Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124880 | RHN48604.1 | 97.973 | 296 | 6 | 0 | 1 | 296 | 73 | 368 | 0.0 | 609 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124880 | sp|Q9LF92|P2A15_ARATH | 69.565 | 299 | 87 | 3 | 1 | 296 | 1 | 298 | 1.54e-154 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124880 | A0A396H9X4 | 97.973 | 296 | 6 | 0 | 1 | 296 | 73 | 368 | 0.0 | 609 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa1124880 | -0.800179 | 1.626882e-48 | -8.615850e-47 |
| Msa0005690 | Msa1124880 | -0.825497 | 4.539959e-54 | -8.615850e-47 |
| Msa0021980 | Msa1124880 | -0.812933 | 3.303990e-51 | -8.615850e-47 |
| Msa0034100 | Msa1124880 | -0.800813 | 1.208457e-48 | -8.615850e-47 |
| Msa0036990 | Msa1124880 | -0.813126 | 2.996894e-51 | -8.615850e-47 |
| Msa0039610 | Msa1124880 | 0.811604 | 6.442507e-51 | -8.615850e-47 |
| Msa0053960 | Msa1124880 | -0.824766 | 6.754472e-54 | -8.615850e-47 |
| Msa0080810 | Msa1124880 | -0.802865 | 4.579545e-49 | -8.615850e-47 |
| Msa0087130 | Msa1124880 | -0.814297 | 1.655371e-51 | -8.615850e-47 |
| Msa0087250 | Msa1124880 | 0.822743 | 2.012139e-53 | -8.615850e-47 |
| Msa0091470 | Msa1124880 | -0.800881 | 1.170427e-48 | -8.615850e-47 |
| Msa0096510 | Msa1124880 | -0.823790 | 1.145597e-53 | -8.615850e-47 |
| Msa0117300 | Msa1124880 | -0.820024 | 8.533246e-53 | -8.615850e-47 |
| Msa0120320 | Msa1124880 | -0.816830 | 4.518125e-52 | -8.615850e-47 |
| Msa0607620 | Msa1124880 | -0.807042 | 6.130640e-50 | -8.615850e-47 |
| Msa0608940 | Msa1124880 | -0.812374 | 4.378958e-51 | -8.615850e-47 |
| Msa0610780 | Msa1124880 | -0.802193 | 6.301200e-49 | -8.615850e-47 |
| Msa0610810 | Msa1124880 | -0.811364 | 7.264778e-51 | -8.615850e-47 |
| Msa0649530 | Msa1124880 | -0.820804 | 5.650526e-53 | -8.615850e-47 |
| Msa0651310 | Msa1124880 | -0.818017 | 2.440397e-52 | -8.615850e-47 |
| Msa0654880 | Msa1124880 | -0.808036 | 3.772261e-50 | -8.615850e-47 |
| Msa0679780 | Msa1124880 | -0.800518 | 1.388023e-48 | -8.615850e-47 |
| Msa0691740 | Msa1124880 | -0.813740 | 2.196277e-51 | -8.615850e-47 |
| Msa0693400 | Msa1124880 | -0.805720 | 1.164863e-49 | -8.615850e-47 |
| Msa0705810 | Msa1124880 | -0.813825 | 2.104209e-51 | -8.615850e-47 |
| Msa0712670 | Msa1124880 | -0.827735 | 1.327873e-54 | -8.615850e-47 |
| Msa0714060 | Msa1124880 | -0.808250 | 3.396241e-50 | -8.615850e-47 |
| Msa0714200 | Msa1124880 | -0.811979 | 5.338866e-51 | -8.615850e-47 |
| Msa0727300 | Msa1124880 | -0.809195 | 2.133635e-50 | -8.615850e-47 |
| Msa0747900 | Msa1124880 | -0.803123 | 4.050949e-49 | -8.615850e-47 |
| Msa0748980 | Msa1124880 | -0.879260 | 1.441180e-69 | -8.615850e-47 |
| Msa0752830 | Msa1124880 | -0.817909 | 2.581557e-52 | -8.615850e-47 |
| Msa0756440 | Msa1124880 | -0.824140 | 9.486707e-54 | -8.615850e-47 |
| Msa0795400 | Msa1124880 | -0.829825 | 4.144688e-55 | -8.615850e-47 |
| Msa0813630 | Msa1124880 | -0.810146 | 1.332727e-50 | -8.615850e-47 |
| Msa0825520 | Msa1124880 | -0.886241 | 4.059611e-72 | -8.615850e-47 |
| Msa0835550 | Msa1124880 | -0.829656 | 4.556379e-55 | -8.615850e-47 |
| Msa0128110 | Msa1124880 | -0.804423 | 2.176073e-49 | -8.615850e-47 |
| Msa0131090 | Msa1124880 | -0.852211 | 5.358518e-61 | -8.615850e-47 |
| Msa0134400 | Msa1124880 | -0.822868 | 1.881673e-53 | -8.615850e-47 |
| Msa0135330 | Msa1124880 | 0.824929 | 6.183232e-54 | -8.615850e-47 |
| Msa0148430 | Msa1124880 | -0.812274 | 4.604375e-51 | -8.615850e-47 |
| Msa0160650 | Msa1124880 | -0.827004 | 1.987596e-54 | -8.615850e-47 |
| Msa0163530 | Msa1124880 | -0.811287 | 7.551647e-51 | -8.615850e-47 |
| Msa0163960 | Msa1124880 | -0.806885 | 6.618483e-50 | -8.615850e-47 |
| Msa0184750 | Msa1124880 | 0.813022 | 3.158736e-51 | -8.615850e-47 |
| Msa0225880 | Msa1124880 | -0.810371 | 1.191609e-50 | -8.615850e-47 |
| Msa0372990 | Msa1124880 | -0.817623 | 2.995443e-52 | -8.615850e-47 |
| Msa0373220 | Msa1124880 | -0.804930 | 1.704875e-49 | -8.615850e-47 |
| Msa0378670 | Msa1124880 | -0.818347 | 2.055142e-52 | -8.615850e-47 |
| Msa0378700 | Msa1124880 | -0.821173 | 4.646582e-53 | -8.615850e-47 |
| Msa0383550 | Msa1124880 | 0.838920 | 2.158117e-57 | -8.615850e-47 |
| Msa0393140 | Msa1124880 | -0.808950 | 2.407267e-50 | -8.615850e-47 |
| Msa0415200 | Msa1124880 | -0.864672 | 1.027093e-64 | -8.615850e-47 |
| Msa0419040 | Msa1124880 | -0.807245 | 5.554494e-50 | -8.615850e-47 |
| Msa0427740 | Msa1124880 | 0.802151 | 6.428808e-49 | -8.615850e-47 |
| Msa0428330 | Msa1124880 | -0.823429 | 1.391694e-53 | -8.615850e-47 |
| Msa0431940 | Msa1124880 | -0.835996 | 1.211909e-56 | -8.615850e-47 |
| Msa0433670 | Msa1124880 | -0.801096 | 1.057630e-48 | -8.615850e-47 |
| Msa0460220 | Msa1124880 | -0.810271 | 1.252524e-50 | -8.615850e-47 |
| Msa0999480 | Msa1124880 | -0.805474 | 1.311809e-49 | -8.615850e-47 |
| Msa0999590 | Msa1124880 | -0.809241 | 2.085123e-50 | -8.615850e-47 |
| Msa1031530 | Msa1124880 | -0.822472 | 2.326032e-53 | -8.615850e-47 |
| Msa1036020 | Msa1124880 | 0.804426 | 2.172131e-49 | -8.615850e-47 |
| Msa1042130 | Msa1124880 | 0.990791 | 2.426797e-184 | -8.615850e-47 |
| Msa1067910 | Msa1124880 | -0.800275 | 1.555433e-48 | -8.615850e-47 |
| Msa1071640 | Msa1124880 | -0.830689 | 2.549825e-55 | -8.615850e-47 |
| Msa1078600 | Msa1124880 | -0.803192 | 3.919443e-49 | -8.615850e-47 |
| Msa1078770 | Msa1124880 | -0.800174 | 1.631386e-48 | -8.615850e-47 |
| Msa1079970 | Msa1124880 | 0.833132 | 6.356350e-56 | -8.615850e-47 |
| Msa1083130 | Msa1124880 | 0.804306 | 2.301852e-49 | -8.615850e-47 |
| Msa1085370 | Msa1124880 | -0.807052 | 6.100613e-50 | -8.615850e-47 |
| Msa1096570 | Msa1124880 | -0.807134 | 5.863285e-50 | -8.615850e-47 |
| Msa1101300 | Msa1124880 | -0.801253 | 9.825978e-49 | -8.615850e-47 |
| Msa0260470 | Msa1124880 | -0.807273 | 5.478961e-50 | -8.615850e-47 |
| Msa0297950 | Msa1124880 | 0.812755 | 3.613497e-51 | -8.615850e-47 |
| Msa0304110 | Msa1124880 | -0.817815 | 2.712069e-52 | -8.615850e-47 |
| Msa0314980 | Msa1124880 | -0.820392 | 7.028918e-53 | -8.615850e-47 |
| Msa0341190 | Msa1124880 | -0.819461 | 1.147682e-52 | -8.615850e-47 |
| Msa1117510 | Msa1124880 | -0.818589 | 1.811486e-52 | -8.615850e-47 |
| Msa1124880 | Msa1127910 | 0.811110 | 8.245767e-51 | -8.615850e-47 |
| Msa1124880 | Msa1143860 | -0.804296 | 2.312055e-49 | -8.615850e-47 |
| Msa1124880 | Msa1158450 | -0.807609 | 4.649651e-50 | -8.615850e-47 |
| Msa1124880 | Msa1161210 | -0.836860 | 7.304940e-57 | -8.615850e-47 |
| Msa1124880 | Msa1167500 | 0.973228 | 4.493120e-136 | -8.615850e-47 |
| Msa1124880 | Msa1182400 | -0.810662 | 1.031079e-50 | -8.615850e-47 |
| Msa1124880 | Msa1194110 | 0.801508 | 8.710079e-49 | -8.615850e-47 |
| Msa1124880 | Msa1203840 | -0.803117 | 4.063118e-49 | -8.615850e-47 |
| Msa1124880 | Msa1203860 | -0.802220 | 6.221253e-49 | -8.615850e-47 |
| Msa1124880 | Msa1209160 | -0.803560 | 3.288000e-49 | -8.615850e-47 |
| Msa1124880 | Msa1219060 | -0.829929 | 3.909024e-55 | -8.615850e-47 |
| Msa1124880 | Msa1221540 | -0.810033 | 1.409244e-50 | -8.615850e-47 |
| Msa1124880 | Msa1224310 | -0.803243 | 3.825150e-49 | -8.615850e-47 |
| Msa1124880 | Msa1225140 | -0.804311 | 2.296118e-49 | -8.615850e-47 |
| Msa1124880 | Msa1236860 | -0.805472 | 1.313175e-49 | -8.615850e-47 |
| Msa1124880 | Msa1290780 | 0.819906 | 9.078397e-53 | -8.615850e-47 |
| Msa1124880 | Msa1295220 | -0.804595 | 2.003305e-49 | -8.615850e-47 |
| Msa1124880 | Msa1297220 | -0.803387 | 3.571103e-49 | -8.615850e-47 |
| Msa1124880 | Msa1317240 | -0.812347 | 4.438484e-51 | -8.615850e-47 |
| Msa1124880 | Msa1326290 | 0.801790 | 7.623474e-49 | -8.615850e-47 |
| Msa1124880 | Msa1330910 | -0.806668 | 7.354923e-50 | -8.615850e-47 |
| Msa1124880 | Msa1332690 | -0.814200 | 1.739067e-51 | -8.615850e-47 |
| Msa1124880 | Msa1334020 | -0.811400 | 7.135706e-51 | -8.615850e-47 |
| Msa1124880 | Msa1338180 | -0.812639 | 3.830749e-51 | -8.615850e-47 |
| Msa1124880 | Msa1342280 | 0.816592 | 5.108251e-52 | -8.615850e-47 |
| Msa1124880 | Msa1343450 | -0.805734 | 1.157106e-49 | -8.615850e-47 |
| Msa1124880 | Msa1348240 | -0.800814 | 1.207742e-48 | -8.615850e-47 |
| Msa1124880 | Msa1349640 | -0.813012 | 3.174776e-51 | -8.615850e-47 |
| Msa1124880 | Msa1356730 | -0.846953 | 1.571006e-59 | -8.615850e-47 |
| Msa1124880 | Msa1368660 | -0.833019 | 6.782845e-56 | -8.615850e-47 |
| Msa1124880 | Msa1369180 | -0.803859 | 2.850585e-49 | -8.615850e-47 |
| Msa1124880 | Msa1376010 | -0.803645 | 3.158667e-49 | -8.615850e-47 |
| Msa1124880 | Msa1382750 | -0.801358 | 9.348183e-49 | -8.615850e-47 |
| Msa1124880 | Msa1384620 | -0.886199 | 4.208788e-72 | -8.615850e-47 |
| Msa1124880 | Msa1388270 | -0.811131 | 8.163243e-51 | -8.615850e-47 |
| Msa1124880 | Msa1395580 | -0.803215 | 3.877328e-49 | -8.615850e-47 |
| Msa1124880 | Msa1431240 | -0.823874 | 1.094733e-53 | -8.615850e-47 |
| Msa1124880 | Msa1435690 | -0.802601 | 5.192437e-49 | -8.615850e-47 |
| Msa1124880 | Msa1436660 | -0.804101 | 2.538505e-49 | -8.615850e-47 |
| Msa1124880 | Msa1446220 | -0.800726 | 1.258832e-48 | -8.615850e-47 |
| Msa1124880 | Msa1451780 | -0.832969 | 6.976594e-56 | -8.615850e-47 |
| Msa1124880 | Msa1456620 | -0.806855 | 6.717330e-50 | -8.615850e-47 |
| Msa1124880 | Msa1459630 | -0.821589 | 3.726388e-53 | -8.615850e-47 |
| Msa1124880 | Msa1460530 | -0.809714 | 1.650979e-50 | -8.615850e-47 |
| Msa1124880 | Msa1462600 | -0.815944 | 7.131634e-52 | -8.615850e-47 |
| Msa1124880 | Msa1465380 | -0.801422 | 9.072324e-49 | -8.615850e-47 |
| Msa0518480 | Msa1124880 | -0.817913 | 2.577022e-52 | -8.615850e-47 |
| Msa0518570 | Msa1124880 | 0.802568 | 5.275580e-49 | -8.615850e-47 |
| Msa0520810 | Msa1124880 | -0.814224 | 1.718034e-51 | -8.615850e-47 |
| Msa0521820 | Msa1124880 | 0.804571 | 2.026215e-49 | -8.615850e-47 |
| Msa0555510 | Msa1124880 | -0.823202 | 1.572180e-53 | -8.615850e-47 |
| Msa0560370 | Msa1124880 | -0.804038 | 2.616576e-49 | -8.615850e-47 |
| Msa0570680 | Msa1124880 | -0.808645 | 2.797542e-50 | -8.615850e-47 |
| Msa0579170 | Msa1124880 | -0.815115 | 1.090352e-51 | -8.615850e-47 |
| Msa0579230 | Msa1124880 | -0.816784 | 4.625197e-52 | -8.615850e-47 |
| Msa0864730 | Msa1124880 | -0.886032 | 4.866993e-72 | -8.615850e-47 |
| Msa0864750 | Msa1124880 | -0.886396 | 3.548251e-72 | -8.615850e-47 |
| Msa0887100 | Msa1124880 | -0.811002 | 8.704485e-51 | -8.615850e-47 |
| Msa0899730 | Msa1124880 | -0.809168 | 2.161663e-50 | -8.615850e-47 |
| Msa0909720 | Msa1124880 | -0.807490 | 4.926935e-50 | -8.615850e-47 |
| Msa0912110 | Msa1124880 | -0.802204 | 6.269665e-49 | -8.615850e-47 |
| Msa0927890 | Msa1124880 | -0.803442 | 3.479304e-49 | -8.615850e-47 |
| Msa0938370 | Msa1124880 | -0.816319 | 5.879132e-52 | -8.615850e-47 |
| Msa0950470 | Msa1124880 | -0.804339 | 2.264965e-49 | -8.615850e-47 |
| Msa0950570 | Msa1124880 | -0.807197 | 5.685038e-50 | -8.615850e-47 |
| Msa0967260 | Msa1124880 | -0.801295 | 9.630623e-49 | -8.615850e-47 |
| Msa0968960 | Msa1124880 | -0.860174 | 2.483094e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124880 | MtrunA17_Chr7g0265551 | 97.973 | 296 | 6 | 0 | 1 | 296 | 73 | 368 | 0.0 | 609 |
| Msa1124880 | MtrunA17_Chr5g0397981 | 54.983 | 291 | 116 | 4 | 1 | 290 | 19 | 295 | 2.06e-112 | 327 |
| Msa1124880 | MtrunA17_Chr4g0057281 | 57.509 | 273 | 104 | 2 | 19 | 290 | 19 | 280 | 9.36e-110 | 319 |
| Msa1124880 | MtrunA17_Chr1g0203751 | 53.020 | 298 | 120 | 2 | 1 | 289 | 1 | 287 | 2.25e-109 | 318 |
| Msa1124880 | MtrunA17_Chr8g0350401 | 54.110 | 292 | 115 | 3 | 1 | 284 | 1 | 281 | 3.93e-108 | 315 |
| Msa1124880 | MtrunA17_Chr6g0472801 | 47.603 | 292 | 139 | 2 | 1 | 289 | 1 | 281 | 2.26e-98 | 290 |
| Msa1124880 | MtrunA17_Chr7g0272101 | 31.250 | 272 | 158 | 8 | 22 | 283 | 4 | 256 | 1.45e-33 | 123 |
| Msa1124880 | MtrunA17_Chr4g0010881 | 30.712 | 267 | 154 | 7 | 22 | 287 | 4 | 240 | 2.64e-32 | 119 |
| Msa1124880 | MtrunA17_Chr1g0189721 | 26.354 | 277 | 176 | 6 | 19 | 283 | 4 | 264 | 2.03e-30 | 115 |
| Msa1124880 | MtrunA17_Chr1g0203281 | 26.241 | 282 | 173 | 6 | 21 | 283 | 6 | 271 | 5.88e-29 | 111 |
| Msa1124880 | MtrunA17_Chr1g0189671 | 26.481 | 287 | 176 | 6 | 18 | 285 | 3 | 273 | 1.24e-28 | 110 |
| Msa1124880 | MtrunA17_Chr1g0192371 | 25.862 | 290 | 175 | 8 | 18 | 283 | 7 | 280 | 2.83e-27 | 107 |
| Msa1124880 | MtrunA17_Chr1g0189611 | 25.818 | 275 | 176 | 7 | 21 | 283 | 6 | 264 | 3.95e-27 | 106 |
| Msa1124880 | MtrunA17_Chr1g0189621 | 26.715 | 277 | 170 | 11 | 21 | 283 | 6 | 263 | 1.81e-26 | 104 |
| Msa1124880 | MtrunA17_Chr1g0189821 | 24.727 | 275 | 184 | 6 | 21 | 285 | 6 | 267 | 3.32e-26 | 104 |
| Msa1124880 | MtrunA17_Chr1g0189591 | 37.762 | 143 | 86 | 2 | 21 | 160 | 15 | 157 | 7.57e-26 | 104 |
| Msa1124880 | MtrunA17_Chr1g0189751 | 26.715 | 277 | 175 | 7 | 19 | 283 | 4 | 264 | 1.54e-25 | 103 |
| Msa1124880 | MtrunA17_Chr7g0272091 | 24.742 | 291 | 180 | 7 | 18 | 283 | 6 | 282 | 6.80e-25 | 101 |
| Msa1124880 | MtrunA17_Chr1g0189641 | 24.823 | 282 | 178 | 6 | 21 | 283 | 6 | 272 | 5.28e-24 | 98.6 |
| Msa1124880 | MtrunA17_Chr1g0203331 | 26.971 | 241 | 140 | 5 | 35 | 253 | 5 | 231 | 1.27e-23 | 96.7 |
| Msa1124880 | MtrunA17_Chr3g0097191 | 25.182 | 274 | 179 | 5 | 19 | 283 | 10 | 266 | 3.70e-22 | 93.2 |
| Msa1124880 | MtrunA17_Chr1g0190071 | 24.490 | 294 | 176 | 8 | 21 | 285 | 6 | 282 | 3.69e-21 | 90.9 |
| Msa1124880 | MtrunA17_Chr1g0189771 | 32.414 | 145 | 95 | 2 | 22 | 163 | 15 | 159 | 6.88e-21 | 87.8 |
| Msa1124880 | MtrunA17_Chr1g0189781 | 31.757 | 148 | 92 | 3 | 22 | 163 | 11 | 155 | 1.46e-19 | 86.3 |
| Msa1124880 | MtrunA17_Chr3g0095261 | 24.286 | 280 | 190 | 7 | 19 | 283 | 10 | 282 | 1.64e-17 | 80.9 |
| Msa1124880 | MtrunA17_Chr7g0260801 | 25.177 | 282 | 175 | 8 | 21 | 290 | 18 | 275 | 1.03e-16 | 78.6 |
| Msa1124880 | MtrunA17_Chr1g0189661 | 25.965 | 285 | 180 | 8 | 21 | 285 | 6 | 279 | 3.43e-16 | 77.4 |
| Msa1124880 | MtrunA17_Chr1g0189711 | 24.514 | 257 | 158 | 8 | 18 | 253 | 3 | 244 | 6.46e-14 | 70.5 |
| Msa1124880 | MtrunA17_Chr3g0078331 | 22.222 | 216 | 142 | 5 | 21 | 223 | 19 | 221 | 9.60e-13 | 67.4 |
| Msa1124880 | MtrunA17_Chr1g0189541 | 26.667 | 180 | 101 | 6 | 115 | 283 | 24 | 183 | 7.84e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124880 | AT3G53000.1 | 69.565 | 299 | 87 | 3 | 1 | 296 | 1 | 298 | 1.57e-155 | 436 |
| Msa1124880 | AT3G61060.1 | 56.554 | 267 | 106 | 1 | 19 | 285 | 25 | 281 | 4.04e-110 | 321 |
| Msa1124880 | AT3G61060.2 | 56.716 | 268 | 105 | 2 | 19 | 285 | 25 | 282 | 5.99e-109 | 318 |
| Msa1124880 | AT1G12710.1 | 52.805 | 303 | 113 | 5 | 1 | 289 | 1 | 287 | 8.69e-107 | 312 |
| Msa1124880 | AT1G12710.2 | 46.377 | 345 | 113 | 6 | 1 | 289 | 1 | 329 | 2.54e-98 | 292 |
| Msa1124880 | AT1G63090.1 | 51.916 | 287 | 125 | 3 | 4 | 289 | 11 | 285 | 5.10e-98 | 290 |
| Msa1124880 | AT5G52120.1 | 45.791 | 297 | 135 | 3 | 8 | 289 | 1 | 286 | 1.23e-90 | 271 |
| Msa1124880 | AT2G02360.1 | 26.667 | 270 | 176 | 7 | 23 | 286 | 18 | 271 | 1.07e-27 | 108 |
| Msa1124880 | AT2G02340.1 | 27.425 | 299 | 178 | 10 | 9 | 287 | 26 | 305 | 4.75e-27 | 107 |
| Msa1124880 | AT2G02240.1 | 26.599 | 297 | 180 | 9 | 5 | 285 | 44 | 318 | 2.36e-26 | 106 |
| Msa1124880 | AT2G02230.1 | 36.424 | 151 | 88 | 3 | 14 | 162 | 27 | 171 | 7.69e-26 | 105 |
| Msa1124880 | AT1G09155.1 | 26.510 | 298 | 178 | 10 | 22 | 291 | 3 | 287 | 7.49e-25 | 101 |
| Msa1124880 | AT1G80110.1 | 23.810 | 273 | 182 | 5 | 19 | 283 | 1 | 255 | 2.10e-23 | 96.7 |
| Msa1124880 | AT2G02250.1 | 34.395 | 157 | 96 | 4 | 10 | 163 | 36 | 188 | 4.36e-23 | 97.1 |
| Msa1124880 | AT5G24560.1 | 32.143 | 140 | 91 | 1 | 21 | 160 | 5 | 140 | 3.10e-22 | 92.0 |
| Msa1124880 | AT2G02350.2 | 30.464 | 151 | 100 | 3 | 10 | 159 | 15 | 161 | 5.22e-22 | 94.0 |
| Msa1124880 | AT2G02310.1 | 25.714 | 280 | 176 | 9 | 21 | 287 | 47 | 307 | 4.56e-21 | 91.3 |
| Msa1124880 | AT1G56240.1 | 24.830 | 294 | 180 | 7 | 22 | 287 | 4 | 284 | 2.76e-20 | 89.0 |
| Msa1124880 | AT1G56250.1 | 24.828 | 290 | 177 | 7 | 22 | 283 | 4 | 280 | 9.89e-20 | 87.4 |
| Msa1124880 | AT2G02320.1 | 24.579 | 297 | 188 | 10 | 4 | 285 | 25 | 300 | 5.98e-19 | 85.5 |
| Msa1124880 | AT2G02300.1 | 33.117 | 154 | 96 | 4 | 11 | 163 | 28 | 175 | 4.53e-17 | 80.1 |
| Msa1124880 | AT4G19840.1 | 30.603 | 232 | 124 | 11 | 62 | 285 | 44 | 246 | 1.23e-12 | 66.6 |
Find 101 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTTGTTAAGGTAATTT+AGG | 0.156078 | 7_3:-76115927 | Msa1124880:three_prime_UTR |
| ACTCGCTCGCGTGCGTGTTA+TGG | 0.238373 | 7_3:-76118729 | Msa1124880:exon |
| TAGTTGTCGTTGAAATAATT+TGG | 0.246489 | 7_3:+76118808 | None:intergenic |
| GCGAAAGGTTTGTCTATTAC+TGG | 0.248170 | 7_3:-76118264 | Msa1124880:CDS |
| TCAACGTTCTTCTCTTACTA+TGG | 0.253730 | 7_3:-76118768 | Msa1124880:five_prime_UTR |
| CTGCTTCCGCTGATTCCGTT+TGG | 0.279164 | 7_3:-76118556 | Msa1124880:CDS |
| TGCTTCCGCTGATTCCGTTT+GGG | 0.281862 | 7_3:-76118555 | Msa1124880:CDS |
| AAGATCCCAACAAAGTATTC+TGG | 0.282202 | 7_3:+76115959 | None:intergenic |
| CTAACTATCAACATCTTCTA+AGG | 0.282361 | 7_3:-76118517 | Msa1124880:CDS |
| TTCCGACAGCGTAGTTCTTC+GGG | 0.292375 | 7_3:+76118488 | None:intergenic |
| TAGCATATTTGCAGCAAATA+TGG | 0.292809 | 7_3:-76116470 | Msa1124880:CDS |
| ACCTTTGTTAAGGTAATTTA+GGG | 0.302284 | 7_3:-76115926 | Msa1124880:three_prime_UTR |
| TTGTGGCTTGATAGGGTTAC+TGG | 0.305604 | 7_3:-76118309 | Msa1124880:CDS |
| ATAATTATACTCTCTCCTTT+AGG | 0.320102 | 7_3:-76116404 | Msa1124880:CDS |
| GGTGCTTCGTTGTCGAATCT+TGG | 0.327372 | 7_3:-76118707 | Msa1124880:CDS |
| ATTCCGACAGCGTAGTTCTT+CGG | 0.334823 | 7_3:+76118487 | None:intergenic |
| TACGCGCCGACCGAGTCTTT+TGG | 0.340105 | 7_3:+76116362 | None:intergenic |
| TCATTTCCCTGCTGTTCTAT+AGG | 0.348895 | 7_3:-76115836 | Msa1124880:three_prime_UTR |
| TAGGGTTTGCATGTCAATTT+CGG | 0.355678 | 7_3:-76118286 | Msa1124880:CDS |
| GCAATCATAAGCGTGGATAT+TGG | 0.361605 | 7_3:-76116215 | Msa1124880:CDS |
| CAATCATAAGCGTGGATATT+GGG | 0.364455 | 7_3:-76116214 | Msa1124880:CDS |
| TGCAGCAATTGTGGCTTGAT+AGG | 0.373892 | 7_3:-76118317 | Msa1124880:intron |
| ACCGTTTGATGATGGTAATA+AGG | 0.383826 | 7_3:-76118423 | Msa1124880:intron |
| TGTACAGTCAATCTGTTTCA+TGG | 0.389000 | 7_3:+76116128 | None:intergenic |
| TTTGATCCCAACCATGGGTC+TGG | 0.400313 | 7_3:+76116328 | None:intergenic |
| GAATTGATGATCGGAGATAC+TGG | 0.406343 | 7_3:-76118242 | Msa1124880:CDS |
| AGAAGATGTTGATAGTTAGA+AGG | 0.406652 | 7_3:+76118521 | None:intergenic |
| GAAATGATCAGGCATAGAAT+AGG | 0.410426 | 7_3:-76116025 | Msa1124880:exon |
| TTACACAGCTACCTTTGTTA+AGG | 0.413923 | 7_3:-76115936 | Msa1124880:three_prime_UTR |
| AATATCCCAGAATACTTTGT+TGG | 0.417409 | 7_3:-76115965 | Msa1124880:three_prime_UTR |
| TCAGGGATGTCGCCGAGACT+TGG | 0.421026 | 7_3:+76118662 | None:intergenic |
| GGGTTCCTACTGAAGAATCT+AGG | 0.427818 | 7_3:-76118215 | Msa1124880:intron |
| GCTTGATAGGGTTACTGGTA+GGG | 0.443412 | 7_3:-76118304 | Msa1124880:CDS |
| GGCTTGATAGGGTTACTGGT+AGG | 0.446268 | 7_3:-76118305 | Msa1124880:CDS |
| GTGGTGTGGGAACATGTTAT+TGG | 0.449768 | 7_3:+76118872 | None:intergenic |
| AGATCCCAACAAAGTATTCT+GGG | 0.449929 | 7_3:+76115960 | None:intergenic |
| GTATAATTATCAGCAGGAAA+TGG | 0.451382 | 7_3:+76116417 | None:intergenic |
| GCGAGCTAAGTTACAAATCT+CGG | 0.453621 | 7_3:+76118601 | None:intergenic |
| ATATCCCAGAATACTTTGTT+GGG | 0.456744 | 7_3:-76115964 | Msa1124880:three_prime_UTR |
| AAATGATCAGGCATAGAATA+GGG | 0.457559 | 7_3:-76116024 | Msa1124880:exon |
| GCTGTCAACTTCAGATGGTC+AGG | 0.460205 | 7_3:-76116289 | Msa1124880:CDS |
| ATGATCGGAGATACTGGACT+TGG | 0.466267 | 7_3:-76118236 | Msa1124880:CDS |
| AAAGCTGAGTTGGTATGATT+TGG | 0.475575 | 7_3:+76118848 | None:intergenic |
| CTCTCCTTTAGGCTTCACCT+TGG | 0.478658 | 7_3:-76116393 | Msa1124880:CDS |
| TGGTATGATTTGGTGTGGTG+TGG | 0.482664 | 7_3:+76118858 | None:intergenic |
| GTGGGTGAGTTTATTGTGAC+TGG | 0.484846 | 7_3:-76116180 | Msa1124880:CDS |
| AGCATCATCTGAGTGCTGCT+TGG | 0.485935 | 7_3:-76116265 | Msa1124880:CDS |
| GCAGCAATTGTGGCTTGATA+GGG | 0.487718 | 7_3:-76118316 | Msa1124880:intron |
| TGACAAACCTATAGAACAGC+AGG | 0.491660 | 7_3:+76115829 | None:intergenic |
| GTTGACAGCTTAAATATGAC+TGG | 0.492659 | 7_3:+76116303 | None:intergenic |
| TTACCATCATCAAACGGTAA+AGG | 0.493520 | 7_3:+76118428 | None:intergenic |
| TGGAGCGATGGTTGAACCGT+TGG | 0.500130 | 7_3:+76118682 | None:intergenic |
| TGCATGTCAATTTCGGCGAA+AGG | 0.505228 | 7_3:-76118279 | Msa1124880:CDS |
| TAAGGTAATTTAGGGTGTGA+TGG | 0.505382 | 7_3:-76115918 | Msa1124880:three_prime_UTR |
| AAACCTTTACCGTTTGATGA+TGG | 0.507236 | 7_3:-76118431 | Msa1124880:CDS |
| GGTATGATTTGGTGTGGTGT+GGG | 0.511687 | 7_3:+76118859 | None:intergenic |
| CGAGCTAAGTTACAAATCTC+GGG | 0.515282 | 7_3:+76118602 | None:intergenic |
| TCAACCATCGCTCCAAGTCT+CGG | 0.520611 | 7_3:-76118674 | Msa1124880:CDS |
| ATTGACTGTACACATTCAAA+AGG | 0.523702 | 7_3:-76116117 | Msa1124880:CDS |
| TTGAGAGACCGCAAGGGAGG+CGG | 0.525474 | 7_3:-76116054 | Msa1124880:CDS |
| ATATGGTGGTTTGAAGTGGA+TGG | 0.529067 | 7_3:-76116453 | Msa1124880:CDS |
| CTATGACCAGACCCATGGTT+GGG | 0.529358 | 7_3:-76116334 | Msa1124880:CDS |
| TATGGTGGTTTGAAGTGGAT+GGG | 0.530496 | 7_3:-76116452 | Msa1124880:CDS |
| GAGAGAGTATAATTATCAGC+AGG | 0.530526 | 7_3:+76116411 | None:intergenic |
| ATGTAAATGTAAAGCTGAGT+TGG | 0.530610 | 7_3:+76118838 | None:intergenic |
| TCGTCCAAGGTGAAGCCTAA+AGG | 0.536499 | 7_3:+76116389 | None:intergenic |
| TTGCGGTCTCTCAACTCGCT+AGG | 0.541840 | 7_3:+76116063 | None:intergenic |
| ACCTTATTACCATCATCAAA+CGG | 0.548291 | 7_3:+76118422 | None:intergenic |
| GTTATTGGCGTCAACATCAA+AGG | 0.548839 | 7_3:+76118887 | None:intergenic |
| TTGTCGAATCTTGGATCCAA+CGG | 0.552308 | 7_3:-76118698 | Msa1124880:CDS |
| TTTAAGCTGTCAACTTCAGA+TGG | 0.554061 | 7_3:-76116294 | Msa1124880:CDS |
| CTATTACTGGAATTGATGAT+CGG | 0.557562 | 7_3:-76118251 | Msa1124880:CDS |
| TTGTCGTTGAAATAATTTGG+TGG | 0.561692 | 7_3:+76118811 | None:intergenic |
| TGGATATTGGGTAGATTACA+AGG | 0.565259 | 7_3:-76116202 | Msa1124880:CDS |
| CATATTTGCAGCAAATATGG+TGG | 0.572697 | 7_3:-76116467 | Msa1124880:CDS |
| GCAAATATGGTGGTTTGAAG+TGG | 0.575682 | 7_3:-76116457 | Msa1124880:CDS |
| TATTGGGTAGATTACAAGGT+GGG | 0.580797 | 7_3:-76116198 | Msa1124880:CDS |
| TAGCGAGTTGAGAGACCGCA+AGG | 0.584165 | 7_3:-76116061 | Msa1124880:CDS |
| ATGGTGGTTTGAAGTGGATG+GGG | 0.588532 | 7_3:-76116451 | Msa1124880:CDS |
| GTCGCCGAGACTTGGAGCGA+TGG | 0.591097 | 7_3:+76118670 | None:intergenic |
| TGTAACCTAGATTCTTCAGT+AGG | 0.600640 | 7_3:+76118210 | None:intergenic |
| AGGTAACTTAGATTCCCAAA+CGG | 0.601089 | 7_3:+76118541 | None:intergenic |
| TGCAGCTATGACCAGACCCA+TGG | 0.603310 | 7_3:-76116339 | Msa1124880:CDS |
| GCTATGACCAGACCCATGGT+TGG | 0.608469 | 7_3:-76116335 | Msa1124880:CDS |
| ACTGTCCACGATGATACATA+CGG | 0.613314 | 7_3:-76116237 | Msa1124880:CDS |
| GAGTTGAGAGACCGCAAGGG+AGG | 0.616169 | 7_3:-76116057 | Msa1124880:CDS |
| TGAGTTGGTATGATTTGGTG+TGG | 0.618701 | 7_3:+76118853 | None:intergenic |
| ACCCTAAATTACCTTAACAA+AGG | 0.629176 | 7_3:+76115925 | None:intergenic |
| GTGGTTTGAAGTGGATGGGG+AGG | 0.629340 | 7_3:-76116448 | Msa1124880:CDS |
| TGCCCGAAGAACTACGCTGT+CGG | 0.632314 | 7_3:-76118490 | Msa1124880:CDS |
| GACTGTACACATTCAAAAGG+TGG | 0.636157 | 7_3:-76116114 | Msa1124880:CDS |
| TGATCGGAGATACTGGACTT+GGG | 0.644140 | 7_3:-76118235 | Msa1124880:CDS |
| AGCGAGTTGAGAGACCGCAA+GGG | 0.651355 | 7_3:-76116060 | Msa1124880:CDS |
| AGATTCCCAAACGGAATCAG+CGG | 0.656920 | 7_3:+76118550 | None:intergenic |
| ACATACGGCAATCATAAGCG+TGG | 0.659891 | 7_3:-76116222 | Msa1124880:CDS |
| GACAAACCTATAGAACAGCA+GGG | 0.676920 | 7_3:+76115830 | None:intergenic |
| GATTGCCGTATGTATCATCG+TGG | 0.696598 | 7_3:+76116232 | None:intergenic |
| GCTAAGTTACAAATCTCGGG+AGG | 0.700399 | 7_3:+76118605 | None:intergenic |
| TAAATACAGAATCTACACAA+AGG | 0.700993 | 7_3:+76116091 | None:intergenic |
| TGGGATATTTGACATCACCA+AGG | 0.706573 | 7_3:+76115979 | None:intergenic |
| ATATTGGGTAGATTACAAGG+TGG | 0.766319 | 7_3:-76116199 | Msa1124880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTACCT+TGG | - | chr7_3:76118691-76118710 | Msa1124880:CDS | 10.0% |
| !! | TGTAATTAAAAACAAGTATT+GGG | + | chr7_3:76116599-76116618 | None:intergenic | 15.0% |
| !! | TTGTAATTAAAAACAAGTAT+TGG | + | chr7_3:76116600-76116619 | None:intergenic | 15.0% |
| !! | TTTCATAAGTTAAATTAAGA+TGG | - | chr7_3:76116738-76116757 | Msa1124880:intron | 15.0% |
| !! | AATTAAGATGGAAATATTAT+TGG | - | chr7_3:76116750-76116769 | Msa1124880:intron | 15.0% |
| !!! | AAAAAATATGTTGACTTTTA+AGG | - | chr7_3:76117175-76117194 | Msa1124880:intron | 15.0% |
| !!! | TTGTAAACTTAATTTTCAAT+GGG | - | chr7_3:76117373-76117392 | Msa1124880:intron | 15.0% |
| !! | GTTTATTGTTTCAAATCATT+CGG | - | chr7_3:76116316-76116335 | Msa1124880:CDS | 20.0% |
| !!! | TTTTTATTGATGATGGAATT+AGG | - | chr7_3:76116343-76116362 | Msa1124880:CDS | 20.0% |
| !! | ATTACAAGACTTGAAATATT+TGG | + | chr7_3:76116891-76116910 | None:intergenic | 20.0% |
| !!! | TTAAATTCTTTTAATCCAAG+AGG | - | chr7_3:76117048-76117067 | Msa1124880:intron | 20.0% |
| !!! | GTTGTAAACTTAATTTTCAA+TGG | - | chr7_3:76117372-76117391 | Msa1124880:intron | 20.0% |
| !! | AATTCAATTGAACTGTTAAT+TGG | - | chr7_3:76117461-76117480 | Msa1124880:intron | 20.0% |
| !! | ATTCAATTGAACTGTTAATT+GGG | - | chr7_3:76117462-76117481 | Msa1124880:intron | 20.0% |
| !! | TTAATAAAACATCAACATGT+AGG | - | chr7_3:76117976-76117995 | Msa1124880:intron | 20.0% |
| !! | TTTCTATTATCATTCATTTC+AGG | - | chr7_3:76118184-76118203 | Msa1124880:intron | 20.0% |
| ! | TAGTTGTCGTTGAAATAATT+TGG | + | chr7_3:76115882-76115901 | None:intergenic | 25.0% |
| !!! | CGGTTTATTTTTATTGATGA+TGG | - | chr7_3:76116336-76116355 | Msa1124880:CDS | 25.0% |
| !!! | CTTTTTCTCACATTTAAAGT+TGG | - | chr7_3:76116558-76116577 | Msa1124880:intron | 25.0% |
| !!! | TAATTTTTGAGAGCATGTTT+GGG | - | chr7_3:76116623-76116642 | Msa1124880:intron | 25.0% |
| ! | AGTTTATTTACAGTTTAGCT+AGG | + | chr7_3:76116847-76116866 | None:intergenic | 25.0% |
| ! | ACTTGAAATATTTGGATCTT+AGG | + | chr7_3:76116883-76116902 | None:intergenic | 25.0% |
| !!! | ATTTTGAGAAAAGTGGAAAT+TGG | - | chr7_3:76117010-76117029 | Msa1124880:intron | 25.0% |
| ! | TGGAAATTGGATTATTACTT+TGG | - | chr7_3:76117023-76117042 | Msa1124880:intron | 25.0% |
| ! | ACTCTTGAATATAGTCTTTA+TGG | - | chr7_3:76117098-76117117 | Msa1124880:intron | 25.0% |
| ! | TTGAATATAGTCTTTATGGT+TGG | - | chr7_3:76117102-76117121 | Msa1124880:intron | 25.0% |
| ! | GATAGACAAATTATTGTAAG+AGG | - | chr7_3:76117846-76117865 | Msa1124880:intron | 25.0% |
| !!! | ATTGGAATAGTTTTACGAAT+GGG | + | chr7_3:76118051-76118070 | None:intergenic | 25.0% |
| ! | ATAATTATACTCTCTCCTTT+AGG | - | chr7_3:76118283-76118302 | Msa1124880:CDS | 25.0% |
| ! | TAAATACAGAATCTACACAA+AGG | + | chr7_3:76118599-76118618 | None:intergenic | 25.0% |
| ! | TACCTTTGTTAAGGTAATTT+AGG | - | chr7_3:76118760-76118779 | Msa1124880:five_prime_UTR | 25.0% |
| ! | ACCTTTGTTAAGGTAATTTA+GGG | - | chr7_3:76118761-76118780 | Msa1124880:five_prime_UTR | 25.0% |
| ATGTAAATGTAAAGCTGAGT+TGG | + | chr7_3:76115852-76115871 | None:intergenic | 30.0% | |
| TTGTCGTTGAAATAATTTGG+TGG | + | chr7_3:76115879-76115898 | None:intergenic | 30.0% | |
| !! | AGAAGATGTTGATAGTTAGA+AGG | + | chr7_3:76116169-76116188 | None:intergenic | 30.0% |
| CTAACTATCAACATCTTCTA+AGG | - | chr7_3:76116170-76116189 | Msa1124880:CDS | 30.0% | |
| ACCTTATTACCATCATCAAA+CGG | + | chr7_3:76116268-76116287 | None:intergenic | 30.0% | |
| !! | TTTGATGATGGTAATAAGGT+AGG | - | chr7_3:76116268-76116287 | Msa1124880:CDS | 30.0% |
| !! | TTGATGATGGTAATAAGGTA+GGG | - | chr7_3:76116269-76116288 | Msa1124880:CDS | 30.0% |
| ! | CTATTACTGGAATTGATGAT+CGG | - | chr7_3:76116436-76116455 | Msa1124880:CDS | 30.0% |
| !! | GTAATTTTTGAGAGCATGTT+TGG | - | chr7_3:76116622-76116641 | Msa1124880:intron | 30.0% |
| !! | GCTTGTAATTTTGAGAAAAG+TGG | - | chr7_3:76117003-76117022 | Msa1124880:intron | 30.0% |
| CAACTCTTCTTGAAATTGAA+TGG | + | chr7_3:76117208-76117227 | None:intergenic | 30.0% | |
| ! | TATTTCTCTGGTTCAAACAT+AGG | - | chr7_3:76117249-76117268 | Msa1124880:intron | 30.0% |
| CAACAAAACACATAGAATCA+GGG | + | chr7_3:76117326-76117345 | None:intergenic | 30.0% | |
| ACAACAAAACACATAGAATC+AGG | + | chr7_3:76117327-76117346 | None:intergenic | 30.0% | |
| ATTATAATTGAGCCTCCTAA+AGG | - | chr7_3:76117639-76117658 | Msa1124880:intron | 30.0% | |
| ! | AACATCTTGTTATCAATGCT+AGG | - | chr7_3:76117705-76117724 | Msa1124880:intron | 30.0% |
| ! | ACATCTTGTTATCAATGCTA+GGG | - | chr7_3:76117706-76117725 | Msa1124880:intron | 30.0% |
| ATTAACCTGTGTTACACTAT+AGG | + | chr7_3:76117893-76117912 | None:intergenic | 30.0% | |
| ATTAACCTGTGTTACACTAT+AGG | + | chr7_3:76117893-76117912 | None:intergenic | 30.0% | |
| AAAACATCAACATGTAGGTT+TGG | - | chr7_3:76117981-76118000 | Msa1124880:intron | 30.0% | |
| !! | AATAGTTTTACGAATGGGAA+TGG | + | chr7_3:76118046-76118065 | None:intergenic | 30.0% |
| !! | GATTGGAATAGTTTTACGAA+TGG | + | chr7_3:76118052-76118071 | None:intergenic | 30.0% |
| ATAGCTTATAAGCAGTAGAT+TGG | + | chr7_3:76118069-76118088 | None:intergenic | 30.0% | |
| ! | CTTAATAGTGCTACTATTAC+TGG | + | chr7_3:76118104-76118123 | None:intergenic | 30.0% |
| TAGCATATTTGCAGCAAATA+TGG | - | chr7_3:76118217-76118236 | Msa1124880:CDS | 30.0% | |
| GTATAATTATCAGCAGGAAA+TGG | + | chr7_3:76118273-76118292 | None:intergenic | 30.0% | |
| !! | GAGAATCTAACTTTTGTTGT+AGG | + | chr7_3:76118540-76118559 | None:intergenic | 30.0% |
| ATTGACTGTACACATTCAAA+AGG | - | chr7_3:76118570-76118589 | Msa1124880:CDS | 30.0% | |
| AAATGATCAGGCATAGAATA+GGG | - | chr7_3:76118663-76118682 | Msa1124880:CDS | 30.0% | |
| AATATCCCAGAATACTTTGT+TGG | - | chr7_3:76118722-76118741 | Msa1124880:exon | 30.0% | |
| ATATCCCAGAATACTTTGTT+GGG | - | chr7_3:76118723-76118742 | Msa1124880:exon | 30.0% | |
| ACCCTAAATTACCTTAACAA+AGG | + | chr7_3:76118765-76118784 | None:intergenic | 30.0% | |
| !! | AAAGCTGAGTTGGTATGATT+TGG | + | chr7_3:76115842-76115861 | None:intergenic | 35.0% |
| TCAACGTTCTTCTCTTACTA+TGG | - | chr7_3:76115919-76115938 | Msa1124880:three_prime_UTR | 35.0% | |
| AGGTAACTTAGATTCCCAAA+CGG | + | chr7_3:76116149-76116168 | None:intergenic | 35.0% | |
| AAACCTTTACCGTTTGATGA+TGG | - | chr7_3:76116256-76116275 | Msa1124880:CDS | 35.0% | |
| TTACCATCATCAAACGGTAA+AGG | + | chr7_3:76116262-76116281 | None:intergenic | 35.0% | |
| !! | ACCGTTTGATGATGGTAATA+AGG | - | chr7_3:76116264-76116283 | Msa1124880:CDS | 35.0% |
| ! | TTAGGTTTTTGCAGCAATTG+TGG | - | chr7_3:76116361-76116380 | Msa1124880:CDS | 35.0% |
| TAGGGTTTGCATGTCAATTT+CGG | - | chr7_3:76116401-76116420 | Msa1124880:CDS | 35.0% | |
| TGTAACCTAGATTCTTCAGT+AGG | + | chr7_3:76116480-76116499 | None:intergenic | 35.0% | |
| TTTGGATCTTAGGATGCATT+AGG | + | chr7_3:76116873-76116892 | None:intergenic | 35.0% | |
| GGAATTGTTGAGACTATAAC+AGG | + | chr7_3:76116948-76116967 | None:intergenic | 35.0% | |
| TAGTCTCAACAATTCCTGAT+TGG | - | chr7_3:76116952-76116971 | Msa1124880:intron | 35.0% | |
| TTTAATCCAAGAGGATTGCT+AGG | - | chr7_3:76117057-76117076 | Msa1124880:intron | 35.0% | |
| CAATGGGAATGTTAAATTGC+TGG | - | chr7_3:76117389-76117408 | Msa1124880:intron | 35.0% | |
| GGCAGTGTAGTTTCTAATAT+TGG | + | chr7_3:76117574-76117593 | None:intergenic | 35.0% | |
| AAACTGCATCTATAGTGAGA+AGG | + | chr7_3:76117595-76117614 | None:intergenic | 35.0% | |
| CAGGTTAATCTCACAGAAAA+AGG | - | chr7_3:76117939-76117958 | Msa1124880:intron | 35.0% | |
| CTGCTTTGCGTAGTTTATTA+TGG | - | chr7_3:76118004-76118023 | Msa1124880:intron | 35.0% | |
| TACGAATGGGAATGGAAATT+TGG | + | chr7_3:76118038-76118057 | None:intergenic | 35.0% | |
| CATATTTGCAGCAAATATGG+TGG | - | chr7_3:76118220-76118239 | Msa1124880:CDS | 35.0% | |
| ! | GAGAGAGTATAATTATCAGC+AGG | + | chr7_3:76118279-76118298 | None:intergenic | 35.0% |
| GTTGACAGCTTAAATATGAC+TGG | + | chr7_3:76118387-76118406 | None:intergenic | 35.0% | |
| TTTAAGCTGTCAACTTCAGA+TGG | - | chr7_3:76118393-76118412 | Msa1124880:intron | 35.0% | |
| CAATCATAAGCGTGGATATT+GGG | - | chr7_3:76118473-76118492 | Msa1124880:CDS | 35.0% | |
| TGGATATTGGGTAGATTACA+AGG | - | chr7_3:76118485-76118504 | Msa1124880:CDS | 35.0% | |
| ATATTGGGTAGATTACAAGG+TGG | - | chr7_3:76118488-76118507 | Msa1124880:CDS | 35.0% | |
| TATTGGGTAGATTACAAGGT+GGG | - | chr7_3:76118489-76118508 | Msa1124880:CDS | 35.0% | |
| TGTACAGTCAATCTGTTTCA+TGG | + | chr7_3:76118562-76118581 | None:intergenic | 35.0% | |
| GAAATGATCAGGCATAGAAT+AGG | - | chr7_3:76118662-76118681 | Msa1124880:CDS | 35.0% | |
| ! | AGATCCCAACAAAGTATTCT+GGG | + | chr7_3:76118730-76118749 | None:intergenic | 35.0% |
| ! | AAGATCCCAACAAAGTATTC+TGG | + | chr7_3:76118731-76118750 | None:intergenic | 35.0% |
| TTACACAGCTACCTTTGTTA+AGG | - | chr7_3:76118751-76118770 | Msa1124880:five_prime_UTR | 35.0% | |
| ! | TAAGGTAATTTAGGGTGTGA+TGG | - | chr7_3:76118769-76118788 | Msa1124880:five_prime_UTR | 35.0% |
| GTTATTGGCGTCAACATCAA+AGG | + | chr7_3:76115803-76115822 | None:intergenic | 40.0% | |
| !! | TGAGTTGGTATGATTTGGTG+TGG | + | chr7_3:76115837-76115856 | None:intergenic | 40.0% |
| TTGTCGAATCTTGGATCCAA+CGG | - | chr7_3:76115989-76116008 | Msa1124880:three_prime_UTR | 40.0% | |
| CGAGCTAAGTTACAAATCTC+GGG | + | chr7_3:76116088-76116107 | None:intergenic | 40.0% | |
| GCGAGCTAAGTTACAAATCT+CGG | + | chr7_3:76116089-76116108 | None:intergenic | 40.0% | |
| GCGAAAGGTTTGTCTATTAC+TGG | - | chr7_3:76116423-76116442 | Msa1124880:CDS | 40.0% | |
| ! | GAATTGATGATCGGAGATAC+TGG | - | chr7_3:76116445-76116464 | Msa1124880:CDS | 40.0% |
| !! | CAATTCCTGATTGGTTTGCT+TGG | - | chr7_3:76116961-76116980 | Msa1124880:intron | 40.0% |
| ACAAACCAAGCAAACCAATC+AGG | + | chr7_3:76116969-76116988 | None:intergenic | 40.0% | |
| !! | GCGACTTGCTAATATTTCTC+TGG | - | chr7_3:76117237-76117256 | Msa1124880:intron | 40.0% |
| ! | TGCGACATTTTACTGATGAC+CGG | - | chr7_3:76117614-76117633 | Msa1124880:intron | 40.0% |
| GGAGGCTCAATTATAATTGC+CGG | + | chr7_3:76117636-76117655 | None:intergenic | 40.0% | |
| !!! | TTTGCGACTTTTGGTGTCAT+AGG | - | chr7_3:76117670-76117689 | Msa1124880:intron | 40.0% |
| CGAAGTTTAGCAGAACTTGT+TGG | - | chr7_3:76117801-76117820 | Msa1124880:intron | 40.0% | |
| TACAGCCTATAGTGTAACAC+AGG | - | chr7_3:76117920-76117939 | Msa1124880:intron | 40.0% | |
| GCAAATATGGTGGTTTGAAG+TGG | - | chr7_3:76118230-76118249 | Msa1124880:CDS | 40.0% | |
| ! | ATATGGTGGTTTGAAGTGGA+TGG | - | chr7_3:76118234-76118253 | Msa1124880:CDS | 40.0% |
| ! | TATGGTGGTTTGAAGTGGAT+GGG | - | chr7_3:76118235-76118254 | Msa1124880:CDS | 40.0% |
| !! | GTCTTTTGGAAAATCGTCCA+AGG | + | chr7_3:76118314-76118333 | None:intergenic | 40.0% |
| ! | GGACGATTTTCCAAAAGACT+CGG | - | chr7_3:76118315-76118334 | Msa1124880:CDS | 40.0% |
| !! | GATTTTCCAAAAGACTCGGT+CGG | - | chr7_3:76118319-76118338 | Msa1124880:intron | 40.0% |
| ACTGTCCACGATGATACATA+CGG | - | chr7_3:76118450-76118469 | Msa1124880:CDS | 40.0% | |
| GCAATCATAAGCGTGGATAT+TGG | - | chr7_3:76118472-76118491 | Msa1124880:CDS | 40.0% | |
| GACTGTACACATTCAAAAGG+TGG | - | chr7_3:76118573-76118592 | Msa1124880:CDS | 40.0% | |
| !!! | GGCGGTTTTTTGAAATGATC+AGG | - | chr7_3:76118651-76118670 | Msa1124880:CDS | 40.0% |
| TGGGATATTTGACATCACCA+AGG | + | chr7_3:76118711-76118730 | None:intergenic | 40.0% | |
| TCATTTCCCTGCTGTTCTAT+AGG | - | chr7_3:76118851-76118870 | Msa1124880:five_prime_UTR | 40.0% | |
| GACAAACCTATAGAACAGCA+GGG | + | chr7_3:76118860-76118879 | None:intergenic | 40.0% | |
| TGACAAACCTATAGAACAGC+AGG | + | chr7_3:76118861-76118880 | None:intergenic | 40.0% | |
| GTGGTGTGGGAACATGTTAT+TGG | + | chr7_3:76115818-76115837 | None:intergenic | 45.0% | |
| !! | GGTATGATTTGGTGTGGTGT+GGG | + | chr7_3:76115831-76115850 | None:intergenic | 45.0% |
| !! | TGGTATGATTTGGTGTGGTG+TGG | + | chr7_3:76115832-76115851 | None:intergenic | 45.0% |
| ! | CACGAGCAACACAGTTTTCA+GGG | + | chr7_3:76116045-76116064 | None:intergenic | 45.0% |
| ! | ACACGAGCAACACAGTTTTC+AGG | + | chr7_3:76116046-76116065 | None:intergenic | 45.0% |
| GCTAAGTTACAAATCTCGGG+AGG | + | chr7_3:76116085-76116104 | None:intergenic | 45.0% | |
| AGATTCCCAAACGGAATCAG+CGG | + | chr7_3:76116140-76116159 | None:intergenic | 45.0% | |
| ATTCCGACAGCGTAGTTCTT+CGG | + | chr7_3:76116203-76116222 | None:intergenic | 45.0% | |
| TGCAGCAATTGTGGCTTGAT+AGG | - | chr7_3:76116370-76116389 | Msa1124880:CDS | 45.0% | |
| GCAGCAATTGTGGCTTGATA+GGG | - | chr7_3:76116371-76116390 | Msa1124880:CDS | 45.0% | |
| TTGTGGCTTGATAGGGTTAC+TGG | - | chr7_3:76116378-76116397 | Msa1124880:CDS | 45.0% | |
| GCTTGATAGGGTTACTGGTA+GGG | - | chr7_3:76116383-76116402 | Msa1124880:CDS | 45.0% | |
| TGCATGTCAATTTCGGCGAA+AGG | - | chr7_3:76116408-76116427 | Msa1124880:CDS | 45.0% | |
| ATGATCGGAGATACTGGACT+TGG | - | chr7_3:76116451-76116470 | Msa1124880:CDS | 45.0% | |
| TGATCGGAGATACTGGACTT+GGG | - | chr7_3:76116452-76116471 | Msa1124880:CDS | 45.0% | |
| GGGTTCCTACTGAAGAATCT+AGG | - | chr7_3:76116472-76116491 | Msa1124880:CDS | 45.0% | |
| ! | TTGAGAGCATGTTTGGGCTT+TGG | - | chr7_3:76116629-76116648 | Msa1124880:intron | 45.0% |
| TGTGTTCCTAGCAATCCTCT+TGG | + | chr7_3:76117066-76117085 | None:intergenic | 45.0% | |
| !! | CAAAGAGAAGCACCTTTAGG+AGG | + | chr7_3:76117654-76117673 | None:intergenic | 45.0% |
| !! | TCGCAAAGAGAAGCACCTTT+AGG | + | chr7_3:76117657-76117676 | None:intergenic | 45.0% |
| ! | GTGCTTCTCTTTGCGACTTT+TGG | - | chr7_3:76117661-76117680 | Msa1124880:intron | 45.0% |
| TGCAGCCTATAGTGTAACAC+AGG | - | chr7_3:76117885-76117904 | Msa1124880:intron | 45.0% | |
| ! | ATGGTGGTTTGAAGTGGATG+GGG | - | chr7_3:76118236-76118255 | Msa1124880:CDS | 45.0% |
| ! | TGGCTTTTGATCCCAACCAT+GGG | + | chr7_3:76118367-76118386 | None:intergenic | 45.0% |
| GATTGCCGTATGTATCATCG+TGG | + | chr7_3:76118458-76118477 | None:intergenic | 45.0% | |
| ACATACGGCAATCATAAGCG+TGG | - | chr7_3:76118465-76118484 | Msa1124880:CDS | 45.0% | |
| GTGGGTGAGTTTATTGTGAC+TGG | - | chr7_3:76118507-76118526 | Msa1124880:CDS | 45.0% | |
| GGTGCTTCGTTGTCGAATCT+TGG | - | chr7_3:76115980-76115999 | Msa1124880:three_prime_UTR | 50.0% | |
| TCAACCATCGCTCCAAGTCT+CGG | - | chr7_3:76116013-76116032 | Msa1124880:three_prime_UTR | 50.0% | |
| ! | CGCTTAAATCGCGCTTTTCG+CGG | - | chr7_3:76116106-76116125 | Msa1124880:CDS | 50.0% |
| !! | TGCTTCCGCTGATTCCGTTT+GGG | - | chr7_3:76116132-76116151 | Msa1124880:CDS | 50.0% |
| TTCCGACAGCGTAGTTCTTC+GGG | + | chr7_3:76116202-76116221 | None:intergenic | 50.0% | |
| GGCTTGATAGGGTTACTGGT+AGG | - | chr7_3:76116382-76116401 | Msa1124880:CDS | 50.0% | |
| CGAGAACTCGTGAAGACTTC+AGG | + | chr7_3:76117783-76117802 | None:intergenic | 50.0% | |
| CTCTCCTTTAGGCTTCACCT+TGG | - | chr7_3:76118294-76118313 | Msa1124880:CDS | 50.0% | |
| TCGTCCAAGGTGAAGCCTAA+AGG | + | chr7_3:76118301-76118320 | None:intergenic | 50.0% | |
| CTATGACCAGACCCATGGTT+GGG | - | chr7_3:76118353-76118372 | Msa1124880:intron | 50.0% | |
| TTTGATCCCAACCATGGGTC+TGG | + | chr7_3:76118362-76118381 | None:intergenic | 50.0% | |
| !! | CTGGCTTTTGATCCCAACCA+TGG | + | chr7_3:76118368-76118387 | None:intergenic | 50.0% |
| GCTGTCAACTTCAGATGGTC+AGG | - | chr7_3:76118398-76118417 | Msa1124880:intron | 50.0% | |
| ! | AGCATCATCTGAGTGCTGCT+TGG | - | chr7_3:76118422-76118441 | Msa1124880:intron | 50.0% |
| TCAAAAAACCGCCTCCCTTG+CGG | + | chr7_3:76118644-76118663 | None:intergenic | 50.0% | |
| TGGAGCGATGGTTGAACCGT+TGG | + | chr7_3:76116008-76116027 | None:intergenic | 55.0% | |
| !! | CTGCTTCCGCTGATTCCGTT+TGG | - | chr7_3:76116131-76116150 | Msa1124880:CDS | 55.0% |
| TGCCCGAAGAACTACGCTGT+CGG | - | chr7_3:76116197-76116216 | Msa1124880:CDS | 55.0% | |
| ! | GTGGTTTGAAGTGGATGGGG+AGG | - | chr7_3:76118239-76118258 | Msa1124880:CDS | 55.0% |
| TGCAGCTATGACCAGACCCA+TGG | - | chr7_3:76118348-76118367 | Msa1124880:intron | 55.0% | |
| GCTATGACCAGACCCATGGT+TGG | - | chr7_3:76118352-76118371 | Msa1124880:intron | 55.0% | |
| TTGCGGTCTCTCAACTCGCT+AGG | + | chr7_3:76118627-76118646 | None:intergenic | 55.0% | |
| ! | TAGCGAGTTGAGAGACCGCA+AGG | - | chr7_3:76118626-76118645 | Msa1124880:CDS | 55.0% |
| ! | AGCGAGTTGAGAGACCGCAA+GGG | - | chr7_3:76118627-76118646 | Msa1124880:CDS | 55.0% |
| ACTCGCTCGCGTGCGTGTTA+TGG | - | chr7_3:76115958-76115977 | Msa1124880:three_prime_UTR | 60.0% | |
| CTCGCTCGCGTGCGTGTTAT+GGG | - | chr7_3:76115959-76115978 | Msa1124880:three_prime_UTR | 60.0% | |
| TCAGGGATGTCGCCGAGACT+TGG | + | chr7_3:76116028-76116047 | None:intergenic | 60.0% | |
| !! | TACGCGCCGACCGAGTCTTT+TGG | + | chr7_3:76118328-76118347 | None:intergenic | 60.0% |
| GAGTTGAGAGACCGCAAGGG+AGG | - | chr7_3:76118630-76118649 | Msa1124880:CDS | 60.0% | |
| TTGAGAGACCGCAAGGGAGG+CGG | - | chr7_3:76118633-76118652 | Msa1124880:CDS | 60.0% | |
| GTCGCCGAGACTTGGAGCGA+TGG | + | chr7_3:76116020-76116039 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 76115787 | 76118922 | 76115787 | ID=Msa1124880;Name=Msa1124880 |
| chr7_3 | mRNA | 76115787 | 76118922 | 76115787 | ID=Msa1124880-mRNA-1;Parent=Msa1124880;Name=Msa1124880-mRNA-1;_AED=0.11;_eAED=0.11;_QI=190|1|1|1|1|1|3|254|296 |
| chr7_3 | exon | 76115787 | 76116503 | 76115787 | ID=Msa1124880-mRNA-1:exon:20688;Parent=Msa1124880-mRNA-1 |
| chr7_3 | exon | 76118216 | 76118334 | 76118216 | ID=Msa1124880-mRNA-1:exon:20687;Parent=Msa1124880-mRNA-1 |
| chr7_3 | exon | 76118424 | 76118922 | 76118424 | ID=Msa1124880-mRNA-1:exon:20686;Parent=Msa1124880-mRNA-1 |
| chr7_3 | five_prime_UTR | 76118733 | 76118922 | 76118733 | ID=Msa1124880-mRNA-1:five_prime_utr;Parent=Msa1124880-mRNA-1 |
| chr7_3 | CDS | 76118424 | 76118732 | 76118424 | ID=Msa1124880-mRNA-1:cds;Parent=Msa1124880-mRNA-1 |
| chr7_3 | CDS | 76118216 | 76118334 | 76118216 | ID=Msa1124880-mRNA-1:cds;Parent=Msa1124880-mRNA-1 |
| chr7_3 | CDS | 76116041 | 76116503 | 76116041 | ID=Msa1124880-mRNA-1:cds;Parent=Msa1124880-mRNA-1 |
| chr7_3 | three_prime_UTR | 76115787 | 76116040 | 76115787 | ID=Msa1124880-mRNA-1:three_prime_utr;Parent=Msa1124880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
