Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1082420 | XP_039684116.1 | 91.678 | 721 | 52 | 3 | 1 | 718 | 1 | 716 | 0.0 | 1313 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1082420 | sp|Q9ZSM8|EZA1_ARATH | 60.434 | 369 | 134 | 4 | 342 | 703 | 479 | 842 | 3.33e-150 | 461 |
Msa1082420 | sp|Q9ZSM8|EZA1_ARATH | 40.994 | 322 | 169 | 6 | 1 | 309 | 1 | 314 | 8.23e-60 | 219 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1082420 | G7KSU0 | 91.938 | 707 | 49 | 3 | 15 | 718 | 63 | 764 | 0.0 | 1293 |
Gene ID | Type | Classification |
---|---|---|
Msa1082420 | TR | SET |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1041050 | Msa1082420 | 0.949021 | 2.948851e-107 | -8.615850e-47 |
Msa1082420 | Msa1127210 | 0.933645 | 1.368273e-95 | -8.615850e-47 |
Msa1082420 | Msa1165450 | 0.921546 | 3.114318e-88 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1082420 | MtrunA17_Chr7g0270001 | 92.780 | 277 | 17 | 1 | 445 | 718 | 24 | 300 | 0.0 | 533 |
Msa1082420 | MtrunA17_Chr7g0270011 | 75.141 | 354 | 29 | 4 | 65 | 418 | 1 | 295 | 0.0 | 519 |
Msa1082420 | MtrunA17_Chr1g0194631 | 59.036 | 415 | 153 | 7 | 309 | 715 | 351 | 756 | 1.43e-161 | 484 |
Msa1082420 | MtrunA17_Chr1g0194631 | 51.271 | 236 | 108 | 2 | 79 | 309 | 19 | 252 | 5.88e-69 | 240 |
Msa1082420 | MtrunA17_Chr5g0401921 | 57.692 | 364 | 146 | 5 | 356 | 714 | 501 | 861 | 1.22e-133 | 415 |
Msa1082420 | MtrunA17_Chr5g0401921 | 35.354 | 297 | 168 | 3 | 31 | 303 | 42 | 338 | 1.66e-49 | 186 |
Msa1082420 | MtrunA17_Chr7g0235081 | 58.841 | 345 | 133 | 7 | 375 | 714 | 4 | 344 | 5.01e-129 | 386 |
Msa1082420 | MtrunA17_Chr7g0235091 | 45.091 | 275 | 118 | 6 | 115 | 374 | 53 | 309 | 2.62e-68 | 227 |
Msa1082420 | MtrunA17_Chr5g0405161 | 55.440 | 193 | 52 | 4 | 219 | 410 | 12 | 171 | 4.33e-57 | 193 |
Msa1082420 | MtrunA17_Chr5g0405161 | 53.571 | 56 | 26 | 0 | 211 | 266 | 166 | 221 | 5.54e-11 | 63.2 |
Msa1082420 | MtrunA17_Chr2g0297191 | 34.783 | 138 | 87 | 2 | 547 | 682 | 1014 | 1150 | 7.78e-20 | 95.1 |
Msa1082420 | MtrunA17_Chr7g0221611 | 35.537 | 121 | 75 | 2 | 565 | 682 | 904 | 1024 | 2.38e-17 | 87.0 |
Msa1082420 | MtrunA17_Chr1g0201621 | 38.532 | 109 | 65 | 1 | 577 | 683 | 95 | 203 | 3.17e-15 | 79.0 |
Msa1082420 | MtrunA17_Chr8g0347071 | 33.058 | 121 | 79 | 2 | 567 | 685 | 808 | 928 | 3.49e-15 | 79.7 |
Msa1082420 | MtrunA17_Chr1g0147121 | 34.146 | 123 | 77 | 3 | 566 | 685 | 892 | 1013 | 4.51e-15 | 79.3 |
Msa1082420 | MtrunA17_Chr1g0201311 | 38.532 | 109 | 65 | 1 | 577 | 683 | 95 | 203 | 7.14e-15 | 77.8 |
Msa1082420 | MtrunA17_Chr2g0305371 | 31.325 | 166 | 103 | 4 | 520 | 682 | 294 | 451 | 1.07e-14 | 77.4 |
Msa1082420 | MtrunA17_Chr3g0126701 | 32.231 | 121 | 80 | 2 | 567 | 685 | 922 | 1042 | 3.63e-14 | 76.6 |
Msa1082420 | MtrunA17_Chr7g0275611 | 33.871 | 124 | 78 | 3 | 567 | 687 | 823 | 945 | 4.03e-14 | 76.3 |
Msa1082420 | MtrunA17_Chr3g0125251 | 32.576 | 132 | 87 | 1 | 553 | 682 | 1311 | 1442 | 2.17e-13 | 74.3 |
Msa1082420 | MtrunA17_Chr1g0149611 | 29.921 | 127 | 80 | 2 | 572 | 689 | 369 | 495 | 1.28e-12 | 70.9 |
Msa1082420 | MtrunA17_Chr1g0149581 | 28.125 | 128 | 86 | 1 | 562 | 683 | 1517 | 1644 | 1.32e-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1082420 | AT4G02020.1 | 60.434 | 369 | 134 | 4 | 342 | 703 | 479 | 842 | 3.39e-151 | 461 |
Msa1082420 | AT4G02020.1 | 40.994 | 322 | 169 | 6 | 1 | 309 | 1 | 314 | 8.37e-61 | 219 |
Msa1082420 | AT2G23380.2 | 51.422 | 422 | 170 | 6 | 322 | 714 | 258 | 673 | 1.87e-134 | 412 |
Msa1082420 | AT2G23380.2 | 43.182 | 88 | 46 | 2 | 217 | 303 | 7 | 91 | 4.98e-15 | 79.3 |
Msa1082420 | AT2G23380.1 | 51.422 | 422 | 170 | 6 | 322 | 714 | 485 | 900 | 5.38e-133 | 415 |
Msa1082420 | AT2G23380.1 | 35.495 | 293 | 167 | 5 | 27 | 303 | 32 | 318 | 3.06e-45 | 174 |
Msa1082420 | AT1G02580.1 | 38.282 | 687 | 354 | 16 | 27 | 682 | 13 | 660 | 5.12e-132 | 406 |
Msa1082420 | AT4G02020.4 | 60.312 | 320 | 117 | 3 | 342 | 654 | 479 | 795 | 2.21e-129 | 403 |
Msa1082420 | AT4G02020.4 | 40.994 | 322 | 169 | 6 | 1 | 309 | 1 | 314 | 2.90e-61 | 220 |
Msa1082420 | AT4G02020.3 | 57.929 | 309 | 118 | 4 | 342 | 641 | 479 | 784 | 9.73e-114 | 362 |
Msa1082420 | AT4G02020.3 | 40.994 | 322 | 169 | 6 | 1 | 309 | 1 | 314 | 3.18e-61 | 220 |
Msa1082420 | AT4G02020.2 | 57.929 | 309 | 118 | 4 | 342 | 641 | 479 | 784 | 9.73e-114 | 362 |
Msa1082420 | AT4G02020.2 | 40.994 | 322 | 169 | 6 | 1 | 309 | 1 | 314 | 3.18e-61 | 220 |
Msa1082420 | AT1G02580.2 | 35.324 | 586 | 309 | 16 | 27 | 581 | 13 | 559 | 1.47e-87 | 286 |
Msa1082420 | AT5G42400.7 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1082420 | AT5G42400.2 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1082420 | AT5G42400.8 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1082420 | AT5G42400.5 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1082420 | AT5G42400.4 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1082420 | AT5G42400.1 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1082420 | AT5G42400.3 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1082420 | AT5G42400.6 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1082420 | AT2G31650.1 | 36.364 | 121 | 74 | 2 | 565 | 682 | 897 | 1017 | 2.07e-18 | 90.9 |
Msa1082420 | AT4G30860.1 | 36.774 | 155 | 86 | 4 | 531 | 682 | 299 | 444 | 3.13e-17 | 85.9 |
Msa1082420 | AT1G05830.2 | 33.884 | 121 | 77 | 2 | 565 | 682 | 918 | 1038 | 2.64e-16 | 84.0 |
Msa1082420 | AT1G05830.4 | 33.884 | 121 | 77 | 2 | 565 | 682 | 918 | 1038 | 2.64e-16 | 84.0 |
Msa1082420 | AT1G05830.1 | 33.884 | 121 | 77 | 2 | 565 | 682 | 918 | 1038 | 2.64e-16 | 84.0 |
Msa1082420 | AT1G05830.3 | 33.884 | 121 | 77 | 2 | 565 | 682 | 918 | 1038 | 2.64e-16 | 84.0 |
Msa1082420 | AT1G76710.4 | 40.367 | 109 | 63 | 1 | 577 | 683 | 100 | 208 | 2.67e-16 | 82.8 |
Msa1082420 | AT1G76710.3 | 40.367 | 109 | 63 | 1 | 577 | 683 | 100 | 208 | 2.99e-16 | 82.8 |
Msa1082420 | AT1G76710.2 | 40.367 | 109 | 63 | 1 | 577 | 683 | 100 | 208 | 3.13e-16 | 82.8 |
Msa1082420 | AT1G76710.1 | 40.367 | 109 | 63 | 1 | 577 | 683 | 100 | 208 | 3.13e-16 | 82.8 |
Msa1082420 | AT4G27910.1 | 33.884 | 121 | 78 | 2 | 567 | 685 | 886 | 1006 | 7.50e-15 | 79.3 |
Msa1082420 | AT5G53430.1 | 33.607 | 122 | 79 | 2 | 566 | 685 | 901 | 1022 | 1.20e-14 | 78.6 |
Msa1082420 | AT1G77300.1 | 36.090 | 133 | 81 | 2 | 553 | 682 | 1013 | 1144 | 2.04e-13 | 74.7 |
Msa1082420 | AT1G77300.2 | 36.090 | 133 | 81 | 2 | 553 | 682 | 1013 | 1144 | 2.44e-13 | 74.7 |
Msa1082420 | AT3G61740.2 | 30.000 | 120 | 81 | 2 | 567 | 683 | 840 | 959 | 1.31e-12 | 72.0 |
Msa1082420 | AT3G61740.1 | 30.000 | 120 | 81 | 2 | 567 | 683 | 876 | 995 | 2.01e-12 | 71.2 |
Msa1082420 | AT3G59960.3 | 31.967 | 122 | 81 | 2 | 563 | 682 | 108 | 229 | 5.14e-12 | 67.8 |
Msa1082420 | AT3G59960.2 | 31.967 | 122 | 81 | 2 | 563 | 682 | 108 | 229 | 5.14e-12 | 67.8 |
Msa1082420 | AT3G59960.4 | 31.967 | 122 | 81 | 2 | 563 | 682 | 108 | 229 | 5.14e-12 | 67.8 |
Msa1082420 | AT3G59960.1 | 31.967 | 122 | 81 | 2 | 563 | 682 | 108 | 229 | 8.31e-12 | 67.8 |
Find 116 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGAATTGAACTCACTTTAA+TGG | 0.116068 | 7_2:+82532746 | None:intergenic |
TGTATATTTGTCAGATTCTT+TGG | 0.176923 | 7_2:-82528894 | Msa1082420:intron |
TGGATTCAGCTCGTTCATTT+TGG | 0.198819 | 7_2:+82532766 | None:intergenic |
CTCTACGATCTTCATCATTT+TGG | 0.203520 | 7_2:+82531169 | None:intergenic |
TTGTAGATTGTGTTTGTTAA+TGG | 0.242431 | 7_2:-82527963 | Msa1082420:intron |
TAGAAATGTTTGGGAGAAAT+AGG | 0.261350 | 7_2:-82530548 | Msa1082420:intron |
CCGTATCATTCAAGTTAAAA+AGG | 0.263836 | 7_2:+82528637 | None:intergenic |
TTGTATGAGGGGCTTAAATT+TGG | 0.276488 | 7_2:-82530712 | Msa1082420:CDS |
TCAGCGAGAGCACTGTTTCT+TGG | 0.281828 | 7_2:+82527779 | None:intergenic |
TCAACCCGATCATCAAGTTT+TGG | 0.284315 | 7_2:-82532177 | Msa1082420:CDS |
CCTTCAGGTTCTTGCCAAAC+TGG | 0.285004 | 7_2:+82530795 | None:intergenic |
CATGGATCCATGGACGAAAA+TGG | 0.290421 | 7_2:-82530354 | Msa1082420:CDS |
CATGGTTCTCTGGGACCTTC+AGG | 0.309857 | 7_2:+82530780 | None:intergenic |
TGGATGGGGAGCTTTCTTAA+AGG | 0.310146 | 7_2:-82528854 | Msa1082420:intron |
TCTTTCGGATTGGAAACTTT+TGG | 0.327216 | 7_2:-82530595 | Msa1082420:CDS |
TTGAAGGGAATAGAAATGTT+TGG | 0.329797 | 7_2:-82530558 | Msa1082420:CDS |
CTTGTGGACTTCCATCTAAA+TGG | 0.334827 | 7_2:-82529826 | Msa1082420:CDS |
TGTAGATTGTGTTTGTTAAT+GGG | 0.343535 | 7_2:-82527962 | Msa1082420:intron |
AGGAAAAGCTTCAGAAGAAT+AGG | 0.345098 | 7_2:-82532328 | Msa1082420:CDS |
GTCATCACCACATGGTTCTC+TGG | 0.363244 | 7_2:+82530770 | None:intergenic |
TGGGCAAGGTCTGATGTTGC+TGG | 0.366049 | 7_2:-82528874 | Msa1082420:CDS |
AGGTACCAGTTCAGAAATTC+AGG | 0.366551 | 7_2:-82531377 | Msa1082420:intron |
AAGGTCTGATGTTGCTGGAT+GGG | 0.377084 | 7_2:-82528869 | Msa1082420:CDS |
GTATATTTGTCAGATTCTTT+GGG | 0.380194 | 7_2:-82528893 | Msa1082420:intron |
TGAAGGGAATAGAAATGTTT+GGG | 0.387527 | 7_2:-82530557 | Msa1082420:CDS |
AAATGTATCCAAGACGTATA+TGG | 0.398309 | 7_2:+82532089 | None:intergenic |
TGATATTACTAACATGGCCT+TGG | 0.406456 | 7_2:+82532283 | None:intergenic |
ACCATGGCTTCATAAACTTC+TGG | 0.412370 | 7_2:-82527850 | Msa1082420:CDS |
TTGTGACATCTTTATTATGA+AGG | 0.413196 | 7_2:+82530742 | None:intergenic |
TTTGACGAACAAGATACATT+TGG | 0.417321 | 7_2:-82532802 | Msa1082420:CDS |
TTGATGATCGGGTTGATGAT+TGG | 0.418627 | 7_2:+82532184 | None:intergenic |
CAAGGTCTGATGTTGCTGGA+TGG | 0.418842 | 7_2:-82528870 | Msa1082420:CDS |
TGTTGGATCATCATCTTCCT+TGG | 0.421957 | 7_2:+82527818 | None:intergenic |
GGAGGAGTCTACTACTCTTT+CGG | 0.427997 | 7_2:-82530610 | Msa1082420:CDS |
AGTTCGAAAAGCAACCAGTT+TGG | 0.430460 | 7_2:-82530809 | Msa1082420:CDS |
TCACAATTAGTAATTGTATG+AGG | 0.430536 | 7_2:-82530725 | Msa1082420:CDS |
CTTCATAAACTTCTGGATGA+TGG | 0.434437 | 7_2:-82527843 | Msa1082420:CDS |
GGAAAAGCTTCAGAAGAATA+GGG | 0.434496 | 7_2:-82532327 | Msa1082420:CDS |
AGGTCTGATGTTGCTGGATG+GGG | 0.436683 | 7_2:-82528868 | Msa1082420:CDS |
TCTCCCAAAACTTGATGATC+GGG | 0.437642 | 7_2:+82532173 | None:intergenic |
TATGTCGAAATTGTTGGGTT+AGG | 0.439250 | 7_2:-82529480 | Msa1082420:intron |
TGATGATCGGGTTGATGATT+GGG | 0.450857 | 7_2:+82532185 | None:intergenic |
CTCTCCCAAAACTTGATGAT+CGG | 0.452457 | 7_2:+82532172 | None:intergenic |
CATTACCTGAATTTCTGAAC+TGG | 0.453071 | 7_2:+82531372 | None:intergenic |
GCAAAGGAACACATTGAAGC+TGG | 0.455412 | 7_2:-82527918 | Msa1082420:CDS |
CACTTGTGTGACTCAATAGA+AGG | 0.458241 | 7_2:-82530642 | Msa1082420:CDS |
AAATGTATATTATGATCATC+AGG | 0.462380 | 7_2:-82531846 | Msa1082420:CDS |
CAACAATTTCGACATACATC+AGG | 0.464497 | 7_2:+82529487 | None:intergenic |
AGGGTGAAGACCGATTTATT+AGG | 0.467728 | 7_2:-82531748 | Msa1082420:intron |
AAATATTCTTCAAAATCTTG+TGG | 0.468339 | 7_2:-82529842 | Msa1082420:CDS |
TCAGGATGCCAAGCATCAAC+AGG | 0.472001 | 7_2:-82532118 | Msa1082420:CDS |
GGAAGTGTTGAGTATTGTTA+AGG | 0.491359 | 7_2:-82531410 | Msa1082420:CDS |
AACAGTTTCATCAATGGTCT+CGG | 0.496658 | 7_2:-82533966 | None:intergenic |
ATCTTTGATTGTCCTTTGCA+CGG | 0.496740 | 7_2:-82530942 | Msa1082420:CDS |
GCATCAAAAGCTAATTGCTA+TGG | 0.496913 | 7_2:-82528369 | Msa1082420:CDS |
TTTGTCAATAGTTGTGGAGA+TGG | 0.500177 | 7_2:-82529063 | Msa1082420:intron |
AAAACATGATGCTTCTTGTA+AGG | 0.500417 | 7_2:-82528999 | Msa1082420:CDS |
ATGATCAAAAGTATCTAAAG+AGG | 0.509607 | 7_2:+82531101 | None:intergenic |
CGTCTTGGATACATTTAGCC+AGG | 0.511255 | 7_2:-82532082 | Msa1082420:intron |
AGTCTACTACTCTTTCGGAT+TGG | 0.511550 | 7_2:-82530605 | Msa1082420:CDS |
TTTGTCAGATTCTTTGGGCA+AGG | 0.512971 | 7_2:-82528888 | Msa1082420:intron |
CACAATTAGTAATTGTATGA+GGG | 0.514622 | 7_2:-82530724 | Msa1082420:CDS |
CAAAGGAACACATTGAAGCT+GGG | 0.517669 | 7_2:-82527917 | Msa1082420:CDS |
GTAGATTGTGTTTGTTAATG+GGG | 0.518073 | 7_2:-82527961 | Msa1082420:intron |
CTGATGTATGTCGAAATTGT+TGG | 0.519505 | 7_2:-82529486 | Msa1082420:CDS |
GGCATCCTGATACTTCTCAC+AGG | 0.523294 | 7_2:+82532131 | None:intergenic |
TGATGTATGTCGAAATTGTT+GGG | 0.532358 | 7_2:-82529485 | Msa1082420:CDS |
TCATCACCACATGGTTCTCT+GGG | 0.539476 | 7_2:+82530771 | None:intergenic |
GGTTACCTCCATATACGTCT+TGG | 0.539814 | 7_2:-82532097 | Msa1082420:CDS |
GAAAGAATATTTCCTCCACT+TGG | 0.540932 | 7_2:+82532245 | None:intergenic |
GTCAATGCCACATGGATCCA+TGG | 0.545867 | 7_2:-82530364 | Msa1082420:CDS |
TAGTTGTGGAGATGGTAACT+TGG | 0.551130 | 7_2:-82529055 | Msa1082420:CDS |
ACATGGACATTGCTTTCCAC+AGG | 0.551199 | 7_2:+82529733 | None:intergenic |
AAAAGCTAATTGCTATGGAA+AGG | 0.554769 | 7_2:-82528364 | Msa1082420:intron |
TCTTCAAAGTCAACTTTCCA+AGG | 0.557371 | 7_2:-82532300 | Msa1082420:CDS |
TCTCTCGAAGCTGCAAAACA+TGG | 0.560977 | 7_2:+82529517 | None:intergenic |
TCTTGTAAGGAAACAACAAA+AGG | 0.562281 | 7_2:-82528986 | Msa1082420:intron |
ATGAGATGACATCGAGGTCA+AGG | 0.562748 | 7_2:-82529898 | Msa1082420:CDS |
AGTATTGTTAAGGATGTCAT+CGG | 0.565880 | 7_2:-82531400 | Msa1082420:CDS |
AGTTGTGGAGATGGTAACTT+GGG | 0.568538 | 7_2:-82529054 | Msa1082420:CDS |
AGAAACAGTGCTCTCGCTGA+TGG | 0.570720 | 7_2:-82527776 | None:intergenic |
ACTTCTGGATGATGGTTCCA+AGG | 0.574557 | 7_2:-82527835 | Msa1082420:CDS |
TCCAGAAGTTTATGAAGCCA+TGG | 0.577075 | 7_2:+82527849 | None:intergenic |
GGAGGTAACCTGTTGATGCT+TGG | 0.585377 | 7_2:+82532110 | None:intergenic |
CATATAGAAGCTGATAAGCG+TGG | 0.585855 | 7_2:-82528690 | Msa1082420:CDS |
ACAATTAGTAATTGTATGAG+GGG | 0.586473 | 7_2:-82530723 | Msa1082420:CDS |
AATAGAAGGACAAGCTGAGG+AGG | 0.588743 | 7_2:-82530628 | Msa1082420:CDS |
AGGACGGTATTTGATGAACA+TGG | 0.591105 | 7_2:-82531442 | Msa1082420:CDS |
CAAGAACTATTAAGAAGACA+TGG | 0.596810 | 7_2:+82529716 | None:intergenic |
GTTAATGGGGATCATCGAGT+AGG | 0.597741 | 7_2:-82527948 | Msa1082420:CDS |
AACAATTTCGACATACATCA+GGG | 0.601740 | 7_2:+82529488 | None:intergenic |
TGAAGAGTCAAACGAGCACA+AGG | 0.605193 | 7_2:-82531792 | Msa1082420:CDS |
GTATACACCTTGTGAATGTG+AGG | 0.614412 | 7_2:-82529759 | Msa1082420:CDS |
GGAACACATTGAAGCTGGGG+AGG | 0.615949 | 7_2:-82527913 | Msa1082420:CDS |
TCGAGTAGGAATATTTGCAA+AGG | 0.624767 | 7_2:-82527934 | Msa1082420:CDS |
CTCAATAGAAGGACAAGCTG+AGG | 0.630020 | 7_2:-82530631 | Msa1082420:CDS |
AAAGGAACACATTGAAGCTG+GGG | 0.641785 | 7_2:-82527916 | Msa1082420:CDS |
CCAGTTTGGCAAGAACCTGA+AGG | 0.643958 | 7_2:-82530795 | Msa1082420:CDS |
TGTGAATGTGAGGGAGCCTG+TGG | 0.648105 | 7_2:-82529749 | Msa1082420:CDS |
GCTGAAGAGTCAATGCCACA+TGG | 0.648318 | 7_2:-82530372 | Msa1082420:CDS |
AATGAATCACTACCAAGTGG+AGG | 0.658347 | 7_2:-82532257 | Msa1082420:CDS |
CAGGCTCCCTCACATTCACA+AGG | 0.660511 | 7_2:+82529752 | None:intergenic |
GTATATTATGATCATCAGGA+AGG | 0.661006 | 7_2:-82531842 | Msa1082420:CDS |
TGTATCCAAGACGTATATGG+AGG | 0.666836 | 7_2:+82532092 | None:intergenic |
TGATGAACATGGTTTAACTG+AGG | 0.669808 | 7_2:-82531431 | Msa1082420:CDS |
AGAGTCGTCTCATCGTGGAG+AGG | 0.678757 | 7_2:-82529031 | Msa1082420:CDS |
TATACACCTTGTGAATGTGA+GGG | 0.684335 | 7_2:-82529758 | Msa1082420:CDS |
ATTGTTAAGGATGTCATCGG+AGG | 0.690600 | 7_2:-82531397 | Msa1082420:CDS |
TTGGGAGAGTCGTCTCATCG+TGG | 0.699122 | 7_2:-82529036 | Msa1082420:CDS |
AGGTAACAGTCATCACCACA+TGG | 0.703610 | 7_2:+82530762 | None:intergenic |
ACGAAAATAGTCGACCACCA+TGG | 0.705776 | 7_2:-82527866 | Msa1082420:CDS |
AGAAGTTTATGAAGCCATGG+TGG | 0.706867 | 7_2:+82527852 | None:intergenic |
TTGGGACTATAGAACTTACA+CGG | 0.709896 | 7_2:+82532203 | None:intergenic |
AGGACAATGAGATGACATCG+AGG | 0.791829 | 7_2:-82529904 | Msa1082420:CDS |
GAAGGTCCCAGAGAACCATG+TGG | 0.793045 | 7_2:-82530777 | Msa1082420:CDS |
GGACTATAGAACTTACACGG+TGG | 0.797366 | 7_2:+82532206 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAATTATTAATTAATAA+TGG | + | chr7_2:82530887-82530906 | None:intergenic | 0.0% |
!!! | ATTATTATTTTGTTCCAAAT+TGG | - | chr7_2:82528116-82528135 | Msa1082420:intron | 15.0% |
!! | AATTATATCACTAAATAGAT+GGG | + | chr7_2:82528341-82528360 | None:intergenic | 15.0% |
!! | AAATTATATCACTAAATAGA+TGG | + | chr7_2:82528342-82528361 | None:intergenic | 15.0% |
!! | TAAAAAATATCTCAAAAGTA+AGG | - | chr7_2:82528558-82528577 | Msa1082420:intron | 15.0% |
!! | TACTAATAATACTTATTGTA+TGG | - | chr7_2:82528865-82528884 | Msa1082420:CDS | 15.0% |
!!! | TTATTTTCCATTATAAATTG+AGG | - | chr7_2:82529074-82529093 | Msa1082420:intron | 15.0% |
!!! | TATTTTCCATTATAAATTGA+GGG | - | chr7_2:82529075-82529094 | Msa1082420:intron | 15.0% |
!!! | ATTTTTTGATATTACTAACA+TGG | + | chr7_2:82529458-82529477 | None:intergenic | 15.0% |
!!! | TTTTGATTTACCTAATAAAT+CGG | + | chr7_2:82529997-82530016 | None:intergenic | 15.0% |
!! | TTGTGACTATTTAATATATT+AGG | - | chr7_2:82530270-82530289 | Msa1082420:intron | 15.0% |
!! | ATATAAAAATATCAAGGAAA+AGG | - | chr7_2:82530539-82530558 | Msa1082420:intron | 15.0% |
!!! | TAACCATTTTTCTAATATTT+TGG | - | chr7_2:82531245-82531264 | Msa1082420:intron | 15.0% |
!!! | ATGTTATTTTAGTAAACTAT+TGG | - | chr7_2:82531608-82531627 | Msa1082420:intron | 15.0% |
!!! | TGTTATTTTAGTAAACTATT+GGG | - | chr7_2:82531609-82531628 | Msa1082420:intron | 15.0% |
!!! | ATACTTAATTCAATTTTACA+AGG | + | chr7_2:82532518-82532537 | None:intergenic | 15.0% |
!!! | TAATATAATGCTTTTAACTA+TGG | - | chr7_2:82532643-82532662 | Msa1082420:intron | 15.0% |
!! | ACAAATATACAAATCAATTA+AGG | + | chr7_2:82532829-82532848 | None:intergenic | 15.0% |
!!! | TATCTATTATTTTGTTTTAG+TGG | - | chr7_2:82533506-82533525 | Msa1082420:intron | 15.0% |
!! | TTTGTTTCATCATTTCAAAT+AGG | - | chr7_2:82528167-82528186 | Msa1082420:intron | 20.0% |
!! | TTTCAAATAGGAATAGAAAT+TGG | - | chr7_2:82528179-82528198 | Msa1082420:intron | 20.0% |
!! | TTCAAATAGGAATAGAAATT+GGG | - | chr7_2:82528180-82528199 | Msa1082420:intron | 20.0% |
!! | ATTATATCACTAAATAGATG+GGG | + | chr7_2:82528340-82528359 | None:intergenic | 20.0% |
!!! | AAATGGTGGAAATTAATTTA+TGG | + | chr7_2:82528441-82528460 | None:intergenic | 20.0% |
!! | TTAGAATAATAGAAAAATGG+TGG | + | chr7_2:82528455-82528474 | None:intergenic | 20.0% |
!! | GGATTAGAATAATAGAAAAA+TGG | + | chr7_2:82528458-82528477 | None:intergenic | 20.0% |
!! | TTCTATTATTCTAATCCATT+TGG | - | chr7_2:82528461-82528480 | Msa1082420:intron | 20.0% |
!! | TCTATTATTCTAATCCATTT+GGG | - | chr7_2:82528462-82528481 | Msa1082420:intron | 20.0% |
!!! | ATAATTTTTCACATTAGAGA+CGG | - | chr7_2:82528613-82528632 | Msa1082420:intron | 20.0% |
!! | ATAATACTTATTGTATGGAT+AGG | - | chr7_2:82528870-82528889 | Msa1082420:CDS | 20.0% |
!!! | ATTTTCCATTATAAATTGAG+GGG | - | chr7_2:82529076-82529095 | Msa1082420:intron | 20.0% |
!!! | AGTTAATTAAGTTGTTTTTG+AGG | - | chr7_2:82529131-82529150 | Msa1082420:intron | 20.0% |
!!! | TAGTTCCTCTTAATTTTTTA+TGG | - | chr7_2:82529163-82529182 | Msa1082420:intron | 20.0% |
!! | AAATGTATATTATGATCATC+AGG | - | chr7_2:82529886-82529905 | Msa1082420:CDS | 20.0% |
!!! | CACAATTAGTATAAACTTTT+CGG | + | chr7_2:82530191-82530210 | None:intergenic | 20.0% |
!! | CAAGATAATATGTTTAGTTA+AGG | + | chr7_2:82530253-82530272 | None:intergenic | 20.0% |
!! | GACTATTTAATATATTAGGA+CGG | - | chr7_2:82530274-82530293 | Msa1082420:intron | 20.0% |
!! | TCATATTATAGACAACAATA+TGG | + | chr7_2:82530724-82530743 | None:intergenic | 20.0% |
!! | CAATGAAGAAAAAAATGATA+TGG | - | chr7_2:82531050-82531069 | Msa1082420:intron | 20.0% |
!! | GAAAAAGAATTATACTTGAA+GGG | - | chr7_2:82531159-82531178 | Msa1082420:CDS | 20.0% |
!! | AAGCCAAAATATTAGAAAAA+TGG | + | chr7_2:82531251-82531270 | None:intergenic | 20.0% |
!!! | GTTATTTTAGTAAACTATTG+GGG | - | chr7_2:82531610-82531629 | Msa1082420:intron | 20.0% |
!!! | TTATTTTAGTAAACTATTGG+GGG | - | chr7_2:82531611-82531630 | Msa1082420:intron | 20.0% |
!! | AAATATTCTTCAAAATCTTG+TGG | - | chr7_2:82531890-82531909 | Msa1082420:CDS | 20.0% |
!!! | TCCTATATGTATTATTTTCT+CGG | - | chr7_2:82532307-82532326 | Msa1082420:CDS | 20.0% |
!!! | AAAAATCATTTTTGTTTGCT+GGG | + | chr7_2:82532993-82533012 | None:intergenic | 20.0% |
!!! | AAAAAATCATTTTTGTTTGC+TGG | + | chr7_2:82532994-82533013 | None:intergenic | 20.0% |
!!! | GCAAACAAAAATGATTTTTT+AGG | - | chr7_2:82532994-82533013 | Msa1082420:intron | 20.0% |
!! | ATTCATAGTATAGGTTAATA+TGG | + | chr7_2:82533284-82533303 | None:intergenic | 20.0% |
!! | ACTGAAAAAATTCATAGTAT+AGG | + | chr7_2:82533293-82533312 | None:intergenic | 20.0% |
!!! | GGTTTTGCTCAATTTATTTT+AGG | - | chr7_2:82527854-82527873 | Msa1082420:CDS | 25.0% |
! | ATAATAATGCACGATTATCT+AGG | + | chr7_2:82528104-82528123 | None:intergenic | 25.0% |
!!! | CATCATTTTTCTATCCAATT+TGG | + | chr7_2:82528133-82528152 | None:intergenic | 25.0% |
! | ATATAAGTATATGAGATCCA+GGG | + | chr7_2:82528236-82528255 | None:intergenic | 25.0% |
! | ATACTTGAACCCATTATATA+CGG | + | chr7_2:82528306-82528325 | None:intergenic | 25.0% |
! | TAATTTATGGTAGTAGGTTT+GGG | + | chr7_2:82528428-82528447 | None:intergenic | 25.0% |
! | TTAATTTATGGTAGTAGGTT+TGG | + | chr7_2:82528429-82528448 | None:intergenic | 25.0% |
! | GGAAATTAATTTATGGTAGT+AGG | + | chr7_2:82528434-82528453 | None:intergenic | 25.0% |
!! | TTTTCCATTATAAATTGAGG+GGG | - | chr7_2:82529077-82529096 | Msa1082420:intron | 25.0% |
! | CAAGTCCATAAAAAATTAAG+AGG | + | chr7_2:82529171-82529190 | None:intergenic | 25.0% |
!!! | CTCTTAATTTTTTATGGACT+TGG | - | chr7_2:82529169-82529188 | Msa1082420:intron | 25.0% |
!!! | CTTTTACGTAATTGTTGTTT+TGG | - | chr7_2:82529268-82529287 | Msa1082420:intron | 25.0% |
! | GATAATTAAGATTGACTACA+TGG | + | chr7_2:82529377-82529396 | None:intergenic | 25.0% |
! | AATCTTAATTATCTTTCCTC+AGG | - | chr7_2:82529384-82529403 | Msa1082420:intron | 25.0% |
! | CCTAAAAAATTTCATGTAAG+AGG | + | chr7_2:82529714-82529733 | None:intergenic | 25.0% |
!!! | CCTCTTACATGAAATTTTTT+AGG | - | chr7_2:82529711-82529730 | Msa1082420:CDS | 25.0% |
! | AGATGACACAAATTTAACAT+AGG | + | chr7_2:82529788-82529807 | None:intergenic | 25.0% |
!! | ATATGTAATACATGTTTTGC+TGG | - | chr7_2:82530161-82530180 | Msa1082420:intron | 25.0% |
!! | AATTAGTATAAACTTTTCGG+AGG | + | chr7_2:82530188-82530207 | None:intergenic | 25.0% |
!!! | ATGATCAAAAGTATCTAAAG+AGG | + | chr7_2:82530634-82530653 | None:intergenic | 25.0% |
! | TATTATAGACAACAATATGG+TGG | + | chr7_2:82530721-82530740 | None:intergenic | 25.0% |
! | AAGAAATGAATGAAGAAACA+TGG | + | chr7_2:82530849-82530868 | None:intergenic | 25.0% |
! | TTGTGACATCTTTATTATGA+AGG | + | chr7_2:82530993-82531012 | None:intergenic | 25.0% |
! | TCACAATTAGTAATTGTATG+AGG | - | chr7_2:82531007-82531026 | Msa1082420:intron | 25.0% |
! | CACAATTAGTAATTGTATGA+GGG | - | chr7_2:82531008-82531027 | Msa1082420:intron | 25.0% |
! | ACAATTAGTAATTGTATGAG+GGG | - | chr7_2:82531009-82531028 | Msa1082420:intron | 25.0% |
! | TGAAGAAAAAAATGATATGG+AGG | - | chr7_2:82531053-82531072 | Msa1082420:intron | 25.0% |
! | GGAAAAAGAATTATACTTGA+AGG | - | chr7_2:82531158-82531177 | Msa1082420:CDS | 25.0% |
!!! | ATCGTCAAATTGTTTTTGAA+TGG | - | chr7_2:82531794-82531813 | Msa1082420:CDS | 25.0% |
!!! | TCGTCAAATTGTTTTTGAAT+GGG | - | chr7_2:82531795-82531814 | Msa1082420:CDS | 25.0% |
! | TTTAATTATGTTCCTTTCGA+TGG | - | chr7_2:82532072-82532091 | Msa1082420:intron | 25.0% |
!! | CCTATATGTATTATTTTCTC+GGG | - | chr7_2:82532308-82532327 | Msa1082420:CDS | 25.0% |
! | TAGTACTTAATTCAAGTACA+AGG | + | chr7_2:82532405-82532424 | None:intergenic | 25.0% |
!! | TAGGTCATAAGTAATGTTTT+TGG | - | chr7_2:82532476-82532495 | Msa1082420:intron | 25.0% |
! | TGTATATTTGTCAGATTCTT+TGG | - | chr7_2:82532838-82532857 | Msa1082420:CDS | 25.0% |
! | GTATATTTGTCAGATTCTTT+GGG | - | chr7_2:82532839-82532858 | Msa1082420:CDS | 25.0% |
!!! | AAAATCATTTTTGTTTGCTG+GGG | + | chr7_2:82532992-82533011 | None:intergenic | 25.0% |
!!! | CCTTTTTAACTTGAATGATA+CGG | - | chr7_2:82533095-82533114 | Msa1082420:intron | 25.0% |
! | TTTGAATAACAGAAGGAATA+TGG | + | chr7_2:82533684-82533703 | None:intergenic | 25.0% |
!!! | TTGTAGTTTTGAATAACAGA+AGG | + | chr7_2:82533691-82533710 | None:intergenic | 25.0% |
! | ATTGAATTGCAAATAATGTG+TGG | - | chr7_2:82533742-82533761 | Msa1082420:intron | 25.0% |
!! | TTGTAGATTGTGTTTGTTAA+TGG | - | chr7_2:82533769-82533788 | Msa1082420:intron | 25.0% |
!! | TGTAGATTGTGTTTGTTAAT+GGG | - | chr7_2:82533770-82533789 | Msa1082420:intron | 25.0% |
CAGATAAAGTATGAGATTGA+TGG | + | chr7_2:82527835-82527854 | None:intergenic | 30.0% | |
CATCAATCTCATACTTTATC+TGG | - | chr7_2:82527833-82527852 | Msa1082420:CDS | 30.0% | |
TATCATCAATTCTTCACACA+TGG | - | chr7_2:82528057-82528076 | Msa1082420:intron | 30.0% | |
AAATAGGAATAGAAATTGGG+CGG | - | chr7_2:82528183-82528202 | Msa1082420:intron | 30.0% | |
CATATAAGTATATGAGATCC+AGG | + | chr7_2:82528237-82528256 | None:intergenic | 30.0% | |
TACTTGAACCCATTATATAC+GGG | + | chr7_2:82528305-82528324 | None:intergenic | 30.0% | |
AATTTATGGTAGTAGGTTTG+GGG | + | chr7_2:82528427-82528446 | None:intergenic | 30.0% | |
! | AGTATTTTTCTACTCCCAAA+TGG | + | chr7_2:82528479-82528498 | None:intergenic | 30.0% |
TATTTGTCAATTGCAAACCA+GGG | - | chr7_2:82528511-82528530 | Msa1082420:intron | 30.0% | |
! | ATCATTGTGAATATTTTCCC+TGG | + | chr7_2:82528531-82528550 | None:intergenic | 30.0% |
AAAGTAAGGATGACATTTAG+AGG | - | chr7_2:82528572-82528591 | Msa1082420:intron | 30.0% | |
! | AAGTGATTTGAAACTAAGCA+TGG | + | chr7_2:82528774-82528793 | None:intergenic | 30.0% |
TTGTATGGATAGGAAAAACA+TGG | - | chr7_2:82528880-82528899 | Msa1082420:CDS | 30.0% | |
TTTGACGAACAAGATACATT+TGG | - | chr7_2:82528930-82528949 | Msa1082420:intron | 30.0% | |
CCATTAAAGTGAGTTCAATT+CGG | - | chr7_2:82528986-82529005 | Msa1082420:intron | 30.0% | |
ATTTCCCCCTCAATTTATAA+TGG | + | chr7_2:82529084-82529103 | None:intergenic | 30.0% | |
AAAAGAGAATGCTTCATGTA+AGG | + | chr7_2:82529253-82529272 | None:intergenic | 30.0% | |
!!! | TTACGTAATTGTTGTTTTGG+TGG | - | chr7_2:82529271-82529290 | Msa1082420:intron | 30.0% |
CTTGCTTATAGAAATATGCA+GGG | + | chr7_2:82529354-82529373 | None:intergenic | 30.0% | |
AAAAATGAATCACTACCAAG+TGG | - | chr7_2:82529472-82529491 | Msa1082420:intron | 30.0% | |
AAATGTATCCAAGACGTATA+TGG | + | chr7_2:82529646-82529665 | None:intergenic | 30.0% | |
ATTTATAAGTCAAACACACC+TGG | + | chr7_2:82529671-82529690 | None:intergenic | 30.0% | |
GTATATTATGATCATCAGGA+AGG | - | chr7_2:82529890-82529909 | Msa1082420:CDS | 30.0% | |
! | AGTTGAACGTAAATTTTCTC+AGG | - | chr7_2:82529964-82529983 | Msa1082420:intron | 30.0% |
! | GTTGAACGTAAATTTTCTCA+GGG | - | chr7_2:82529965-82529984 | Msa1082420:intron | 30.0% |
AGTATTGTTAAGGATGTCAT+CGG | - | chr7_2:82530332-82530351 | Msa1082420:CDS | 30.0% | |
TGTTCTCAATCAAAATATGC+AGG | - | chr7_2:82530512-82530531 | Msa1082420:intron | 30.0% | |
GGAGCGATATAAAAATATCA+AGG | - | chr7_2:82530533-82530552 | Msa1082420:intron | 30.0% | |
! | ACAATATGGTGGTGAAAAAA+AGG | + | chr7_2:82530710-82530729 | None:intergenic | 30.0% |
TTGAAGGGAATAGAAATGTT+TGG | - | chr7_2:82531174-82531193 | Msa1082420:CDS | 30.0% | |
TGAAGGGAATAGAAATGTTT+GGG | - | chr7_2:82531175-82531194 | Msa1082420:CDS | 30.0% | |
TAGAAATGTTTGGGAGAAAT+AGG | - | chr7_2:82531184-82531203 | Msa1082420:CDS | 30.0% | |
! | TTTTATGATGAAGACTTGCA+AGG | - | chr7_2:82531317-82531336 | Msa1082420:intron | 30.0% |
ATTTGACGATCTTTGAATAG+TGG | + | chr7_2:82531784-82531803 | None:intergenic | 30.0% | |
!!! | TTTGAATGGGTTATTTTGCT+AGG | - | chr7_2:82531808-82531827 | Msa1082420:CDS | 30.0% |
! | CTTCTTCTTTTCCATTTAGA+TGG | + | chr7_2:82531920-82531939 | None:intergenic | 30.0% |
TACTGATGAGAAAAACAAAC+TGG | - | chr7_2:82531943-82531962 | Msa1082420:intron | 30.0% | |
CAAGAACTATTAAGAAGACA+TGG | + | chr7_2:82532019-82532038 | None:intergenic | 30.0% | |
! | TCTTGCTGTGAAAAATATTG+CGG | - | chr7_2:82532034-82532053 | Msa1082420:intron | 30.0% |
! | CATAATTGTTTTCCATCGAA+AGG | + | chr7_2:82532087-82532106 | None:intergenic | 30.0% |
! | CAGTTATATTTTCTACCTTC+AGG | - | chr7_2:82532120-82532139 | Msa1082420:CDS | 30.0% |
AAGCTCTGTAAAAATCGATT+TGG | - | chr7_2:82532149-82532168 | Msa1082420:CDS | 30.0% | |
AACAATTTCGACATACATCA+GGG | + | chr7_2:82532247-82532266 | None:intergenic | 30.0% | |
TGATGTATGTCGAAATTGTT+GGG | - | chr7_2:82532247-82532266 | Msa1082420:CDS | 30.0% | |
CCCGAGAAAATAATACATAT+AGG | + | chr7_2:82532311-82532330 | None:intergenic | 30.0% | |
! | TGTATTATTTTCTCGGGTAA+AGG | - | chr7_2:82532314-82532333 | Msa1082420:CDS | 30.0% |
! | GTATTATTTTCTCGGGTAAA+GGG | - | chr7_2:82532315-82532334 | Msa1082420:CDS | 30.0% |
! | TATTATTTTCTCGGGTAAAG+GGG | - | chr7_2:82532316-82532335 | Msa1082420:CDS | 30.0% |
!! | AAACCCTCTCTATTATTTTG+TGG | - | chr7_2:82532366-82532385 | Msa1082420:intron | 30.0% |
! | ATAGAGAGTACAATTTGCTT+AGG | + | chr7_2:82532573-82532592 | None:intergenic | 30.0% |
TATTAAATCATTTCAGCCAG+AGG | - | chr7_2:82532599-82532618 | Msa1082420:intron | 30.0% | |
!! | AATTTAGTTTGAATCACCTC+TGG | + | chr7_2:82532618-82532637 | None:intergenic | 30.0% |
AAAACATGATGCTTCTTGTA+AGG | - | chr7_2:82532733-82532752 | Msa1082420:intron | 30.0% | |
TCTTGTAAGGAAACAACAAA+AGG | - | chr7_2:82532746-82532765 | Msa1082420:intron | 30.0% | |
GACAATTGTTAATACACTTC+AGG | - | chr7_2:82532966-82532985 | Msa1082420:intron | 30.0% | |
! | CCGTATCATTCAAGTTAAAA+AGG | + | chr7_2:82533098-82533117 | None:intergenic | 30.0% |
CATAGAAGATATGCTAGAAT+AGG | + | chr7_2:82533160-82533179 | None:intergenic | 30.0% | |
CTATTCTAGCATATCTTCTA+TGG | - | chr7_2:82533158-82533177 | Msa1082420:intron | 30.0% | |
AAAAGCTAATTGCTATGGAA+AGG | - | chr7_2:82533368-82533387 | Msa1082420:intron | 30.0% | |
TCTTATTGAAAACGTGTCTT+TGG | - | chr7_2:82533430-82533449 | Msa1082420:intron | 30.0% | |
!! | AAGTAGTGGTGCTATAATTA+AGG | - | chr7_2:82533549-82533568 | Msa1082420:intron | 30.0% |
! | GTAGATTGTGTTTGTTAATG+GGG | - | chr7_2:82533771-82533790 | Msa1082420:intron | 30.0% |
! | AGGAGCTTTTCTTTGATTAT+GGG | - | chr7_2:82533839-82533858 | Msa1082420:intron | 30.0% |
! | TCAAAGGCGTGTTTAATGTT+TGG | - | chr7_2:82527940-82527959 | Msa1082420:CDS | 35.0% |
ATATGTTGATGTCGAGATAC+AGG | + | chr7_2:82527966-82527985 | None:intergenic | 35.0% | |
AATAGGAATAGAAATTGGGC+GGG | - | chr7_2:82528184-82528203 | Msa1082420:intron | 35.0% | |
AATCTATCCAATCTACGACA+AGG | - | chr7_2:82528259-82528278 | Msa1082420:intron | 35.0% | |
AATCTCATCCCCGTATATAA+TGG | - | chr7_2:82528293-82528312 | Msa1082420:intron | 35.0% | |
ATCTCATCCCCGTATATAAT+GGG | - | chr7_2:82528294-82528313 | Msa1082420:intron | 35.0% | |
ACTTGAACCCATTATATACG+GGG | + | chr7_2:82528304-82528323 | None:intergenic | 35.0% | |
ATCACTAAATAGATGGGGAA+GGG | + | chr7_2:82528335-82528354 | None:intergenic | 35.0% | |
TATCACTAAATAGATGGGGA+AGG | + | chr7_2:82528336-82528355 | None:intergenic | 35.0% | |
GTATTTGTCAATTGCAAACC+AGG | - | chr7_2:82528510-82528529 | Msa1082420:intron | 35.0% | |
ATTTCAAAATACAGACACCG+AGG | + | chr7_2:82528672-82528691 | None:intergenic | 35.0% | |
!!! | CGGTGTCTGTATTTTGAAAT+CGG | - | chr7_2:82528672-82528691 | Msa1082420:CDS | 35.0% |
TTCAAACTCATATTCCACCT+CGG | - | chr7_2:82528701-82528720 | Msa1082420:CDS | 35.0% | |
!! | TAATTTGTTGCTTGCACGAA+AGG | - | chr7_2:82528801-82528820 | Msa1082420:intron | 35.0% |
!! | AATTTGTTGCTTGCACGAAA+GGG | - | chr7_2:82528802-82528821 | Msa1082420:intron | 35.0% |
TATGGATAGGAAAAACATGG+AGG | - | chr7_2:82528883-82528902 | Msa1082420:CDS | 35.0% | |
ATGGATAGGAAAAACATGGA+GGG | - | chr7_2:82528884-82528903 | Msa1082420:intron | 35.0% | |
CCGAATTGAACTCACTTTAA+TGG | + | chr7_2:82528989-82529008 | None:intergenic | 35.0% | |
TGTCAAAGTTGAGAACAAAG+TGG | - | chr7_2:82529196-82529215 | Msa1082420:intron | 35.0% | |
TTGAGAACAAAGTGGCAATT+AGG | - | chr7_2:82529204-82529223 | Msa1082420:intron | 35.0% | |
TGAGAACAAAGTGGCAATTA+GGG | - | chr7_2:82529205-82529224 | Msa1082420:intron | 35.0% | |
GCTTGCTTATAGAAATATGC+AGG | + | chr7_2:82529355-82529374 | None:intergenic | 35.0% | |
AGGAAAAGCTTCAGAAGAAT+AGG | - | chr7_2:82529404-82529423 | Msa1082420:intron | 35.0% | |
GGAAAAGCTTCAGAAGAATA+GGG | - | chr7_2:82529405-82529424 | Msa1082420:intron | 35.0% | |
TCTTCAAAGTCAACTTTCCA+AGG | - | chr7_2:82529432-82529451 | Msa1082420:intron | 35.0% | |
TGATATTACTAACATGGCCT+TGG | + | chr7_2:82529452-82529471 | None:intergenic | 35.0% | |
GAAAGAATATTTCCTCCACT+TGG | + | chr7_2:82529490-82529509 | None:intergenic | 35.0% | |
TTGGGACTATAGAACTTACA+CGG | + | chr7_2:82529532-82529551 | None:intergenic | 35.0% | |
!!! | TTCTCACAGGTTTTTTGCTA+CGG | + | chr7_2:82529591-82529610 | None:intergenic | 35.0% |
!! | AAAAACCTGTGAGAAGTATC+AGG | - | chr7_2:82529596-82529615 | Msa1082420:intron | 35.0% |
TGATGAACATGGTTTAACTG+AGG | - | chr7_2:82530301-82530320 | Msa1082420:intron | 35.0% | |
!! | GGAAGTGTTGAGTATTGTTA+AGG | - | chr7_2:82530322-82530341 | Msa1082420:intron | 35.0% |
CATTACCTGAATTTCTGAAC+TGG | + | chr7_2:82530363-82530382 | None:intergenic | 35.0% | |
! | GAGCAGCTAATTTTATGTCA+TGG | - | chr7_2:82530484-82530503 | Msa1082420:intron | 35.0% |
! | CTCTACGATCTTCATCATTT+TGG | + | chr7_2:82530566-82530585 | None:intergenic | 35.0% |
ATCTTTGATTGTCCTTTGCA+CGG | - | chr7_2:82530790-82530809 | Msa1082420:CDS | 35.0% | |
AAGAAACATGGTTGCTTACT+GGG | + | chr7_2:82530837-82530856 | None:intergenic | 35.0% | |
TTGTATGAGGGGCTTAAATT+TGG | - | chr7_2:82531020-82531039 | Msa1082420:intron | 35.0% | |
!! | TCTTTCGGATTGGAAACTTT+TGG | - | chr7_2:82531137-82531156 | Msa1082420:CDS | 35.0% |
TTTAGTAAACTATTGGGGGA+TGG | - | chr7_2:82531615-82531634 | Msa1082420:intron | 35.0% | |
TTAGTAAACTATTGGGGGAT+GGG | - | chr7_2:82531616-82531635 | Msa1082420:intron | 35.0% | |
TCTGCAAAGTCATATGACTT+TGG | - | chr7_2:82531703-82531722 | Msa1082420:intron | 35.0% | |
TATACACCTTGTGAATGTGA+GGG | - | chr7_2:82531974-82531993 | Msa1082420:intron | 35.0% | |
! | CTTGCTGTGAAAAATATTGC+GGG | - | chr7_2:82532035-82532054 | Msa1082420:intron | 35.0% |
!! | CTCTGTAAAAATCGATTTGG+AGG | - | chr7_2:82532152-82532171 | Msa1082420:CDS | 35.0% |
CAACAATTTCGACATACATC+AGG | + | chr7_2:82532248-82532267 | None:intergenic | 35.0% | |
CTGATGTATGTCGAAATTGT+TGG | - | chr7_2:82532246-82532265 | Msa1082420:CDS | 35.0% | |
TATGTCGAAATTGTTGGGTT+AGG | - | chr7_2:82532252-82532271 | Msa1082420:CDS | 35.0% | |
! | ATTATTTTCTCGGGTAAAGG+GGG | - | chr7_2:82532317-82532336 | Msa1082420:CDS | 35.0% |
AAGTACAAGGAAAACTCTTC+CGG | + | chr7_2:82532392-82532411 | None:intergenic | 35.0% | |
AACACTGCATGTGATTGAAT+AGG | - | chr7_2:82532457-82532476 | Msa1082420:intron | 35.0% | |
! | TGGCATTTTGTCAATAGTTG+TGG | - | chr7_2:82532663-82532682 | Msa1082420:intron | 35.0% |
TTTGTCAATAGTTGTGGAGA+TGG | - | chr7_2:82532669-82532688 | Msa1082420:intron | 35.0% | |
!!! | GATTTTTTAGGAGAGTACAC+TGG | - | chr7_2:82533006-82533025 | Msa1082420:intron | 35.0% |
GCATCAAAAGCTAATTGCTA+TGG | - | chr7_2:82533363-82533382 | Msa1082420:intron | 35.0% | |
TAGTTTCACTTGGTAAGTAG+TGG | - | chr7_2:82533535-82533554 | Msa1082420:intron | 35.0% | |
TCGAGTAGGAATATTTGCAA+AGG | - | chr7_2:82533798-82533817 | Msa1082420:intron | 35.0% | |
! | GAGGAGCTTTTCTTTGATTA+TGG | - | chr7_2:82533838-82533857 | Msa1082420:intron | 35.0% |
CTTCATAAACTTCTGGATGA+TGG | - | chr7_2:82533889-82533908 | Msa1082420:intron | 35.0% | |
! | GATGATCCAACATTTTCTCA+AGG | - | chr7_2:82533925-82533944 | Msa1082420:intron | 35.0% |
! | GCTTTTCCTTGAGAAAATGT+TGG | + | chr7_2:82533934-82533953 | None:intergenic | 35.0% |
ACACTGACACTTCTCATCAA+AGG | - | chr7_2:82527924-82527943 | Msa1082420:CDS | 40.0% | |
TTCTCATCCTTGTCGTAGAT+TGG | + | chr7_2:82528269-82528288 | None:intergenic | 40.0% | |
! | TTTGGGGAAAAGTTTGGGTT+CGG | + | chr7_2:82528411-82528430 | None:intergenic | 40.0% |
GTAGGTTTGGGGAAAAGTTT+GGG | + | chr7_2:82528416-82528435 | None:intergenic | 40.0% | |
AGTAGGTTTGGGGAAAAGTT+TGG | + | chr7_2:82528417-82528436 | None:intergenic | 40.0% | |
ATTAGAGACGGAATCGAGTA+CGG | - | chr7_2:82528625-82528644 | Msa1082420:intron | 40.0% | |
AATATCTCTATTACCCGCCT+CGG | - | chr7_2:82528652-82528671 | Msa1082420:CDS | 40.0% | |
! | ATTTGTTGCTTGCACGAAAG+GGG | - | chr7_2:82528803-82528822 | Msa1082420:intron | 40.0% |
TGGATAGGAAAAACATGGAG+GGG | - | chr7_2:82528885-82528904 | Msa1082420:intron | 40.0% | |
! | TGGATTCAGCTCGTTCATTT+TGG | + | chr7_2:82528969-82528988 | None:intergenic | 40.0% |
!!! | TTCTTCTGAAGCTTTTCCTG+AGG | + | chr7_2:82529403-82529422 | None:intergenic | 40.0% |
AATGAATCACTACCAAGTGG+AGG | - | chr7_2:82529475-82529494 | Msa1082420:intron | 40.0% | |
!! | TGATGATCGGGTTGATGATT+GGG | + | chr7_2:82529550-82529569 | None:intergenic | 40.0% |
!! | TTGATGATCGGGTTGATGAT+TGG | + | chr7_2:82529551-82529570 | None:intergenic | 40.0% |
! | TCAACCCGATCATCAAGTTT+TGG | - | chr7_2:82529555-82529574 | Msa1082420:CDS | 40.0% |
! | CAACCCGATCATCAAGTTTT+GGG | - | chr7_2:82529556-82529575 | Msa1082420:CDS | 40.0% |
! | TCTCCCAAAACTTGATGATC+GGG | + | chr7_2:82529562-82529581 | None:intergenic | 40.0% |
! | CTCTCCCAAAACTTGATGAT+CGG | + | chr7_2:82529563-82529582 | None:intergenic | 40.0% |
TGTATCCAAGACGTATATGG+AGG | + | chr7_2:82529643-82529662 | None:intergenic | 40.0% | |
! | AGGGTGAAGACCGATTTATT+AGG | - | chr7_2:82529984-82530003 | Msa1082420:intron | 40.0% |
AGGACGGTATTTGATGAACA+TGG | - | chr7_2:82530290-82530309 | Msa1082420:intron | 40.0% | |
ATTGTTAAGGATGTCATCGG+AGG | - | chr7_2:82530335-82530354 | Msa1082420:CDS | 40.0% | |
AGGTACCAGTTCAGAAATTC+AGG | - | chr7_2:82530355-82530374 | Msa1082420:CDS | 40.0% | |
! | TTTTTACTGTCGTCGTTGCA+TGG | - | chr7_2:82530653-82530672 | Msa1082420:CDS | 40.0% |
!! | TTTTGAGAACAACCGTGCAA+AGG | + | chr7_2:82530805-82530824 | None:intergenic | 40.0% |
GAAGAAACATGGTTGCTTAC+TGG | + | chr7_2:82530838-82530857 | None:intergenic | 40.0% | |
AGTTCGAAAAGCAACCAGTT+TGG | - | chr7_2:82530923-82530942 | Msa1082420:CDS | 40.0% | |
CACTTGTGTGACTCAATAGA+AGG | - | chr7_2:82531090-82531109 | Msa1082420:CDS | 40.0% | |
AGTCTACTACTCTTTCGGAT+TGG | - | chr7_2:82531127-82531146 | Msa1082420:CDS | 40.0% | |
ATGGTTAGAGCTTAAGTGTG+AGG | + | chr7_2:82531232-82531251 | None:intergenic | 40.0% | |
! | TGATGTTCCATTTTCGTCCA+TGG | + | chr7_2:82531388-82531407 | None:intergenic | 40.0% |
GAGAGAGAAAGTCTCTTTGA+CGG | + | chr7_2:82531678-82531697 | None:intergenic | 40.0% | |
CTTGTGGACTTCCATCTAAA+TGG | - | chr7_2:82531906-82531925 | Msa1082420:intron | 40.0% | |
GTATACACCTTGTGAATGTG+AGG | - | chr7_2:82531973-82531992 | Msa1082420:intron | 40.0% | |
CGGCCACAAAATAATAGAGA+GGG | + | chr7_2:82532372-82532391 | None:intergenic | 40.0% | |
!! | CCTCTCTATTATTTTGTGGC+CGG | - | chr7_2:82532370-82532389 | Msa1082420:intron | 40.0% |
TAGTTGTGGAGATGGTAACT+TGG | - | chr7_2:82532677-82532696 | Msa1082420:intron | 40.0% | |
AGTTGTGGAGATGGTAACTT+GGG | - | chr7_2:82532678-82532697 | Msa1082420:intron | 40.0% | |
TTTGTCAGATTCTTTGGGCA+AGG | - | chr7_2:82532844-82532863 | Msa1082420:intron | 40.0% | |
CATATAGAAGCTGATAAGCG+TGG | - | chr7_2:82533042-82533061 | Msa1082420:intron | 40.0% | |
! | TGTCTTGATGCTTTTCGCAA+AGG | - | chr7_2:82533315-82533334 | Msa1082420:intron | 40.0% |
! | GTCTTGATGCTTTTCGCAAA+GGG | - | chr7_2:82533316-82533335 | Msa1082420:intron | 40.0% |
! | GTGGACAAGTTAGTTTCACT+TGG | - | chr7_2:82533525-82533544 | Msa1082420:intron | 40.0% |
AGAACGTAACAGAGAGAATG+TGG | + | chr7_2:82533655-82533674 | None:intergenic | 40.0% | |
CAAAGGAACACATTGAAGCT+GGG | - | chr7_2:82533815-82533834 | Msa1082420:intron | 40.0% | |
AAAGGAACACATTGAAGCTG+GGG | - | chr7_2:82533816-82533835 | Msa1082420:intron | 40.0% | |
AGAAGTTTATGAAGCCATGG+TGG | + | chr7_2:82533883-82533902 | None:intergenic | 40.0% | |
ACCATGGCTTCATAAACTTC+TGG | - | chr7_2:82533882-82533901 | Msa1082420:intron | 40.0% | |
TCCAGAAGTTTATGAAGCCA+TGG | + | chr7_2:82533886-82533905 | None:intergenic | 40.0% | |
TGTTGGATCATCATCTTCCT+TGG | + | chr7_2:82533917-82533936 | None:intergenic | 40.0% | |
TGTCAGTGTCAGTGCTACAA+AGG | + | chr7_2:82527913-82527932 | None:intergenic | 45.0% | |
AATAGAAATTGGGCGGGACA+GGG | - | chr7_2:82528190-82528209 | Msa1082420:intron | 45.0% | |
GTATATGAGATCCAGGGACA+GGG | + | chr7_2:82528230-82528249 | None:intergenic | 45.0% | |
AGTATATGAGATCCAGGGAC+AGG | + | chr7_2:82528231-82528250 | None:intergenic | 45.0% | |
TAAATAGATGGGGAAGGGAC+GGG | + | chr7_2:82528330-82528349 | None:intergenic | 45.0% | |
CTAAATAGATGGGGAAGGGA+CGG | + | chr7_2:82528331-82528350 | None:intergenic | 45.0% | |
! | TTGGGGAAAAGTTTGGGTTC+GGG | + | chr7_2:82528410-82528429 | None:intergenic | 45.0% |
GAGGCGGGTAATAGAGATAT+TGG | + | chr7_2:82528653-82528672 | None:intergenic | 45.0% | |
TCAAAATACAGACACCGAGG+CGG | + | chr7_2:82528669-82528688 | None:intergenic | 45.0% | |
TAGTACTCGCCCCTAATGAA+GGG | + | chr7_2:82528742-82528761 | None:intergenic | 45.0% | |
GGATAGGAAAAACATGGAGG+GGG | - | chr7_2:82528886-82528905 | Msa1082420:intron | 45.0% | |
CAAAGTGGCAATTAGGGTAC+TGG | - | chr7_2:82529211-82529230 | Msa1082420:intron | 45.0% | |
GGACTATAGAACTTACACGG+TGG | + | chr7_2:82529529-82529548 | None:intergenic | 45.0% | |
!!! | CGATCATCAAGTTTTGGGAG+AGG | - | chr7_2:82529561-82529580 | Msa1082420:CDS | 45.0% |
GGTTACCTCCATATACGTCT+TGG | - | chr7_2:82529635-82529654 | Msa1082420:intron | 45.0% | |
CGTCTTGGATACATTTAGCC+AGG | - | chr7_2:82529650-82529669 | Msa1082420:intron | 45.0% | |
TGAAGAGTCAAACGAGCACA+AGG | - | chr7_2:82529940-82529959 | Msa1082420:intron | 45.0% | |
TCATCACCACATGGTTCTCT+GGG | + | chr7_2:82530964-82530983 | None:intergenic | 45.0% | |
AGGTAACAGTCATCACCACA+TGG | + | chr7_2:82530973-82530992 | None:intergenic | 45.0% | |
CTCAATAGAAGGACAAGCTG+AGG | - | chr7_2:82531101-82531120 | Msa1082420:CDS | 45.0% | |
AATAGAAGGACAAGCTGAGG+AGG | - | chr7_2:82531104-82531123 | Msa1082420:CDS | 45.0% | |
GGAGGAGTCTACTACTCTTT+CGG | - | chr7_2:82531122-82531141 | Msa1082420:CDS | 45.0% | |
! | TTTTCGTCCATGGATCCATG+TGG | + | chr7_2:82531378-82531397 | None:intergenic | 45.0% |
CATGGATCCATGGACGAAAA+TGG | - | chr7_2:82531378-82531397 | Msa1082420:CDS | 45.0% | |
TAAACTATTGGGGGATGGGA+TGG | - | chr7_2:82531620-82531639 | Msa1082420:intron | 45.0% | |
AAACTATTGGGGGATGGGAT+GGG | - | chr7_2:82531621-82531640 | Msa1082420:intron | 45.0% | |
TTTGACGGTGGTTTGAGGAT+GGG | + | chr7_2:82531663-82531682 | None:intergenic | 45.0% | |
AGAGAAAGTCTCTTTGACGG+TGG | + | chr7_2:82531675-82531694 | None:intergenic | 45.0% | |
AGGACAATGAGATGACATCG+AGG | - | chr7_2:82531828-82531847 | Msa1082420:CDS | 45.0% | |
ATGAGATGACATCGAGGTCA+AGG | - | chr7_2:82531834-82531853 | Msa1082420:CDS | 45.0% | |
ACATGGACATTGCTTTCCAC+AGG | + | chr7_2:82532002-82532021 | None:intergenic | 45.0% | |
!! | ACAGAGCTTTGAACACCTGA+AGG | + | chr7_2:82532138-82532157 | None:intergenic | 45.0% |
TCTCTCGAAGCTGCAAAACA+TGG | + | chr7_2:82532218-82532237 | None:intergenic | 45.0% | |
CCGGCCACAAAATAATAGAG+AGG | + | chr7_2:82532373-82532392 | None:intergenic | 45.0% | |
AAGGTCTGATGTTGCTGGAT+GGG | - | chr7_2:82532863-82532882 | Msa1082420:intron | 45.0% | |
TGGATGGGGAGCTTTCTTAA+AGG | - | chr7_2:82532878-82532897 | Msa1082420:intron | 45.0% | |
GTTAATGGGGATCATCGAGT+AGG | - | chr7_2:82533784-82533803 | Msa1082420:intron | 45.0% | |
GCAAAGGAACACATTGAAGC+TGG | - | chr7_2:82533814-82533833 | Msa1082420:intron | 45.0% | |
ACGAAAATAGTCGACCACCA+TGG | - | chr7_2:82533866-82533885 | Msa1082420:intron | 45.0% | |
! | ACTTCTGGATGATGGTTCCA+AGG | - | chr7_2:82533897-82533916 | Msa1082420:intron | 45.0% |
!!! | TTAATTAATAATTAATTTGA+TGG | - | chr7_2:82530890-82530909 | Msa1082420:intron | 5.0% |
GAATAGAAATTGGGCGGGAC+AGG | - | chr7_2:82528189-82528208 | Msa1082420:intron | 50.0% | |
! | TTCGGGGCAAGTTCGAGTTT+GGG | + | chr7_2:82528393-82528412 | None:intergenic | 50.0% |
! | TGGGGAAAAGTTTGGGTTCG+GGG | + | chr7_2:82528409-82528428 | None:intergenic | 50.0% |
CAAAATACAGACACCGAGGC+GGG | + | chr7_2:82528668-82528687 | None:intergenic | 50.0% | |
TATTCCACCTCGGTCAAAGC+AGG | - | chr7_2:82528711-82528730 | Msa1082420:CDS | 50.0% | |
ATTCCACCTCGGTCAAAGCA+GGG | - | chr7_2:82528712-82528731 | Msa1082420:CDS | 50.0% | |
AGCAGGGGAAACCCTTCATT+AGG | - | chr7_2:82528728-82528747 | Msa1082420:CDS | 50.0% | |
GCAGGGGAAACCCTTCATTA+GGG | - | chr7_2:82528729-82528748 | Msa1082420:CDS | 50.0% | |
CAGGGGAAACCCTTCATTAG+GGG | - | chr7_2:82528730-82528749 | Msa1082420:CDS | 50.0% | |
CTAGTACTCGCCCCTAATGA+AGG | + | chr7_2:82528743-82528762 | None:intergenic | 50.0% | |
GGCATCCTGATACTTCTCAC+AGG | + | chr7_2:82529604-82529623 | None:intergenic | 50.0% | |
TCAGGATGCCAAGCATCAAC+AGG | - | chr7_2:82529614-82529633 | Msa1082420:intron | 50.0% | |
GGAGGTAACCTGTTGATGCT+TGG | + | chr7_2:82529625-82529644 | None:intergenic | 50.0% | |
! | CCTTCAGGTTCTTGCCAAAC+TGG | + | chr7_2:82530940-82530959 | None:intergenic | 50.0% |
CCAGTTTGGCAAGAACCTGA+AGG | - | chr7_2:82530937-82530956 | Msa1082420:CDS | 50.0% | |
GTCATCACCACATGGTTCTC+TGG | + | chr7_2:82530965-82530984 | None:intergenic | 50.0% | |
GCTGAAGAGTCAATGCCACA+TGG | - | chr7_2:82531360-82531379 | Msa1082420:intron | 50.0% | |
GTCAATGCCACATGGATCCA+TGG | - | chr7_2:82531368-82531387 | Msa1082420:intron | 50.0% | |
AACTATTGGGGGATGGGATG+GGG | - | chr7_2:82531622-82531641 | Msa1082420:intron | 50.0% | |
TTGAGGATGGGGATCTTACG+TGG | + | chr7_2:82531651-82531670 | None:intergenic | 50.0% | |
TTGACGGTGGTTTGAGGATG+GGG | + | chr7_2:82531662-82531681 | None:intergenic | 50.0% | |
CTTTGACGGTGGTTTGAGGA+TGG | + | chr7_2:82531664-82531683 | None:intergenic | 50.0% | |
GTCTCTTTGACGGTGGTTTG+AGG | + | chr7_2:82531668-82531687 | None:intergenic | 50.0% | |
CAAGGTCTGATGTTGCTGGA+TGG | - | chr7_2:82532862-82532881 | Msa1082420:intron | 50.0% | |
AGGTCTGATGTTGCTGGATG+GGG | - | chr7_2:82532864-82532883 | Msa1082420:intron | 50.0% | |
!! | TCAGCGAGAGCACTGTTTCT+TGG | + | chr7_2:82533956-82533975 | None:intergenic | 50.0% |
GGTCTCGGATGCTACAAGCT+CGG | - | chr7_2:82527781-82527800 | Msa1082420:CDS | 55.0% | |
! | GGCAAGTTCGAGTTTGGGGT+TGG | + | chr7_2:82528388-82528407 | None:intergenic | 55.0% |
! | TCGGGGCAAGTTCGAGTTTG+GGG | + | chr7_2:82528392-82528411 | None:intergenic | 55.0% |
! | GTTCGGGGCAAGTTCGAGTT+TGG | + | chr7_2:82528394-82528413 | None:intergenic | 55.0% |
TTCCACCTCGGTCAAAGCAG+GGG | - | chr7_2:82528713-82528732 | Msa1082420:CDS | 55.0% | |
!! | CATGGTTCTCTGGGACCTTC+AGG | + | chr7_2:82530955-82530974 | None:intergenic | 55.0% |
GAAGGTCCCAGAGAACCATG+TGG | - | chr7_2:82530955-82530974 | Msa1082420:intron | 55.0% | |
CAGGCTCCCTCACATTCACA+AGG | + | chr7_2:82531983-82532002 | None:intergenic | 55.0% | |
TGTGAATGTGAGGGAGCCTG+TGG | - | chr7_2:82531983-82532002 | Msa1082420:intron | 55.0% | |
TTGGGAGAGTCGTCTCATCG+TGG | - | chr7_2:82532696-82532715 | Msa1082420:intron | 55.0% | |
AGAGTCGTCTCATCGTGGAG+AGG | - | chr7_2:82532701-82532720 | Msa1082420:intron | 55.0% | |
TGGGCAAGGTCTGATGTTGC+TGG | - | chr7_2:82532858-82532877 | Msa1082420:intron | 55.0% | |
GGAACACATTGAAGCTGGGG+AGG | - | chr7_2:82533819-82533838 | Msa1082420:intron | 55.0% | |
AAATTGGGCGGGACAGGGAC+AGG | - | chr7_2:82528195-82528214 | Msa1082420:intron | 60.0% | |
GGTTTCAGCTTCCCTGTCCC+TGG | - | chr7_2:82528216-82528235 | Msa1082420:intron | 60.0% | |
TTCCCCTGCTTTGACCGAGG+TGG | + | chr7_2:82528718-82528737 | None:intergenic | 60.0% | |
GGTTTCCCCTGCTTTGACCG+AGG | + | chr7_2:82528721-82528740 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 82527779 | 82533975 | 82527779 | ID=Msa1082420;Name=Msa1082420 |
chr7_2 | mRNA | 82527779 | 82533975 | 82527779 | ID=Msa1082420-mRNA-1;Parent=Msa1082420;Name=Msa1082420-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.53|0.31|0.93|1|1|16|0|718 |
chr7_2 | exon | 82533937 | 82533975 | 82533937 | ID=Msa1082420-mRNA-1:exon:21422;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82532761 | 82532862 | 82532761 | ID=Msa1082420-mRNA-1:exon:21421;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82532083 | 82532348 | 82532083 | ID=Msa1082420-mRNA-1:exon:21420;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82531749 | 82531910 | 82531749 | ID=Msa1082420-mRNA-1:exon:21419;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82531378 | 82531462 | 82531378 | ID=Msa1082420-mRNA-1:exon:21418;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82531080 | 82531220 | 82531080 | ID=Msa1082420-mRNA-1:exon:21417;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82530917 | 82530964 | 82530917 | ID=Msa1082420-mRNA-1:exon:21416;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82530549 | 82530829 | 82530549 | ID=Msa1082420-mRNA-1:exon:21415;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82530332 | 82530461 | 82530332 | ID=Msa1082420-mRNA-1:exon:21414;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82529698 | 82529924 | 82529698 | ID=Msa1082420-mRNA-1:exon:21413;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82529481 | 82529612 | 82529481 | ID=Msa1082420-mRNA-1:exon:21412;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82528987 | 82529074 | 82528987 | ID=Msa1082420-mRNA-1:exon:21411;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82528855 | 82528902 | 82528855 | ID=Msa1082420-mRNA-1:exon:21410;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82528638 | 82528766 | 82528638 | ID=Msa1082420-mRNA-1:exon:21409;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82528365 | 82528442 | 82528365 | ID=Msa1082420-mRNA-1:exon:21408;Parent=Msa1082420-mRNA-1 |
chr7_2 | exon | 82527779 | 82527979 | 82527779 | ID=Msa1082420-mRNA-1:exon:21407;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82533937 | 82533975 | 82533937 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82532761 | 82532862 | 82532761 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82532083 | 82532348 | 82532083 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82531749 | 82531910 | 82531749 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82531378 | 82531462 | 82531378 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82531080 | 82531220 | 82531080 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82530917 | 82530964 | 82530917 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82530549 | 82530829 | 82530549 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82530332 | 82530461 | 82530332 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82529698 | 82529924 | 82529698 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82529481 | 82529612 | 82529481 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82528987 | 82529074 | 82528987 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82528855 | 82528902 | 82528855 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82528638 | 82528766 | 82528638 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82528365 | 82528442 | 82528365 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
chr7_2 | CDS | 82527779 | 82527979 | 82527779 | ID=Msa1082420-mRNA-1:cds;Parent=Msa1082420-mRNA-1 |
Gene Sequence |
Protein sequence |