Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1127210 | XP_039684116.1 | 91.678 | 721 | 52 | 3 | 1 | 718 | 1 | 716 | 0.0 | 1313 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1127210 | sp|Q9ZSM8|EZA1_ARATH | 60.434 | 369 | 134 | 4 | 342 | 703 | 479 | 842 | 3.33e-150 | 461 |
Msa1127210 | sp|Q9ZSM8|EZA1_ARATH | 40.994 | 322 | 169 | 6 | 1 | 309 | 1 | 314 | 8.23e-60 | 219 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1127210 | G7KSU0 | 91.938 | 707 | 49 | 3 | 15 | 718 | 63 | 764 | 0.0 | 1293 |
Gene ID | Type | Classification |
---|---|---|
Msa1127210 | TR | SET |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1041050 | Msa1127210 | 0.923687 | 1.911430e-89 | -8.615850e-47 |
Msa1082420 | Msa1127210 | 0.933645 | 1.368273e-95 | -8.615850e-47 |
Msa1127210 | Msa1165450 | 0.960167 | 2.977501e-118 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1127210 | MtrunA17_Chr7g0270001 | 92.780 | 277 | 17 | 1 | 445 | 718 | 24 | 300 | 0.0 | 533 |
Msa1127210 | MtrunA17_Chr7g0270011 | 75.141 | 354 | 29 | 4 | 65 | 418 | 1 | 295 | 0.0 | 519 |
Msa1127210 | MtrunA17_Chr1g0194631 | 59.036 | 415 | 153 | 7 | 309 | 715 | 351 | 756 | 1.43e-161 | 484 |
Msa1127210 | MtrunA17_Chr1g0194631 | 51.271 | 236 | 108 | 2 | 79 | 309 | 19 | 252 | 5.88e-69 | 240 |
Msa1127210 | MtrunA17_Chr5g0401921 | 57.692 | 364 | 146 | 5 | 356 | 714 | 501 | 861 | 1.22e-133 | 415 |
Msa1127210 | MtrunA17_Chr5g0401921 | 35.354 | 297 | 168 | 3 | 31 | 303 | 42 | 338 | 1.66e-49 | 186 |
Msa1127210 | MtrunA17_Chr7g0235081 | 58.841 | 345 | 133 | 7 | 375 | 714 | 4 | 344 | 5.01e-129 | 386 |
Msa1127210 | MtrunA17_Chr7g0235091 | 45.091 | 275 | 118 | 6 | 115 | 374 | 53 | 309 | 2.62e-68 | 227 |
Msa1127210 | MtrunA17_Chr5g0405161 | 55.440 | 193 | 52 | 4 | 219 | 410 | 12 | 171 | 4.33e-57 | 193 |
Msa1127210 | MtrunA17_Chr5g0405161 | 53.571 | 56 | 26 | 0 | 211 | 266 | 166 | 221 | 5.54e-11 | 63.2 |
Msa1127210 | MtrunA17_Chr2g0297191 | 34.783 | 138 | 87 | 2 | 547 | 682 | 1014 | 1150 | 7.78e-20 | 95.1 |
Msa1127210 | MtrunA17_Chr7g0221611 | 35.537 | 121 | 75 | 2 | 565 | 682 | 904 | 1024 | 2.38e-17 | 87.0 |
Msa1127210 | MtrunA17_Chr1g0201621 | 38.532 | 109 | 65 | 1 | 577 | 683 | 95 | 203 | 3.17e-15 | 79.0 |
Msa1127210 | MtrunA17_Chr8g0347071 | 33.058 | 121 | 79 | 2 | 567 | 685 | 808 | 928 | 3.49e-15 | 79.7 |
Msa1127210 | MtrunA17_Chr1g0147121 | 34.146 | 123 | 77 | 3 | 566 | 685 | 892 | 1013 | 4.51e-15 | 79.3 |
Msa1127210 | MtrunA17_Chr1g0201311 | 38.532 | 109 | 65 | 1 | 577 | 683 | 95 | 203 | 7.14e-15 | 77.8 |
Msa1127210 | MtrunA17_Chr2g0305371 | 31.325 | 166 | 103 | 4 | 520 | 682 | 294 | 451 | 1.07e-14 | 77.4 |
Msa1127210 | MtrunA17_Chr3g0126701 | 32.231 | 121 | 80 | 2 | 567 | 685 | 922 | 1042 | 3.63e-14 | 76.6 |
Msa1127210 | MtrunA17_Chr7g0275611 | 33.871 | 124 | 78 | 3 | 567 | 687 | 823 | 945 | 4.03e-14 | 76.3 |
Msa1127210 | MtrunA17_Chr3g0125251 | 32.576 | 132 | 87 | 1 | 553 | 682 | 1311 | 1442 | 2.17e-13 | 74.3 |
Msa1127210 | MtrunA17_Chr1g0149611 | 29.921 | 127 | 80 | 2 | 572 | 689 | 369 | 495 | 1.28e-12 | 70.9 |
Msa1127210 | MtrunA17_Chr1g0149581 | 28.125 | 128 | 86 | 1 | 562 | 683 | 1517 | 1644 | 1.32e-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1127210 | AT4G02020.1 | 60.434 | 369 | 134 | 4 | 342 | 703 | 479 | 842 | 3.39e-151 | 461 |
Msa1127210 | AT4G02020.1 | 40.994 | 322 | 169 | 6 | 1 | 309 | 1 | 314 | 8.37e-61 | 219 |
Msa1127210 | AT2G23380.2 | 51.422 | 422 | 170 | 6 | 322 | 714 | 258 | 673 | 1.87e-134 | 412 |
Msa1127210 | AT2G23380.2 | 43.182 | 88 | 46 | 2 | 217 | 303 | 7 | 91 | 4.98e-15 | 79.3 |
Msa1127210 | AT2G23380.1 | 51.422 | 422 | 170 | 6 | 322 | 714 | 485 | 900 | 5.38e-133 | 415 |
Msa1127210 | AT2G23380.1 | 35.495 | 293 | 167 | 5 | 27 | 303 | 32 | 318 | 3.06e-45 | 174 |
Msa1127210 | AT1G02580.1 | 38.282 | 687 | 354 | 16 | 27 | 682 | 13 | 660 | 5.12e-132 | 406 |
Msa1127210 | AT4G02020.4 | 60.312 | 320 | 117 | 3 | 342 | 654 | 479 | 795 | 2.21e-129 | 403 |
Msa1127210 | AT4G02020.4 | 40.994 | 322 | 169 | 6 | 1 | 309 | 1 | 314 | 2.90e-61 | 220 |
Msa1127210 | AT4G02020.3 | 57.929 | 309 | 118 | 4 | 342 | 641 | 479 | 784 | 9.73e-114 | 362 |
Msa1127210 | AT4G02020.3 | 40.994 | 322 | 169 | 6 | 1 | 309 | 1 | 314 | 3.18e-61 | 220 |
Msa1127210 | AT4G02020.2 | 57.929 | 309 | 118 | 4 | 342 | 641 | 479 | 784 | 9.73e-114 | 362 |
Msa1127210 | AT4G02020.2 | 40.994 | 322 | 169 | 6 | 1 | 309 | 1 | 314 | 3.18e-61 | 220 |
Msa1127210 | AT1G02580.2 | 35.324 | 586 | 309 | 16 | 27 | 581 | 13 | 559 | 1.47e-87 | 286 |
Msa1127210 | AT5G42400.7 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1127210 | AT5G42400.2 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1127210 | AT5G42400.8 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1127210 | AT5G42400.5 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1127210 | AT5G42400.4 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1127210 | AT5G42400.1 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1127210 | AT5G42400.3 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1127210 | AT5G42400.6 | 36.567 | 134 | 82 | 2 | 551 | 682 | 1235 | 1367 | 6.90e-21 | 99.0 |
Msa1127210 | AT2G31650.1 | 36.364 | 121 | 74 | 2 | 565 | 682 | 897 | 1017 | 2.07e-18 | 90.9 |
Msa1127210 | AT4G30860.1 | 36.774 | 155 | 86 | 4 | 531 | 682 | 299 | 444 | 3.13e-17 | 85.9 |
Msa1127210 | AT1G05830.2 | 33.884 | 121 | 77 | 2 | 565 | 682 | 918 | 1038 | 2.64e-16 | 84.0 |
Msa1127210 | AT1G05830.4 | 33.884 | 121 | 77 | 2 | 565 | 682 | 918 | 1038 | 2.64e-16 | 84.0 |
Msa1127210 | AT1G05830.1 | 33.884 | 121 | 77 | 2 | 565 | 682 | 918 | 1038 | 2.64e-16 | 84.0 |
Msa1127210 | AT1G05830.3 | 33.884 | 121 | 77 | 2 | 565 | 682 | 918 | 1038 | 2.64e-16 | 84.0 |
Msa1127210 | AT1G76710.4 | 40.367 | 109 | 63 | 1 | 577 | 683 | 100 | 208 | 2.67e-16 | 82.8 |
Msa1127210 | AT1G76710.3 | 40.367 | 109 | 63 | 1 | 577 | 683 | 100 | 208 | 2.99e-16 | 82.8 |
Msa1127210 | AT1G76710.2 | 40.367 | 109 | 63 | 1 | 577 | 683 | 100 | 208 | 3.13e-16 | 82.8 |
Msa1127210 | AT1G76710.1 | 40.367 | 109 | 63 | 1 | 577 | 683 | 100 | 208 | 3.13e-16 | 82.8 |
Msa1127210 | AT4G27910.1 | 33.884 | 121 | 78 | 2 | 567 | 685 | 886 | 1006 | 7.50e-15 | 79.3 |
Msa1127210 | AT5G53430.1 | 33.607 | 122 | 79 | 2 | 566 | 685 | 901 | 1022 | 1.20e-14 | 78.6 |
Msa1127210 | AT1G77300.1 | 36.090 | 133 | 81 | 2 | 553 | 682 | 1013 | 1144 | 2.04e-13 | 74.7 |
Msa1127210 | AT1G77300.2 | 36.090 | 133 | 81 | 2 | 553 | 682 | 1013 | 1144 | 2.44e-13 | 74.7 |
Msa1127210 | AT3G61740.2 | 30.000 | 120 | 81 | 2 | 567 | 683 | 840 | 959 | 1.31e-12 | 72.0 |
Msa1127210 | AT3G61740.1 | 30.000 | 120 | 81 | 2 | 567 | 683 | 876 | 995 | 2.01e-12 | 71.2 |
Msa1127210 | AT3G59960.3 | 31.967 | 122 | 81 | 2 | 563 | 682 | 108 | 229 | 5.14e-12 | 67.8 |
Msa1127210 | AT3G59960.2 | 31.967 | 122 | 81 | 2 | 563 | 682 | 108 | 229 | 5.14e-12 | 67.8 |
Msa1127210 | AT3G59960.4 | 31.967 | 122 | 81 | 2 | 563 | 682 | 108 | 229 | 5.14e-12 | 67.8 |
Msa1127210 | AT3G59960.1 | 31.967 | 122 | 81 | 2 | 563 | 682 | 108 | 229 | 8.31e-12 | 67.8 |
Find 116 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGAATTGAACTCACTTTAA+TGG | 0.116068 | 7_3:+78712503 | None:intergenic |
TGTATATTTGTCAGATTCTT+TGG | 0.176923 | 7_3:-78708674 | Msa1127210:intron |
TGGATTCAGCTCGTTCATTT+TGG | 0.198819 | 7_3:+78712523 | None:intergenic |
CTCTACGATCTTCATCATTT+TGG | 0.203520 | 7_3:+78710923 | None:intergenic |
TTGTAGATTGTGTTTGTTAA+TGG | 0.242431 | 7_3:-78707743 | Msa1127210:intron |
TAGAAATGTTTGGGAGAAAT+AGG | 0.261350 | 7_3:-78710303 | Msa1127210:intron |
CCGTATCATTCAAGTTAAAA+AGG | 0.263836 | 7_3:+78708417 | None:intergenic |
TTGTATGAGGGGCTTAAATT+TGG | 0.276488 | 7_3:-78710467 | Msa1127210:CDS |
TCAGCGAGAGCACTGTTTCT+TGG | 0.281828 | 7_3:+78707559 | None:intergenic |
TCAACCCGATCATCAAGTTT+TGG | 0.284315 | 7_3:-78711929 | Msa1127210:CDS |
CCTTCAGGTTCTTGCCAAAC+TGG | 0.285004 | 7_3:+78710550 | None:intergenic |
CATGGATCCATGGACGAAAA+TGG | 0.290421 | 7_3:-78710109 | Msa1127210:CDS |
CATGGTTCTCTGGGACCTTC+AGG | 0.309857 | 7_3:+78710535 | None:intergenic |
TGGATGGGGAGCTTTCTTAA+AGG | 0.310146 | 7_3:-78708634 | Msa1127210:intron |
TCTTTCGGATTGGAAACTTT+TGG | 0.327216 | 7_3:-78710350 | Msa1127210:CDS |
TTGAAGGGAATAGAAATGTT+TGG | 0.329797 | 7_3:-78710313 | Msa1127210:CDS |
CTTGTGGACTTCCATCTAAA+TGG | 0.334827 | 7_3:-78709583 | Msa1127210:CDS |
TGTAGATTGTGTTTGTTAAT+GGG | 0.343535 | 7_3:-78707742 | Msa1127210:intron |
AGGAAAAGCTTCAGAAGAAT+AGG | 0.345098 | 7_3:-78712080 | Msa1127210:CDS |
GTCATCACCACATGGTTCTC+TGG | 0.363244 | 7_3:+78710525 | None:intergenic |
TGGGCAAGGTCTGATGTTGC+TGG | 0.366049 | 7_3:-78708654 | Msa1127210:CDS |
AGGTACCAGTTCAGAAATTC+AGG | 0.366551 | 7_3:-78711131 | Msa1127210:intron |
AAGGTCTGATGTTGCTGGAT+GGG | 0.377084 | 7_3:-78708649 | Msa1127210:CDS |
GTATATTTGTCAGATTCTTT+GGG | 0.380194 | 7_3:-78708673 | Msa1127210:intron |
TGAAGGGAATAGAAATGTTT+GGG | 0.387527 | 7_3:-78710312 | Msa1127210:CDS |
AAATGTATCCAAGACGTATA+TGG | 0.398309 | 7_3:+78711841 | None:intergenic |
TGATATTACTAACATGGCCT+TGG | 0.406456 | 7_3:+78712035 | None:intergenic |
ACCATGGCTTCATAAACTTC+TGG | 0.412370 | 7_3:-78707630 | Msa1127210:CDS |
TTGTGACATCTTTATTATGA+AGG | 0.413196 | 7_3:+78710497 | None:intergenic |
TTTGACGAACAAGATACATT+TGG | 0.417321 | 7_3:-78712559 | Msa1127210:CDS |
TTGATGATCGGGTTGATGAT+TGG | 0.418627 | 7_3:+78711936 | None:intergenic |
CAAGGTCTGATGTTGCTGGA+TGG | 0.418842 | 7_3:-78708650 | Msa1127210:CDS |
TGTTGGATCATCATCTTCCT+TGG | 0.421957 | 7_3:+78707598 | None:intergenic |
GGAGGAGTCTACTACTCTTT+CGG | 0.427997 | 7_3:-78710365 | Msa1127210:CDS |
AGTTCGAAAAGCAACCAGTT+TGG | 0.430460 | 7_3:-78710564 | Msa1127210:CDS |
TCACAATTAGTAATTGTATG+AGG | 0.430536 | 7_3:-78710480 | Msa1127210:CDS |
CTTCATAAACTTCTGGATGA+TGG | 0.434437 | 7_3:-78707623 | Msa1127210:CDS |
GGAAAAGCTTCAGAAGAATA+GGG | 0.434496 | 7_3:-78712079 | Msa1127210:CDS |
AGGTCTGATGTTGCTGGATG+GGG | 0.436683 | 7_3:-78708648 | Msa1127210:CDS |
TCTCCCAAAACTTGATGATC+GGG | 0.437642 | 7_3:+78711925 | None:intergenic |
TATGTCGAAATTGTTGGGTT+AGG | 0.439250 | 7_3:-78709236 | Msa1127210:intron |
TGATGATCGGGTTGATGATT+GGG | 0.450857 | 7_3:+78711937 | None:intergenic |
CTCTCCCAAAACTTGATGAT+CGG | 0.452457 | 7_3:+78711924 | None:intergenic |
CATTACCTGAATTTCTGAAC+TGG | 0.453071 | 7_3:+78711126 | None:intergenic |
GCAAAGGAACACATTGAAGC+TGG | 0.455412 | 7_3:-78707698 | Msa1127210:CDS |
CACTTGTGTGACTCAATAGA+AGG | 0.458241 | 7_3:-78710397 | Msa1127210:CDS |
AAATGTATATTATGATCATC+AGG | 0.462380 | 7_3:-78711598 | Msa1127210:CDS |
CAACAATTTCGACATACATC+AGG | 0.464497 | 7_3:+78709243 | None:intergenic |
AGGGTGAAGACCGATTTATT+AGG | 0.467728 | 7_3:-78711500 | Msa1127210:intron |
AAATATTCTTCAAAATCTTG+TGG | 0.468339 | 7_3:-78709599 | Msa1127210:CDS |
TCAGGATGCCAAGCATCAAC+AGG | 0.472001 | 7_3:-78711870 | Msa1127210:CDS |
GGAAGTGTTGAGTATTGTTA+AGG | 0.491359 | 7_3:-78711164 | Msa1127210:CDS |
AACAGTTTCATCAATGGTCT+CGG | 0.496658 | 7_3:-78713715 | None:intergenic |
ATCTTTGATTGTCCTTTGCA+CGG | 0.496740 | 7_3:-78710697 | Msa1127210:CDS |
GCATCAAAAGCTAATTGCTA+TGG | 0.496913 | 7_3:-78708149 | Msa1127210:CDS |
TTTGTCTATAGTTGTGGAGA+TGG | 0.500177 | 7_3:-78708843 | Msa1127210:intron |
AAAACATGATGCTTCTTGTA+AGG | 0.500417 | 7_3:-78708779 | Msa1127210:CDS |
ATGATCAAAAGTATCTAAAG+AGG | 0.509607 | 7_3:+78710855 | None:intergenic |
CGTCTTGGATACATTTAGCC+AGG | 0.511255 | 7_3:-78711834 | Msa1127210:intron |
AGTCTACTACTCTTTCGGAT+TGG | 0.511550 | 7_3:-78710360 | Msa1127210:CDS |
TTTGTCAGATTCTTTGGGCA+AGG | 0.512971 | 7_3:-78708668 | Msa1127210:intron |
CACAATTAGTAATTGTATGA+GGG | 0.514622 | 7_3:-78710479 | Msa1127210:CDS |
CAAAGGAACACATTGAAGCT+GGG | 0.517669 | 7_3:-78707697 | Msa1127210:CDS |
GTAGATTGTGTTTGTTAATG+GGG | 0.518073 | 7_3:-78707741 | Msa1127210:intron |
CTGATGTATGTCGAAATTGT+TGG | 0.519505 | 7_3:-78709242 | Msa1127210:CDS |
GGCATCCTGATACTTCTCAC+AGG | 0.523294 | 7_3:+78711883 | None:intergenic |
TGATGTATGTCGAAATTGTT+GGG | 0.532358 | 7_3:-78709241 | Msa1127210:CDS |
TCATCACCACATGGTTCTCT+GGG | 0.539476 | 7_3:+78710526 | None:intergenic |
GGTTACCTCCATATACGTCT+TGG | 0.539814 | 7_3:-78711849 | Msa1127210:CDS |
GAAAGAATATTTCCTCCACT+TGG | 0.540932 | 7_3:+78711997 | None:intergenic |
GTCAATGCCACATGGATCCA+TGG | 0.545867 | 7_3:-78710119 | Msa1127210:CDS |
TAGTTGTGGAGATGGTAACT+TGG | 0.550585 | 7_3:-78708835 | Msa1127210:CDS |
ACATGGACATTGCTTTCCAC+AGG | 0.551199 | 7_3:+78709490 | None:intergenic |
AAAAGCTAATTGCTATGGAA+AGG | 0.554769 | 7_3:-78708144 | Msa1127210:intron |
TCTTCAAAGTCAACTTTCCA+AGG | 0.557371 | 7_3:-78712052 | Msa1127210:CDS |
TCTCTCGAAGCTGCAAAACA+TGG | 0.560977 | 7_3:+78709273 | None:intergenic |
TCTTGTAAGGAAACAACAAA+AGG | 0.562281 | 7_3:-78708766 | Msa1127210:intron |
ATGAGATGACATCGAGGTCA+AGG | 0.562748 | 7_3:-78709655 | Msa1127210:CDS |
AGTATTGTTAAGGATGTCAT+CGG | 0.565880 | 7_3:-78711154 | Msa1127210:CDS |
AGAAACAGTGCTCTCGCTGA+TGG | 0.570720 | 7_3:-78707556 | None:intergenic |
AGTTGTGGAGATGGTAACTT+GGG | 0.571243 | 7_3:-78708834 | Msa1127210:CDS |
ACTTCTGGATGATGGTTCCA+AGG | 0.574557 | 7_3:-78707615 | Msa1127210:CDS |
TCCAGAAGTTTATGAAGCCA+TGG | 0.577075 | 7_3:+78707629 | None:intergenic |
GGAGGTAACCTGTTGATGCT+TGG | 0.585377 | 7_3:+78711862 | None:intergenic |
CATATAGAAGCTGATAAGCG+TGG | 0.585855 | 7_3:-78708470 | Msa1127210:CDS |
ACAATTAGTAATTGTATGAG+GGG | 0.586473 | 7_3:-78710478 | Msa1127210:CDS |
AATAGAAGGACAAGCTGAGG+AGG | 0.588743 | 7_3:-78710383 | Msa1127210:CDS |
AGGACGGTATTTGATGAACA+TGG | 0.591105 | 7_3:-78711196 | Msa1127210:CDS |
CAAGAACTATTAAGAAGACA+TGG | 0.596810 | 7_3:+78709473 | None:intergenic |
GTTAATGGGGATCATCGAGT+AGG | 0.597741 | 7_3:-78707728 | Msa1127210:CDS |
AACAATTTCGACATACATCA+GGG | 0.601740 | 7_3:+78709244 | None:intergenic |
TGAAGAGTCAAACGAGCACA+AGG | 0.605193 | 7_3:-78711544 | Msa1127210:CDS |
GTATACACCTTGTGAATGTG+AGG | 0.614412 | 7_3:-78709516 | Msa1127210:CDS |
GGAACACATTGAAGCTGGGG+AGG | 0.615949 | 7_3:-78707693 | Msa1127210:CDS |
TCGAGTAGGAATATTTGCAA+AGG | 0.624767 | 7_3:-78707714 | Msa1127210:CDS |
CTCAATAGAAGGACAAGCTG+AGG | 0.630020 | 7_3:-78710386 | Msa1127210:CDS |
AAAGGAACACATTGAAGCTG+GGG | 0.641785 | 7_3:-78707696 | Msa1127210:CDS |
CCAGTTTGGCAAGAACCTGA+AGG | 0.643958 | 7_3:-78710550 | Msa1127210:CDS |
TGTGAATGTGAGGGAGCCTG+TGG | 0.648105 | 7_3:-78709506 | Msa1127210:CDS |
GCTGAAGAGTCAATGCCACA+TGG | 0.648318 | 7_3:-78710127 | Msa1127210:CDS |
AATGAATCACTACCAAGTGG+AGG | 0.658347 | 7_3:-78712009 | Msa1127210:CDS |
CAGGCTCCCTCACATTCACA+AGG | 0.660511 | 7_3:+78709509 | None:intergenic |
GTATATTATGATCATCAGGA+AGG | 0.661006 | 7_3:-78711594 | Msa1127210:CDS |
TGTATCCAAGACGTATATGG+AGG | 0.666836 | 7_3:+78711844 | None:intergenic |
TGATGAACATGGTTTAACTG+AGG | 0.669808 | 7_3:-78711185 | Msa1127210:CDS |
AGAGTCGTCTCATCGTGGAG+AGG | 0.678757 | 7_3:-78708811 | Msa1127210:CDS |
TATACACCTTGTGAATGTGA+GGG | 0.684335 | 7_3:-78709515 | Msa1127210:CDS |
ATTGTTAAGGATGTCATCGG+AGG | 0.690600 | 7_3:-78711151 | Msa1127210:CDS |
TTGGGAGAGTCGTCTCATCG+TGG | 0.699122 | 7_3:-78708816 | Msa1127210:CDS |
AGGTAACAGTCATCACCACA+TGG | 0.703610 | 7_3:+78710517 | None:intergenic |
ACGAAAATAGTCGACCACCA+TGG | 0.705776 | 7_3:-78707646 | Msa1127210:CDS |
AGAAGTTTATGAAGCCATGG+TGG | 0.706867 | 7_3:+78707632 | None:intergenic |
TTGGGACTATAGAACTTACA+CGG | 0.709896 | 7_3:+78711955 | None:intergenic |
AGGACAATGAGATGACATCG+AGG | 0.791829 | 7_3:-78709661 | Msa1127210:CDS |
GAAGGTCCCAGAGAACCATG+TGG | 0.793045 | 7_3:-78710532 | Msa1127210:CDS |
GGACTATAGAACTTACACGG+TGG | 0.797366 | 7_3:+78711958 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTATTATTTTGTTCCAAAT+TGG | - | chr7_3:78707896-78707915 | Msa1127210:intron | 15.0% |
!! | AATTATATCACTAAATAGAT+GGG | + | chr7_3:78708113-78708132 | None:intergenic | 15.0% |
!! | AAATTATATCACTAAATAGA+TGG | + | chr7_3:78708114-78708133 | None:intergenic | 15.0% |
!! | TTAGAATAATAATAAAATGG+TGG | + | chr7_3:78708227-78708246 | None:intergenic | 15.0% |
!! | GGATTAGAATAATAATAAAA+TGG | + | chr7_3:78708230-78708249 | None:intergenic | 15.0% |
!! | TATTATTATTCTAATCCATT+TGG | - | chr7_3:78708233-78708252 | Msa1127210:intron | 15.0% |
!! | ATTATTATTCTAATCCATTT+GGG | - | chr7_3:78708234-78708253 | Msa1127210:intron | 15.0% |
!! | TAAAAAATATCTCAAAAGTA+AGG | - | chr7_3:78708330-78708349 | Msa1127210:intron | 15.0% |
!! | TACTAATAATACTTATTGTA+TGG | - | chr7_3:78708637-78708656 | Msa1127210:CDS | 15.0% |
!!! | TTATTTTCCATTATAAATTG+AGG | - | chr7_3:78708846-78708865 | Msa1127210:intron | 15.0% |
!!! | TATTTTCCATTATAAATTGA+GGG | - | chr7_3:78708847-78708866 | Msa1127210:intron | 15.0% |
!!! | ATTTTTTGATATTACTAACA+TGG | + | chr7_3:78709235-78709254 | None:intergenic | 15.0% |
!!! | TTTTGATTTACCTAATAAAT+CGG | + | chr7_3:78709774-78709793 | None:intergenic | 15.0% |
!! | TTGTGACTATTTAATATATT+AGG | - | chr7_3:78710045-78710064 | Msa1127210:intron | 15.0% |
!! | ATATAAAAATATCAAGGAAA+AGG | - | chr7_3:78710314-78710333 | Msa1127210:CDS | 15.0% |
!! | AATTAATTATTCATTGATAC+TGG | + | chr7_3:78710661-78710680 | None:intergenic | 15.0% |
!!! | TCAATGAATAATTAATTTGA+TGG | - | chr7_3:78710664-78710683 | Msa1127210:intron | 15.0% |
!!! | TAACCATTTTTCTAATATTT+TGG | - | chr7_3:78711019-78711038 | Msa1127210:intron | 15.0% |
!!! | ATGTTATTTTAGTAAACTAT+TGG | - | chr7_3:78711382-78711401 | Msa1127210:intron | 15.0% |
!!! | TGTTATTTTAGTAAACTATT+GGG | - | chr7_3:78711383-78711402 | Msa1127210:intron | 15.0% |
!!! | ATACTTAATTCAATTTTACA+AGG | + | chr7_3:78712267-78712286 | None:intergenic | 15.0% |
!!! | TAATATAATGCTTTTAACTA+TGG | - | chr7_3:78712392-78712411 | Msa1127210:intron | 15.0% |
!! | ACAAATATACAAATCAATTA+AGG | + | chr7_3:78712578-78712597 | None:intergenic | 15.0% |
!!! | TATCTATTATTTTGTTTTAG+TGG | - | chr7_3:78713255-78713274 | Msa1127210:intron | 15.0% |
!! | TTTGTTTCATCATTTCAAAT+AGG | - | chr7_3:78707947-78707966 | Msa1127210:intron | 20.0% |
!! | TTTCAAATAGGAATAGAAAT+TGG | - | chr7_3:78707959-78707978 | Msa1127210:intron | 20.0% |
!! | TTCAAATAGGAATAGAAATT+GGG | - | chr7_3:78707960-78707979 | Msa1127210:intron | 20.0% |
!! | ATTATATCACTAAATAGATG+GGG | + | chr7_3:78708112-78708131 | None:intergenic | 20.0% |
!!! | AAATGGTGGAAATTAATTTA+TGG | + | chr7_3:78708213-78708232 | None:intergenic | 20.0% |
!!! | ATAATTTTTCACATTAGAGA+CGG | - | chr7_3:78708385-78708404 | Msa1127210:intron | 20.0% |
!! | ATAATACTTATTGTATGGAT+AGG | - | chr7_3:78708642-78708661 | Msa1127210:CDS | 20.0% |
!!! | ATTTTCCATTATAAATTGAG+GGG | - | chr7_3:78708848-78708867 | Msa1127210:intron | 20.0% |
!!! | AGTTAATTAAGTTGTTTTTG+AGG | - | chr7_3:78708903-78708922 | Msa1127210:intron | 20.0% |
!! | AAATGTATATTATGATCATC+AGG | - | chr7_3:78709663-78709682 | Msa1127210:intron | 20.0% |
!!! | ATATGTAATACATATTTTGC+TGG | - | chr7_3:78709936-78709955 | Msa1127210:intron | 20.0% |
!!! | CACAATAAGTATAAACTTTT+CGG | + | chr7_3:78709966-78709985 | None:intergenic | 20.0% |
!! | GACTATTTAATATATTAGGA+CGG | - | chr7_3:78710049-78710068 | Msa1127210:intron | 20.0% |
!! | TCATATTATAGACAACAATA+TGG | + | chr7_3:78710499-78710518 | None:intergenic | 20.0% |
!! | CAATGAAGAAAAAAATGATA+TGG | - | chr7_3:78710824-78710843 | Msa1127210:intron | 20.0% |
!! | GAAAAAGAATTATACTTGAA+GGG | - | chr7_3:78710933-78710952 | Msa1127210:CDS | 20.0% |
!! | AAGCCAAAATATTAGAAAAA+TGG | + | chr7_3:78711025-78711044 | None:intergenic | 20.0% |
!!! | GTTATTTTAGTAAACTATTG+GGG | - | chr7_3:78711384-78711403 | Msa1127210:intron | 20.0% |
!!! | TTATTTTAGTAAACTATTGG+GGG | - | chr7_3:78711385-78711404 | Msa1127210:intron | 20.0% |
!! | AAATATTCTTCAAAATCTTG+TGG | - | chr7_3:78711662-78711681 | Msa1127210:intron | 20.0% |
!!! | AAAAATCATTTTTGTTTGCT+GGG | + | chr7_3:78712742-78712761 | None:intergenic | 20.0% |
!!! | AAAAAATCATTTTTGTTTGC+TGG | + | chr7_3:78712743-78712762 | None:intergenic | 20.0% |
!!! | GCAAACAAAAATGATTTTTT+AGG | - | chr7_3:78712743-78712762 | Msa1127210:intron | 20.0% |
!! | ATTCATAGTATAGGTTAATA+TGG | + | chr7_3:78713033-78713052 | None:intergenic | 20.0% |
!! | ACTGAAAAAATTCATAGTAT+AGG | + | chr7_3:78713042-78713061 | None:intergenic | 20.0% |
!!! | GGTTTTGCTCAATTTATTTT+AGG | - | chr7_3:78707634-78707653 | Msa1127210:CDS | 25.0% |
! | ATAATAATGCACGATTATCT+AGG | + | chr7_3:78707884-78707903 | None:intergenic | 25.0% |
!!! | CATCATTTTTCTATCCAATT+TGG | + | chr7_3:78707913-78707932 | None:intergenic | 25.0% |
! | ATATAAGTATATGAGATCCA+GGG | + | chr7_3:78708008-78708027 | None:intergenic | 25.0% |
! | ATACTTGAACCCATTATATA+CGG | + | chr7_3:78708078-78708097 | None:intergenic | 25.0% |
! | TAATTTATGGTAGTAGGTTT+GGG | + | chr7_3:78708200-78708219 | None:intergenic | 25.0% |
! | TTAATTTATGGTAGTAGGTT+TGG | + | chr7_3:78708201-78708220 | None:intergenic | 25.0% |
! | GGAAATTAATTTATGGTAGT+AGG | + | chr7_3:78708206-78708225 | None:intergenic | 25.0% |
!! | TTTTCCATTATAAATTGAGG+GGG | - | chr7_3:78708849-78708868 | Msa1127210:intron | 25.0% |
!!! | CAGTTCCTCTTAATTTTTTA+TGG | - | chr7_3:78708940-78708959 | Msa1127210:intron | 25.0% |
! | CAAGTCCATAAAAAATTAAG+AGG | + | chr7_3:78708948-78708967 | None:intergenic | 25.0% |
!!! | CTCTTAATTTTTTATGGACT+TGG | - | chr7_3:78708946-78708965 | Msa1127210:intron | 25.0% |
!!! | CTTTTACGTAATTGTTGTTT+TGG | - | chr7_3:78709045-78709064 | Msa1127210:intron | 25.0% |
! | GATAATTAAGATTGACTACA+TGG | + | chr7_3:78709154-78709173 | None:intergenic | 25.0% |
! | AATCTTAATTATCTTTCCTC+AGG | - | chr7_3:78709161-78709180 | Msa1127210:intron | 25.0% |
! | CCTAAAAAATTTCATGTAAG+AGG | + | chr7_3:78709491-78709510 | None:intergenic | 25.0% |
!!! | CCTCTTACATGAAATTTTTT+AGG | - | chr7_3:78709488-78709507 | Msa1127210:CDS | 25.0% |
! | AGATGACACAAATTTAACAT+AGG | + | chr7_3:78709565-78709584 | None:intergenic | 25.0% |
!! | AATAAGTATAAACTTTTCGG+AGG | + | chr7_3:78709963-78709982 | None:intergenic | 25.0% |
! | CAAGATAATATGTTTAGTGA+AGG | + | chr7_3:78710028-78710047 | None:intergenic | 25.0% |
!!! | ATGATCAAAAGTATCTAAAG+AGG | + | chr7_3:78710409-78710428 | None:intergenic | 25.0% |
! | TATTATAGACAACAATATGG+TGG | + | chr7_3:78710496-78710515 | None:intergenic | 25.0% |
! | AAGAAATGAATGAAGAAACA+TGG | + | chr7_3:78710623-78710642 | None:intergenic | 25.0% |
! | TTGTGACATCTTTATTATGA+AGG | + | chr7_3:78710767-78710786 | None:intergenic | 25.0% |
! | TCACAATTAGTAATTGTATG+AGG | - | chr7_3:78710781-78710800 | Msa1127210:intron | 25.0% |
! | CACAATTAGTAATTGTATGA+GGG | - | chr7_3:78710782-78710801 | Msa1127210:intron | 25.0% |
! | ACAATTAGTAATTGTATGAG+GGG | - | chr7_3:78710783-78710802 | Msa1127210:intron | 25.0% |
! | TGAAGAAAAAAATGATATGG+AGG | - | chr7_3:78710827-78710846 | Msa1127210:intron | 25.0% |
! | GGAAAAAGAATTATACTTGA+AGG | - | chr7_3:78710932-78710951 | Msa1127210:CDS | 25.0% |
!!! | ATCGTCAAATTGTTTTTGAA+TGG | - | chr7_3:78711566-78711585 | Msa1127210:CDS | 25.0% |
!!! | TCGTCAAATTGTTTTTGAAT+GGG | - | chr7_3:78711567-78711586 | Msa1127210:CDS | 25.0% |
!! | TTAATTATGTTCCTTTTCGA+TGG | - | chr7_3:78711845-78711864 | Msa1127210:CDS | 25.0% |
!! | ATAATTGTTTTCCATCGAAA+AGG | + | chr7_3:78711859-78711878 | None:intergenic | 25.0% |
! | CCAGAGAAAATAATACATAT+AGG | + | chr7_3:78712084-78712103 | None:intergenic | 25.0% |
!! | CCTATATGTATTATTTTCTC+TGG | - | chr7_3:78712081-78712100 | Msa1127210:CDS | 25.0% |
!! | TGTATTATTTTCTCTGGTAA+AGG | - | chr7_3:78712087-78712106 | Msa1127210:intron | 25.0% |
!! | GTATTATTTTCTCTGGTAAA+GGG | - | chr7_3:78712088-78712107 | Msa1127210:intron | 25.0% |
!! | TATTATTTTCTCTGGTAAAG+GGG | - | chr7_3:78712089-78712108 | Msa1127210:intron | 25.0% |
! | TAGTACTTAATTCAAGTACA+AGG | + | chr7_3:78712178-78712197 | None:intergenic | 25.0% |
!! | AAATAAACACTGCATGTTTT+TGG | - | chr7_3:78712225-78712244 | Msa1127210:intron | 25.0% |
! | TGTATATTTGTCAGATTCTT+TGG | - | chr7_3:78712587-78712606 | Msa1127210:CDS | 25.0% |
! | GTATATTTGTCAGATTCTTT+GGG | - | chr7_3:78712588-78712607 | Msa1127210:CDS | 25.0% |
!!! | AAAATCATTTTTGTTTGCTG+GGG | + | chr7_3:78712741-78712760 | None:intergenic | 25.0% |
!!! | CCTTTTTAACTTGAATGATA+CGG | - | chr7_3:78712844-78712863 | Msa1127210:intron | 25.0% |
!!! | TTGTAGTTTTGAATAACAGA+AGG | + | chr7_3:78713440-78713459 | None:intergenic | 25.0% |
! | ATTGAATTGCAAATAATGTG+TGG | - | chr7_3:78713491-78713510 | Msa1127210:intron | 25.0% |
!! | TTGTAGATTGTGTTTGTTAA+TGG | - | chr7_3:78713518-78713537 | Msa1127210:intron | 25.0% |
!! | TGTAGATTGTGTTTGTTAAT+GGG | - | chr7_3:78713519-78713538 | Msa1127210:intron | 25.0% |
CAGATAAAGTATGAGATTGA+TGG | + | chr7_3:78707615-78707634 | None:intergenic | 30.0% | |
CATCAATCTCATACTTTATC+TGG | - | chr7_3:78707613-78707632 | Msa1127210:CDS | 30.0% | |
TATCATCAATTCTTCACACA+TGG | - | chr7_3:78707837-78707856 | Msa1127210:intron | 30.0% | |
AAATAGGAATAGAAATTGGG+CGG | - | chr7_3:78707963-78707982 | Msa1127210:intron | 30.0% | |
CATATAAGTATATGAGATCC+AGG | + | chr7_3:78708009-78708028 | None:intergenic | 30.0% | |
TACTTGAACCCATTATATAC+GGG | + | chr7_3:78708077-78708096 | None:intergenic | 30.0% | |
AATTTATGGTAGTAGGTTTG+GGG | + | chr7_3:78708199-78708218 | None:intergenic | 30.0% | |
! | AGTATTTTTCTACTCCCAAA+TGG | + | chr7_3:78708251-78708270 | None:intergenic | 30.0% |
TATTTGTCAATTGCAAACCA+GGG | - | chr7_3:78708283-78708302 | Msa1127210:intron | 30.0% | |
! | ATCATTGTGAATATTTTCCC+TGG | + | chr7_3:78708303-78708322 | None:intergenic | 30.0% |
AAAGTAAGGATGACATTTAG+AGG | - | chr7_3:78708344-78708363 | Msa1127210:intron | 30.0% | |
! | AAGTGATTTGAAACTAAGCA+TGG | + | chr7_3:78708546-78708565 | None:intergenic | 30.0% |
TTGTATGGATAGGAAAAACA+TGG | - | chr7_3:78708652-78708671 | Msa1127210:CDS | 30.0% | |
TTTGACGAACAAGATACATT+TGG | - | chr7_3:78708702-78708721 | Msa1127210:intron | 30.0% | |
CCATTAAAGTGAGTTCAATT+CGG | - | chr7_3:78708758-78708777 | Msa1127210:intron | 30.0% | |
ATTTCCCCCTCAATTTATAA+TGG | + | chr7_3:78708856-78708875 | None:intergenic | 30.0% | |
AAAAGAGAATGCTTCATGTA+AGG | + | chr7_3:78709030-78709049 | None:intergenic | 30.0% | |
!!! | TTACGTAATTGTTGTTTTGG+TGG | - | chr7_3:78709048-78709067 | Msa1127210:intron | 30.0% |
AAAAATGAATCACTACCAAG+TGG | - | chr7_3:78709249-78709268 | Msa1127210:CDS | 30.0% | |
AAATGTATCCAAGACGTATA+TGG | + | chr7_3:78709423-78709442 | None:intergenic | 30.0% | |
ATTTATAAGTCAAACACACC+TGG | + | chr7_3:78709448-78709467 | None:intergenic | 30.0% | |
GTATATTATGATCATCAGGA+AGG | - | chr7_3:78709667-78709686 | Msa1127210:intron | 30.0% | |
! | AGTTGAACGTAAATTTTCTC+AGG | - | chr7_3:78709741-78709760 | Msa1127210:intron | 30.0% |
! | GTTGAACGTAAATTTTCTCA+GGG | - | chr7_3:78709742-78709761 | Msa1127210:intron | 30.0% |
GAATTTACATCACTAACAAC+AGG | + | chr7_3:78709896-78709915 | None:intergenic | 30.0% | |
AGTATTGTTAAGGATGTCAT+CGG | - | chr7_3:78710107-78710126 | Msa1127210:CDS | 30.0% | |
TGTTCTCAATCAAAATATGC+AGG | - | chr7_3:78710287-78710306 | Msa1127210:intron | 30.0% | |
GGAGCGATATAAAAATATCA+AGG | - | chr7_3:78710308-78710327 | Msa1127210:CDS | 30.0% | |
! | ACAATATGGTGGTGAAAAAA+AGG | + | chr7_3:78710485-78710504 | None:intergenic | 30.0% |
TTGAAGGGAATAGAAATGTT+TGG | - | chr7_3:78710948-78710967 | Msa1127210:CDS | 30.0% | |
TGAAGGGAATAGAAATGTTT+GGG | - | chr7_3:78710949-78710968 | Msa1127210:CDS | 30.0% | |
TAGAAATGTTTGGGAGAAAT+AGG | - | chr7_3:78710958-78710977 | Msa1127210:intron | 30.0% | |
! | TTTTATGATGAAGACTTGCA+AGG | - | chr7_3:78711091-78711110 | Msa1127210:intron | 30.0% |
! | CTTCTTCTTTTCCATTTAGA+TGG | + | chr7_3:78711692-78711711 | None:intergenic | 30.0% |
TACTGATGAGAAAAACAAAC+TGG | - | chr7_3:78711715-78711734 | Msa1127210:intron | 30.0% | |
CAAGAACTATTAAGAAGACA+TGG | + | chr7_3:78711791-78711810 | None:intergenic | 30.0% | |
! | TCTTGCTGTGAAAAATATTG+CGG | - | chr7_3:78711806-78711825 | Msa1127210:intron | 30.0% |
! | CAGTTATATTTTCTACCTTC+AGG | - | chr7_3:78711893-78711912 | Msa1127210:CDS | 30.0% |
AAGCTCTGTAAAAATCGATT+TGG | - | chr7_3:78711922-78711941 | Msa1127210:CDS | 30.0% | |
AACAATTTCGACATACATCA+GGG | + | chr7_3:78712020-78712039 | None:intergenic | 30.0% | |
TGATGTATGTCGAAATTGTT+GGG | - | chr7_3:78712020-78712039 | Msa1127210:CDS | 30.0% | |
! | ATTATTTTCTCTGGTAAAGG+GGG | - | chr7_3:78712090-78712109 | Msa1127210:intron | 30.0% |
!! | AAACCCTCTCTATTATTTTG+TGG | - | chr7_3:78712139-78712158 | Msa1127210:intron | 30.0% |
! | ATAGAGAGTACAATTTGCTT+AGG | + | chr7_3:78712322-78712341 | None:intergenic | 30.0% |
TATTAAATCATTTCAGCCAG+AGG | - | chr7_3:78712348-78712367 | Msa1127210:intron | 30.0% | |
!! | AATTTAGTTTGAATCACCTC+TGG | + | chr7_3:78712367-78712386 | None:intergenic | 30.0% |
AAAACATGATGCTTCTTGTA+AGG | - | chr7_3:78712482-78712501 | Msa1127210:intron | 30.0% | |
TCTTGTAAGGAAACAACAAA+AGG | - | chr7_3:78712495-78712514 | Msa1127210:intron | 30.0% | |
GACAATTGTTAATACACTTC+AGG | - | chr7_3:78712715-78712734 | Msa1127210:intron | 30.0% | |
! | CCGTATCATTCAAGTTAAAA+AGG | + | chr7_3:78712847-78712866 | None:intergenic | 30.0% |
CATAGAAGATATGCTAGAAT+AGG | + | chr7_3:78712909-78712928 | None:intergenic | 30.0% | |
CTATTCTAGCATATCTTCTA+TGG | - | chr7_3:78712907-78712926 | Msa1127210:intron | 30.0% | |
AAAAGCTAATTGCTATGGAA+AGG | - | chr7_3:78713117-78713136 | Msa1127210:intron | 30.0% | |
TCTTATTGAAAACGTGTCTT+TGG | - | chr7_3:78713179-78713198 | Msa1127210:intron | 30.0% | |
TAGTTTCACTTAGTAAGTAG+TGG | - | chr7_3:78713284-78713303 | Msa1127210:intron | 30.0% | |
!! | AAGTAGTGGTGCTATAATTA+AGG | - | chr7_3:78713298-78713317 | Msa1127210:intron | 30.0% |
! | GTAGATTGTGTTTGTTAATG+GGG | - | chr7_3:78713520-78713539 | Msa1127210:intron | 30.0% |
! | TCAAAGGCGTGTTTAATGTT+TGG | - | chr7_3:78707720-78707739 | Msa1127210:CDS | 35.0% |
ATATGTTGATGTCGAGATAC+AGG | + | chr7_3:78707746-78707765 | None:intergenic | 35.0% | |
AATAGGAATAGAAATTGGGC+GGG | - | chr7_3:78707964-78707983 | Msa1127210:intron | 35.0% | |
AATCTATCCAATCTACGACA+AGG | - | chr7_3:78708031-78708050 | Msa1127210:intron | 35.0% | |
AATCTCATCCCCGTATATAA+TGG | - | chr7_3:78708065-78708084 | Msa1127210:intron | 35.0% | |
ATCTCATCCCCGTATATAAT+GGG | - | chr7_3:78708066-78708085 | Msa1127210:intron | 35.0% | |
ACTTGAACCCATTATATACG+GGG | + | chr7_3:78708076-78708095 | None:intergenic | 35.0% | |
ATCACTAAATAGATGGGGAA+GGG | + | chr7_3:78708107-78708126 | None:intergenic | 35.0% | |
TATCACTAAATAGATGGGGA+AGG | + | chr7_3:78708108-78708127 | None:intergenic | 35.0% | |
GTATTTGTCAATTGCAAACC+AGG | - | chr7_3:78708282-78708301 | Msa1127210:intron | 35.0% | |
ATTTCAAAATACACACACCG+AGG | + | chr7_3:78708444-78708463 | None:intergenic | 35.0% | |
!!! | CGGTGTGTGTATTTTGAAAT+CGG | - | chr7_3:78708444-78708463 | Msa1127210:CDS | 35.0% |
!! | TAATTTGTTGCTTGCACGAA+AGG | - | chr7_3:78708573-78708592 | Msa1127210:intron | 35.0% |
!! | AATTTGTTGCTTGCACGAAA+GGG | - | chr7_3:78708574-78708593 | Msa1127210:intron | 35.0% |
TATGGATAGGAAAAACATGG+AGG | - | chr7_3:78708655-78708674 | Msa1127210:CDS | 35.0% | |
ATGGATAGGAAAAACATGGA+GGG | - | chr7_3:78708656-78708675 | Msa1127210:CDS | 35.0% | |
CCGAATTGAACTCACTTTAA+TGG | + | chr7_3:78708761-78708780 | None:intergenic | 35.0% | |
TGTCAAAGTTGAGAACAAAG+TGG | - | chr7_3:78708973-78708992 | Msa1127210:intron | 35.0% | |
TTGAGAACAAAGTGGCAATT+AGG | - | chr7_3:78708981-78709000 | Msa1127210:intron | 35.0% | |
TGAGAACAAAGTGGCAATTA+GGG | - | chr7_3:78708982-78709001 | Msa1127210:intron | 35.0% | |
CTTGCTCATAGAAATATGCA+GGG | + | chr7_3:78709131-78709150 | None:intergenic | 35.0% | |
AGGAAAAGCTTCAGAAGAAT+AGG | - | chr7_3:78709181-78709200 | Msa1127210:intron | 35.0% | |
GGAAAAGCTTCAGAAGAATA+GGG | - | chr7_3:78709182-78709201 | Msa1127210:intron | 35.0% | |
TCTTCAAAGTCAACTTTCCA+AGG | - | chr7_3:78709209-78709228 | Msa1127210:intron | 35.0% | |
TGATATTACTAACATGGCCT+TGG | + | chr7_3:78709229-78709248 | None:intergenic | 35.0% | |
GAAAGAATATTTCCTCCACT+TGG | + | chr7_3:78709267-78709286 | None:intergenic | 35.0% | |
TTGGGACTATAGAACTTACA+CGG | + | chr7_3:78709309-78709328 | None:intergenic | 35.0% | |
!!! | TTCTCACAGGTTTTTTGCTA+CGG | + | chr7_3:78709368-78709387 | None:intergenic | 35.0% |
!! | AAAAACCTGTGAGAAGTATC+AGG | - | chr7_3:78709373-78709392 | Msa1127210:intron | 35.0% |
TGATGAACATGGTTTAACTG+AGG | - | chr7_3:78710076-78710095 | Msa1127210:intron | 35.0% | |
!! | GGAAGTGTTGAGTATTGTTA+AGG | - | chr7_3:78710097-78710116 | Msa1127210:CDS | 35.0% |
CATTACCTGAATTTCTGAAC+TGG | + | chr7_3:78710138-78710157 | None:intergenic | 35.0% | |
! | GAGCAGCTAATTTTATGTCA+TGG | - | chr7_3:78710259-78710278 | Msa1127210:intron | 35.0% |
! | CTCTACGATCTTCATCATTT+TGG | + | chr7_3:78710341-78710360 | None:intergenic | 35.0% |
ATCTTTGATTGTCCTTTGCA+CGG | - | chr7_3:78710564-78710583 | Msa1127210:CDS | 35.0% | |
AAGAAACATGGTTGCTTACT+GGG | + | chr7_3:78710611-78710630 | None:intergenic | 35.0% | |
TTGTATGAGGGGCTTAAATT+TGG | - | chr7_3:78710794-78710813 | Msa1127210:intron | 35.0% | |
!! | TCTTTCGGATTGGAAACTTT+TGG | - | chr7_3:78710911-78710930 | Msa1127210:CDS | 35.0% |
TTTAGTAAACTATTGGGGGA+TGG | - | chr7_3:78711389-78711408 | Msa1127210:intron | 35.0% | |
TTAGTAAACTATTGGGGGAT+GGG | - | chr7_3:78711390-78711409 | Msa1127210:intron | 35.0% | |
TCTGCAAAGTCATATGACTT+TGG | - | chr7_3:78711475-78711494 | Msa1127210:intron | 35.0% | |
!! | TTTGAATGGGTTATGTTGCT+AGG | - | chr7_3:78711580-78711599 | Msa1127210:CDS | 35.0% |
TATACACCTTGTGAATGTGA+GGG | - | chr7_3:78711746-78711765 | Msa1127210:intron | 35.0% | |
! | CTTGCTGTGAAAAATATTGC+GGG | - | chr7_3:78711807-78711826 | Msa1127210:intron | 35.0% |
!! | CTCTGTAAAAATCGATTTGG+AGG | - | chr7_3:78711925-78711944 | Msa1127210:CDS | 35.0% |
CAACAATTTCGACATACATC+AGG | + | chr7_3:78712021-78712040 | None:intergenic | 35.0% | |
CTGATGTATGTCGAAATTGT+TGG | - | chr7_3:78712019-78712038 | Msa1127210:CDS | 35.0% | |
TATGTCGAAATTGTTGGGTT+AGG | - | chr7_3:78712025-78712044 | Msa1127210:CDS | 35.0% | |
AAGTACAAGGAAAACTCTTC+CGG | + | chr7_3:78712165-78712184 | None:intergenic | 35.0% | |
! | TGGCATTTTGTCTATAGTTG+TGG | - | chr7_3:78712412-78712431 | Msa1127210:intron | 35.0% |
TTTGTCTATAGTTGTGGAGA+TGG | - | chr7_3:78712418-78712437 | Msa1127210:intron | 35.0% | |
!!! | GATTTTTTAGGAGAGTACAC+TGG | - | chr7_3:78712755-78712774 | Msa1127210:intron | 35.0% |
GCATCAAAAGCTAATTGCTA+TGG | - | chr7_3:78713112-78713131 | Msa1127210:intron | 35.0% | |
AAAACGTAACAGAGAGAATG+TGG | + | chr7_3:78713404-78713423 | None:intergenic | 35.0% | |
TCGAGTAGGAATATTTGCAA+AGG | - | chr7_3:78713547-78713566 | Msa1127210:intron | 35.0% | |
! | GAGGAGCTTTTCTTTGATTA+CGG | - | chr7_3:78713587-78713606 | Msa1127210:intron | 35.0% |
! | AGGAGCTTTTCTTTGATTAC+GGG | - | chr7_3:78713588-78713607 | Msa1127210:intron | 35.0% |
CTTCATAAACTTCTGGATGA+TGG | - | chr7_3:78713638-78713657 | Msa1127210:intron | 35.0% | |
! | GATGATCCAACATTTTCTCA+AGG | - | chr7_3:78713674-78713693 | Msa1127210:intron | 35.0% |
! | GCTTTTCCTTGAGAAAATGT+TGG | + | chr7_3:78713683-78713702 | None:intergenic | 35.0% |
TTCTCATCCTTGTCGTAGAT+TGG | + | chr7_3:78708041-78708060 | None:intergenic | 40.0% | |
! | TTTGGGGAAAAGTTTGGGTT+CGG | + | chr7_3:78708183-78708202 | None:intergenic | 40.0% |
GTAGGTTTGGGGAAAAGTTT+GGG | + | chr7_3:78708188-78708207 | None:intergenic | 40.0% | |
AGTAGGTTTGGGGAAAAGTT+TGG | + | chr7_3:78708189-78708208 | None:intergenic | 40.0% | |
ATTAGAGACGGAATCGAGTA+CGG | - | chr7_3:78708397-78708416 | Msa1127210:intron | 40.0% | |
AATATCTCAATTACCCGCCT+CGG | - | chr7_3:78708424-78708443 | Msa1127210:CDS | 40.0% | |
TTCAAACTCATATTCCACCC+CGG | - | chr7_3:78708473-78708492 | Msa1127210:CDS | 40.0% | |
! | ATTTGTTGCTTGCACGAAAG+GGG | - | chr7_3:78708575-78708594 | Msa1127210:intron | 40.0% |
TGGATAGGAAAAACATGGAG+GGG | - | chr7_3:78708657-78708676 | Msa1127210:CDS | 40.0% | |
! | TGGATTCAGCTCGTTCATTT+TGG | + | chr7_3:78708741-78708760 | None:intergenic | 40.0% |
GCTTGCTCATAGAAATATGC+AGG | + | chr7_3:78709132-78709151 | None:intergenic | 40.0% | |
!!! | TTCTTCTGAAGCTTTTCCTG+AGG | + | chr7_3:78709180-78709199 | None:intergenic | 40.0% |
AATGAATCACTACCAAGTGG+AGG | - | chr7_3:78709252-78709271 | Msa1127210:CDS | 40.0% | |
!! | TGATGATCGGGTTGATGATT+GGG | + | chr7_3:78709327-78709346 | None:intergenic | 40.0% |
!! | TTGATGATCGGGTTGATGAT+TGG | + | chr7_3:78709328-78709347 | None:intergenic | 40.0% |
! | TCAACCCGATCATCAAGTTT+TGG | - | chr7_3:78709332-78709351 | Msa1127210:CDS | 40.0% |
! | CAACCCGATCATCAAGTTTT+GGG | - | chr7_3:78709333-78709352 | Msa1127210:CDS | 40.0% |
! | TCTCCCAAAACTTGATGATC+GGG | + | chr7_3:78709339-78709358 | None:intergenic | 40.0% |
! | CTCTCCCAAAACTTGATGAT+CGG | + | chr7_3:78709340-78709359 | None:intergenic | 40.0% |
TGTATCCAAGACGTATATGG+AGG | + | chr7_3:78709420-78709439 | None:intergenic | 40.0% | |
! | AGGGTGAAGACCGATTTATT+AGG | - | chr7_3:78709761-78709780 | Msa1127210:intron | 40.0% |
AGGACGGTATTTGATGAACA+TGG | - | chr7_3:78710065-78710084 | Msa1127210:intron | 40.0% | |
ATTGTTAAGGATGTCATCGG+AGG | - | chr7_3:78710110-78710129 | Msa1127210:CDS | 40.0% | |
AGGTACCAGTTCAGAAATTC+AGG | - | chr7_3:78710130-78710149 | Msa1127210:CDS | 40.0% | |
! | TTTTTACTGTCGTCGTTGCA+TGG | - | chr7_3:78710428-78710447 | Msa1127210:CDS | 40.0% |
!! | TTTTGAGAACAACCGTGCAA+AGG | + | chr7_3:78710579-78710598 | None:intergenic | 40.0% |
GAAGAAACATGGTTGCTTAC+TGG | + | chr7_3:78710612-78710631 | None:intergenic | 40.0% | |
AGTTCGAAAAGCAACCAGTT+TGG | - | chr7_3:78710697-78710716 | Msa1127210:CDS | 40.0% | |
CACTTGTGTGACTCAATAGA+AGG | - | chr7_3:78710864-78710883 | Msa1127210:CDS | 40.0% | |
AGTCTACTACTCTTTCGGAT+TGG | - | chr7_3:78710901-78710920 | Msa1127210:CDS | 40.0% | |
ATGGTTAGAGCTTAAGTGTG+AGG | + | chr7_3:78711006-78711025 | None:intergenic | 40.0% | |
! | TGATGTTCCATTTTCGTCCA+TGG | + | chr7_3:78711162-78711181 | None:intergenic | 40.0% |
GAGAGAGAAAGTCTCTTTGA+CGG | + | chr7_3:78711452-78711471 | None:intergenic | 40.0% | |
CTTGTGGACTTCCATCTAAA+TGG | - | chr7_3:78711678-78711697 | Msa1127210:intron | 40.0% | |
GTATACACCTTGTGAATGTG+AGG | - | chr7_3:78711745-78711764 | Msa1127210:intron | 40.0% | |
CGGCCACAAAATAATAGAGA+GGG | + | chr7_3:78712145-78712164 | None:intergenic | 40.0% | |
!! | CCTCTCTATTATTTTGTGGC+CGG | - | chr7_3:78712143-78712162 | Msa1127210:intron | 40.0% |
TAGTTGTGGAGATGGTAACT+TGG | - | chr7_3:78712426-78712445 | Msa1127210:intron | 40.0% | |
AGTTGTGGAGATGGTAACTT+GGG | - | chr7_3:78712427-78712446 | Msa1127210:intron | 40.0% | |
TTTGTCAGATTCTTTGGGCA+AGG | - | chr7_3:78712593-78712612 | Msa1127210:CDS | 40.0% | |
CATATAGAAGCTGATAAGCG+TGG | - | chr7_3:78712791-78712810 | Msa1127210:intron | 40.0% | |
! | TGTCTTGATGCTTTTCGCAA+AGG | - | chr7_3:78713064-78713083 | Msa1127210:intron | 40.0% |
! | GTCTTGATGCTTTTCGCAAA+GGG | - | chr7_3:78713065-78713084 | Msa1127210:intron | 40.0% |
CAAAGGAACACATTGAAGCT+GGG | - | chr7_3:78713564-78713583 | Msa1127210:intron | 40.0% | |
AAAGGAACACATTGAAGCTG+GGG | - | chr7_3:78713565-78713584 | Msa1127210:intron | 40.0% | |
AGAAGTTTATGAAGCCATGG+TGG | + | chr7_3:78713632-78713651 | None:intergenic | 40.0% | |
ACCATGGCTTCATAAACTTC+TGG | - | chr7_3:78713631-78713650 | Msa1127210:intron | 40.0% | |
TCCAGAAGTTTATGAAGCCA+TGG | + | chr7_3:78713635-78713654 | None:intergenic | 40.0% | |
TGTTGGATCATCATCTTCCT+TGG | + | chr7_3:78713666-78713685 | None:intergenic | 40.0% | |
ACACTGACGCTTCTCATCAA+AGG | - | chr7_3:78707704-78707723 | Msa1127210:CDS | 45.0% | |
AATAGAAATTGGGCGGGACA+GGG | - | chr7_3:78707970-78707989 | Msa1127210:intron | 45.0% | |
AGTATATGAGATCCAGGGAC+AGG | + | chr7_3:78708003-78708022 | None:intergenic | 45.0% | |
TAAATAGATGGGGAAGGGAC+GGG | + | chr7_3:78708102-78708121 | None:intergenic | 45.0% | |
CTAAATAGATGGGGAAGGGA+CGG | + | chr7_3:78708103-78708122 | None:intergenic | 45.0% | |
! | TTGGGGAAAAGTTTGGGTTC+GGG | + | chr7_3:78708182-78708201 | None:intergenic | 45.0% |
GAGGCGGGTAATTGAGATAT+TGG | + | chr7_3:78708425-78708444 | None:intergenic | 45.0% | |
TCAAAATACACACACCGAGG+CGG | + | chr7_3:78708441-78708460 | None:intergenic | 45.0% | |
AGCAGGGAAAACCCTTCATT+AGG | - | chr7_3:78708500-78708519 | Msa1127210:CDS | 45.0% | |
GCAGGGAAAACCCTTCATTA+GGG | - | chr7_3:78708501-78708520 | Msa1127210:CDS | 45.0% | |
CAGGGAAAACCCTTCATTAG+GGG | - | chr7_3:78708502-78708521 | Msa1127210:CDS | 45.0% | |
TAGTACTCGCCCCTAATGAA+GGG | + | chr7_3:78708514-78708533 | None:intergenic | 45.0% | |
GGATAGGAAAAACATGGAGG+GGG | - | chr7_3:78708658-78708677 | Msa1127210:CDS | 45.0% | |
CAAAGTGGCAATTAGGGTAC+TGG | - | chr7_3:78708988-78709007 | Msa1127210:intron | 45.0% | |
GGACTATAGAACTTACACGG+TGG | + | chr7_3:78709306-78709325 | None:intergenic | 45.0% | |
!!! | CGATCATCAAGTTTTGGGAG+AGG | - | chr7_3:78709338-78709357 | Msa1127210:CDS | 45.0% |
GGTTACCTCCATATACGTCT+TGG | - | chr7_3:78709412-78709431 | Msa1127210:intron | 45.0% | |
CGTCTTGGATACATTTAGCC+AGG | - | chr7_3:78709427-78709446 | Msa1127210:intron | 45.0% | |
TGAAGAGTCAAACGAGCACA+AGG | - | chr7_3:78709717-78709736 | Msa1127210:intron | 45.0% | |
TCATCACCACATGGTTCTCT+GGG | + | chr7_3:78710738-78710757 | None:intergenic | 45.0% | |
AGGTAACAGTCATCACCACA+TGG | + | chr7_3:78710747-78710766 | None:intergenic | 45.0% | |
CTCAATAGAAGGACAAGCTG+AGG | - | chr7_3:78710875-78710894 | Msa1127210:CDS | 45.0% | |
AATAGAAGGACAAGCTGAGG+AGG | - | chr7_3:78710878-78710897 | Msa1127210:CDS | 45.0% | |
GGAGGAGTCTACTACTCTTT+CGG | - | chr7_3:78710896-78710915 | Msa1127210:CDS | 45.0% | |
! | TTTTCGTCCATGGATCCATG+TGG | + | chr7_3:78711152-78711171 | None:intergenic | 45.0% |
CATGGATCCATGGACGAAAA+TGG | - | chr7_3:78711152-78711171 | Msa1127210:CDS | 45.0% | |
TAAACTATTGGGGGATGGGA+TGG | - | chr7_3:78711394-78711413 | Msa1127210:intron | 45.0% | |
AAACTATTGGGGGATGGGAT+GGG | - | chr7_3:78711395-78711414 | Msa1127210:intron | 45.0% | |
TTTGACGGTGGTTTGAGGAT+GGG | + | chr7_3:78711437-78711456 | None:intergenic | 45.0% | |
AGAGAAAGTCTCTTTGACGG+TGG | + | chr7_3:78711449-78711468 | None:intergenic | 45.0% | |
AGGACAATGAGATGACATCG+AGG | - | chr7_3:78711600-78711619 | Msa1127210:CDS | 45.0% | |
ATGAGATGACATCGAGGTCA+AGG | - | chr7_3:78711606-78711625 | Msa1127210:CDS | 45.0% | |
ACATGGACATTGCTTTCCAC+AGG | + | chr7_3:78711774-78711793 | None:intergenic | 45.0% | |
!! | ACAGAGCTTTGAACACCTGA+AGG | + | chr7_3:78711911-78711930 | None:intergenic | 45.0% |
TCTCTCGAAGCTGCAAAACA+TGG | + | chr7_3:78711991-78712010 | None:intergenic | 45.0% | |
CCGGCCACAAAATAATAGAG+AGG | + | chr7_3:78712146-78712165 | None:intergenic | 45.0% | |
AAGGTCTGATGTTGCTGGAT+GGG | - | chr7_3:78712612-78712631 | Msa1127210:intron | 45.0% | |
TGGATGGGGAGCTTTCTTAA+AGG | - | chr7_3:78712627-78712646 | Msa1127210:intron | 45.0% | |
GTTAATGGGGATCATCGAGT+AGG | - | chr7_3:78713533-78713552 | Msa1127210:intron | 45.0% | |
GCAAAGGAACACATTGAAGC+TGG | - | chr7_3:78713563-78713582 | Msa1127210:intron | 45.0% | |
ACGAAAATAGTCGACCACCA+TGG | - | chr7_3:78713615-78713634 | Msa1127210:intron | 45.0% | |
! | ACTTCTGGATGATGGTTCCA+AGG | - | chr7_3:78713646-78713665 | Msa1127210:intron | 45.0% |
CGTCAGTGTCAGTGCTACAA+AGG | + | chr7_3:78707693-78707712 | None:intergenic | 50.0% | |
GAATAGAAATTGGGCGGGAC+AGG | - | chr7_3:78707969-78707988 | Msa1127210:intron | 50.0% | |
! | TTCGGGGCAAGTTCGAGTTT+GGG | + | chr7_3:78708165-78708184 | None:intergenic | 50.0% |
! | TGGGGAAAAGTTTGGGTTCG+GGG | + | chr7_3:78708181-78708200 | None:intergenic | 50.0% |
CAAAATACACACACCGAGGC+GGG | + | chr7_3:78708440-78708459 | None:intergenic | 50.0% | |
! | AGGGTTTTCCCTGCTTTGAC+CGG | + | chr7_3:78708495-78708514 | None:intergenic | 50.0% |
CTAGTACTCGCCCCTAATGA+AGG | + | chr7_3:78708515-78708534 | None:intergenic | 50.0% | |
GGCATCCTGATACTTCTCAC+AGG | + | chr7_3:78709381-78709400 | None:intergenic | 50.0% | |
TCAGGATGCCAAGCATCAAC+AGG | - | chr7_3:78709391-78709410 | Msa1127210:intron | 50.0% | |
GGAGGTAACCTGTTGATGCT+TGG | + | chr7_3:78709402-78709421 | None:intergenic | 50.0% | |
! | CCTTCAGGTTCTTGCCAAAC+TGG | + | chr7_3:78710714-78710733 | None:intergenic | 50.0% |
CCAGTTTGGCAAGAACCTGA+AGG | - | chr7_3:78710711-78710730 | Msa1127210:intron | 50.0% | |
GTCATCACCACATGGTTCTC+TGG | + | chr7_3:78710739-78710758 | None:intergenic | 50.0% | |
GCTGAAGAGTCAATGCCACA+TGG | - | chr7_3:78711134-78711153 | Msa1127210:CDS | 50.0% | |
GTCAATGCCACATGGATCCA+TGG | - | chr7_3:78711142-78711161 | Msa1127210:CDS | 50.0% | |
AACTATTGGGGGATGGGATG+GGG | - | chr7_3:78711396-78711415 | Msa1127210:intron | 50.0% | |
TTGAGGATGGGGATCTTACG+TGG | + | chr7_3:78711425-78711444 | None:intergenic | 50.0% | |
TTGACGGTGGTTTGAGGATG+GGG | + | chr7_3:78711436-78711455 | None:intergenic | 50.0% | |
CTTTGACGGTGGTTTGAGGA+TGG | + | chr7_3:78711438-78711457 | None:intergenic | 50.0% | |
GTCTCTTTGACGGTGGTTTG+AGG | + | chr7_3:78711442-78711461 | None:intergenic | 50.0% | |
CAAGGTCTGATGTTGCTGGA+TGG | - | chr7_3:78712611-78712630 | Msa1127210:intron | 50.0% | |
AGGTCTGATGTTGCTGGATG+GGG | - | chr7_3:78712613-78712632 | Msa1127210:intron | 50.0% | |
!! | TCAGCGAGAGCACTGTTTCT+TGG | + | chr7_3:78713705-78713724 | None:intergenic | 50.0% |
GGTCTCGGATGCTACAAGCT+CGG | - | chr7_3:78707561-78707580 | Msa1127210:CDS | 55.0% | |
! | GGCAAGTTCGAGTTTGGGGT+TGG | + | chr7_3:78708160-78708179 | None:intergenic | 55.0% |
! | TCGGGGCAAGTTCGAGTTTG+GGG | + | chr7_3:78708164-78708183 | None:intergenic | 55.0% |
! | GTTCGGGGCAAGTTCGAGTT+TGG | + | chr7_3:78708166-78708185 | None:intergenic | 55.0% |
TATTCCACCCCGGTCAAAGC+AGG | - | chr7_3:78708483-78708502 | Msa1127210:CDS | 55.0% | |
ATTCCACCCCGGTCAAAGCA+GGG | - | chr7_3:78708484-78708503 | Msa1127210:CDS | 55.0% | |
! | GGTTTTCCCTGCTTTGACCG+GGG | + | chr7_3:78708493-78708512 | None:intergenic | 55.0% |
! | GGGTTTTCCCTGCTTTGACC+GGG | + | chr7_3:78708494-78708513 | None:intergenic | 55.0% |
!! | CATGGTTCTCTGGGACCTTC+AGG | + | chr7_3:78710729-78710748 | None:intergenic | 55.0% |
GAAGGTCCCAGAGAACCATG+TGG | - | chr7_3:78710729-78710748 | Msa1127210:intron | 55.0% | |
CAGGCTCCCTCACATTCACA+AGG | + | chr7_3:78711755-78711774 | None:intergenic | 55.0% | |
TGTGAATGTGAGGGAGCCTG+TGG | - | chr7_3:78711755-78711774 | Msa1127210:intron | 55.0% | |
TTGGGAGAGTCGTCTCATCG+TGG | - | chr7_3:78712445-78712464 | Msa1127210:intron | 55.0% | |
AGAGTCGTCTCATCGTGGAG+AGG | - | chr7_3:78712450-78712469 | Msa1127210:intron | 55.0% | |
TGGGCAAGGTCTGATGTTGC+TGG | - | chr7_3:78712607-78712626 | Msa1127210:intron | 55.0% | |
GGAACACATTGAAGCTGGGG+AGG | - | chr7_3:78713568-78713587 | Msa1127210:intron | 55.0% | |
AAATTGGGCGGGACAGGGAC+AGG | - | chr7_3:78707975-78707994 | Msa1127210:intron | 60.0% | |
TTTCCCTGCTTTGACCGGGG+TGG | + | chr7_3:78708490-78708509 | None:intergenic | 60.0% | |
CAGGGACAGGTTCCTGTCCC+TGG | - | chr7_3:78707988-78708007 | Msa1127210:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 78707559 | 78713724 | 78707559 | ID=Msa1127210;Name=Msa1127210 |
chr7_3 | mRNA | 78707559 | 78713724 | 78707559 | ID=Msa1127210-mRNA-1;Parent=Msa1127210;Name=Msa1127210-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.53|0.31|0.93|1|1|16|0|718 |
chr7_3 | exon | 78713686 | 78713724 | 78713686 | ID=Msa1127210-mRNA-1:exon:22116;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78712518 | 78712619 | 78712518 | ID=Msa1127210-mRNA-1:exon:22115;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78711835 | 78712100 | 78711835 | ID=Msa1127210-mRNA-1:exon:22114;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78711501 | 78711662 | 78711501 | ID=Msa1127210-mRNA-1:exon:22113;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78711132 | 78711216 | 78711132 | ID=Msa1127210-mRNA-1:exon:22112;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78710834 | 78710974 | 78710834 | ID=Msa1127210-mRNA-1:exon:22111;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78710672 | 78710719 | 78710672 | ID=Msa1127210-mRNA-1:exon:22110;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78710304 | 78710584 | 78710304 | ID=Msa1127210-mRNA-1:exon:22109;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78710087 | 78710216 | 78710087 | ID=Msa1127210-mRNA-1:exon:22108;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78709455 | 78709681 | 78709455 | ID=Msa1127210-mRNA-1:exon:22107;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78709237 | 78709368 | 78709237 | ID=Msa1127210-mRNA-1:exon:22106;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78708767 | 78708854 | 78708767 | ID=Msa1127210-mRNA-1:exon:22105;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78708635 | 78708682 | 78708635 | ID=Msa1127210-mRNA-1:exon:22104;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78708418 | 78708546 | 78708418 | ID=Msa1127210-mRNA-1:exon:22103;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78708145 | 78708222 | 78708145 | ID=Msa1127210-mRNA-1:exon:22102;Parent=Msa1127210-mRNA-1 |
chr7_3 | exon | 78707559 | 78707759 | 78707559 | ID=Msa1127210-mRNA-1:exon:22101;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78713686 | 78713724 | 78713686 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78712518 | 78712619 | 78712518 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78711835 | 78712100 | 78711835 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78711501 | 78711662 | 78711501 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78711132 | 78711216 | 78711132 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78710834 | 78710974 | 78710834 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78710672 | 78710719 | 78710672 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78710304 | 78710584 | 78710304 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78710087 | 78710216 | 78710087 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78709455 | 78709681 | 78709455 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78709237 | 78709368 | 78709237 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78708767 | 78708854 | 78708767 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78708635 | 78708682 | 78708635 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78708418 | 78708546 | 78708418 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78708145 | 78708222 | 78708145 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
chr7_3 | CDS | 78707559 | 78707759 | 78707559 | ID=Msa1127210-mRNA-1:cds;Parent=Msa1127210-mRNA-1 |
Gene Sequence |
Protein sequence |