Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042130 | RHN48604.1 | 97.973 | 296 | 6 | 0 | 1 | 296 | 73 | 368 | 0.0 | 609 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042130 | sp|Q9LF92|P2A15_ARATH | 69.565 | 299 | 87 | 3 | 1 | 296 | 1 | 298 | 1.54e-154 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042130 | A0A396H9X4 | 97.973 | 296 | 6 | 0 | 1 | 296 | 73 | 368 | 0.0 | 609 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa1042130 | -0.817528 | 3.147307e-52 | -8.615850e-47 |
| Msa0021980 | Msa1042130 | -0.800041 | 1.735777e-48 | -8.615850e-47 |
| Msa0027030 | Msa1042130 | -0.803105 | 4.084912e-49 | -8.615850e-47 |
| Msa0034100 | Msa1042130 | -0.816602 | 5.082441e-52 | -8.615850e-47 |
| Msa0036990 | Msa1042130 | -0.812799 | 3.535465e-51 | -8.615850e-47 |
| Msa0039610 | Msa1042130 | 0.811876 | 5.621647e-51 | -8.615850e-47 |
| Msa0040090 | Msa1042130 | -0.804125 | 2.510415e-49 | -8.615850e-47 |
| Msa0053960 | Msa1042130 | -0.804571 | 2.026182e-49 | -8.615850e-47 |
| Msa0080810 | Msa1042130 | -0.800946 | 1.135000e-48 | -8.615850e-47 |
| Msa0087130 | Msa1042130 | -0.816384 | 5.686706e-52 | -8.615850e-47 |
| Msa0087250 | Msa1042130 | 0.831968 | 1.235281e-55 | -8.615850e-47 |
| Msa0091470 | Msa1042130 | -0.802324 | 5.920504e-49 | -8.615850e-47 |
| Msa0096510 | Msa1042130 | -0.815950 | 7.109311e-52 | -8.615850e-47 |
| Msa0117300 | Msa1042130 | -0.813636 | 2.315901e-51 | -8.615850e-47 |
| Msa0120320 | Msa1042130 | -0.822191 | 2.702941e-53 | -8.615850e-47 |
| Msa0608940 | Msa1042130 | -0.814600 | 1.418303e-51 | -8.615850e-47 |
| Msa0610780 | Msa1042130 | -0.803609 | 3.213131e-49 | -8.615850e-47 |
| Msa0610810 | Msa1042130 | -0.810259 | 1.260040e-50 | -8.615850e-47 |
| Msa0649250 | Msa1042130 | -0.803256 | 3.801275e-49 | -8.615850e-47 |
| Msa0649530 | Msa1042130 | -0.822700 | 2.058846e-53 | -8.615850e-47 |
| Msa0651310 | Msa1042130 | -0.816825 | 4.527967e-52 | -8.615850e-47 |
| Msa0654880 | Msa1042130 | -0.814481 | 1.507455e-51 | -8.615850e-47 |
| Msa0691740 | Msa1042130 | -0.821220 | 4.533061e-53 | -8.615850e-47 |
| Msa0693400 | Msa1042130 | -0.801756 | 7.746952e-49 | -8.615850e-47 |
| Msa0698650 | Msa1042130 | -0.804370 | 2.232013e-49 | -8.615850e-47 |
| Msa0705810 | Msa1042130 | -0.822696 | 2.063225e-53 | -8.615850e-47 |
| Msa0712670 | Msa1042130 | -0.834753 | 2.497809e-56 | -8.615850e-47 |
| Msa0714060 | Msa1042130 | -0.812073 | 5.093946e-51 | -8.615850e-47 |
| Msa0714200 | Msa1042130 | -0.813869 | 2.057456e-51 | -8.615850e-47 |
| Msa0718500 | Msa1042130 | 0.803527 | 3.340620e-49 | -8.615850e-47 |
| Msa0748980 | Msa1042130 | -0.874969 | 4.457039e-68 | -8.615850e-47 |
| Msa0752830 | Msa1042130 | -0.815268 | 1.008641e-51 | -8.615850e-47 |
| Msa0756440 | Msa1042130 | -0.824231 | 9.026503e-54 | -8.615850e-47 |
| Msa0795400 | Msa1042130 | -0.827972 | 1.164189e-54 | -8.615850e-47 |
| Msa0813630 | Msa1042130 | -0.806330 | 8.670386e-50 | -8.615850e-47 |
| Msa0825520 | Msa1042130 | -0.885403 | 8.377980e-72 | -8.615850e-47 |
| Msa0835550 | Msa1042130 | -0.825980 | 3.487306e-54 | -8.615850e-47 |
| Msa0128110 | Msa1042130 | -0.818894 | 1.544681e-52 | -8.615850e-47 |
| Msa0131090 | Msa1042130 | -0.845610 | 3.647012e-59 | -8.615850e-47 |
| Msa0134400 | Msa1042130 | -0.830339 | 3.104254e-55 | -8.615850e-47 |
| Msa0135330 | Msa1042130 | 0.828272 | 9.859641e-55 | -8.615850e-47 |
| Msa0148430 | Msa1042130 | -0.801940 | 7.103478e-49 | -8.615850e-47 |
| Msa0160650 | Msa1042130 | -0.826188 | 3.111729e-54 | -8.615850e-47 |
| Msa0163530 | Msa1042130 | -0.810792 | 9.666912e-51 | -8.615850e-47 |
| Msa0163960 | Msa1042130 | -0.817392 | 3.376601e-52 | -8.615850e-47 |
| Msa0167150 | Msa1042130 | -0.808803 | 2.587598e-50 | -8.615850e-47 |
| Msa0184750 | Msa1042130 | 0.819445 | 1.157051e-52 | -8.615850e-47 |
| Msa0225880 | Msa1042130 | -0.803073 | 4.149318e-49 | -8.615850e-47 |
| Msa0367590 | Msa1042130 | -0.811949 | 5.420534e-51 | -8.615850e-47 |
| Msa0372990 | Msa1042130 | -0.815973 | 7.023897e-52 | -8.615850e-47 |
| Msa0378670 | Msa1042130 | -0.813272 | 2.784282e-51 | -8.615850e-47 |
| Msa0378700 | Msa1042130 | -0.817299 | 3.543223e-52 | -8.615850e-47 |
| Msa0383550 | Msa1042130 | 0.833398 | 5.457601e-56 | -8.615850e-47 |
| Msa0404060 | Msa1042130 | -0.800574 | 1.352227e-48 | -8.615850e-47 |
| Msa0415200 | Msa1042130 | -0.867272 | 1.546769e-65 | -8.615850e-47 |
| Msa0428330 | Msa1042130 | -0.831276 | 1.830112e-55 | -8.615850e-47 |
| Msa0431940 | Msa1042130 | -0.829009 | 6.543143e-55 | -8.615850e-47 |
| Msa0460220 | Msa1042130 | -0.823024 | 1.730816e-53 | -8.615850e-47 |
| Msa0469840 | Msa1042130 | -0.804735 | 1.872856e-49 | -8.615850e-47 |
| Msa0998940 | Msa1042130 | -0.802984 | 4.327325e-49 | -8.615850e-47 |
| Msa0999480 | Msa1042130 | -0.809425 | 1.904330e-50 | -8.615850e-47 |
| Msa0999590 | Msa1042130 | -0.803120 | 4.055812e-49 | -8.615850e-47 |
| Msa1031530 | Msa1042130 | -0.828035 | 1.124313e-54 | -8.615850e-47 |
| Msa1036020 | Msa1042130 | 0.807236 | 5.577469e-50 | -8.615850e-47 |
| Msa1042130 | Msa1070630 | -0.808866 | 2.509302e-50 | -8.615850e-47 |
| Msa1042130 | Msa1071640 | -0.829524 | 4.906589e-55 | -8.615850e-47 |
| Msa1042130 | Msa1076280 | 0.810293 | 1.238588e-50 | -8.615850e-47 |
| Msa1042130 | Msa1078600 | -0.811750 | 5.987960e-51 | -8.615850e-47 |
| Msa1042130 | Msa1078770 | -0.809431 | 1.899131e-50 | -8.615850e-47 |
| Msa1042130 | Msa1079970 | 0.833034 | 6.724385e-56 | -8.615850e-47 |
| Msa1042130 | Msa1083130 | 0.807405 | 5.136463e-50 | -8.615850e-47 |
| Msa1042130 | Msa1088740 | -0.816134 | 6.465766e-52 | -8.615850e-47 |
| Msa1042130 | Msa1096520 | -0.801461 | 8.905960e-49 | -8.615850e-47 |
| Msa1042130 | Msa1096570 | -0.811236 | 7.743568e-51 | -8.615850e-47 |
| Msa1042130 | Msa1101300 | -0.803888 | 2.812107e-49 | -8.615850e-47 |
| Msa1042130 | Msa1117510 | -0.815909 | 7.260318e-52 | -8.615850e-47 |
| Msa1042130 | Msa1124880 | 0.990791 | 2.426797e-184 | -8.615850e-47 |
| Msa1042130 | Msa1127910 | 0.803772 | 2.972553e-49 | -8.615850e-47 |
| Msa1042130 | Msa1143860 | -0.813277 | 2.777113e-51 | -8.615850e-47 |
| Msa1042130 | Msa1158450 | -0.821294 | 4.358206e-53 | -8.615850e-47 |
| Msa1042130 | Msa1161210 | -0.832211 | 1.075664e-55 | -8.615850e-47 |
| Msa1042130 | Msa1167500 | 0.976089 | 3.654031e-141 | -8.615850e-47 |
| Msa1042130 | Msa1200270 | 0.807630 | 4.602459e-50 | -8.615850e-47 |
| Msa1042130 | Msa1203840 | -0.804424 | 2.174758e-49 | -8.615850e-47 |
| Msa1042130 | Msa1203860 | -0.804782 | 1.831403e-49 | -8.615850e-47 |
| Msa1042130 | Msa1209160 | -0.812871 | 3.408054e-51 | -8.615850e-47 |
| Msa1042130 | Msa1219060 | -0.838286 | 3.147765e-57 | -8.615850e-47 |
| Msa1042130 | Msa1221540 | -0.803067 | 4.161278e-49 | -8.615850e-47 |
| Msa1042130 | Msa1224310 | -0.807377 | 5.207506e-50 | -8.615850e-47 |
| Msa1042130 | Msa1225140 | -0.813261 | 2.799575e-51 | -8.615850e-47 |
| Msa1042130 | Msa1236860 | -0.819349 | 1.217165e-52 | -8.615850e-47 |
| Msa1042130 | Msa1243630 | -0.800317 | 1.525427e-48 | -8.615850e-47 |
| Msa1042130 | Msa1244220 | -0.800817 | 1.206312e-48 | -8.615850e-47 |
| Msa1042130 | Msa1255020 | -0.812225 | 4.718438e-51 | -8.615850e-47 |
| Msa1042130 | Msa1290780 | 0.828031 | 1.126725e-54 | -8.615850e-47 |
| Msa1042130 | Msa1295220 | -0.805241 | 1.468257e-49 | -8.615850e-47 |
| Msa1042130 | Msa1295470 | -0.807758 | 4.323046e-50 | -8.615850e-47 |
| Msa1042130 | Msa1297220 | -0.820889 | 5.403554e-53 | -8.615850e-47 |
| Msa1042130 | Msa1317240 | -0.830420 | 2.966615e-55 | -8.615850e-47 |
| Msa1042130 | Msa1323260 | -0.809866 | 1.530967e-50 | -8.615850e-47 |
| Msa1042130 | Msa1330910 | -0.812714 | 3.689987e-51 | -8.615850e-47 |
| Msa1042130 | Msa1332690 | -0.827904 | 1.209008e-54 | -8.615850e-47 |
| Msa1042130 | Msa1334020 | -0.803881 | 2.821124e-49 | -8.615850e-47 |
| Msa1042130 | Msa1338180 | -0.817036 | 4.060535e-52 | -8.615850e-47 |
| Msa1042130 | Msa1342280 | 0.819143 | 1.355850e-52 | -8.615850e-47 |
| Msa1042130 | Msa1343450 | -0.819663 | 1.031696e-52 | -8.615850e-47 |
| Msa1042130 | Msa1346220 | -0.802001 | 6.901580e-49 | -8.615850e-47 |
| Msa1042130 | Msa1349640 | -0.808759 | 2.644652e-50 | -8.615850e-47 |
| Msa1042130 | Msa1356730 | -0.844459 | 7.461562e-59 | -8.615850e-47 |
| Msa1042130 | Msa1364850 | -0.802093 | 6.605379e-49 | -8.615850e-47 |
| Msa1042130 | Msa1368660 | -0.827359 | 1.634475e-54 | -8.615850e-47 |
| Msa1042130 | Msa1369180 | -0.814167 | 1.768794e-51 | -8.615850e-47 |
| Msa1042130 | Msa1376010 | -0.812456 | 4.201298e-51 | -8.615850e-47 |
| Msa1042130 | Msa1382750 | -0.811141 | 8.122287e-51 | -8.615850e-47 |
| Msa1042130 | Msa1384620 | -0.884452 | 1.894166e-71 | -8.615850e-47 |
| Msa1042130 | Msa1388270 | -0.813429 | 2.571146e-51 | -8.615850e-47 |
| Msa1042130 | Msa1418840 | -0.805529 | 1.277471e-49 | -8.615850e-47 |
| Msa1042130 | Msa1427260 | -0.811603 | 6.446570e-51 | -8.615850e-47 |
| Msa1042130 | Msa1431240 | -0.815372 | 9.563905e-52 | -8.615850e-47 |
| Msa1042130 | Msa1435690 | -0.804919 | 1.714180e-49 | -8.615850e-47 |
| Msa1042130 | Msa1436660 | -0.812937 | 3.297500e-51 | -8.615850e-47 |
| Msa1042130 | Msa1446220 | -0.801544 | 8.566306e-49 | -8.615850e-47 |
| Msa1042130 | Msa1451780 | -0.818845 | 1.584821e-52 | -8.615850e-47 |
| Msa1042130 | Msa1456620 | -0.813668 | 2.277677e-51 | -8.615850e-47 |
| Msa1042130 | Msa1459630 | -0.815728 | 7.965643e-52 | -8.615850e-47 |
| Msa1042130 | Msa1460530 | -0.811830 | 5.754527e-51 | -8.615850e-47 |
| Msa1042130 | Msa1462600 | -0.801732 | 7.835859e-49 | -8.615850e-47 |
| Msa1042130 | Msa1465380 | -0.804996 | 1.651597e-49 | -8.615850e-47 |
| Msa0297950 | Msa1042130 | 0.802445 | 5.590530e-49 | -8.615850e-47 |
| Msa0304110 | Msa1042130 | -0.807075 | 6.033584e-50 | -8.615850e-47 |
| Msa0314980 | Msa1042130 | -0.814258 | 1.688419e-51 | -8.615850e-47 |
| Msa0341190 | Msa1042130 | -0.806453 | 8.166318e-50 | -8.615850e-47 |
| Msa0515420 | Msa1042130 | -0.806598 | 7.612362e-50 | -8.615850e-47 |
| Msa0518480 | Msa1042130 | -0.813032 | 3.142116e-51 | -8.615850e-47 |
| Msa0520810 | Msa1042130 | -0.807736 | 4.368678e-50 | -8.615850e-47 |
| Msa0521820 | Msa1042130 | 0.822082 | 2.865786e-53 | -8.615850e-47 |
| Msa0555510 | Msa1042130 | -0.824171 | 9.326550e-54 | -8.615850e-47 |
| Msa0579170 | Msa1042130 | -0.818124 | 2.308313e-52 | -8.615850e-47 |
| Msa0579230 | Msa1042130 | -0.818365 | 2.036330e-52 | -8.615850e-47 |
| Msa0864730 | Msa1042130 | -0.887000 | 2.094221e-72 | -8.615850e-47 |
| Msa0864750 | Msa1042130 | -0.887116 | 1.892270e-72 | -8.615850e-47 |
| Msa0887100 | Msa1042130 | -0.819749 | 9.863453e-53 | -8.615850e-47 |
| Msa0899080 | Msa1042130 | -0.804038 | 2.617001e-49 | -8.615850e-47 |
| Msa0899730 | Msa1042130 | -0.801569 | 8.465048e-49 | -8.615850e-47 |
| Msa0909720 | Msa1042130 | -0.808637 | 2.808306e-50 | -8.615850e-47 |
| Msa0912110 | Msa1042130 | -0.804144 | 2.486757e-49 | -8.615850e-47 |
| Msa0927890 | Msa1042130 | -0.804523 | 2.074187e-49 | -8.615850e-47 |
| Msa0930210 | Msa1042130 | 0.814423 | 1.552591e-51 | -8.615850e-47 |
| Msa0938370 | Msa1042130 | -0.815630 | 8.379729e-52 | -8.615850e-47 |
| Msa0950470 | Msa1042130 | -0.811534 | 6.671392e-51 | -8.615850e-47 |
| Msa0950570 | Msa1042130 | -0.815570 | 8.638778e-52 | -8.615850e-47 |
| Msa0967260 | Msa1042130 | -0.803719 | 3.047761e-49 | -8.615850e-47 |
| Msa0968960 | Msa1042130 | -0.861574 | 9.326802e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042130 | MtrunA17_Chr7g0265551 | 97.973 | 296 | 6 | 0 | 1 | 296 | 73 | 368 | 0.0 | 609 |
| Msa1042130 | MtrunA17_Chr5g0397981 | 54.983 | 291 | 116 | 4 | 1 | 290 | 19 | 295 | 2.06e-112 | 327 |
| Msa1042130 | MtrunA17_Chr4g0057281 | 57.509 | 273 | 104 | 2 | 19 | 290 | 19 | 280 | 9.36e-110 | 319 |
| Msa1042130 | MtrunA17_Chr1g0203751 | 53.020 | 298 | 120 | 2 | 1 | 289 | 1 | 287 | 2.25e-109 | 318 |
| Msa1042130 | MtrunA17_Chr8g0350401 | 54.110 | 292 | 115 | 3 | 1 | 284 | 1 | 281 | 3.93e-108 | 315 |
| Msa1042130 | MtrunA17_Chr6g0472801 | 47.603 | 292 | 139 | 2 | 1 | 289 | 1 | 281 | 2.26e-98 | 290 |
| Msa1042130 | MtrunA17_Chr7g0272101 | 31.250 | 272 | 158 | 8 | 22 | 283 | 4 | 256 | 1.45e-33 | 123 |
| Msa1042130 | MtrunA17_Chr4g0010881 | 30.712 | 267 | 154 | 7 | 22 | 287 | 4 | 240 | 2.64e-32 | 119 |
| Msa1042130 | MtrunA17_Chr1g0189721 | 26.354 | 277 | 176 | 6 | 19 | 283 | 4 | 264 | 2.03e-30 | 115 |
| Msa1042130 | MtrunA17_Chr1g0203281 | 26.241 | 282 | 173 | 6 | 21 | 283 | 6 | 271 | 5.88e-29 | 111 |
| Msa1042130 | MtrunA17_Chr1g0189671 | 26.481 | 287 | 176 | 6 | 18 | 285 | 3 | 273 | 1.24e-28 | 110 |
| Msa1042130 | MtrunA17_Chr1g0192371 | 25.862 | 290 | 175 | 8 | 18 | 283 | 7 | 280 | 2.83e-27 | 107 |
| Msa1042130 | MtrunA17_Chr1g0189611 | 25.818 | 275 | 176 | 7 | 21 | 283 | 6 | 264 | 3.95e-27 | 106 |
| Msa1042130 | MtrunA17_Chr1g0189621 | 26.715 | 277 | 170 | 11 | 21 | 283 | 6 | 263 | 1.81e-26 | 104 |
| Msa1042130 | MtrunA17_Chr1g0189821 | 24.727 | 275 | 184 | 6 | 21 | 285 | 6 | 267 | 3.32e-26 | 104 |
| Msa1042130 | MtrunA17_Chr1g0189591 | 37.762 | 143 | 86 | 2 | 21 | 160 | 15 | 157 | 7.57e-26 | 104 |
| Msa1042130 | MtrunA17_Chr1g0189751 | 26.715 | 277 | 175 | 7 | 19 | 283 | 4 | 264 | 1.54e-25 | 103 |
| Msa1042130 | MtrunA17_Chr7g0272091 | 24.742 | 291 | 180 | 7 | 18 | 283 | 6 | 282 | 6.80e-25 | 101 |
| Msa1042130 | MtrunA17_Chr1g0189641 | 24.823 | 282 | 178 | 6 | 21 | 283 | 6 | 272 | 5.28e-24 | 98.6 |
| Msa1042130 | MtrunA17_Chr1g0203331 | 26.971 | 241 | 140 | 5 | 35 | 253 | 5 | 231 | 1.27e-23 | 96.7 |
| Msa1042130 | MtrunA17_Chr3g0097191 | 25.182 | 274 | 179 | 5 | 19 | 283 | 10 | 266 | 3.70e-22 | 93.2 |
| Msa1042130 | MtrunA17_Chr1g0190071 | 24.490 | 294 | 176 | 8 | 21 | 285 | 6 | 282 | 3.69e-21 | 90.9 |
| Msa1042130 | MtrunA17_Chr1g0189771 | 32.414 | 145 | 95 | 2 | 22 | 163 | 15 | 159 | 6.88e-21 | 87.8 |
| Msa1042130 | MtrunA17_Chr1g0189781 | 31.757 | 148 | 92 | 3 | 22 | 163 | 11 | 155 | 1.46e-19 | 86.3 |
| Msa1042130 | MtrunA17_Chr3g0095261 | 24.286 | 280 | 190 | 7 | 19 | 283 | 10 | 282 | 1.64e-17 | 80.9 |
| Msa1042130 | MtrunA17_Chr7g0260801 | 25.177 | 282 | 175 | 8 | 21 | 290 | 18 | 275 | 1.03e-16 | 78.6 |
| Msa1042130 | MtrunA17_Chr1g0189661 | 25.965 | 285 | 180 | 8 | 21 | 285 | 6 | 279 | 3.43e-16 | 77.4 |
| Msa1042130 | MtrunA17_Chr1g0189711 | 24.514 | 257 | 158 | 8 | 18 | 253 | 3 | 244 | 6.46e-14 | 70.5 |
| Msa1042130 | MtrunA17_Chr3g0078331 | 22.222 | 216 | 142 | 5 | 21 | 223 | 19 | 221 | 9.60e-13 | 67.4 |
| Msa1042130 | MtrunA17_Chr1g0189541 | 26.667 | 180 | 101 | 6 | 115 | 283 | 24 | 183 | 7.84e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042130 | AT3G53000.1 | 69.565 | 299 | 87 | 3 | 1 | 296 | 1 | 298 | 1.57e-155 | 436 |
| Msa1042130 | AT3G61060.1 | 56.554 | 267 | 106 | 1 | 19 | 285 | 25 | 281 | 4.04e-110 | 321 |
| Msa1042130 | AT3G61060.2 | 56.716 | 268 | 105 | 2 | 19 | 285 | 25 | 282 | 5.99e-109 | 318 |
| Msa1042130 | AT1G12710.1 | 52.805 | 303 | 113 | 5 | 1 | 289 | 1 | 287 | 8.69e-107 | 312 |
| Msa1042130 | AT1G12710.2 | 46.377 | 345 | 113 | 6 | 1 | 289 | 1 | 329 | 2.54e-98 | 292 |
| Msa1042130 | AT1G63090.1 | 51.916 | 287 | 125 | 3 | 4 | 289 | 11 | 285 | 5.10e-98 | 290 |
| Msa1042130 | AT5G52120.1 | 45.791 | 297 | 135 | 3 | 8 | 289 | 1 | 286 | 1.23e-90 | 271 |
| Msa1042130 | AT2G02360.1 | 26.667 | 270 | 176 | 7 | 23 | 286 | 18 | 271 | 1.07e-27 | 108 |
| Msa1042130 | AT2G02340.1 | 27.425 | 299 | 178 | 10 | 9 | 287 | 26 | 305 | 4.75e-27 | 107 |
| Msa1042130 | AT2G02240.1 | 26.599 | 297 | 180 | 9 | 5 | 285 | 44 | 318 | 2.36e-26 | 106 |
| Msa1042130 | AT2G02230.1 | 36.424 | 151 | 88 | 3 | 14 | 162 | 27 | 171 | 7.69e-26 | 105 |
| Msa1042130 | AT1G09155.1 | 26.510 | 298 | 178 | 10 | 22 | 291 | 3 | 287 | 7.49e-25 | 101 |
| Msa1042130 | AT1G80110.1 | 23.810 | 273 | 182 | 5 | 19 | 283 | 1 | 255 | 2.10e-23 | 96.7 |
| Msa1042130 | AT2G02250.1 | 34.395 | 157 | 96 | 4 | 10 | 163 | 36 | 188 | 4.36e-23 | 97.1 |
| Msa1042130 | AT5G24560.1 | 32.143 | 140 | 91 | 1 | 21 | 160 | 5 | 140 | 3.10e-22 | 92.0 |
| Msa1042130 | AT2G02350.2 | 30.464 | 151 | 100 | 3 | 10 | 159 | 15 | 161 | 5.22e-22 | 94.0 |
| Msa1042130 | AT2G02310.1 | 25.714 | 280 | 176 | 9 | 21 | 287 | 47 | 307 | 4.56e-21 | 91.3 |
| Msa1042130 | AT1G56240.1 | 24.830 | 294 | 180 | 7 | 22 | 287 | 4 | 284 | 2.76e-20 | 89.0 |
| Msa1042130 | AT1G56250.1 | 24.828 | 290 | 177 | 7 | 22 | 283 | 4 | 280 | 9.89e-20 | 87.4 |
| Msa1042130 | AT2G02320.1 | 24.579 | 297 | 188 | 10 | 4 | 285 | 25 | 300 | 5.98e-19 | 85.5 |
| Msa1042130 | AT2G02300.1 | 33.117 | 154 | 96 | 4 | 11 | 163 | 28 | 175 | 4.53e-17 | 80.1 |
| Msa1042130 | AT4G19840.1 | 30.603 | 232 | 124 | 11 | 62 | 285 | 44 | 246 | 1.23e-12 | 66.6 |
Find 100 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTTGTTAAGGTAATTT+AGG | 0.218817 | 7_1:-79885879 | Msa1042130:three_prime_UTR |
| ACTCGCTCGCGTGCGTGTTA+TGG | 0.238373 | 7_1:-79888680 | Msa1042130:exon |
| TAGTTGTCGTTGAAATAATT+TGG | 0.246489 | 7_1:+79888759 | None:intergenic |
| GCGAAAGGTTTGTCTATTAC+TGG | 0.248170 | 7_1:-79888215 | Msa1042130:CDS |
| TCAACGTTCTTCTCTTACTA+TGG | 0.253730 | 7_1:-79888719 | Msa1042130:five_prime_UTR |
| CTGCTTCCGCTGATTCCGTT+TGG | 0.279164 | 7_1:-79888507 | Msa1042130:CDS |
| TGCTTCCGCTGATTCCGTTT+GGG | 0.281862 | 7_1:-79888506 | Msa1042130:CDS |
| AAGATCCCAACAAAGTATTC+TGG | 0.282202 | 7_1:+79885911 | None:intergenic |
| CTAACTATCAACATCTTCTA+AGG | 0.282361 | 7_1:-79888468 | Msa1042130:CDS |
| TTCCGACAGCGTAGTTCTTC+GGG | 0.292375 | 7_1:+79888439 | None:intergenic |
| TAGCATATTTGCAGCAAATA+TGG | 0.292809 | 7_1:-79886421 | Msa1042130:CDS |
| TTGTGGCTTGATAGGGTTAC+TGG | 0.305604 | 7_1:-79888260 | Msa1042130:CDS |
| ATAATTATACTCTCTCCTTT+AGG | 0.320102 | 7_1:-79886355 | Msa1042130:CDS |
| GGTGCTTCGTTGTCGAATCT+TGG | 0.327372 | 7_1:-79888658 | Msa1042130:CDS |
| ATTCCGACAGCGTAGTTCTT+CGG | 0.334823 | 7_1:+79888438 | None:intergenic |
| TACGCGCCGACCGAGTCTTT+TGG | 0.340105 | 7_1:+79886313 | None:intergenic |
| TCATTTCCCTGCTGTTCTAT+AGG | 0.348895 | 7_1:-79885788 | Msa1042130:three_prime_UTR |
| TAGGGTTTGCATGTCAATTT+CGG | 0.355678 | 7_1:-79888237 | Msa1042130:CDS |
| GCAATCATAAGCGTGGATAT+TGG | 0.361605 | 7_1:-79886166 | Msa1042130:CDS |
| CAATCATAAGCGTGGATATT+GGG | 0.364455 | 7_1:-79886165 | Msa1042130:CDS |
| TGCAGCAATTGTGGCTTGAT+AGG | 0.373892 | 7_1:-79888268 | Msa1042130:intron |
| ACCGTTTGATGATGGTAATA+AGG | 0.383826 | 7_1:-79888374 | Msa1042130:intron |
| TGTACAGTCAATCTGTTTCA+TGG | 0.389000 | 7_1:+79886079 | None:intergenic |
| TTTGATCCCAACCATGGGTC+TGG | 0.400313 | 7_1:+79886279 | None:intergenic |
| GAATTGATGATCGGAGATAC+TGG | 0.406343 | 7_1:-79888193 | Msa1042130:CDS |
| AGAAGATGTTGATAGTTAGA+AGG | 0.406652 | 7_1:+79888472 | None:intergenic |
| TTACACAGCTACCTTTGTTA+AGG | 0.413923 | 7_1:-79885888 | Msa1042130:three_prime_UTR |
| GTGGCGTGGGAACATGTTAT+TGG | 0.416980 | 7_1:+79888823 | None:intergenic |
| AATATCCCAGAATACTTTGT+TGG | 0.417409 | 7_1:-79885917 | Msa1042130:three_prime_UTR |
| TCAGGGATGTCGCCGAGACT+TGG | 0.421026 | 7_1:+79888613 | None:intergenic |
| GGGTTCCTACTGAAGAATCT+AGG | 0.427818 | 7_1:-79888166 | Msa1042130:intron |
| GAAATGATCAGACATAGAAT+AGG | 0.429253 | 7_1:-79885976 | Msa1042130:exon |
| GCTTGATAGGGTTACTGGTA+GGG | 0.443412 | 7_1:-79888255 | Msa1042130:CDS |
| GGCTTGATAGGGTTACTGGT+AGG | 0.446268 | 7_1:-79888256 | Msa1042130:CDS |
| AGATCCCAACAAAGTATTCT+GGG | 0.449929 | 7_1:+79885912 | None:intergenic |
| GTATAATTATCAGCAGGAAA+TGG | 0.451382 | 7_1:+79886368 | None:intergenic |
| GCGAGCTAAGTTACAAATCT+CGG | 0.453621 | 7_1:+79888552 | None:intergenic |
| ATATCCCAGAATACTTTGTT+GGG | 0.456744 | 7_1:-79885916 | Msa1042130:three_prime_UTR |
| GCTGTCAACTTCAGATGGTC+AGG | 0.460205 | 7_1:-79886240 | Msa1042130:CDS |
| ATGATCGGAGATACTGGACT+TGG | 0.466267 | 7_1:-79888187 | Msa1042130:CDS |
| AAATGATCAGACATAGAATA+GGG | 0.473844 | 7_1:-79885975 | Msa1042130:exon |
| AAAGCTGAGTTGGTATGATT+TGG | 0.475575 | 7_1:+79888799 | None:intergenic |
| CTCTCCTTTAGGCTTCACCT+TGG | 0.478658 | 7_1:-79886344 | Msa1042130:CDS |
| GTGGGTGAGTTTATTGTGAC+TGG | 0.484846 | 7_1:-79886131 | Msa1042130:CDS |
| AGCATCATCTGAGTGCTGCT+TGG | 0.485935 | 7_1:-79886216 | Msa1042130:CDS |
| GCAGCAATTGTGGCTTGATA+GGG | 0.487718 | 7_1:-79888267 | Msa1042130:intron |
| TAAGGTAATTTAGGATGTGA+TGG | 0.489704 | 7_1:-79885870 | Msa1042130:three_prime_UTR |
| TGACAAACCTATAGAACAGC+AGG | 0.491660 | 7_1:+79885781 | None:intergenic |
| GTTGACAGCTTAAATATGAC+TGG | 0.492659 | 7_1:+79886254 | None:intergenic |
| TTACCATCATCAAACGGTAA+AGG | 0.493520 | 7_1:+79888379 | None:intergenic |
| TGGAGCGATGGTTGAACCGT+TGG | 0.500130 | 7_1:+79888633 | None:intergenic |
| TGGTATGATTTGGTGTGGCG+TGG | 0.502514 | 7_1:+79888809 | None:intergenic |
| TGCATGTCAATTTCGGCGAA+AGG | 0.505228 | 7_1:-79888230 | Msa1042130:CDS |
| AAACCTTTACCGTTTGATGA+TGG | 0.507236 | 7_1:-79888382 | Msa1042130:CDS |
| CGAGCTAAGTTACAAATCTC+GGG | 0.515282 | 7_1:+79888553 | None:intergenic |
| TCAACCATCGCTCCAAGTCT+CGG | 0.520611 | 7_1:-79888625 | Msa1042130:CDS |
| ATTGACTGTACACATTCAAA+AGG | 0.523702 | 7_1:-79886068 | Msa1042130:CDS |
| TTGAGAGACCGCAAGGGAGG+CGG | 0.525474 | 7_1:-79886005 | Msa1042130:CDS |
| ATATGGTGGTTTGAAGTGGA+TGG | 0.529067 | 7_1:-79886404 | Msa1042130:CDS |
| CTATGACCAGACCCATGGTT+GGG | 0.529358 | 7_1:-79886285 | Msa1042130:CDS |
| TATGGTGGTTTGAAGTGGAT+GGG | 0.530496 | 7_1:-79886403 | Msa1042130:CDS |
| GAGAGAGTATAATTATCAGC+AGG | 0.530526 | 7_1:+79886362 | None:intergenic |
| ATGTAAATGTAAAGCTGAGT+TGG | 0.530610 | 7_1:+79888789 | None:intergenic |
| TCGTCCAAGGTGAAGCCTAA+AGG | 0.536499 | 7_1:+79886340 | None:intergenic |
| TTGCGGTCTCTCAACTCGCT+AGG | 0.541840 | 7_1:+79886014 | None:intergenic |
| ACCTTATTACCATCATCAAA+CGG | 0.548291 | 7_1:+79888373 | None:intergenic |
| GTTATTGGCGTCAACATCAA+AGG | 0.548839 | 7_1:+79888838 | None:intergenic |
| TTGTCGAATCTTGGATCCAA+CGG | 0.552308 | 7_1:-79888649 | Msa1042130:CDS |
| TTTAAGCTGTCAACTTCAGA+TGG | 0.554061 | 7_1:-79886245 | Msa1042130:CDS |
| CTATTACTGGAATTGATGAT+CGG | 0.557562 | 7_1:-79888202 | Msa1042130:CDS |
| TTGTCGTTGAAATAATTTGG+TGG | 0.561692 | 7_1:+79888762 | None:intergenic |
| TGGATATTGGGTAGATTACA+AGG | 0.565259 | 7_1:-79886153 | Msa1042130:CDS |
| CATATTTGCAGCAAATATGG+TGG | 0.572697 | 7_1:-79886418 | Msa1042130:CDS |
| GCAAATATGGTGGTTTGAAG+TGG | 0.575682 | 7_1:-79886408 | Msa1042130:CDS |
| TATTGGGTAGATTACAAGGT+GGG | 0.580797 | 7_1:-79886149 | Msa1042130:CDS |
| TAGCGAGTTGAGAGACCGCA+AGG | 0.584165 | 7_1:-79886012 | Msa1042130:CDS |
| ATGGTGGTTTGAAGTGGATG+GGG | 0.588532 | 7_1:-79886402 | Msa1042130:CDS |
| GTCGCCGAGACTTGGAGCGA+TGG | 0.591097 | 7_1:+79888621 | None:intergenic |
| TGTAACCTAGATTCTTCAGT+AGG | 0.600640 | 7_1:+79888161 | None:intergenic |
| AGGTAACTTAGATTCCCAAA+CGG | 0.601089 | 7_1:+79888492 | None:intergenic |
| TGCAGCTATGACCAGACCCA+TGG | 0.603310 | 7_1:-79886290 | Msa1042130:CDS |
| GCTATGACCAGACCCATGGT+TGG | 0.608469 | 7_1:-79886286 | Msa1042130:CDS |
| ACTGTCCACGATGATACATA+CGG | 0.613314 | 7_1:-79886188 | Msa1042130:CDS |
| GGTATGATTTGGTGTGGCGT+GGG | 0.615776 | 7_1:+79888810 | None:intergenic |
| GAGTTGAGAGACCGCAAGGG+AGG | 0.616169 | 7_1:-79886008 | Msa1042130:CDS |
| ATCCTAAATTACCTTAACAA+AGG | 0.629176 | 7_1:+79885877 | None:intergenic |
| GTGGTTTGAAGTGGATGGGG+AGG | 0.629340 | 7_1:-79886399 | Msa1042130:CDS |
| TGCCCGAAGAACTACGCTGT+CGG | 0.632314 | 7_1:-79888441 | Msa1042130:CDS |
| GACTGTACACATTCAAAAGG+TGG | 0.636157 | 7_1:-79886065 | Msa1042130:CDS |
| TGATCGGAGATACTGGACTT+GGG | 0.644140 | 7_1:-79888186 | Msa1042130:CDS |
| TGAGTTGGTATGATTTGGTG+TGG | 0.650250 | 7_1:+79888804 | None:intergenic |
| AGCGAGTTGAGAGACCGCAA+GGG | 0.651355 | 7_1:-79886011 | Msa1042130:CDS |
| AGATTCCCAAACGGAATCAG+CGG | 0.656920 | 7_1:+79888501 | None:intergenic |
| ACATACGGCAATCATAAGCG+TGG | 0.659891 | 7_1:-79886173 | Msa1042130:CDS |
| GACAAACCTATAGAACAGCA+GGG | 0.676920 | 7_1:+79885782 | None:intergenic |
| GATTGCCGTATGTATCATCG+TGG | 0.696598 | 7_1:+79886183 | None:intergenic |
| GCTAAGTTACAAATCTCGGG+AGG | 0.700399 | 7_1:+79888556 | None:intergenic |
| TAAATACAGAATCTACACAA+AGG | 0.700993 | 7_1:+79886042 | None:intergenic |
| TGGGATATTTGACATCACCA+AGG | 0.706573 | 7_1:+79885931 | None:intergenic |
| ATATTGGGTAGATTACAAGG+TGG | 0.766319 | 7_1:-79886150 | Msa1042130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTACCT+TGG | - | chr7_1:79888642-79888661 | Msa1042130:CDS | 10.0% |
| !! | TGTAATTAAAAACAAGTATT+GGG | + | chr7_1:79886551-79886570 | None:intergenic | 15.0% |
| !! | TTGTAATTAAAAACAAGTAT+TGG | + | chr7_1:79886552-79886571 | None:intergenic | 15.0% |
| !! | TTTCATAAGTTAAATTAAGA+TGG | - | chr7_1:79886690-79886709 | Msa1042130:intron | 15.0% |
| !! | AATTAAGATGGAAATATTAT+TGG | - | chr7_1:79886702-79886721 | Msa1042130:intron | 15.0% |
| !!! | AAAAAATATGTTGACTTTTA+AGG | - | chr7_1:79887127-79887146 | Msa1042130:intron | 15.0% |
| !!! | TTGTAAACTTAATTTTCAAT+GGG | - | chr7_1:79887325-79887344 | Msa1042130:intron | 15.0% |
| !! | GTTTATTGTTTCAAATCATT+CGG | - | chr7_1:79886268-79886287 | Msa1042130:CDS | 20.0% |
| !!! | TTTTTATTGATGATGGAATT+AGG | - | chr7_1:79886295-79886314 | Msa1042130:CDS | 20.0% |
| !! | ATTACAAGACTTGAAATATT+TGG | + | chr7_1:79886843-79886862 | None:intergenic | 20.0% |
| !!! | TTAAATTCTTTTAATCCAAG+AGG | - | chr7_1:79887000-79887019 | Msa1042130:intron | 20.0% |
| !!! | GTTGTAAACTTAATTTTCAA+TGG | - | chr7_1:79887324-79887343 | Msa1042130:intron | 20.0% |
| !! | AATTCAATTGAACTGTTAAT+TGG | - | chr7_1:79887413-79887432 | Msa1042130:intron | 20.0% |
| !! | ATTCAATTGAACTGTTAATT+GGG | - | chr7_1:79887414-79887433 | Msa1042130:intron | 20.0% |
| !! | TTAATAAAACATCAACATGT+AGG | - | chr7_1:79887928-79887947 | Msa1042130:intron | 20.0% |
| !! | TTTCTATTATCATTCATTTC+AGG | - | chr7_1:79888136-79888155 | Msa1042130:intron | 20.0% |
| ! | TAGTTGTCGTTGAAATAATT+TGG | + | chr7_1:79885834-79885853 | None:intergenic | 25.0% |
| !!! | CGGTTTATTTTTATTGATGA+TGG | - | chr7_1:79886288-79886307 | Msa1042130:CDS | 25.0% |
| !!! | CTTTTTCTCACATTTAAAGT+TGG | - | chr7_1:79886510-79886529 | Msa1042130:intron | 25.0% |
| !!! | TAATTTTTGAGAGCATGTTT+GGG | - | chr7_1:79886575-79886594 | Msa1042130:intron | 25.0% |
| ! | AGTTTATTTACAGTTTAGCT+AGG | + | chr7_1:79886799-79886818 | None:intergenic | 25.0% |
| ! | ACTTGAAATATTTGGATCTT+AGG | + | chr7_1:79886835-79886854 | None:intergenic | 25.0% |
| !!! | ATTTTGAGATAAGTGGAAAT+TGG | - | chr7_1:79886962-79886981 | Msa1042130:intron | 25.0% |
| ! | TGGAAATTGGATTATTACTT+TGG | - | chr7_1:79886975-79886994 | Msa1042130:intron | 25.0% |
| ! | ACTCTTGAATATAGTCTTTA+TGG | - | chr7_1:79887050-79887069 | Msa1042130:intron | 25.0% |
| ! | TTGAATATAGTCTTTATGGT+TGG | - | chr7_1:79887054-79887073 | Msa1042130:intron | 25.0% |
| ! | GATAGACAAATTATTGTAAG+AGG | - | chr7_1:79887798-79887817 | Msa1042130:intron | 25.0% |
| !!! | ATTGGAATAGTTTTACGAAT+GGG | + | chr7_1:79888003-79888022 | None:intergenic | 25.0% |
| ! | ATAATTATACTCTCTCCTTT+AGG | - | chr7_1:79888235-79888254 | Msa1042130:CDS | 25.0% |
| ! | TAAATACAGAATCTACACAA+AGG | + | chr7_1:79888551-79888570 | None:intergenic | 25.0% |
| ! | AAATGATCAGACATAGAATA+GGG | - | chr7_1:79888615-79888634 | Msa1042130:CDS | 25.0% |
| ! | TACCTTTGTTAAGGTAATTT+AGG | - | chr7_1:79888711-79888730 | Msa1042130:five_prime_UTR | 25.0% |
| ! | ATCCTAAATTACCTTAACAA+AGG | + | chr7_1:79888716-79888735 | None:intergenic | 25.0% |
| ATGTAAATGTAAAGCTGAGT+TGG | + | chr7_1:79885804-79885823 | None:intergenic | 30.0% | |
| TTGTCGTTGAAATAATTTGG+TGG | + | chr7_1:79885831-79885850 | None:intergenic | 30.0% | |
| !! | AGAAGATGTTGATAGTTAGA+AGG | + | chr7_1:79886121-79886140 | None:intergenic | 30.0% |
| CTAACTATCAACATCTTCTA+AGG | - | chr7_1:79886122-79886141 | Msa1042130:CDS | 30.0% | |
| ACCTTATTACCATCATCAAA+CGG | + | chr7_1:79886220-79886239 | None:intergenic | 30.0% | |
| !! | TTTGATGATGGTAATAAGGT+AGG | - | chr7_1:79886220-79886239 | Msa1042130:CDS | 30.0% |
| !! | TTGATGATGGTAATAAGGTA+GGG | - | chr7_1:79886221-79886240 | Msa1042130:CDS | 30.0% |
| ! | CTATTACTGGAATTGATGAT+CGG | - | chr7_1:79886388-79886407 | Msa1042130:CDS | 30.0% |
| !! | GTAATTTTTGAGAGCATGTT+TGG | - | chr7_1:79886574-79886593 | Msa1042130:intron | 30.0% |
| !!! | GCTTGTAATTTTGAGATAAG+TGG | - | chr7_1:79886955-79886974 | Msa1042130:intron | 30.0% |
| CAACTCTTCTTGAAATTGAA+TGG | + | chr7_1:79887160-79887179 | None:intergenic | 30.0% | |
| ! | TATTTCTCTGGTTCAAACAT+AGG | - | chr7_1:79887201-79887220 | Msa1042130:intron | 30.0% |
| CAACAAAACACATAGAATCA+GGG | + | chr7_1:79887278-79887297 | None:intergenic | 30.0% | |
| ACAACAAAACACATAGAATC+AGG | + | chr7_1:79887279-79887298 | None:intergenic | 30.0% | |
| ATTATAATTGAGCCTCCTAA+AGG | - | chr7_1:79887591-79887610 | Msa1042130:intron | 30.0% | |
| ! | AACATCTTGTTATCAATGCT+AGG | - | chr7_1:79887657-79887676 | Msa1042130:intron | 30.0% |
| ! | ACATCTTGTTATCAATGCTA+GGG | - | chr7_1:79887658-79887677 | Msa1042130:intron | 30.0% |
| ATTAACCTGTGTTACACTAT+AGG | + | chr7_1:79887845-79887864 | None:intergenic | 30.0% | |
| ATTAACCTGTGTTACACTAT+AGG | + | chr7_1:79887845-79887864 | None:intergenic | 30.0% | |
| AAAACATCAACATGTAGGTT+TGG | - | chr7_1:79887933-79887952 | Msa1042130:intron | 30.0% | |
| !! | AATAGTTTTACGAATGGGAA+TGG | + | chr7_1:79887998-79888017 | None:intergenic | 30.0% |
| !! | GATTGGAATAGTTTTACGAA+TGG | + | chr7_1:79888004-79888023 | None:intergenic | 30.0% |
| ATAGCTTATAAGCAGTAGAT+TGG | + | chr7_1:79888021-79888040 | None:intergenic | 30.0% | |
| ! | CTTAATAGTGCTACTATTAC+TGG | + | chr7_1:79888056-79888075 | None:intergenic | 30.0% |
| TAGCATATTTGCAGCAAATA+TGG | - | chr7_1:79888169-79888188 | Msa1042130:CDS | 30.0% | |
| GTATAATTATCAGCAGGAAA+TGG | + | chr7_1:79888225-79888244 | None:intergenic | 30.0% | |
| !! | GAGAATCTAACTTTTGTTGT+AGG | + | chr7_1:79888492-79888511 | None:intergenic | 30.0% |
| ATTGACTGTACACATTCAAA+AGG | - | chr7_1:79888522-79888541 | Msa1042130:CDS | 30.0% | |
| GAAATGATCAGACATAGAAT+AGG | - | chr7_1:79888614-79888633 | Msa1042130:CDS | 30.0% | |
| AATATCCCAGAATACTTTGT+TGG | - | chr7_1:79888673-79888692 | Msa1042130:exon | 30.0% | |
| ATATCCCAGAATACTTTGTT+GGG | - | chr7_1:79888674-79888693 | Msa1042130:exon | 30.0% | |
| ! | TAAGGTAATTTAGGATGTGA+TGG | - | chr7_1:79888720-79888739 | Msa1042130:five_prime_UTR | 30.0% |
| !! | AAAGCTGAGTTGGTATGATT+TGG | + | chr7_1:79885794-79885813 | None:intergenic | 35.0% |
| TCAACGTTCTTCTCTTACTA+TGG | - | chr7_1:79885871-79885890 | Msa1042130:three_prime_UTR | 35.0% | |
| AGGTAACTTAGATTCCCAAA+CGG | + | chr7_1:79886101-79886120 | None:intergenic | 35.0% | |
| AAACCTTTACCGTTTGATGA+TGG | - | chr7_1:79886208-79886227 | Msa1042130:CDS | 35.0% | |
| TTACCATCATCAAACGGTAA+AGG | + | chr7_1:79886214-79886233 | None:intergenic | 35.0% | |
| !! | ACCGTTTGATGATGGTAATA+AGG | - | chr7_1:79886216-79886235 | Msa1042130:CDS | 35.0% |
| ! | TTAGGTTTTTGCAGCAATTG+TGG | - | chr7_1:79886313-79886332 | Msa1042130:CDS | 35.0% |
| TAGGGTTTGCATGTCAATTT+CGG | - | chr7_1:79886353-79886372 | Msa1042130:CDS | 35.0% | |
| TGTAACCTAGATTCTTCAGT+AGG | + | chr7_1:79886432-79886451 | None:intergenic | 35.0% | |
| TTTGGATCTTAGGATGCATT+AGG | + | chr7_1:79886825-79886844 | None:intergenic | 35.0% | |
| GGAATTGTTGAGACTATAAC+AGG | + | chr7_1:79886900-79886919 | None:intergenic | 35.0% | |
| TAGTCTCAACAATTCCTGAT+TGG | - | chr7_1:79886904-79886923 | Msa1042130:intron | 35.0% | |
| TTTAATCCAAGAGGATTGCT+AGG | - | chr7_1:79887009-79887028 | Msa1042130:intron | 35.0% | |
| CAATGGGAATGTTAAATTGC+TGG | - | chr7_1:79887341-79887360 | Msa1042130:intron | 35.0% | |
| GGCAGTGTAGTTTCTAATAT+TGG | + | chr7_1:79887526-79887545 | None:intergenic | 35.0% | |
| AAACTGCATCTATAGTGAGA+AGG | + | chr7_1:79887547-79887566 | None:intergenic | 35.0% | |
| CAGGTTAATCTCACAGAAAA+AGG | - | chr7_1:79887891-79887910 | Msa1042130:intron | 35.0% | |
| TACGAATGGGAATGGAAATT+TGG | + | chr7_1:79887990-79888009 | None:intergenic | 35.0% | |
| CATATTTGCAGCAAATATGG+TGG | - | chr7_1:79888172-79888191 | Msa1042130:CDS | 35.0% | |
| ! | GAGAGAGTATAATTATCAGC+AGG | + | chr7_1:79888231-79888250 | None:intergenic | 35.0% |
| GTTGACAGCTTAAATATGAC+TGG | + | chr7_1:79888339-79888358 | None:intergenic | 35.0% | |
| TTTAAGCTGTCAACTTCAGA+TGG | - | chr7_1:79888345-79888364 | Msa1042130:intron | 35.0% | |
| CAATCATAAGCGTGGATATT+GGG | - | chr7_1:79888425-79888444 | Msa1042130:CDS | 35.0% | |
| TGGATATTGGGTAGATTACA+AGG | - | chr7_1:79888437-79888456 | Msa1042130:CDS | 35.0% | |
| ATATTGGGTAGATTACAAGG+TGG | - | chr7_1:79888440-79888459 | Msa1042130:CDS | 35.0% | |
| TATTGGGTAGATTACAAGGT+GGG | - | chr7_1:79888441-79888460 | Msa1042130:CDS | 35.0% | |
| TGTACAGTCAATCTGTTTCA+TGG | + | chr7_1:79888514-79888533 | None:intergenic | 35.0% | |
| ! | AGATCCCAACAAAGTATTCT+GGG | + | chr7_1:79888681-79888700 | None:intergenic | 35.0% |
| ! | AAGATCCCAACAAAGTATTC+TGG | + | chr7_1:79888682-79888701 | None:intergenic | 35.0% |
| TTACACAGCTACCTTTGTTA+AGG | - | chr7_1:79888702-79888721 | Msa1042130:five_prime_UTR | 35.0% | |
| GTTATTGGCGTCAACATCAA+AGG | + | chr7_1:79885755-79885774 | None:intergenic | 40.0% | |
| !! | TGAGTTGGTATGATTTGGTG+TGG | + | chr7_1:79885789-79885808 | None:intergenic | 40.0% |
| TTGTCGAATCTTGGATCCAA+CGG | - | chr7_1:79885941-79885960 | Msa1042130:three_prime_UTR | 40.0% | |
| CGAGCTAAGTTACAAATCTC+GGG | + | chr7_1:79886040-79886059 | None:intergenic | 40.0% | |
| GCGAGCTAAGTTACAAATCT+CGG | + | chr7_1:79886041-79886060 | None:intergenic | 40.0% | |
| GCGAAAGGTTTGTCTATTAC+TGG | - | chr7_1:79886375-79886394 | Msa1042130:CDS | 40.0% | |
| ! | GAATTGATGATCGGAGATAC+TGG | - | chr7_1:79886397-79886416 | Msa1042130:CDS | 40.0% |
| !! | CAATTCCTGATTGGTTTGCT+TGG | - | chr7_1:79886913-79886932 | Msa1042130:intron | 40.0% |
| ACAAACCAAGCAAACCAATC+AGG | + | chr7_1:79886921-79886940 | None:intergenic | 40.0% | |
| !! | GCGACTTGCTAATATTTCTC+TGG | - | chr7_1:79887189-79887208 | Msa1042130:intron | 40.0% |
| ! | TGCGACATTTTACTGATGAC+CGG | - | chr7_1:79887566-79887585 | Msa1042130:intron | 40.0% |
| GGAGGCTCAATTATAATTGC+CGG | + | chr7_1:79887588-79887607 | None:intergenic | 40.0% | |
| !!! | TTTGCGACTTTTGGTGTCAT+AGG | - | chr7_1:79887622-79887641 | Msa1042130:intron | 40.0% |
| CGAAGTTTAGCAGAACTTGT+TGG | - | chr7_1:79887753-79887772 | Msa1042130:intron | 40.0% | |
| TACAGCCTATAGTGTAACAC+AGG | - | chr7_1:79887872-79887891 | Msa1042130:intron | 40.0% | |
| CTGCTCTGCGTAGTTTATTA+TGG | - | chr7_1:79887956-79887975 | Msa1042130:intron | 40.0% | |
| GCAAATATGGTGGTTTGAAG+TGG | - | chr7_1:79888182-79888201 | Msa1042130:CDS | 40.0% | |
| ! | ATATGGTGGTTTGAAGTGGA+TGG | - | chr7_1:79888186-79888205 | Msa1042130:CDS | 40.0% |
| ! | TATGGTGGTTTGAAGTGGAT+GGG | - | chr7_1:79888187-79888206 | Msa1042130:CDS | 40.0% |
| !! | GTCTTTTGGAAAATCGTCCA+AGG | + | chr7_1:79888266-79888285 | None:intergenic | 40.0% |
| ! | GGACGATTTTCCAAAAGACT+CGG | - | chr7_1:79888267-79888286 | Msa1042130:intron | 40.0% |
| !! | GATTTTCCAAAAGACTCGGT+CGG | - | chr7_1:79888271-79888290 | Msa1042130:intron | 40.0% |
| ACTGTCCACGATGATACATA+CGG | - | chr7_1:79888402-79888421 | Msa1042130:CDS | 40.0% | |
| GCAATCATAAGCGTGGATAT+TGG | - | chr7_1:79888424-79888443 | Msa1042130:CDS | 40.0% | |
| GACTGTACACATTCAAAAGG+TGG | - | chr7_1:79888525-79888544 | Msa1042130:CDS | 40.0% | |
| TGGGATATTTGACATCACCA+AGG | + | chr7_1:79888662-79888681 | None:intergenic | 40.0% | |
| TCATTTCCCTGCTGTTCTAT+AGG | - | chr7_1:79888802-79888821 | Msa1042130:five_prime_UTR | 40.0% | |
| GACAAACCTATAGAACAGCA+GGG | + | chr7_1:79888811-79888830 | None:intergenic | 40.0% | |
| TGACAAACCTATAGAACAGC+AGG | + | chr7_1:79888812-79888831 | None:intergenic | 40.0% | |
| ! | CACGAGCAACACAGTTTTCA+GGG | + | chr7_1:79885997-79886016 | None:intergenic | 45.0% |
| ! | ACACGAGCAACACAGTTTTC+AGG | + | chr7_1:79885998-79886017 | None:intergenic | 45.0% |
| GCTAAGTTACAAATCTCGGG+AGG | + | chr7_1:79886037-79886056 | None:intergenic | 45.0% | |
| AGATTCCCAAACGGAATCAG+CGG | + | chr7_1:79886092-79886111 | None:intergenic | 45.0% | |
| ATTCCGACAGCGTAGTTCTT+CGG | + | chr7_1:79886155-79886174 | None:intergenic | 45.0% | |
| TGCAGCAATTGTGGCTTGAT+AGG | - | chr7_1:79886322-79886341 | Msa1042130:CDS | 45.0% | |
| GCAGCAATTGTGGCTTGATA+GGG | - | chr7_1:79886323-79886342 | Msa1042130:CDS | 45.0% | |
| TTGTGGCTTGATAGGGTTAC+TGG | - | chr7_1:79886330-79886349 | Msa1042130:CDS | 45.0% | |
| GCTTGATAGGGTTACTGGTA+GGG | - | chr7_1:79886335-79886354 | Msa1042130:CDS | 45.0% | |
| TGCATGTCAATTTCGGCGAA+AGG | - | chr7_1:79886360-79886379 | Msa1042130:CDS | 45.0% | |
| ATGATCGGAGATACTGGACT+TGG | - | chr7_1:79886403-79886422 | Msa1042130:CDS | 45.0% | |
| TGATCGGAGATACTGGACTT+GGG | - | chr7_1:79886404-79886423 | Msa1042130:CDS | 45.0% | |
| GGGTTCCTACTGAAGAATCT+AGG | - | chr7_1:79886424-79886443 | Msa1042130:CDS | 45.0% | |
| ! | TTGAGAGCATGTTTGGGCTT+TGG | - | chr7_1:79886581-79886600 | Msa1042130:intron | 45.0% |
| TGTGTTCCTAGCAATCCTCT+TGG | + | chr7_1:79887018-79887037 | None:intergenic | 45.0% | |
| !! | CAAAGAGAAGCACCTTTAGG+AGG | + | chr7_1:79887606-79887625 | None:intergenic | 45.0% |
| !! | TCGCAAAGAGAAGCACCTTT+AGG | + | chr7_1:79887609-79887628 | None:intergenic | 45.0% |
| ! | GTGCTTCTCTTTGCGACTTT+TGG | - | chr7_1:79887613-79887632 | Msa1042130:intron | 45.0% |
| TGCAGCCTATAGTGTAACAC+AGG | - | chr7_1:79887837-79887856 | Msa1042130:intron | 45.0% | |
| ! | ATGGTGGTTTGAAGTGGATG+GGG | - | chr7_1:79888188-79888207 | Msa1042130:CDS | 45.0% |
| ! | TGGCTTTTGATCCCAACCAT+GGG | + | chr7_1:79888319-79888338 | None:intergenic | 45.0% |
| GATTGCCGTATGTATCATCG+TGG | + | chr7_1:79888410-79888429 | None:intergenic | 45.0% | |
| ACATACGGCAATCATAAGCG+TGG | - | chr7_1:79888417-79888436 | Msa1042130:CDS | 45.0% | |
| GTGGGTGAGTTTATTGTGAC+TGG | - | chr7_1:79888459-79888478 | Msa1042130:CDS | 45.0% | |
| GTGGCGTGGGAACATGTTAT+TGG | + | chr7_1:79885770-79885789 | None:intergenic | 50.0% | |
| !! | GGTATGATTTGGTGTGGCGT+GGG | + | chr7_1:79885783-79885802 | None:intergenic | 50.0% |
| !! | TGGTATGATTTGGTGTGGCG+TGG | + | chr7_1:79885784-79885803 | None:intergenic | 50.0% |
| GGTGCTTCGTTGTCGAATCT+TGG | - | chr7_1:79885932-79885951 | Msa1042130:three_prime_UTR | 50.0% | |
| TCAACCATCGCTCCAAGTCT+CGG | - | chr7_1:79885965-79885984 | Msa1042130:three_prime_UTR | 50.0% | |
| ! | CGCTTAAATCGCGCTTTTCG+CGG | - | chr7_1:79886058-79886077 | Msa1042130:CDS | 50.0% |
| !! | TGCTTCCGCTGATTCCGTTT+GGG | - | chr7_1:79886084-79886103 | Msa1042130:CDS | 50.0% |
| TTCCGACAGCGTAGTTCTTC+GGG | + | chr7_1:79886154-79886173 | None:intergenic | 50.0% | |
| GGCTTGATAGGGTTACTGGT+AGG | - | chr7_1:79886334-79886353 | Msa1042130:CDS | 50.0% | |
| CGAGAACTCGTGAAGACTTC+AGG | + | chr7_1:79887735-79887754 | None:intergenic | 50.0% | |
| CTCTCCTTTAGGCTTCACCT+TGG | - | chr7_1:79888246-79888265 | Msa1042130:CDS | 50.0% | |
| TCGTCCAAGGTGAAGCCTAA+AGG | + | chr7_1:79888253-79888272 | None:intergenic | 50.0% | |
| CTATGACCAGACCCATGGTT+GGG | - | chr7_1:79888305-79888324 | Msa1042130:intron | 50.0% | |
| TTTGATCCCAACCATGGGTC+TGG | + | chr7_1:79888314-79888333 | None:intergenic | 50.0% | |
| !! | CTGGCTTTTGATCCCAACCA+TGG | + | chr7_1:79888320-79888339 | None:intergenic | 50.0% |
| GCTGTCAACTTCAGATGGTC+AGG | - | chr7_1:79888350-79888369 | Msa1042130:intron | 50.0% | |
| ! | AGCATCATCTGAGTGCTGCT+TGG | - | chr7_1:79888374-79888393 | Msa1042130:intron | 50.0% |
| TCAAAAAACCGCCTCCCTTG+CGG | + | chr7_1:79888596-79888615 | None:intergenic | 50.0% | |
| TGGAGCGATGGTTGAACCGT+TGG | + | chr7_1:79885960-79885979 | None:intergenic | 55.0% | |
| !! | CTGCTTCCGCTGATTCCGTT+TGG | - | chr7_1:79886083-79886102 | Msa1042130:CDS | 55.0% |
| TGCCCGAAGAACTACGCTGT+CGG | - | chr7_1:79886149-79886168 | Msa1042130:CDS | 55.0% | |
| ! | GTGGTTTGAAGTGGATGGGG+AGG | - | chr7_1:79888191-79888210 | Msa1042130:CDS | 55.0% |
| TGCAGCTATGACCAGACCCA+TGG | - | chr7_1:79888300-79888319 | Msa1042130:intron | 55.0% | |
| GCTATGACCAGACCCATGGT+TGG | - | chr7_1:79888304-79888323 | Msa1042130:intron | 55.0% | |
| TTGCGGTCTCTCAACTCGCT+AGG | + | chr7_1:79888579-79888598 | None:intergenic | 55.0% | |
| ! | TAGCGAGTTGAGAGACCGCA+AGG | - | chr7_1:79888578-79888597 | Msa1042130:CDS | 55.0% |
| ! | AGCGAGTTGAGAGACCGCAA+GGG | - | chr7_1:79888579-79888598 | Msa1042130:CDS | 55.0% |
| ACTCGCTCGCGTGCGTGTTA+TGG | - | chr7_1:79885910-79885929 | Msa1042130:three_prime_UTR | 60.0% | |
| CTCGCTCGCGTGCGTGTTAT+GGG | - | chr7_1:79885911-79885930 | Msa1042130:three_prime_UTR | 60.0% | |
| TCAGGGATGTCGCCGAGACT+TGG | + | chr7_1:79885980-79885999 | None:intergenic | 60.0% | |
| !! | TACGCGCCGACCGAGTCTTT+TGG | + | chr7_1:79888280-79888299 | None:intergenic | 60.0% |
| GAGTTGAGAGACCGCAAGGG+AGG | - | chr7_1:79888582-79888601 | Msa1042130:CDS | 60.0% | |
| TTGAGAGACCGCAAGGGAGG+CGG | - | chr7_1:79888585-79888604 | Msa1042130:CDS | 60.0% | |
| GTCGCCGAGACTTGGAGCGA+TGG | + | chr7_1:79885972-79885991 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 79885739 | 79888873 | 79885739 | ID=Msa1042130;Name=Msa1042130 |
| chr7_1 | mRNA | 79885739 | 79888873 | 79885739 | ID=Msa1042130-mRNA-1;Parent=Msa1042130;Name=Msa1042130-mRNA-1;_AED=0.11;_eAED=0.11;_QI=190|1|1|1|1|1|3|253|296 |
| chr7_1 | exon | 79885739 | 79886454 | 79885739 | ID=Msa1042130-mRNA-1:exon:21661;Parent=Msa1042130-mRNA-1 |
| chr7_1 | exon | 79888167 | 79888285 | 79888167 | ID=Msa1042130-mRNA-1:exon:21660;Parent=Msa1042130-mRNA-1 |
| chr7_1 | exon | 79888375 | 79888873 | 79888375 | ID=Msa1042130-mRNA-1:exon:21659;Parent=Msa1042130-mRNA-1 |
| chr7_1 | five_prime_UTR | 79888684 | 79888873 | 79888684 | ID=Msa1042130-mRNA-1:five_prime_utr;Parent=Msa1042130-mRNA-1 |
| chr7_1 | CDS | 79888375 | 79888683 | 79888375 | ID=Msa1042130-mRNA-1:cds;Parent=Msa1042130-mRNA-1 |
| chr7_1 | CDS | 79888167 | 79888285 | 79888167 | ID=Msa1042130-mRNA-1:cds;Parent=Msa1042130-mRNA-1 |
| chr7_1 | CDS | 79885992 | 79886454 | 79885992 | ID=Msa1042130-mRNA-1:cds;Parent=Msa1042130-mRNA-1 |
| chr7_1 | three_prime_UTR | 79885739 | 79885991 | 79885739 | ID=Msa1042130-mRNA-1:three_prime_utr;Parent=Msa1042130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
