTCTGGACGTAGG+TGG + chr7_2:77677680-77677699 Msa1078670:CDS 55.0%
GTTGAGCCATCTCCAACCTC+AGG + chr7_2:77677811-77677830 Msa1078670:CDS 55.0%
AGCCATCTCCAACCTCAGGT+AGG + chr7_2:77677815-77677834 Msa1078670:CDS 55.0%
AGCCTACCTGAGGTTGGAGA+TGG - chr7_2:77677820-77677839 None:intergenic 55.0%
GACTCAAGCCTACCTGAGGT+TGG - chr7_2:77677826-77677845 None:intergenic 55.0%
AGGAGACTCAAGCCTACCTG+AGG - chr7_2:77677830-77677849 None:intergenic 55.0%
AGATTGGAACCAGACTGGGG+TGG + chr7_2:77678860-77678879 Msa1078670:CDS 55.0%
GTCCCTTTACCGAGAAGGTC+AGG + chr7_2:77680106-77680125 Msa1078670:intron 55.0%
GGCAGGAGGACTTCAACTCT+TGG + chr7_2:77680782-77680801 Msa1078670:intron 55.0%
AAGGCCGCCCCTCTTGTTCT+TGG + chr7_2:77677559-77677578 Msa1078670:CDS 60.0%
CGCCCCTCTTGTTCTTGGAG+TGG + chr7_2:77677564-77677583 Msa1078670:CDS 60.0%
GCCGCCACTCCAAGAACAAG+AGG - chr7_2:77677571-77677590 None:intergenic 60.0%
CGTCCAGACGAAGATGGTCC+AGG - chr7_2:77677676-77677695 None:intergenic 60.0%
CTGGACGTAGGTGGAGACTC+TGG + chr7_2:77677689-77677708 Msa1078670:CDS 60.0%
AAAGCCTTGCCACCCCAGTC+TGG - chr7_2:77678872-77678891 None:intergenic 60.0%
! GAGTGCCCGTGCTATTGTCC+AGG + chr7_2:77679845-77679864 Msa1078670:CDS 60.0%
GCAACCTTCGAGCTGGACCC+CGG - chr7_2:77676747-77676766 None:intergenic 65.0%
! AGAGGGGCGGCCTTTTCCCA+TGG - chr7_2:77677553-77677572 None:intergenic 65.0%
GGAACCAGACTGGGGTGGCA+AGG + chr7_2:77678865-77678884 Msa1078670:CDS 65.0%
GCTTCCGGGGTCCAGCTCGA+AGG + chr7_2:77676740-77676759 Msa1078670:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 77675321 77681128 77675321 ID=Msa1078670;Name=Msa1078670
chr7_2 mRNA 77675321 77681128 77675321 ID=Msa1078670-mRNA-1;Parent=Msa1078670;Name=Msa1078670-mRNA-1;_AED=0.08;_eAED=0.08;_QI=389|1|1|1|0.9|0.81|11|288|868
chr7_2 exon 77675321 77675541 77675321 ID=Msa1078670-mRNA-1:exon:19068;Parent=Msa1078670-mRNA-1
chr7_2 exon 77675738 77677280 77675738 ID=Msa1078670-mRNA-1:exon:19069;Parent=Msa1078670-mRNA-1
chr7_2 exon 77677383 77677969 77677383 ID=Msa1078670-mRNA-1:exon:19070;Parent=Msa1078670-mRNA-1
chr7_2 exon 77678067 77678140 77678067 ID=Msa1078670-mRNA-1:exon:19071;Parent=Msa1078670-mRNA-1
chr7_2 exon 77678821 77678905 77678821 ID=Msa1078670-mRNA-1:exon:19072;Parent=Msa1078670-mRNA-1
chr7_2 exon 77679819 77679905 77679819 ID=Msa1078670-mRNA-1:exon:19073;Parent=Msa1078670-mRNA-1
chr7_2 exon 77680050 77680122 77680050 ID=Msa1078670-mRNA-1:exon:19074;Parent=Msa1078670-mRNA-1
chr7_2 exon 77680217 77680260 77680217 ID=Msa1078670-mRNA-1:exon:19075;Parent=Msa1078670-mRNA-1
chr7_2 exon 77680370 77680498 77680370 ID=Msa1078670-mRNA-1:exon:19076;Parent=Msa1078670-mRNA-1
chr7_2 exon 77680597 77680695 77680597 ID=Msa1078670-mRNA-1:exon:19077;Parent=Msa1078670-mRNA-1
chr7_2 exon 77680787 77681128 77680787 ID=Msa1078670-mRNA-1:exon:19078;Parent=Msa1078670-mRNA-1
chr7_2 five_prime_UTR 77675321 77675541 77675321 ID=Msa1078670-mRNA-1:five_prime_utr;Parent=Msa1078670-mRNA-1
chr7_2 five_prime_UTR 77675738 77675905 77675738 ID=Msa1078670-mRNA-1:five_prime_utr;Parent=Msa1078670-mRNA-1
chr7_2 CDS 77675906 77677280 77675906 ID=Msa1078670-mRNA-1:cds;Parent=Msa1078670-mRNA-1
chr7_2 CDS 77677383 77677969 77677383 ID=Msa1078670-mRNA-1:cds;Parent=Msa1078670-mRNA-1
chr7_2 CDS 77678067 77678140 77678067 ID=Msa1078670-mRNA-1:cds;Parent=Msa1078670-mRNA-1
chr7_2 CDS 77678821 77678905 77678821 ID=Msa1078670-mRNA-1:cds;Parent=Msa1078670-mRNA-1
chr7_2 CDS 77679819 77679905 77679819 ID=Msa1078670-mRNA-1:cds;Parent=Msa1078670-mRNA-1
chr7_2 CDS 77680050 77680122 77680050 ID=Msa1078670-mRNA-1:cds;Parent=Msa1078670-mRNA-1
chr7_2 CDS 77680217 77680260 77680217 ID=Msa1078670-mRNA-1:cds;Parent=Msa1078670-mRNA-1
chr7_2 CDS 77680370 77680498 77680370 ID=Msa1078670-mRNA-1:cds;Parent=Msa1078670-mRNA-1
chr7_2 CDS 77680597 77680695 77680597 ID=Msa1078670-mRNA-1:cds;Parent=Msa1078670-mRNA-1
chr7_2 CDS 77680787 77680840 77680787 ID=Msa1078670-mRNA-1:cds;Parent=Msa1078670-mRNA-1
chr7_2 three_prime_UTR 77680841 77681128 77680841 ID=Msa1078670-mRNA-1:three_prime_utr;Parent=Msa1078670-mRNA-1
Gene Sequence

>Msa1078670

ATGAATGTGGTGGGAAAATTTGGAACCTTGATAACTAAGGGTGTTTATTCAGTTGCTACCCCTTTTCACCCTTTTGGTGGTGCTGTTGATGTCATTGTTGTTCAGCAACAAGATGGAACTTTTCGGAGCACGCCTTGGTATGTAAGGTTTGGTAAATTTCAAGGTGTTCTCAAAGGTGCCGAGAAGATTGTGAAGATAAATGTTAATGGGGTTGAAGCGAATTTTCATATGTATCTTGATAATTCCGGGGAGGCTTATTTTGTAAAAGAGGTGGATGAGGATGATAAAAGTGTTGACTCAAATGTCCCTGTTGAAGGTGTTACTAACTCTGAGTTTACTTCTGAAGACGGTAGTGTTGAAATTGATATTACTGGTCATAGACTTGATCATAGCGTATCTGATTCGGGGGCAATTCAGTTGACAGGTGAAGATCATTCTTCAGTTTTGCCAGAACTTCAAAAGGTGGAATCCGATGTTGGTCGGACATTTTATGATTTTGAAGATGATCAACCAACAATTGAAGATTCGGCTGATTTGTCAGAATATGGAGAGAATGTTGTGGACTTGCAGGGTTCTAATCCGGAGGTGATCTTGGTTAGCGTTGACGGTCATATATTGACAGCCCCTATCTCAGAATTAGAGCCAACTGAGGAAAATTTGCAGTCACAAATTCCTCAATTTCACTTGGGACCAGGTGAAGGGACTGATTTCTACGAAGGCAATGAGGAGTTTAGTTCTGGTGAAAATGCAAGTGTTGCTGATTATGTTAGTAGGCCGGATGCTTCAACAGCTGATGTTCCTTCCAGTATTTATAGCTCTGATATCGGTAATAGTGCTTCCGGGGTCCAGCTCGAAGGTTGCCAAATAGAAAAGGGACCTATTTGTCACACGGAGGAAACTGGCACAGAAGAAGCTGCATCATGCATGAATTCGGAGAGTGTTTTCAAAAGTTGCTTGGACTTAAATGAACTTGCTCAGCAGGATGATTATGGCAATTTACAAGATGAAAGGTCCTCATTGGTGAATCAAAACTCAGCGGAGGAATCTAATGAAAATTGTTCAAATGTTGATGAAAATGCAAAAGAGAGCATTAAACAATTTAGAAATATTGGTGAGTTATCTCCCATCAGTGGTGCTACTTCTTCAGACGACAGTAATTCTACAAATTTAAAATCAGAATTTCAAGGGGTTGATAAAGATGCATCAGTGGAAGTTGACACTGGTTCTGGCATTCGTTCCGGTACGAATGATGTGGAATGGAATGATAGTAATAGTCAAGAAACCACTGTACTTGAAATTATTAGTGAGGAAGATAATATAACAGCACCTCAGACAGCAACTTCCAATGAGGGGGATCAAAGCCATTTTGGTTTGAAATTTGATATCTCACTTTGTGGTCACGAACTTAAGGCGGGTATGGGTTTTATCGCTGCTGCTGAAGTGTTTGAAGCACATCGAATATCTGCTGAGGAATTTAGAGTCTCTGCGCCATCTATAACTAAGAATAAAAATCTTGTTTTGAAGTTCAGAGAGAGTTATCTACCATGGGAAAAGGCCGCCCCTCTTGTTCTTGGAGTGGCGGCATTTGATTTAGACTTACCTGTTGCCCCTGAAGATACAATTCCTGTGGGTCAAGATGATAGGTTGAAGTCCAGCGATGATAATCCTGGACCATCTTCGTCTGGACGTAGGTGGAGACTCTGGCCTCTTGCTTTTCGAAAAGTGAAGACAGCTGAGCACAATAGTGGTGATGAATCAAGTGAGGATATATTTCTAGATTCCGAATCTGATTTGTTTGGCTCTGTTGAGCCATCTCCAACCTCAGGTAGGCTTGAGTCTCCTCGCAAGCAATTTGTTAGGACAAATGTTCCCTCTAATGAGATGATAGCATCATTGAATCTCAAAGATGGTCAAAATATGGTAACATTCAGTTTCTCTACGAGGGTTCTAGGAACACAACAGGTTGATGCTCATATATATTTATGGAAGTGGAACGCAAGAATTGTAATTTCAGATGTGGATGGAACTATTACCAAATCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGAAAAGATTGGAACCAGACTGGGGTGGCAAGGCTTTTCTCTGCCATTAAGGAAAATGGATACCAGCTACTGTTTTTGAGTGCCCGTGCTATTGTCCAGGCTTATATAACCAGGAACTTTTTGGTTAACCTGAAACAGGATGGAAAAACCTTACCAAAAGGACCTGTTGTTATTTCACCTGATGGATTATTTCCGTCCCTTTACCGAGAAGTAATAAAAAGAGCTCCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAACCCATTCTATGCGGGGTTTGGCAATAGAGACACAGATGAACTTAGTTACAGTAAAATAGGAATTCCAAAGGGAAAAATATTTATCATTAACCCTAAGGGTGAGGTGGCAATAAGTCATCGTATCGATGCAAAATCTTATACATCACTACACACACTCGTCAATGACATGTTCCCTCCTACGTCTTTGCTTGAACAGGAGGACTTCAACTCTTGGAATTATTGGAGAGTGCCTATGCCAGATATTGATTAG
Protein sequence

>Msa1078670

MNVVGKFGTLITKGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKIVKINVNGVEANFHMYLDNSGEAYFVKEVDEDDKSVDSNVPVEGVTNSEFTSEDGSVEIDITGHRLDHSVSDSGAIQLTGEDHSSVLPELQKVESDVGRTFYDFEDDQPTIEDSADLSEYGENVVDLQGSNPEVILVSVDGHILTAPISELEPTEENLQSQIPQFHLGPGEGTDFYEGNEEFSSGENASVADYVSRPDASTADVPSSIYSSDIGNSASGVQLEGCQIEKGPICHTEETGTEEAASCMNSESVFKSCLDLNELAQQDDYGNLQDERSSLVNQNSAEESNENCSNVDENAKESIKQFRNIGELSPISGATSSDDSNSTNLKSEFQGVDKDASVEVDTGSGIRSGTNDVEWNDSNSQETTVLEIISEEDNITAPQTATSNEGDQSHFGLKFDISLCGHELKAGMGFIAAAEVFEAHRISAEEFRVSAPSITKNKNLVLKFRESYLPWEKAAPLVLGVAAFDLDLPVAPEDTIPVGQDDRLKSSDDNPGPSSSGRRWRLWPLAFRKVKTAEHNSGDESSEDIFLDSESDLFGSVEPSPTSGRLESPRKQFVRTNVPSNEMIASLNLKDGQNMVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWNQTGVARLFSAIKENGYQLLFLSARAIVQAYITRNFLVNLKQDGKTLPKGPVVISPDGLFPSLYREVIKRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYSKIGIPKGKIFIINPKGEVAISHRIDAKSYTSLHTLVNDMFPPTSLLEQEDFNSWNYWRVPMPDID*