Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079970 | RHN48604.1 | 97.635 | 296 | 7 | 0 | 1 | 296 | 73 | 368 | 0.0 | 608 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079970 | sp|Q9LF92|P2A15_ARATH | 69.231 | 299 | 88 | 3 | 1 | 296 | 1 | 298 | 3.51e-154 | 435 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079970 | A0A396H9X4 | 97.635 | 296 | 7 | 0 | 1 | 296 | 73 | 368 | 0.0 | 608 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0087250 | Msa1079970 | 0.810090 | 1.369925e-50 | -8.615850e-47 |
| Msa0192470 | Msa1079970 | 0.809692 | 1.668569e-50 | -8.615850e-47 |
| Msa1042130 | Msa1079970 | 0.833034 | 6.724385e-56 | -8.615850e-47 |
| Msa1079970 | Msa1124880 | 0.833132 | 6.356350e-56 | -8.615850e-47 |
| Msa1079970 | Msa1167500 | 0.820951 | 5.229716e-53 | -8.615850e-47 |
| Msa1079970 | Msa1342280 | 0.802730 | 4.883153e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079970 | MtrunA17_Chr7g0265551 | 97.635 | 296 | 7 | 0 | 1 | 296 | 73 | 368 | 0.0 | 608 |
| Msa1079970 | MtrunA17_Chr5g0397981 | 54.983 | 291 | 116 | 4 | 1 | 290 | 19 | 295 | 1.69e-112 | 327 |
| Msa1079970 | MtrunA17_Chr4g0057281 | 57.143 | 273 | 105 | 2 | 19 | 290 | 19 | 280 | 1.40e-109 | 319 |
| Msa1079970 | MtrunA17_Chr1g0203751 | 52.685 | 298 | 121 | 2 | 1 | 289 | 1 | 287 | 3.81e-109 | 318 |
| Msa1079970 | MtrunA17_Chr8g0350401 | 53.767 | 292 | 116 | 3 | 1 | 284 | 1 | 281 | 5.75e-108 | 315 |
| Msa1079970 | MtrunA17_Chr6g0472801 | 47.260 | 292 | 140 | 2 | 1 | 289 | 1 | 281 | 3.69e-98 | 290 |
| Msa1079970 | MtrunA17_Chr7g0272101 | 31.618 | 272 | 157 | 8 | 22 | 283 | 4 | 256 | 7.53e-34 | 124 |
| Msa1079970 | MtrunA17_Chr4g0010881 | 31.086 | 267 | 153 | 7 | 22 | 287 | 4 | 240 | 1.75e-32 | 120 |
| Msa1079970 | MtrunA17_Chr1g0189721 | 26.354 | 277 | 176 | 6 | 19 | 283 | 4 | 264 | 2.33e-30 | 115 |
| Msa1079970 | MtrunA17_Chr1g0203281 | 26.241 | 282 | 173 | 6 | 21 | 283 | 6 | 271 | 7.47e-29 | 111 |
| Msa1079970 | MtrunA17_Chr1g0189671 | 26.481 | 287 | 176 | 6 | 18 | 285 | 3 | 273 | 1.55e-28 | 110 |
| Msa1079970 | MtrunA17_Chr1g0192371 | 25.862 | 290 | 175 | 8 | 18 | 283 | 7 | 280 | 3.18e-27 | 107 |
| Msa1079970 | MtrunA17_Chr1g0189611 | 25.818 | 275 | 176 | 7 | 21 | 283 | 6 | 264 | 4.38e-27 | 106 |
| Msa1079970 | MtrunA17_Chr1g0189621 | 26.715 | 277 | 170 | 11 | 21 | 283 | 6 | 263 | 2.01e-26 | 104 |
| Msa1079970 | MtrunA17_Chr1g0189821 | 24.727 | 275 | 184 | 6 | 21 | 285 | 6 | 267 | 3.64e-26 | 103 |
| Msa1079970 | MtrunA17_Chr1g0189591 | 37.762 | 143 | 86 | 2 | 21 | 160 | 15 | 157 | 8.30e-26 | 103 |
| Msa1079970 | MtrunA17_Chr1g0189751 | 26.715 | 277 | 175 | 7 | 19 | 283 | 4 | 264 | 1.77e-25 | 102 |
| Msa1079970 | MtrunA17_Chr7g0272091 | 24.742 | 291 | 180 | 7 | 18 | 283 | 6 | 282 | 8.34e-25 | 100 |
| Msa1079970 | MtrunA17_Chr1g0189641 | 24.823 | 282 | 178 | 6 | 21 | 283 | 6 | 272 | 6.28e-24 | 98.2 |
| Msa1079970 | MtrunA17_Chr1g0203331 | 26.971 | 241 | 140 | 5 | 35 | 253 | 5 | 231 | 1.54e-23 | 96.7 |
| Msa1079970 | MtrunA17_Chr3g0097191 | 25.182 | 274 | 179 | 5 | 19 | 283 | 10 | 266 | 3.78e-22 | 93.2 |
| Msa1079970 | MtrunA17_Chr1g0190071 | 24.490 | 294 | 176 | 8 | 21 | 285 | 6 | 282 | 4.51e-21 | 90.5 |
| Msa1079970 | MtrunA17_Chr1g0189771 | 32.414 | 145 | 95 | 2 | 22 | 163 | 15 | 159 | 7.71e-21 | 87.4 |
| Msa1079970 | MtrunA17_Chr1g0189781 | 31.757 | 148 | 92 | 3 | 22 | 163 | 11 | 155 | 1.61e-19 | 86.3 |
| Msa1079970 | MtrunA17_Chr3g0095261 | 24.286 | 280 | 190 | 7 | 19 | 283 | 10 | 282 | 2.02e-17 | 80.5 |
| Msa1079970 | MtrunA17_Chr7g0260801 | 25.177 | 282 | 175 | 8 | 21 | 290 | 18 | 275 | 1.21e-16 | 78.2 |
| Msa1079970 | MtrunA17_Chr1g0189661 | 25.965 | 285 | 180 | 8 | 21 | 285 | 6 | 279 | 4.05e-16 | 77.0 |
| Msa1079970 | MtrunA17_Chr1g0189711 | 24.514 | 257 | 158 | 8 | 18 | 253 | 3 | 244 | 6.59e-14 | 70.5 |
| Msa1079970 | MtrunA17_Chr3g0078331 | 22.685 | 216 | 141 | 5 | 21 | 223 | 19 | 221 | 6.16e-13 | 68.2 |
| Msa1079970 | MtrunA17_Chr1g0189541 | 26.667 | 180 | 101 | 6 | 115 | 283 | 24 | 183 | 7.84e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079970 | AT3G53000.1 | 69.231 | 299 | 88 | 3 | 1 | 296 | 1 | 298 | 3.57e-155 | 435 |
| Msa1079970 | AT3G61060.1 | 56.554 | 267 | 106 | 1 | 19 | 285 | 25 | 281 | 3.07e-110 | 321 |
| Msa1079970 | AT3G61060.2 | 56.716 | 268 | 105 | 2 | 19 | 285 | 25 | 282 | 5.99e-109 | 318 |
| Msa1079970 | AT1G12710.1 | 52.475 | 303 | 114 | 5 | 1 | 289 | 1 | 287 | 1.39e-106 | 312 |
| Msa1079970 | AT1G63090.1 | 51.916 | 287 | 125 | 3 | 4 | 289 | 11 | 285 | 3.56e-98 | 290 |
| Msa1079970 | AT1G12710.2 | 46.087 | 345 | 114 | 6 | 1 | 289 | 1 | 329 | 4.42e-98 | 292 |
| Msa1079970 | AT5G52120.1 | 45.455 | 297 | 136 | 3 | 8 | 289 | 1 | 286 | 1.72e-90 | 271 |
| Msa1079970 | AT2G02360.1 | 26.667 | 270 | 176 | 7 | 23 | 286 | 18 | 271 | 1.18e-27 | 108 |
| Msa1079970 | AT2G02340.1 | 27.425 | 299 | 178 | 10 | 9 | 287 | 26 | 305 | 6.14e-27 | 107 |
| Msa1079970 | AT2G02240.1 | 26.599 | 297 | 180 | 9 | 5 | 285 | 44 | 318 | 2.98e-26 | 105 |
| Msa1079970 | AT2G02230.1 | 36.424 | 151 | 88 | 3 | 14 | 162 | 27 | 171 | 8.26e-26 | 105 |
| Msa1079970 | AT1G09155.1 | 26.846 | 298 | 177 | 10 | 22 | 291 | 3 | 287 | 4.63e-25 | 102 |
| Msa1079970 | AT1G80110.1 | 23.810 | 273 | 182 | 5 | 19 | 283 | 1 | 255 | 2.33e-23 | 96.7 |
| Msa1079970 | AT2G02250.1 | 34.395 | 157 | 96 | 4 | 10 | 163 | 36 | 188 | 5.28e-23 | 96.7 |
| Msa1079970 | AT5G24560.1 | 32.143 | 140 | 91 | 1 | 21 | 160 | 5 | 140 | 3.69e-22 | 92.0 |
| Msa1079970 | AT2G02350.2 | 30.464 | 151 | 100 | 3 | 10 | 159 | 15 | 161 | 6.26e-22 | 93.6 |
| Msa1079970 | AT2G02310.1 | 25.714 | 280 | 176 | 9 | 21 | 287 | 47 | 307 | 5.14e-21 | 91.3 |
| Msa1079970 | AT1G56240.1 | 25.170 | 294 | 179 | 7 | 22 | 287 | 4 | 284 | 1.98e-20 | 89.4 |
| Msa1079970 | AT1G56250.1 | 25.172 | 290 | 176 | 7 | 22 | 283 | 4 | 280 | 6.96e-20 | 87.8 |
| Msa1079970 | AT2G02320.1 | 24.579 | 297 | 188 | 10 | 4 | 285 | 25 | 300 | 6.60e-19 | 85.5 |
| Msa1079970 | AT2G02300.1 | 33.117 | 154 | 96 | 4 | 11 | 163 | 28 | 175 | 5.58e-17 | 79.7 |
| Msa1079970 | AT4G19840.1 | 30.603 | 232 | 124 | 11 | 62 | 285 | 44 | 246 | 1.19e-12 | 67.0 |
Find 100 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTTGTTAAGGTAATTT+AGG | 0.218817 | 7_2:-79225317 | Msa1079970:three_prime_UTR |
| AAGATCCCAACAAAGTATTA+TGG | 0.237327 | 7_2:+79225349 | None:intergenic |
| ACTCGCTCGCGTGCGTGTTA+TGG | 0.238373 | 7_2:-79228116 | Msa1079970:exon |
| AACAGCGAAAATATCTTTCT+TGG | 0.244190 | 7_2:+79227847 | None:intergenic |
| TAGTTGTCGTTGAAATAATT+TGG | 0.246489 | 7_2:+79228195 | None:intergenic |
| GCGAAAGGTTTGTCTATTAC+TGG | 0.248170 | 7_2:-79227653 | Msa1079970:CDS |
| TCAACGTTCTTCTCTTACTA+TGG | 0.253730 | 7_2:-79228155 | Msa1079970:five_prime_UTR |
| CTGCTTCCGCTGATTCCGTT+TGG | 0.279164 | 7_2:-79227943 | Msa1079970:CDS |
| TGCTTCCGCTGATTCCGTTT+GGG | 0.281862 | 7_2:-79227942 | Msa1079970:CDS |
| CTAACTATCAACATCTTCTA+AGG | 0.282361 | 7_2:-79227904 | Msa1079970:CDS |
| TTCCGACAGCGTAGTTCTTC+GGG | 0.292375 | 7_2:+79227875 | None:intergenic |
| TAGCATATTTGCAGCAAATA+TGG | 0.292809 | 7_2:-79225854 | Msa1079970:CDS |
| TTGTGGCTTGATAGGGTTAC+TGG | 0.305604 | 7_2:-79227698 | Msa1079970:CDS |
| ATAATTATACTCTCTCCTTT+AGG | 0.320102 | 7_2:-79225788 | Msa1079970:CDS |
| GGTGCTTCGTTGTCGAATCT+TGG | 0.327372 | 7_2:-79228094 | Msa1079970:CDS |
| ATTCCGACAGCGTAGTTCTT+CGG | 0.334823 | 7_2:+79227874 | None:intergenic |
| TTTGATCCCAACCATGGGTT+TGG | 0.336939 | 7_2:+79225712 | None:intergenic |
| TACGCGCCGACCGAGTCTTT+TGG | 0.340105 | 7_2:+79225746 | None:intergenic |
| TAGGATTTGCATGTCAATTT+CGG | 0.348575 | 7_2:-79227675 | Msa1079970:CDS |
| GCAATCATAAGCGTGGATAT+TGG | 0.361605 | 7_2:-79225599 | Msa1079970:CDS |
| CAATCATAAGCGTGGATATT+GGG | 0.364455 | 7_2:-79225598 | Msa1079970:CDS |
| TGCAGCAATTGTGGCTTGAT+AGG | 0.373892 | 7_2:-79227706 | Msa1079970:intron |
| ACCGTTTGATGATGGTAATA+AGG | 0.383826 | 7_2:-79227810 | Msa1079970:intron |
| TGTACAGTCAATCTGTTTCA+TGG | 0.389000 | 7_2:+79225512 | None:intergenic |
| AGATCCCAACAAAGTATTAT+GGG | 0.399190 | 7_2:+79225350 | None:intergenic |
| ATATCCCATAATACTTTGTT+GGG | 0.402777 | 7_2:-79225354 | Msa1079970:three_prime_UTR |
| AATATCCCATAATACTTTGT+TGG | 0.403732 | 7_2:-79225355 | Msa1079970:three_prime_UTR |
| GAATTGATGATCGGAGATAC+TGG | 0.406343 | 7_2:-79227631 | Msa1079970:CDS |
| AGAAGATGTTGATAGTTAGA+AGG | 0.406652 | 7_2:+79227908 | None:intergenic |
| TTACACAGCTACCTTTGTTA+AGG | 0.413923 | 7_2:-79225326 | Msa1079970:three_prime_UTR |
| TCAGGGATGTCGCCGAGACT+TGG | 0.421026 | 7_2:+79228049 | None:intergenic |
| GGGTTCCTACTGAAGAATCT+AGG | 0.427818 | 7_2:-79227604 | Msa1079970:intron |
| GAAATGATCAGACATAGAAT+AGG | 0.429253 | 7_2:-79225409 | Msa1079970:exon |
| TCATTTCCCTGCTGTTCCAT+AGG | 0.448267 | 7_2:-79225226 | Msa1079970:three_prime_UTR |
| GTGGTGTGGGAACATGTTAT+TGG | 0.449768 | 7_2:+79228259 | None:intergenic |
| GTATAATTATCAGCAGGAAA+TGG | 0.451382 | 7_2:+79225801 | None:intergenic |
| GCGAGCTAAGTTACAAATCT+CGG | 0.453621 | 7_2:+79227988 | None:intergenic |
| GTAGGTGAGTTTATTGTGAC+TGG | 0.455214 | 7_2:-79225564 | Msa1079970:CDS |
| GCTGTCAACTTCAGATGGTC+AGG | 0.460205 | 7_2:-79225673 | Msa1079970:CDS |
| ATGATCGGAGATACTGGACT+TGG | 0.466267 | 7_2:-79227625 | Msa1079970:CDS |
| AAATGATCAGACATAGAATA+GGG | 0.473844 | 7_2:-79225408 | Msa1079970:exon |
| AAAGCTGAGTTGGTATGATT+TGG | 0.475575 | 7_2:+79228235 | None:intergenic |
| CTCTCCTTTAGGCTTCACCT+TGG | 0.478658 | 7_2:-79225777 | Msa1079970:CDS |
| TGACAAACCTATGGAACAGC+AGG | 0.479145 | 7_2:+79225219 | None:intergenic |
| TGGTATGATTTGGTGTGGTG+TGG | 0.482664 | 7_2:+79228245 | None:intergenic |
| AGCATCATCTGAGTGCTGCT+TGG | 0.485935 | 7_2:-79225649 | Msa1079970:CDS |
| GCAGCAATTGTGGCTTGATA+GGG | 0.487718 | 7_2:-79227705 | Msa1079970:intron |
| TAAGGTAATTTAGGATGTGA+TGG | 0.489704 | 7_2:-79225308 | Msa1079970:three_prime_UTR |
| GTTGACAGCTTAAATATGAC+TGG | 0.492659 | 7_2:+79225687 | None:intergenic |
| TTACCATCATCAAACGGTAA+AGG | 0.493520 | 7_2:+79227815 | None:intergenic |
| TGGAGCGATGGTTGAACCGT+TGG | 0.500130 | 7_2:+79228069 | None:intergenic |
| AAACCTTTACCGTTTGATGA+TGG | 0.507236 | 7_2:-79227818 | Msa1079970:CDS |
| TGCATGTCAATTTCGGCGAA+AGG | 0.507247 | 7_2:-79227668 | Msa1079970:CDS |
| CTATGACCAAACCCATGGTT+GGG | 0.510948 | 7_2:-79225718 | Msa1079970:CDS |
| GGTATGATTTGGTGTGGTGT+GGG | 0.511687 | 7_2:+79228246 | None:intergenic |
| CGAGCTAAGTTACAAATCTC+GGG | 0.515282 | 7_2:+79227989 | None:intergenic |
| TCAACCATCGCTCCAAGTCT+CGG | 0.520611 | 7_2:-79228061 | Msa1079970:CDS |
| AATTTCATCTGACAAACCTA+TGG | 0.523446 | 7_2:+79225210 | None:intergenic |
| ATTGACTGTACACATTCAAA+AGG | 0.523702 | 7_2:-79225501 | Msa1079970:CDS |
| TTGAGAGACCGCAAGGGAGG+CGG | 0.525474 | 7_2:-79225438 | Msa1079970:CDS |
| ATATGGTGGTTTGAAGTGGA+TGG | 0.529067 | 7_2:-79225837 | Msa1079970:CDS |
| TATGGTGGTTTGAAGTGGAT+GGG | 0.530496 | 7_2:-79225836 | Msa1079970:CDS |
| GAGAGAGTATAATTATCAGC+AGG | 0.530526 | 7_2:+79225795 | None:intergenic |
| ATGTAAATGTAAAGCTGAGT+TGG | 0.530610 | 7_2:+79228225 | None:intergenic |
| TCGTCCAAGGTGAAGCCTAA+AGG | 0.536499 | 7_2:+79225773 | None:intergenic |
| TTGCGGTCTCTCAACTCGCT+AGG | 0.541840 | 7_2:+79225447 | None:intergenic |
| TATTGGGTAGATTACAAGGT+AGG | 0.543853 | 7_2:-79225582 | Msa1079970:CDS |
| ACCTTATTACCATCATCAAA+CGG | 0.548291 | 7_2:+79227809 | None:intergenic |
| GTTATTGGCGTCAACATCAA+AGG | 0.548839 | 7_2:+79228274 | None:intergenic |
| TTGTCGAATCTTGGATCCAA+CGG | 0.552308 | 7_2:-79228085 | Msa1079970:CDS |
| GCTATGACCAAACCCATGGT+TGG | 0.552394 | 7_2:-79225719 | Msa1079970:CDS |
| TTTAAGCTGTCAACTTCAGA+TGG | 0.554061 | 7_2:-79225678 | Msa1079970:CDS |
| CTATTACTGGAATTGATGAT+CGG | 0.557562 | 7_2:-79227640 | Msa1079970:CDS |
| TTGTCGTTGAAATAATTTGG+TGG | 0.561692 | 7_2:+79228198 | None:intergenic |
| TGGATATTGGGTAGATTACA+AGG | 0.571903 | 7_2:-79225586 | Msa1079970:CDS |
| CATATTTGCAGCAAATATGG+TGG | 0.572697 | 7_2:-79225851 | Msa1079970:CDS |
| GGCTTGATAGGGTTACTGGT+AGG | 0.574069 | 7_2:-79227694 | Msa1079970:CDS |
| GCAAATATGGTGGTTTGAAG+TGG | 0.575682 | 7_2:-79225841 | Msa1079970:CDS |
| TAGCGAGTTGAGAGACCGCA+AGG | 0.584165 | 7_2:-79225445 | Msa1079970:CDS |
| ATGGTGGTTTGAAGTGGATG+GGG | 0.588532 | 7_2:-79225835 | Msa1079970:CDS |
| GTCGCCGAGACTTGGAGCGA+TGG | 0.591097 | 7_2:+79228057 | None:intergenic |
| TGTAACCTAGATTCTTCAGT+AGG | 0.600640 | 7_2:+79227599 | None:intergenic |
| AGGTAACTTAGATTCCCAAA+CGG | 0.601089 | 7_2:+79227928 | None:intergenic |
| ACTGTCCACGATGATACATA+CGG | 0.613314 | 7_2:-79225621 | Msa1079970:CDS |
| GAGTTGAGAGACCGCAAGGG+AGG | 0.616169 | 7_2:-79225441 | Msa1079970:CDS |
| TGAGTTGGTATGATTTGGTG+TGG | 0.618701 | 7_2:+79228240 | None:intergenic |
| TGCAGCTATGACCAAACCCA+TGG | 0.624730 | 7_2:-79225723 | Msa1079970:CDS |
| ATCCTAAATTACCTTAACAA+AGG | 0.629176 | 7_2:+79225315 | None:intergenic |
| GTGGTTTGAAGTGGATGGGG+AGG | 0.629340 | 7_2:-79225832 | Msa1079970:CDS |
| TGCCCGAAGAACTACGCTGT+CGG | 0.632314 | 7_2:-79227877 | Msa1079970:CDS |
| GACTGTACACATTCAAAAGG+TGG | 0.636157 | 7_2:-79225498 | Msa1079970:CDS |
| TGATCGGAGATACTGGACTT+GGG | 0.644140 | 7_2:-79227624 | Msa1079970:CDS |
| AGCGAGTTGAGAGACCGCAA+GGG | 0.651355 | 7_2:-79225444 | Msa1079970:CDS |
| AGATTCCCAAACGGAATCAG+CGG | 0.656920 | 7_2:+79227937 | None:intergenic |
| ACATACGGCAATCATAAGCG+TGG | 0.659891 | 7_2:-79225606 | Msa1079970:CDS |
| GACAAACCTATGGAACAGCA+GGG | 0.684207 | 7_2:+79225220 | None:intergenic |
| GATTGCCGTATGTATCATCG+TGG | 0.696598 | 7_2:+79225616 | None:intergenic |
| GCTAAGTTACAAATCTCGGG+AGG | 0.700399 | 7_2:+79227992 | None:intergenic |
| TAAATACAGAATCTACACAA+AGG | 0.700993 | 7_2:+79225475 | None:intergenic |
| TGGGATATTTGACATCACCA+AGG | 0.706573 | 7_2:+79225369 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTAATTAAAAACAAGTATT+GGG | + | chr7_2:79225987-79226006 | None:intergenic | 15.0% |
| !! | TTGTAATTAAAAACAAGTAT+TGG | + | chr7_2:79225988-79226007 | None:intergenic | 15.0% |
| !! | TTTCATAAGTTAAATTAAGA+TGG | - | chr7_2:79226126-79226145 | Msa1079970:intron | 15.0% |
| !! | AATTAAGATGGAAATATTAT+TGG | - | chr7_2:79226138-79226157 | Msa1079970:intron | 15.0% |
| !!! | AAAAAATATGTTGACTTTTA+AGG | - | chr7_2:79226563-79226582 | Msa1079970:intron | 15.0% |
| !!! | TTGTAAACTTAATTTTCAAT+GGG | - | chr7_2:79226761-79226780 | Msa1079970:intron | 15.0% |
| !! | GTTTATTGTTTCAAATCATT+CGG | - | chr7_2:79225704-79225723 | Msa1079970:CDS | 20.0% |
| !!! | TTTTTATTGATGATGGAATT+AGG | - | chr7_2:79225731-79225750 | Msa1079970:CDS | 20.0% |
| !! | ATTACAAGACTTGAAATATT+TGG | + | chr7_2:79226279-79226298 | None:intergenic | 20.0% |
| !!! | TTAAATTCTTTTAATCCAAG+AGG | - | chr7_2:79226436-79226455 | Msa1079970:intron | 20.0% |
| !!! | GTTGTAAACTTAATTTTCAA+TGG | - | chr7_2:79226760-79226779 | Msa1079970:intron | 20.0% |
| !! | AATTCAATTGAACTGTTAAT+TGG | - | chr7_2:79226849-79226868 | Msa1079970:intron | 20.0% |
| !! | ATTCAATTGAACTGTTAATT+GGG | - | chr7_2:79226850-79226869 | Msa1079970:intron | 20.0% |
| !! | TTAATAAAACATCAACATGT+AGG | - | chr7_2:79227363-79227382 | Msa1079970:intron | 20.0% |
| !! | TTTCTATTATCATTCATTTC+AGG | - | chr7_2:79227577-79227596 | Msa1079970:intron | 20.0% |
| !!! | GAGTTTTTTTTTTTTTACCT+TGG | - | chr7_2:79228078-79228097 | Msa1079970:CDS | 20.0% |
| ! | TAGTTGTCGTTGAAATAATT+TGG | + | chr7_2:79225272-79225291 | None:intergenic | 25.0% |
| !!! | CGGTTTATTTTTATTGATGA+TGG | - | chr7_2:79225724-79225743 | Msa1079970:CDS | 25.0% |
| !!! | CTTTTTCTCACATTTAAAGT+TGG | - | chr7_2:79225946-79225965 | Msa1079970:intron | 25.0% |
| !!! | TAATTTTTGAGAGCATGTTT+GGG | - | chr7_2:79226011-79226030 | Msa1079970:intron | 25.0% |
| ! | AGTTTATTTACAGTTTAGCT+AGG | + | chr7_2:79226235-79226254 | None:intergenic | 25.0% |
| ! | ACTTGAAATATTTGGATCTT+AGG | + | chr7_2:79226271-79226290 | None:intergenic | 25.0% |
| !!! | TTGCTTGTAATTTTGAGAAA+AGG | - | chr7_2:79226389-79226408 | Msa1079970:intron | 25.0% |
| !!! | TGCTTGTAATTTTGAGAAAA+GGG | - | chr7_2:79226390-79226409 | Msa1079970:intron | 25.0% |
| ! | ACTCTTGAATATAGTCTTTA+TGG | - | chr7_2:79226486-79226505 | Msa1079970:intron | 25.0% |
| ! | TTGAATATAGTCTTTATGGT+TGG | - | chr7_2:79226490-79226509 | Msa1079970:intron | 25.0% |
| ! | GATAGACAAATTATTGTAAG+AGG | - | chr7_2:79227234-79227253 | Msa1079970:intron | 25.0% |
| !!! | ATTGGAATAGTTTTACGAAT+GGG | + | chr7_2:79227444-79227463 | None:intergenic | 25.0% |
| ! | ATAATTATACTCTCTCCTTT+AGG | - | chr7_2:79227676-79227695 | Msa1079970:CDS | 25.0% |
| ! | TAAATACAGAATCTACACAA+AGG | + | chr7_2:79227992-79228011 | None:intergenic | 25.0% |
| ! | AAATGATCAGACATAGAATA+GGG | - | chr7_2:79228056-79228075 | Msa1079970:CDS | 25.0% |
| ! | AATATCCCATAATACTTTGT+TGG | - | chr7_2:79228109-79228128 | Msa1079970:exon | 25.0% |
| ! | ATATCCCATAATACTTTGTT+GGG | - | chr7_2:79228110-79228129 | Msa1079970:exon | 25.0% |
| ! | TACCTTTGTTAAGGTAATTT+AGG | - | chr7_2:79228147-79228166 | Msa1079970:five_prime_UTR | 25.0% |
| ! | ATCCTAAATTACCTTAACAA+AGG | + | chr7_2:79228152-79228171 | None:intergenic | 25.0% |
| ATGTAAATGTAAAGCTGAGT+TGG | + | chr7_2:79225242-79225261 | None:intergenic | 30.0% | |
| TTGTCGTTGAAATAATTTGG+TGG | + | chr7_2:79225269-79225288 | None:intergenic | 30.0% | |
| !! | AGAAGATGTTGATAGTTAGA+AGG | + | chr7_2:79225559-79225578 | None:intergenic | 30.0% |
| CTAACTATCAACATCTTCTA+AGG | - | chr7_2:79225560-79225579 | Msa1079970:CDS | 30.0% | |
| AACAGCGAAAATATCTTTCT+TGG | + | chr7_2:79225620-79225639 | None:intergenic | 30.0% | |
| ACCTTATTACCATCATCAAA+CGG | + | chr7_2:79225658-79225677 | None:intergenic | 30.0% | |
| !! | TTTGATGATGGTAATAAGGT+AGG | - | chr7_2:79225658-79225677 | Msa1079970:CDS | 30.0% |
| !! | TTGATGATGGTAATAAGGTA+GGG | - | chr7_2:79225659-79225678 | Msa1079970:CDS | 30.0% |
| TAGGATTTGCATGTCAATTT+CGG | - | chr7_2:79225789-79225808 | Msa1079970:CDS | 30.0% | |
| ! | CTATTACTGGAATTGATGAT+CGG | - | chr7_2:79225824-79225843 | Msa1079970:CDS | 30.0% |
| !! | GTAATTTTTGAGAGCATGTT+TGG | - | chr7_2:79226010-79226029 | Msa1079970:intron | 30.0% |
| !! | GCTTGTAATTTTGAGAAAAG+GGG | - | chr7_2:79226391-79226410 | Msa1079970:intron | 30.0% |
| !! | ATTTTGAGAAAAGGGGAAAT+TGG | - | chr7_2:79226398-79226417 | Msa1079970:intron | 30.0% |
| GGGAAATTGGATTATTACTT+TGG | - | chr7_2:79226411-79226430 | Msa1079970:intron | 30.0% | |
| CAACTCTTCTTGAAATTGAA+TGG | + | chr7_2:79226596-79226615 | None:intergenic | 30.0% | |
| ! | TATTTCTCTGGTTCAAACAT+AGG | - | chr7_2:79226637-79226656 | Msa1079970:intron | 30.0% |
| CAACAAAACACATAGAATCA+GGG | + | chr7_2:79226714-79226733 | None:intergenic | 30.0% | |
| ACAACAAAACACATAGAATC+AGG | + | chr7_2:79226715-79226734 | None:intergenic | 30.0% | |
| ATTATAATTGAGCCTCCTAA+AGG | - | chr7_2:79227027-79227046 | Msa1079970:intron | 30.0% | |
| ! | AACATCTTGTTATCAATGCT+AGG | - | chr7_2:79227093-79227112 | Msa1079970:intron | 30.0% |
| ! | ACATCTTGTTATCAATGCTA+GGG | - | chr7_2:79227094-79227113 | Msa1079970:intron | 30.0% |
| ATTAACCTGTGTTACACTAT+AGG | + | chr7_2:79227281-79227300 | None:intergenic | 30.0% | |
| ATTAACCTGTGTTACACTAT+AGG | + | chr7_2:79227281-79227300 | None:intergenic | 30.0% | |
| AAAACATCAACATGTAGGTT+TGG | - | chr7_2:79227368-79227387 | Msa1079970:intron | 30.0% | |
| !! | ATAGTTTTACGAATGGGAAT+GGG | + | chr7_2:79227438-79227457 | None:intergenic | 30.0% |
| !! | AATAGTTTTACGAATGGGAA+TGG | + | chr7_2:79227439-79227458 | None:intergenic | 30.0% |
| !! | GATTGGAATAGTTTTACGAA+TGG | + | chr7_2:79227445-79227464 | None:intergenic | 30.0% |
| ATAGCTTATAAGCAGTAGAT+TGG | + | chr7_2:79227462-79227481 | None:intergenic | 30.0% | |
| ! | CTTAATAGTGCTACTATTAC+TGG | + | chr7_2:79227497-79227516 | None:intergenic | 30.0% |
| TAGCATATTTGCAGCAAATA+TGG | - | chr7_2:79227610-79227629 | Msa1079970:CDS | 30.0% | |
| GTATAATTATCAGCAGGAAA+TGG | + | chr7_2:79227666-79227685 | None:intergenic | 30.0% | |
| !! | GAGAATCTAACTTTTGTTGT+AGG | + | chr7_2:79227933-79227952 | None:intergenic | 30.0% |
| ATTGACTGTACACATTCAAA+AGG | - | chr7_2:79227963-79227982 | Msa1079970:CDS | 30.0% | |
| GAAATGATCAGACATAGAAT+AGG | - | chr7_2:79228055-79228074 | Msa1079970:CDS | 30.0% | |
| ! | AGATCCCAACAAAGTATTAT+GGG | + | chr7_2:79228117-79228136 | None:intergenic | 30.0% |
| ! | AAGATCCCAACAAAGTATTA+TGG | + | chr7_2:79228118-79228137 | None:intergenic | 30.0% |
| ! | TAAGGTAATTTAGGATGTGA+TGG | - | chr7_2:79228156-79228175 | Msa1079970:five_prime_UTR | 30.0% |
| AATTTCATCTGACAAACCTA+TGG | + | chr7_2:79228257-79228276 | None:intergenic | 30.0% | |
| !! | AAAGCTGAGTTGGTATGATT+TGG | + | chr7_2:79225232-79225251 | None:intergenic | 35.0% |
| TCAACGTTCTTCTCTTACTA+TGG | - | chr7_2:79225309-79225328 | Msa1079970:three_prime_UTR | 35.0% | |
| AGGTAACTTAGATTCCCAAA+CGG | + | chr7_2:79225539-79225558 | None:intergenic | 35.0% | |
| AAACCTTTACCGTTTGATGA+TGG | - | chr7_2:79225646-79225665 | Msa1079970:CDS | 35.0% | |
| TTACCATCATCAAACGGTAA+AGG | + | chr7_2:79225652-79225671 | None:intergenic | 35.0% | |
| !! | ACCGTTTGATGATGGTAATA+AGG | - | chr7_2:79225654-79225673 | Msa1079970:CDS | 35.0% |
| ! | TTAGGTTTTTGCAGCAATTG+TGG | - | chr7_2:79225749-79225768 | Msa1079970:CDS | 35.0% |
| TGTAACCTAGATTCTTCAGT+AGG | + | chr7_2:79225868-79225887 | None:intergenic | 35.0% | |
| TTTGGATCTTAGGATGCATT+AGG | + | chr7_2:79226261-79226280 | None:intergenic | 35.0% | |
| GGAATTGTTGAGACTATAAC+AGG | + | chr7_2:79226336-79226355 | None:intergenic | 35.0% | |
| TAGTCTCAACAATTCCTGAT+TGG | - | chr7_2:79226340-79226359 | Msa1079970:intron | 35.0% | |
| TTTAATCCAAGAGGATTGCT+AGG | - | chr7_2:79226445-79226464 | Msa1079970:intron | 35.0% | |
| CAATGGGAATGTTAAATTGC+TGG | - | chr7_2:79226777-79226796 | Msa1079970:intron | 35.0% | |
| GGCAGTGTAGTTTCTAATAT+TGG | + | chr7_2:79226962-79226981 | None:intergenic | 35.0% | |
| AAACTGCATCTATAGTGAGA+AGG | + | chr7_2:79226983-79227002 | None:intergenic | 35.0% | |
| CAGGTTAATCTCACAGAAAA+AGG | - | chr7_2:79227327-79227346 | Msa1079970:intron | 35.0% | |
| CATATTTGCAGCAAATATGG+TGG | - | chr7_2:79227613-79227632 | Msa1079970:CDS | 35.0% | |
| ! | GAGAGAGTATAATTATCAGC+AGG | + | chr7_2:79227672-79227691 | None:intergenic | 35.0% |
| GTTGACAGCTTAAATATGAC+TGG | + | chr7_2:79227780-79227799 | None:intergenic | 35.0% | |
| TTTAAGCTGTCAACTTCAGA+TGG | - | chr7_2:79227786-79227805 | Msa1079970:intron | 35.0% | |
| CAATCATAAGCGTGGATATT+GGG | - | chr7_2:79227866-79227885 | Msa1079970:CDS | 35.0% | |
| TGGATATTGGGTAGATTACA+AGG | - | chr7_2:79227878-79227897 | Msa1079970:CDS | 35.0% | |
| TATTGGGTAGATTACAAGGT+AGG | - | chr7_2:79227882-79227901 | Msa1079970:CDS | 35.0% | |
| TGTACAGTCAATCTGTTTCA+TGG | + | chr7_2:79227955-79227974 | None:intergenic | 35.0% | |
| TTACACAGCTACCTTTGTTA+AGG | - | chr7_2:79228138-79228157 | Msa1079970:five_prime_UTR | 35.0% | |
| GTTATTGGCGTCAACATCAA+AGG | + | chr7_2:79225193-79225212 | None:intergenic | 40.0% | |
| !! | TGAGTTGGTATGATTTGGTG+TGG | + | chr7_2:79225227-79225246 | None:intergenic | 40.0% |
| TTGTCGAATCTTGGATCCAA+CGG | - | chr7_2:79225379-79225398 | Msa1079970:three_prime_UTR | 40.0% | |
| CGAGCTAAGTTACAAATCTC+GGG | + | chr7_2:79225478-79225497 | None:intergenic | 40.0% | |
| GCGAGCTAAGTTACAAATCT+CGG | + | chr7_2:79225479-79225498 | None:intergenic | 40.0% | |
| GCGAAAGGTTTGTCTATTAC+TGG | - | chr7_2:79225811-79225830 | Msa1079970:CDS | 40.0% | |
| ! | GAATTGATGATCGGAGATAC+TGG | - | chr7_2:79225833-79225852 | Msa1079970:CDS | 40.0% |
| !! | CAATTCCTGATTGGTTTGCT+TGG | - | chr7_2:79226349-79226368 | Msa1079970:intron | 40.0% |
| ACAAACCAAGCAAACCAATC+AGG | + | chr7_2:79226357-79226376 | None:intergenic | 40.0% | |
| !! | GCGACTTGCTAATATTTCTC+TGG | - | chr7_2:79226625-79226644 | Msa1079970:intron | 40.0% |
| TGCAACATTTCACTGATGAC+CGG | - | chr7_2:79227002-79227021 | Msa1079970:intron | 40.0% | |
| GGAGGCTCAATTATAATTGC+CGG | + | chr7_2:79227024-79227043 | None:intergenic | 40.0% | |
| !!! | TTTGCGACTTTTGGTGTCAT+AGG | - | chr7_2:79227058-79227077 | Msa1079970:intron | 40.0% |
| CGAAGTTTAGCAGAACTTGT+TGG | - | chr7_2:79227189-79227208 | Msa1079970:intron | 40.0% | |
| CTGCTCTGCGTAGTTTATTA+TGG | - | chr7_2:79227391-79227410 | Msa1079970:intron | 40.0% | |
| TGGGAATGGGAATGGAAATT+TGG | + | chr7_2:79227425-79227444 | None:intergenic | 40.0% | |
| TTTACGAATGGGAATGGGAA+TGG | + | chr7_2:79227433-79227452 | None:intergenic | 40.0% | |
| GCAAATATGGTGGTTTGAAG+TGG | - | chr7_2:79227623-79227642 | Msa1079970:CDS | 40.0% | |
| ! | ATATGGTGGTTTGAAGTGGA+TGG | - | chr7_2:79227627-79227646 | Msa1079970:CDS | 40.0% |
| ! | TATGGTGGTTTGAAGTGGAT+GGG | - | chr7_2:79227628-79227647 | Msa1079970:CDS | 40.0% |
| !! | GTCTTTTGGAAAATCGTCCA+AGG | + | chr7_2:79227707-79227726 | None:intergenic | 40.0% |
| ! | GGACGATTTTCCAAAAGACT+CGG | - | chr7_2:79227708-79227727 | Msa1079970:intron | 40.0% |
| !! | GATTTTCCAAAAGACTCGGT+CGG | - | chr7_2:79227712-79227731 | Msa1079970:intron | 40.0% |
| ACTGTCCACGATGATACATA+CGG | - | chr7_2:79227843-79227862 | Msa1079970:CDS | 40.0% | |
| GCAATCATAAGCGTGGATAT+TGG | - | chr7_2:79227865-79227884 | Msa1079970:CDS | 40.0% | |
| GTAGGTGAGTTTATTGTGAC+TGG | - | chr7_2:79227900-79227919 | Msa1079970:CDS | 40.0% | |
| GACTGTACACATTCAAAAGG+TGG | - | chr7_2:79227966-79227985 | Msa1079970:CDS | 40.0% | |
| TGGGATATTTGACATCACCA+AGG | + | chr7_2:79228098-79228117 | None:intergenic | 40.0% | |
| GTGGTGTGGGAACATGTTAT+TGG | + | chr7_2:79225208-79225227 | None:intergenic | 45.0% | |
| !! | GGTATGATTTGGTGTGGTGT+GGG | + | chr7_2:79225221-79225240 | None:intergenic | 45.0% |
| !! | TGGTATGATTTGGTGTGGTG+TGG | + | chr7_2:79225222-79225241 | None:intergenic | 45.0% |
| ! | CACGAGCAACACAGTTTTCA+GGG | + | chr7_2:79225435-79225454 | None:intergenic | 45.0% |
| ! | ACACGAGCAACACAGTTTTC+AGG | + | chr7_2:79225436-79225455 | None:intergenic | 45.0% |
| GCTAAGTTACAAATCTCGGG+AGG | + | chr7_2:79225475-79225494 | None:intergenic | 45.0% | |
| AGATTCCCAAACGGAATCAG+CGG | + | chr7_2:79225530-79225549 | None:intergenic | 45.0% | |
| ATTCCGACAGCGTAGTTCTT+CGG | + | chr7_2:79225593-79225612 | None:intergenic | 45.0% | |
| TGCAGCAATTGTGGCTTGAT+AGG | - | chr7_2:79225758-79225777 | Msa1079970:CDS | 45.0% | |
| GCAGCAATTGTGGCTTGATA+GGG | - | chr7_2:79225759-79225778 | Msa1079970:CDS | 45.0% | |
| TTGTGGCTTGATAGGGTTAC+TGG | - | chr7_2:79225766-79225785 | Msa1079970:CDS | 45.0% | |
| TGCATGTCAATTTCGGCGAA+AGG | - | chr7_2:79225796-79225815 | Msa1079970:CDS | 45.0% | |
| ATGATCGGAGATACTGGACT+TGG | - | chr7_2:79225839-79225858 | Msa1079970:CDS | 45.0% | |
| TGATCGGAGATACTGGACTT+GGG | - | chr7_2:79225840-79225859 | Msa1079970:CDS | 45.0% | |
| GGGTTCCTACTGAAGAATCT+AGG | - | chr7_2:79225860-79225879 | Msa1079970:CDS | 45.0% | |
| ! | TTGAGAGCATGTTTGGGCTT+TGG | - | chr7_2:79226017-79226036 | Msa1079970:intron | 45.0% |
| TGTGTTCCTAGCAATCCTCT+TGG | + | chr7_2:79226454-79226473 | None:intergenic | 45.0% | |
| !! | CAAAGAGAAGCACCTTTAGG+AGG | + | chr7_2:79227042-79227061 | None:intergenic | 45.0% |
| !! | TCGCAAAGAGAAGCACCTTT+AGG | + | chr7_2:79227045-79227064 | None:intergenic | 45.0% |
| ! | GTGCTTCTCTTTGCGACTTT+TGG | - | chr7_2:79227049-79227068 | Msa1079970:intron | 45.0% |
| TCGAGAACTCGTGAAGACTT+CGG | + | chr7_2:79227172-79227191 | None:intergenic | 45.0% | |
| TGCAGCCTATAGTGTAACAC+AGG | - | chr7_2:79227273-79227292 | Msa1079970:intron | 45.0% | |
| TGCAGCCTATAGTGTAACAC+AGG | - | chr7_2:79227273-79227292 | Msa1079970:intron | 45.0% | |
| ! | ATGGTGGTTTGAAGTGGATG+GGG | - | chr7_2:79227629-79227648 | Msa1079970:CDS | 45.0% |
| CTATGACCAAACCCATGGTT+GGG | - | chr7_2:79227746-79227765 | Msa1079970:intron | 45.0% | |
| TTTGATCCCAACCATGGGTT+TGG | + | chr7_2:79227755-79227774 | None:intergenic | 45.0% | |
| ! | TGGCTTTTGATCCCAACCAT+GGG | + | chr7_2:79227760-79227779 | None:intergenic | 45.0% |
| GATTGCCGTATGTATCATCG+TGG | + | chr7_2:79227851-79227870 | None:intergenic | 45.0% | |
| ACATACGGCAATCATAAGCG+TGG | - | chr7_2:79227858-79227877 | Msa1079970:CDS | 45.0% | |
| TCATTTCCCTGCTGTTCCAT+AGG | - | chr7_2:79228238-79228257 | Msa1079970:five_prime_UTR | 45.0% | |
| GACAAACCTATGGAACAGCA+GGG | + | chr7_2:79228247-79228266 | None:intergenic | 45.0% | |
| TGACAAACCTATGGAACAGC+AGG | + | chr7_2:79228248-79228267 | None:intergenic | 45.0% | |
| GGTGCTTCGTTGTCGAATCT+TGG | - | chr7_2:79225370-79225389 | Msa1079970:three_prime_UTR | 50.0% | |
| TCAACCATCGCTCCAAGTCT+CGG | - | chr7_2:79225403-79225422 | Msa1079970:three_prime_UTR | 50.0% | |
| ! | CGCTTAAATCGCGCTTTTCG+CGG | - | chr7_2:79225496-79225515 | Msa1079970:CDS | 50.0% |
| !! | TGCTTCCGCTGATTCCGTTT+GGG | - | chr7_2:79225522-79225541 | Msa1079970:CDS | 50.0% |
| TTCCGACAGCGTAGTTCTTC+GGG | + | chr7_2:79225592-79225611 | None:intergenic | 50.0% | |
| GGCTTGATAGGGTTACTGGT+AGG | - | chr7_2:79225770-79225789 | Msa1079970:CDS | 50.0% | |
| CGAGAACTCGTGAAGACTTC+GGG | + | chr7_2:79227171-79227190 | None:intergenic | 50.0% | |
| CTCTCCTTTAGGCTTCACCT+TGG | - | chr7_2:79227687-79227706 | Msa1079970:CDS | 50.0% | |
| TCGTCCAAGGTGAAGCCTAA+AGG | + | chr7_2:79227694-79227713 | None:intergenic | 50.0% | |
| TGCAGCTATGACCAAACCCA+TGG | - | chr7_2:79227741-79227760 | Msa1079970:intron | 50.0% | |
| GCTATGACCAAACCCATGGT+TGG | - | chr7_2:79227745-79227764 | Msa1079970:intron | 50.0% | |
| !! | CTGGCTTTTGATCCCAACCA+TGG | + | chr7_2:79227761-79227780 | None:intergenic | 50.0% |
| GCTGTCAACTTCAGATGGTC+AGG | - | chr7_2:79227791-79227810 | Msa1079970:intron | 50.0% | |
| ! | AGCATCATCTGAGTGCTGCT+TGG | - | chr7_2:79227815-79227834 | Msa1079970:CDS | 50.0% |
| TCAAAAAACCGCCTCCCTTG+CGG | + | chr7_2:79228037-79228056 | None:intergenic | 50.0% | |
| TGGAGCGATGGTTGAACCGT+TGG | + | chr7_2:79225398-79225417 | None:intergenic | 55.0% | |
| !! | CTGCTTCCGCTGATTCCGTT+TGG | - | chr7_2:79225521-79225540 | Msa1079970:CDS | 55.0% |
| TGCCCGAAGAACTACGCTGT+CGG | - | chr7_2:79225587-79225606 | Msa1079970:CDS | 55.0% | |
| ! | GTGGTTTGAAGTGGATGGGG+AGG | - | chr7_2:79227632-79227651 | Msa1079970:CDS | 55.0% |
| TTGCGGTCTCTCAACTCGCT+AGG | + | chr7_2:79228020-79228039 | None:intergenic | 55.0% | |
| ! | TAGCGAGTTGAGAGACCGCA+AGG | - | chr7_2:79228019-79228038 | Msa1079970:CDS | 55.0% |
| ! | AGCGAGTTGAGAGACCGCAA+GGG | - | chr7_2:79228020-79228039 | Msa1079970:CDS | 55.0% |
| ACTCGCTCGCGTGCGTGTTA+TGG | - | chr7_2:79225348-79225367 | Msa1079970:three_prime_UTR | 60.0% | |
| CTCGCTCGCGTGCGTGTTAT+GGG | - | chr7_2:79225349-79225368 | Msa1079970:three_prime_UTR | 60.0% | |
| TCAGGGATGTCGCCGAGACT+TGG | + | chr7_2:79225418-79225437 | None:intergenic | 60.0% | |
| !! | TACGCGCCGACCGAGTCTTT+TGG | + | chr7_2:79227721-79227740 | None:intergenic | 60.0% |
| GAGTTGAGAGACCGCAAGGG+AGG | - | chr7_2:79228023-79228042 | Msa1079970:CDS | 60.0% | |
| TTGAGAGACCGCAAGGGAGG+CGG | - | chr7_2:79228026-79228045 | Msa1079970:CDS | 60.0% | |
| GTCGCCGAGACTTGGAGCGA+TGG | + | chr7_2:79225410-79225429 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 79225177 | 79228309 | 79225177 | ID=Msa1079970;Name=Msa1079970 |
| chr7_2 | mRNA | 79225177 | 79228309 | 79225177 | ID=Msa1079970-mRNA-1;Parent=Msa1079970;Name=Msa1079970-mRNA-1;_AED=0.11;_eAED=0.11;_QI=190|1|1|1|1|1|3|248|296 |
| chr7_2 | exon | 79225177 | 79225887 | 79225177 | ID=Msa1079970-mRNA-1:exon:19919;Parent=Msa1079970-mRNA-1 |
| chr7_2 | exon | 79227605 | 79227723 | 79227605 | ID=Msa1079970-mRNA-1:exon:19918;Parent=Msa1079970-mRNA-1 |
| chr7_2 | exon | 79227811 | 79228309 | 79227811 | ID=Msa1079970-mRNA-1:exon:19917;Parent=Msa1079970-mRNA-1 |
| chr7_2 | five_prime_UTR | 79228120 | 79228309 | 79228120 | ID=Msa1079970-mRNA-1:five_prime_utr;Parent=Msa1079970-mRNA-1 |
| chr7_2 | CDS | 79227811 | 79228119 | 79227811 | ID=Msa1079970-mRNA-1:cds;Parent=Msa1079970-mRNA-1 |
| chr7_2 | CDS | 79227605 | 79227723 | 79227605 | ID=Msa1079970-mRNA-1:cds;Parent=Msa1079970-mRNA-1 |
| chr7_2 | CDS | 79225425 | 79225887 | 79225425 | ID=Msa1079970-mRNA-1:cds;Parent=Msa1079970-mRNA-1 |
| chr7_2 | three_prime_UTR | 79225177 | 79225424 | 79225177 | ID=Msa1079970-mRNA-1:three_prime_utr;Parent=Msa1079970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
