AlfalfaGEDB | Msa1165450

M. sativa cultivar zhongmu-4 / Msa1165450

KEGG: K11430
GO: GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005911 GO:0006139 GO:0006325 GO:0006342 GO:0006349 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009416 GO:0009506 GO:0009628 GO:0009642 GO:0009646 GO:0009653 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0017053 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0030054 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048316 GO:0048317 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048587 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0055044 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070734 GO:0071514 GO:0071704 GO:0071840 GO:0080050 GO:0080090 GO:0090568 GO:0090698 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000014 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141
PFAM: PF18264.4

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1165450	AES82191.2	91.476	657	48	3	1	654	113	764	0.0	1193

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1165450	sp\|Q9ZSM8\|EZA1_ARATH	59.008	383	144	5	278	653	479	855	3.91e-150	459
Msa1165450	sp\|Q9ZSM8\|EZA1_ARATH	45.992	237	114	4	15	245	86	314	1.05e-52	198

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1165450	G7KSU0	91.476	657	48	3	1	654	113	764	0.0	1193

TFs/TRs:

Gene ID	Type	Classification
Msa1165450	TR	SET

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa1041050	Msa1165450	0.933638	1.383010e-95	-8.615850e-47
Msa1082420	Msa1165450	0.921546	3.114318e-88	-8.615850e-47
Msa1127210	Msa1165450	0.960167	2.977501e-118	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1165450	MtrunA17_Chr7g0270001	92.780	277	17	1	381	654	24	300	0.0	530
Msa1165450	MtrunA17_Chr7g0270011	75.141	354	29	4	1	354	1	295	0.0	516
Msa1165450	MtrunA17_Chr1g0194631	59.036	415	153	7	245	651	351	756	1.90e-161	482
Msa1165450	MtrunA17_Chr1g0194631	51.271	236	108	2	15	245	19	252	5.21e-69	239
Msa1165450	MtrunA17_Chr5g0401921	56.233	377	157	5	279	650	488	861	2.09e-133	412
Msa1165450	MtrunA17_Chr5g0401921	42.254	213	118	1	32	239	126	338	2.76e-47	179
Msa1165450	MtrunA17_Chr7g0235081	58.841	345	133	7	311	650	4	344	4.77e-129	384
Msa1165450	MtrunA17_Chr7g0235091	45.091	275	118	6	51	310	53	309	1.59e-68	226
Msa1165450	MtrunA17_Chr5g0405161	55.440	193	52	4	155	346	12	171	5.46e-57	192
Msa1165450	MtrunA17_Chr5g0405161	53.571	56	26	0	147	202	166	221	5.72e-11	63.2
Msa1165450	MtrunA17_Chr2g0297191	34.783	138	87	2	483	618	1014	1150	8.02e-20	94.7
Msa1165450	MtrunA17_Chr7g0221611	35.537	121	75	2	501	618	904	1024	2.03e-17	86.7
Msa1165450	MtrunA17_Chr8g0347071	33.613	119	77	2	503	619	808	926	2.23e-15	80.1
Msa1165450	MtrunA17_Chr1g0201621	38.532	109	65	1	513	619	95	203	2.95e-15	79.0
Msa1165450	MtrunA17_Chr1g0147121	34.711	121	75	3	502	619	892	1011	4.00e-15	79.3
Msa1165450	MtrunA17_Chr1g0201311	38.532	109	65	1	513	619	95	203	7.19e-15	77.8
Msa1165450	MtrunA17_Chr2g0305371	31.325	166	103	4	456	618	294	451	8.82e-15	77.4
Msa1165450	MtrunA17_Chr7g0275611	32.520	123	81	2	503	623	823	945	3.22e-14	76.6
Msa1165450	MtrunA17_Chr3g0126701	32.773	119	78	2	503	619	922	1040	3.27e-14	76.6
Msa1165450	MtrunA17_Chr3g0125251	32.576	132	87	1	489	618	1311	1442	2.87e-13	73.6
Msa1165450	MtrunA17_Chr1g0149611	29.921	127	80	2	508	625	369	495	8.40e-13	71.2
Msa1165450	MtrunA17_Chr1g0149581	28.125	128	86	1	498	619	1517	1644	1.10e-11	68.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1165450	AT4G02020.1	59.008	383	144	5	278	653	479	855	3.97e-151	459
Msa1165450	AT4G02020.1	45.992	237	114	4	15	245	86	314	1.07e-53	198
Msa1165450	AT2G23380.2	51.422	422	170	6	258	650	258	673	3.69e-134	409
Msa1165450	AT2G23380.2	43.182	88	46	2	153	239	7	91	6.12e-15	79.0
Msa1165450	AT2G23380.1	51.422	422	170	6	258	650	485	900	1.05e-132	412
Msa1165450	AT2G23380.1	42.574	202	112	2	39	239	120	318	2.62e-42	164
Msa1165450	AT1G02580.1	41.463	574	292	11	52	618	124	660	4.10e-132	404
Msa1165450	AT4G02020.4	60.312	320	117	3	278	590	479	795	3.17e-129	400
Msa1165450	AT4G02020.4	45.992	237	114	4	15	245	86	314	5.96e-54	198
Msa1165450	AT4G02020.3	57.929	309	118	4	278	577	479	784	1.09e-113	360
Msa1165450	AT4G02020.3	45.992	237	114	4	15	245	86	314	4.51e-54	198
Msa1165450	AT4G02020.2	57.929	309	118	4	278	577	479	784	1.09e-113	360
Msa1165450	AT4G02020.2	45.992	237	114	4	15	245	86	314	4.51e-54	198
Msa1165450	AT1G02580.2	38.037	489	257	12	36	517	110	559	9.49e-88	285
Msa1165450	AT5G42400.7	36.567	134	82	2	487	618	1235	1367	6.41e-21	98.6
Msa1165450	AT5G42400.2	36.567	134	82	2	487	618	1235	1367	6.41e-21	98.6
Msa1165450	AT5G42400.8	36.567	134	82	2	487	618	1235	1367	6.41e-21	98.6
Msa1165450	AT5G42400.5	36.567	134	82	2	487	618	1235	1367	6.41e-21	98.6
Msa1165450	AT5G42400.4	36.567	134	82	2	487	618	1235	1367	6.41e-21	98.6
Msa1165450	AT5G42400.1	36.567	134	82	2	487	618	1235	1367	6.41e-21	98.6
Msa1165450	AT5G42400.3	36.567	134	82	2	487	618	1235	1367	6.41e-21	98.6
Msa1165450	AT5G42400.6	36.567	134	82	2	487	618	1235	1367	6.41e-21	98.6
Msa1165450	AT2G31650.1	36.364	121	74	2	501	618	897	1017	1.89e-18	90.5
Msa1165450	AT4G30860.1	39.024	123	71	2	499	618	323	444	2.76e-17	85.9
Msa1165450	AT1G05830.2	33.884	121	77	2	501	618	918	1038	2.16e-16	84.0
Msa1165450	AT1G05830.4	33.884	121	77	2	501	618	918	1038	2.16e-16	84.0
Msa1165450	AT1G05830.1	33.884	121	77	2	501	618	918	1038	2.16e-16	84.0
Msa1165450	AT1G05830.3	33.884	121	77	2	501	618	918	1038	2.16e-16	84.0
Msa1165450	AT1G76710.4	40.367	109	63	1	513	619	100	208	2.30e-16	82.8
Msa1165450	AT1G76710.3	40.367	109	63	1	513	619	100	208	2.65e-16	82.8
Msa1165450	AT1G76710.2	40.367	109	63	1	513	619	100	208	2.67e-16	82.8
Msa1165450	AT1G76710.1	40.367	109	63	1	513	619	100	208	2.67e-16	82.8
Msa1165450	AT4G27910.1	34.454	119	76	2	503	619	886	1004	5.95e-15	79.3
Msa1165450	AT5G53430.1	33.607	122	79	2	502	621	901	1022	1.11e-14	78.6
Msa1165450	AT1G77300.1	36.090	133	81	2	489	618	1013	1144	2.05e-13	74.7
Msa1165450	AT1G77300.2	36.090	133	81	2	489	618	1013	1144	2.90e-13	73.9
Msa1165450	AT3G61740.2	30.000	120	81	2	503	619	840	959	1.02e-12	72.0
Msa1165450	AT3G61740.1	30.000	120	81	2	503	619	876	995	1.44e-12	71.6
Msa1165450	AT3G59960.3	31.967	122	81	2	499	618	108	229	4.20e-12	67.8
Msa1165450	AT3G59960.2	31.967	122	81	2	499	618	108	229	4.20e-12	67.8
Msa1165450	AT3G59960.4	31.967	122	81	2	499	618	108	229	4.20e-12	67.8
Msa1165450	AT3G59960.1	31.967	122	81	2	499	618	108	229	6.41e-12	67.8

Find 117 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCGAATTGAACTCACTTTAA+TGG	0.116068	7_4:-57353730	None:intergenic
TGTATATTTGTCAGATTCTT+TGG	0.176923	7_4:+57357583	Msa1165450:intron
TGGATTCAGCTCGTTCATTT+TGG	0.198819	7_4:-57353710	None:intergenic
CTCTACGATCTTCATCATTT+TGG	0.203520	7_4:-57355310	None:intergenic
TTGTAGATTGTGTTTGTTAA+TGG	0.242431	7_4:+57358506	Msa1165450:intron
TAGAAATGTTTGGGAGAAAT+AGG	0.261350	7_4:+57355930	Msa1165450:CDS
CCGTATCATTCAAGTTAAAA+AGG	0.263836	7_4:-57357840	None:intergenic
TTGTATGAGGGGCTTAAATT+TGG	0.276488	7_4:+57355766	Msa1165450:CDS
TCAGCGAGAGCACTGTTTCT+TGG	0.281828	7_4:-57358690	None:intergenic
TCAACCCGATCATCAAGTTT+TGG	0.284315	7_4:+57354304	Msa1165450:CDS
CCTTCAGGTTCTTGCCAAAC+TGG	0.285004	7_4:-57355683	None:intergenic
CATGGATCCATGGACGAAAA+TGG	0.290421	7_4:+57356124	Msa1165450:CDS
CATGGTTCTCTGGGACCTTC+AGG	0.309857	7_4:-57355698	None:intergenic
TGGATGGGGAGCTTTCTTAA+AGG	0.310146	7_4:+57357623	Msa1165450:CDS
TCTTTCGGATTGGAAACTTT+TGG	0.327216	7_4:+57355883	Msa1165450:CDS
TTGAAGGGAATAGAAATGTT+TGG	0.329797	7_4:+57355920	Msa1165450:CDS
CTTGTGGACTTCCATCTAAA+TGG	0.334827	7_4:+57356650	Msa1165450:CDS
TGTAGATTGTGTTTGTTAAT+GGG	0.343535	7_4:+57358507	Msa1165450:intron
AGGAAAAGCTTCAGAAGAAT+AGG	0.345098	7_4:+57354153	Msa1165450:intron
GTCATCACCACATGGTTCTC+TGG	0.363244	7_4:-57355708	None:intergenic
TGGGCAAGGTCTGATGTTGC+TGG	0.366049	7_4:+57357603	Msa1165450:CDS
AGGTACCAGTTCAGAAATTC+AGG	0.366551	7_4:+57355102	Msa1165450:CDS
TACTAATAATACTTATTGTA+TGG	0.369662	7_4:+57353609	None:intergenic
AAGGTCTGATGTTGCTGGAT+GGG	0.377084	7_4:+57357608	Msa1165450:CDS
GTATATTTGTCAGATTCTTT+GGG	0.380194	7_4:+57357584	Msa1165450:intron
TGAAGGGAATAGAAATGTTT+GGG	0.387527	7_4:+57355921	Msa1165450:CDS
AAATGTATCCAAGACGTATA+TGG	0.398309	7_4:-57354392	None:intergenic
TGATATTACTAACATGGCCT+TGG	0.406456	7_4:-57354198	None:intergenic
ACCATGGCTTCATAAACTTC+TGG	0.412370	7_4:+57358619	Msa1165450:CDS
TTGTGACATCTTTATTATGA+AGG	0.413196	7_4:-57355736	None:intergenic
TTTGACGAACAAGATACATT+TGG	0.417321	7_4:+57353674	Msa1165450:five_prime_UTR
TTGATGATCGGGTTGATGAT+TGG	0.418627	7_4:-57354297	None:intergenic
CAAGGTCTGATGTTGCTGGA+TGG	0.418842	7_4:+57357607	Msa1165450:CDS
TGTTGGATCATCATCTTCCT+TGG	0.421957	7_4:-57358651	None:intergenic
GGAGGAGTCTACTACTCTTT+CGG	0.427997	7_4:+57355868	Msa1165450:CDS
AGTTCGAAAAGCAACCAGTT+TGG	0.430460	7_4:+57355669	Msa1165450:intron
TCACAATTAGTAATTGTATG+AGG	0.430536	7_4:+57355753	Msa1165450:CDS
CTTCATAAACTTCTGGATGA+TGG	0.434437	7_4:+57358626	Msa1165450:CDS
GGAAAAGCTTCAGAAGAATA+GGG	0.434496	7_4:+57354154	Msa1165450:intron
AGGTCTGATGTTGCTGGATG+GGG	0.436683	7_4:+57357609	Msa1165450:CDS
TCTCCCAAAACTTGATGATC+GGG	0.437642	7_4:-57354308	None:intergenic
TATGTCGAAATTGTTGGGTT+AGG	0.439250	7_4:+57356997	Msa1165450:CDS
TGATGATCGGGTTGATGATT+GGG	0.450857	7_4:-57354296	None:intergenic
CTCTCCCAAAACTTGATGAT+CGG	0.452457	7_4:-57354309	None:intergenic
CATTACCTGAATTTCTGAAC+TGG	0.453071	7_4:-57355107	None:intergenic
GCAAAGGAACACATTGAAGC+TGG	0.455412	7_4:+57358551	Msa1165450:CDS
CACTTGTGTGACTCAATAGA+AGG	0.458241	7_4:+57355836	Msa1165450:CDS
AAATGTATATTATGATCATC+AGG	0.462380	7_4:+57354635	Msa1165450:CDS
CAACAATTTCGACATACATC+AGG	0.464497	7_4:-57356990	None:intergenic
AGGGTGAAGACCGATTTATT+AGG	0.467728	7_4:+57354733	Msa1165450:CDS
AAATATTCTTCAAAATCTTG+TGG	0.468339	7_4:+57356634	Msa1165450:CDS
TCAGGATGCCAAGCATCAAC+AGG	0.472001	7_4:+57354363	Msa1165450:CDS
GGAAGTGTTGAGTATTGTTA+AGG	0.491359	7_4:+57355069	Msa1165450:CDS
ATCTTTGATTGTCCTTTGCA+CGG	0.496740	7_4:+57355536	Msa1165450:CDS
GCATCAAAAGCTAATTGCTA+TGG	0.496913	7_4:+57358108	Msa1165450:CDS
TTTGTCTATAGTTGTGGAGA+TGG	0.500177	7_4:+57357414	Msa1165450:intron
AAAACATGATGCTTCTTGTA+AGG	0.500417	7_4:+57357478	Msa1165450:CDS
ATGATCAAAAGTATCTAAAG+AGG	0.509607	7_4:-57355378	None:intergenic
CGTCTTGGATACATTTAGCC+AGG	0.511255	7_4:+57354399	Msa1165450:CDS
AGTCTACTACTCTTTCGGAT+TGG	0.511550	7_4:+57355873	Msa1165450:CDS
TTTGTCAGATTCTTTGGGCA+AGG	0.512971	7_4:+57357589	Msa1165450:intron
CACAATTAGTAATTGTATGA+GGG	0.514622	7_4:+57355754	Msa1165450:CDS
CAAAGGAACACATTGAAGCT+GGG	0.517669	7_4:+57358552	Msa1165450:CDS
GTAGATTGTGTTTGTTAATG+GGG	0.518073	7_4:+57358508	Msa1165450:intron
CTGATGTATGTCGAAATTGT+TGG	0.519505	7_4:+57356991	Msa1165450:CDS
GGCATCCTGATACTTCTCAC+AGG	0.523294	7_4:-57354350	None:intergenic
ATAATACTTATTGTATGGAT+AGG	0.529043	7_4:+57353614	Msa1165450:five_prime_UTR
TGATGTATGTCGAAATTGTT+GGG	0.532358	7_4:+57356992	Msa1165450:CDS
TCATCACCACATGGTTCTCT+GGG	0.539476	7_4:-57355707	None:intergenic
GGTTACCTCCATATACGTCT+TGG	0.539814	7_4:+57354384	Msa1165450:CDS
GAAAGAATATTTCCTCCACT+TGG	0.540932	7_4:-57354236	None:intergenic
GTCAATGCCACATGGATCCA+TGG	0.545867	7_4:+57356114	Msa1165450:CDS
TAGTTGTGGAGATGGTAACT+TGG	0.550585	7_4:+57357422	Msa1165450:intron
ACATGGACATTGCTTTCCAC+AGG	0.551199	7_4:-57356743	None:intergenic
AAAAGCTAATTGCTATGGAA+AGG	0.554769	7_4:+57358113	Msa1165450:CDS
TCTTCAAAGTCAACTTTCCA+AGG	0.557371	7_4:+57354181	Msa1165450:five_prime_UTR
TCTCTCGAAGCTGCAAAACA+TGG	0.560977	7_4:-57356960	None:intergenic
TCTTGTAAGGAAACAACAAA+AGG	0.562281	7_4:+57357491	Msa1165450:CDS
ATGAGATGACATCGAGGTCA+AGG	0.562748	7_4:+57356578	Msa1165450:CDS
AGTATTGTTAAGGATGTCAT+CGG	0.565880	7_4:+57355079	Msa1165450:CDS
AGAAACAGTGCTCTCGCTGA+TGG	0.570720	7_4:+57358693	Msa1165450:CDS
AGTTGTGGAGATGGTAACTT+GGG	0.571243	7_4:+57357423	Msa1165450:intron
ACTTCTGGATGATGGTTCCA+AGG	0.574557	7_4:+57358634	Msa1165450:CDS
TCCAGAAGTTTATGAAGCCA+TGG	0.577075	7_4:-57358620	None:intergenic
GGAGGTAACCTGTTGATGCT+TGG	0.585377	7_4:-57354371	None:intergenic
CATATAGAAGCTGATAAGCG+TGG	0.585855	7_4:+57357787	Msa1165450:CDS
ACAATTAGTAATTGTATGAG+GGG	0.586473	7_4:+57355755	Msa1165450:CDS
AATAGAAGGACAAGCTGAGG+AGG	0.588743	7_4:+57355850	Msa1165450:CDS
AGGACGGTATTTGATGAACA+TGG	0.591105	7_4:+57355037	Msa1165450:intron
CAAGAACTATTAAGAAGACA+TGG	0.596810	7_4:-57356760	None:intergenic
GTTAATGGGGATCATCGAGT+AGG	0.597741	7_4:+57358521	Msa1165450:CDS
AACAATTTCGACATACATCA+GGG	0.601740	7_4:-57356989	None:intergenic
TGAAGAGTCAAACGAGCACA+AGG	0.605193	7_4:+57354689	Msa1165450:CDS
GTATACACCTTGTGAATGTG+AGG	0.614412	7_4:+57356717	Msa1165450:CDS
GGAACACATTGAAGCTGGGG+AGG	0.615949	7_4:+57358556	Msa1165450:CDS
TCGAGTAGGAATATTTGCAA+AGG	0.624767	7_4:+57358535	Msa1165450:CDS
CTCAATAGAAGGACAAGCTG+AGG	0.630020	7_4:+57355847	Msa1165450:CDS
AAAGGAACACATTGAAGCTG+GGG	0.641785	7_4:+57358553	Msa1165450:CDS
CCAGTTTGGCAAGAACCTGA+AGG	0.643958	7_4:+57355683	Msa1165450:CDS
TGTGAATGTGAGGGAGCCTG+TGG	0.648105	7_4:+57356727	Msa1165450:CDS
GCTGAAGAGTCAATGCCACA+TGG	0.648318	7_4:+57356106	Msa1165450:CDS
AATGAATCACTACCAAGTGG+AGG	0.658347	7_4:+57354224	Msa1165450:CDS
CAGGCTCCCTCACATTCACA+AGG	0.660511	7_4:-57356724	None:intergenic
GTATATTATGATCATCAGGA+AGG	0.661006	7_4:+57354639	Msa1165450:CDS
TGTATCCAAGACGTATATGG+AGG	0.666836	7_4:-57354389	None:intergenic
TGATGAACATGGTTTAACTG+AGG	0.669808	7_4:+57355048	Msa1165450:CDS
AGAGTCGTCTCATCGTGGAG+AGG	0.678757	7_4:+57357446	Msa1165450:CDS
TATACACCTTGTGAATGTGA+GGG	0.684335	7_4:+57356718	Msa1165450:CDS
ATTGTTAAGGATGTCATCGG+AGG	0.690600	7_4:+57355082	Msa1165450:CDS
TTGGGAGAGTCGTCTCATCG+TGG	0.699122	7_4:+57357441	Msa1165450:CDS
AGGTAACAGTCATCACCACA+TGG	0.703610	7_4:-57355716	None:intergenic
ACGAAAATAGTCGACCACCA+TGG	0.705776	7_4:+57358603	Msa1165450:CDS
AGAAGTTTATGAAGCCATGG+TGG	0.706867	7_4:-57358617	None:intergenic
TTGGGACTATAGAACTTACA+CGG	0.709896	7_4:-57354278	None:intergenic
AGGACAATGAGATGACATCG+AGG	0.791829	7_4:+57356572	Msa1165450:intron
GAAGGTCCCAGAGAACCATG+TGG	0.793045	7_4:+57355701	Msa1165450:CDS
GGACTATAGAACTTACACGG+TGG	0.797366	7_4:-57354275	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTATTTTCCATTATAAATTG+AGG	+	chr7_4:57353818-57353837	Msa1165450:intron	15.0%
!!!	TATTTTCCATTATAAATTGA+GGG	+	chr7_4:57353819-57353838	Msa1165450:intron	15.0%
!!!	ATTTTTTGATATTACTAACA+TGG	-	chr7_4:57354207-57354226	None:intergenic	15.0%
!!!	TTTTGATTTACCTAATAAAT+CGG	-	chr7_4:57354746-57354765	None:intergenic	15.0%
!!	TTGTGACTATTTAATATATT+AGG	+	chr7_4:57355017-57355036	Msa1165450:intron	15.0%
!!	ATATAAAAATATCAAGGAAA+AGG	+	chr7_4:57355286-57355305	Msa1165450:CDS	15.0%
!!	AATTAATTATTCATTGATAC+TGG	-	chr7_4:57355633-57355652	None:intergenic	15.0%
!!!	TCAATGAATAATTAATTTGA+TGG	+	chr7_4:57355636-57355655	Msa1165450:intron	15.0%
!!!	TAACCATTTTTCTAATATTT+TGG	+	chr7_4:57355991-57356010	Msa1165450:intron	15.0%
!!!	ATGTTATTTTAGTAAACTAT+TGG	+	chr7_4:57356354-57356373	Msa1165450:intron	15.0%
!!!	TGTTATTTTAGTAAACTATT+GGG	+	chr7_4:57356355-57356374	Msa1165450:intron	15.0%
!!!	ATACTTAATTCAATTTTACA+AGG	-	chr7_4:57357263-57357282	None:intergenic	15.0%
!!!	TAATATAATGCTTTTAACTA+TGG	+	chr7_4:57357388-57357407	Msa1165450:intron	15.0%
!!	ACAAATATACAAATCAATTA+AGG	-	chr7_4:57357574-57357593	None:intergenic	15.0%
!!!	TATCTATTATTTTGTTTTAG+TGG	+	chr7_4:57358251-57358270	Msa1165450:intron	15.0%
!!	ATAATACTTATTGTATGGAT+AGG	+	chr7_4:57353614-57353633	Msa1165450:five_prime_UTR	20.0%
!!!	ATTTTCCATTATAAATTGAG+GGG	+	chr7_4:57353820-57353839	Msa1165450:intron	20.0%
!!!	AGTTAATTAAGTTGTTTTTG+AGG	+	chr7_4:57353875-57353894	Msa1165450:intron	20.0%
!!	AAATGTATATTATGATCATC+AGG	+	chr7_4:57354635-57354654	Msa1165450:CDS	20.0%
!!!	ATATGTAATACATATTTTGC+TGG	+	chr7_4:57354908-57354927	Msa1165450:intron	20.0%
!!!	CACAATAAGTATAAACTTTT+CGG	-	chr7_4:57354938-57354957	None:intergenic	20.0%
!!	GACTATTTAATATATTAGGA+CGG	+	chr7_4:57355021-57355040	Msa1165450:intron	20.0%
!!	TCATATTATAGACAACAATA+TGG	-	chr7_4:57355471-57355490	None:intergenic	20.0%
!!	CAATGAAGAAAAAAATGATA+TGG	+	chr7_4:57355796-57355815	Msa1165450:CDS	20.0%
!!	GAAAAAGAATTATACTTGAA+GGG	+	chr7_4:57355905-57355924	Msa1165450:CDS	20.0%
!!	AAGCCAAAATATTAGAAAAA+TGG	-	chr7_4:57355997-57356016	None:intergenic	20.0%
!!!	GTTATTTTAGTAAACTATTG+GGG	+	chr7_4:57356356-57356375	Msa1165450:intron	20.0%
!!!	TTATTTTAGTAAACTATTGG+GGG	+	chr7_4:57356357-57356376	Msa1165450:intron	20.0%
!!	AAATATTCTTCAAAATCTTG+TGG	+	chr7_4:57356634-57356653	Msa1165450:CDS	20.0%
!!!	TAAGTCATAAGTAATGTTTT+TGG	+	chr7_4:57357221-57357240	Msa1165450:intron	20.0%
!!!	AAAAATCATTTTTGTTTGCT+GGG	-	chr7_4:57357738-57357757	None:intergenic	20.0%
!!!	AAAAAATCATTTTTGTTTGC+TGG	-	chr7_4:57357739-57357758	None:intergenic	20.0%
!!!	GCAAACAAAAATGATTTTTT+AGG	+	chr7_4:57357739-57357758	Msa1165450:CDS	20.0%
!!	ATTCATAGTATAGGTTAATA+TGG	-	chr7_4:57358029-57358048	None:intergenic	20.0%
!!	ACTGAAAAAATTCATAGTAT+AGG	-	chr7_4:57358038-57358057	None:intergenic	20.0%
!!	TTTTCCATTATAAATTGAGG+GGG	+	chr7_4:57353821-57353840	Msa1165450:intron	25.0%
!!!	CAGTTCCTCTTAATTTTTTA+TGG	+	chr7_4:57353912-57353931	Msa1165450:intron	25.0%
!	CAAGTCCATAAAAAATTAAG+AGG	-	chr7_4:57353920-57353939	None:intergenic	25.0%
!!!	CTCTTAATTTTTTATGGACT+TGG	+	chr7_4:57353918-57353937	Msa1165450:intron	25.0%
!!!	CTTTTACGTAATTGTTGTTT+TGG	+	chr7_4:57354017-57354036	Msa1165450:intron	25.0%
!	GATAATTAAGATTGACTACA+TGG	-	chr7_4:57354126-57354145	None:intergenic	25.0%
!	AATCTTAATTATCTTTCCTC+AGG	+	chr7_4:57354133-57354152	Msa1165450:intron	25.0%
!	CCTAAAAAATTTCATGTAAG+AGG	-	chr7_4:57354463-57354482	None:intergenic	25.0%
!!!	CCTCTTACATGAAATTTTTT+AGG	+	chr7_4:57354460-57354479	Msa1165450:intron	25.0%
!	AGATGACACAAATTTAACAT+AGG	-	chr7_4:57354537-57354556	None:intergenic	25.0%
!!	AATAAGTATAAACTTTTCGG+AGG	-	chr7_4:57354935-57354954	None:intergenic	25.0%
!	CAAGATAATATGTTTAGTGA+AGG	-	chr7_4:57355000-57355019	None:intergenic	25.0%
!!!	ATGATCAAAAGTATCTAAAG+AGG	-	chr7_4:57355381-57355400	None:intergenic	25.0%
!	TATTATAGACAACAATATGG+TGG	-	chr7_4:57355468-57355487	None:intergenic	25.0%
!	AAGAAATGAATGAAGAAACA+TGG	-	chr7_4:57355595-57355614	None:intergenic	25.0%
!	TTGTGACATCTTTATTATGA+AGG	-	chr7_4:57355739-57355758	None:intergenic	25.0%
!	TCACAATTAGTAATTGTATG+AGG	+	chr7_4:57355753-57355772	Msa1165450:CDS	25.0%
!	CACAATTAGTAATTGTATGA+GGG	+	chr7_4:57355754-57355773	Msa1165450:CDS	25.0%
!	ACAATTAGTAATTGTATGAG+GGG	+	chr7_4:57355755-57355774	Msa1165450:CDS	25.0%
!	TGAAGAAAAAAATGATATGG+AGG	+	chr7_4:57355799-57355818	Msa1165450:CDS	25.0%
!	GGAAAAAGAATTATACTTGA+AGG	+	chr7_4:57355904-57355923	Msa1165450:CDS	25.0%
!!!	ATCGTCAAATTGTTTTTGAA+TGG	+	chr7_4:57356538-57356557	Msa1165450:intron	25.0%
!!!	TCGTCAAATTGTTTTTGAAT+GGG	+	chr7_4:57356539-57356558	Msa1165450:intron	25.0%
!!	TTAATTATGTTCCTTTTCGA+TGG	+	chr7_4:57356817-57356836	Msa1165450:intron	25.0%
!!	ATAATTGTTTTCCATCGAAA+AGG	-	chr7_4:57356831-57356850	None:intergenic	25.0%
!	CCAGAGAAAATAATACATAT+AGG	-	chr7_4:57357056-57357075	None:intergenic	25.0%
!!	CCTATATGTATTATTTTCTC+TGG	+	chr7_4:57357053-57357072	Msa1165450:intron	25.0%
!!	TGTATTATTTTCTCTGGTAA+AGG	+	chr7_4:57357059-57357078	Msa1165450:intron	25.0%
!!	GTATTATTTTCTCTGGTAAA+GGG	+	chr7_4:57357060-57357079	Msa1165450:intron	25.0%
!!	TATTATTTTCTCTGGTAAAG+GGG	+	chr7_4:57357061-57357080	Msa1165450:intron	25.0%
!	TAGTACTTAATTCAAGTACA+AGG	-	chr7_4:57357150-57357169	None:intergenic	25.0%
!	TGTATATTTGTCAGATTCTT+TGG	+	chr7_4:57357583-57357602	Msa1165450:intron	25.0%
!	GTATATTTGTCAGATTCTTT+GGG	+	chr7_4:57357584-57357603	Msa1165450:intron	25.0%
!!!	AAAATCATTTTTGTTTGCTG+GGG	-	chr7_4:57357737-57357756	None:intergenic	25.0%
!!!	CCTTTTTAACTTGAATGATA+CGG	+	chr7_4:57357840-57357859	Msa1165450:CDS	25.0%
!!!	TTGTAGTTTTGAATAACAGA+AGG	-	chr7_4:57358436-57358455	None:intergenic	25.0%
!	ATTGAATTGCAAATAATGTG+TGG	+	chr7_4:57358479-57358498	Msa1165450:intron	25.0%
!!	TTGTAGATTGTGTTTGTTAA+TGG	+	chr7_4:57358506-57358525	Msa1165450:intron	25.0%
!!	TGTAGATTGTGTTTGTTAAT+GGG	+	chr7_4:57358507-57358526	Msa1165450:intron	25.0%
	TTGTATGGATAGGAAAAACA+TGG	+	chr7_4:57353624-57353643	Msa1165450:five_prime_UTR	30.0%
	TTTGACGAACAAGATACATT+TGG	+	chr7_4:57353674-57353693	Msa1165450:five_prime_UTR	30.0%
	CCATTAAAGTGAGTTCAATT+CGG	+	chr7_4:57353730-57353749	Msa1165450:intron	30.0%
	ATTTCCCCCTCAATTTATAA+TGG	-	chr7_4:57353828-57353847	None:intergenic	30.0%
	AAAAGAGAATGCTTCATGTA+AGG	-	chr7_4:57354002-57354021	None:intergenic	30.0%
!!!	TTACGTAATTGTTGTTTTGG+TGG	+	chr7_4:57354020-57354039	Msa1165450:intron	30.0%
	AAAAATGAATCACTACCAAG+TGG	+	chr7_4:57354221-57354240	Msa1165450:CDS	30.0%
	AAATGTATCCAAGACGTATA+TGG	-	chr7_4:57354395-57354414	None:intergenic	30.0%
	ATTTATAAGTCAAACACACC+TGG	-	chr7_4:57354420-57354439	None:intergenic	30.0%
	GTATATTATGATCATCAGGA+AGG	+	chr7_4:57354639-57354658	Msa1165450:CDS	30.0%
!	AGTTGAACGTAAATTTTCTC+AGG	+	chr7_4:57354713-57354732	Msa1165450:CDS	30.0%
!	GTTGAACGTAAATTTTCTCA+GGG	+	chr7_4:57354714-57354733	Msa1165450:CDS	30.0%
	GAATTTACATCACTAACAAC+AGG	-	chr7_4:57354868-57354887	None:intergenic	30.0%
	AGTATTGTTAAGGATGTCAT+CGG	+	chr7_4:57355079-57355098	Msa1165450:CDS	30.0%
	TGTTCTCAATCAAAATATGC+AGG	+	chr7_4:57355259-57355278	Msa1165450:intron	30.0%
	GGAGCGATATAAAAATATCA+AGG	+	chr7_4:57355280-57355299	Msa1165450:intron	30.0%
!	ACAATATGGTGGTGAAAAAA+AGG	-	chr7_4:57355457-57355476	None:intergenic	30.0%
	TTGAAGGGAATAGAAATGTT+TGG	+	chr7_4:57355920-57355939	Msa1165450:CDS	30.0%
	TGAAGGGAATAGAAATGTTT+GGG	+	chr7_4:57355921-57355940	Msa1165450:CDS	30.0%
	TAGAAATGTTTGGGAGAAAT+AGG	+	chr7_4:57355930-57355949	Msa1165450:CDS	30.0%
!	TTTTATGATGAAGACTTGCA+AGG	+	chr7_4:57356063-57356082	Msa1165450:CDS	30.0%
	ATTTGACGATCTTTGAATAG+TGG	-	chr7_4:57356528-57356547	None:intergenic	30.0%
!	CTTCTTCTTTTCCATTTAGA+TGG	-	chr7_4:57356664-57356683	None:intergenic	30.0%
	TACTGATGAGAAAAACAAAC+TGG	+	chr7_4:57356687-57356706	Msa1165450:CDS	30.0%
	CAAGAACTATTAAGAAGACA+TGG	-	chr7_4:57356763-57356782	None:intergenic	30.0%
!	TCTTGCTGTGAAAAATATTG+CGG	+	chr7_4:57356778-57356797	Msa1165450:CDS	30.0%
!	CAGTTATATTTTCTACCTTC+AGG	+	chr7_4:57356865-57356884	Msa1165450:intron	30.0%
	AAGCTCTGTAAAAATCGATT+TGG	+	chr7_4:57356894-57356913	Msa1165450:CDS	30.0%
	AACAATTTCGACATACATCA+GGG	-	chr7_4:57356992-57357011	None:intergenic	30.0%
	TGATGTATGTCGAAATTGTT+GGG	+	chr7_4:57356992-57357011	Msa1165450:CDS	30.0%
!	ATTATTTTCTCTGGTAAAGG+GGG	+	chr7_4:57357062-57357081	Msa1165450:intron	30.0%
!!	AAACCCTCTCTATTATTTTG+TGG	+	chr7_4:57357111-57357130	Msa1165450:intron	30.0%
!	ATAGAGAGTACAATTTGCTT+AGG	-	chr7_4:57357318-57357337	None:intergenic	30.0%
	TATTAAATCATTTCAGCCAG+AGG	+	chr7_4:57357344-57357363	Msa1165450:intron	30.0%
!!	AATTTAGTTTGAATCACCTC+TGG	-	chr7_4:57357363-57357382	None:intergenic	30.0%
	AAAACATGATGCTTCTTGTA+AGG	+	chr7_4:57357478-57357497	Msa1165450:CDS	30.0%
	TCTTGTAAGGAAACAACAAA+AGG	+	chr7_4:57357491-57357510	Msa1165450:CDS	30.0%
	GACAATTGTTAATACACTTC+AGG	+	chr7_4:57357711-57357730	Msa1165450:intron	30.0%
!	CCGTATCATTCAAGTTAAAA+AGG	-	chr7_4:57357843-57357862	None:intergenic	30.0%
	CATAGAAGATATGCTAGAAT+AGG	-	chr7_4:57357905-57357924	None:intergenic	30.0%
	CTATTCTAGCATATCTTCTA+TGG	+	chr7_4:57357903-57357922	Msa1165450:intron	30.0%
	AAAAGCTAATTGCTATGGAA+AGG	+	chr7_4:57358113-57358132	Msa1165450:CDS	30.0%
	TCTTATTGAAAACGTGTCTT+TGG	+	chr7_4:57358175-57358194	Msa1165450:intron	30.0%
	TAGTTTCACTTAGTAAGTAG+TGG	+	chr7_4:57358280-57358299	Msa1165450:intron	30.0%
!!	AAGTAGTGGTGCTATAATTA+AGG	+	chr7_4:57358294-57358313	Msa1165450:intron	30.0%
!	GTAGATTGTGTTTGTTAATG+GGG	+	chr7_4:57358508-57358527	Msa1165450:intron	30.0%
	TATGGATAGGAAAAACATGG+AGG	+	chr7_4:57353627-57353646	Msa1165450:five_prime_UTR	35.0%
	ATGGATAGGAAAAACATGGA+GGG	+	chr7_4:57353628-57353647	Msa1165450:five_prime_UTR	35.0%
	CCGAATTGAACTCACTTTAA+TGG	-	chr7_4:57353733-57353752	None:intergenic	35.0%
	TGTCAAAGTTGAGAACAAAG+TGG	+	chr7_4:57353945-57353964	Msa1165450:intron	35.0%
	TTGAGAACAAAGTGGCAATT+AGG	+	chr7_4:57353953-57353972	Msa1165450:intron	35.0%
	TGAGAACAAAGTGGCAATTA+GGG	+	chr7_4:57353954-57353973	Msa1165450:intron	35.0%
	CTTGCTCATAGAAATATGCA+GGG	-	chr7_4:57354103-57354122	None:intergenic	35.0%
	AGGAAAAGCTTCAGAAGAAT+AGG	+	chr7_4:57354153-57354172	Msa1165450:intron	35.0%
	GGAAAAGCTTCAGAAGAATA+GGG	+	chr7_4:57354154-57354173	Msa1165450:intron	35.0%
	TCTTCAAAGTCAACTTTCCA+AGG	+	chr7_4:57354181-57354200	Msa1165450:five_prime_UTR	35.0%
	TGATATTACTAACATGGCCT+TGG	-	chr7_4:57354201-57354220	None:intergenic	35.0%
	GAAAGAATATTTCCTCCACT+TGG	-	chr7_4:57354239-57354258	None:intergenic	35.0%
	TTGGGACTATAGAACTTACA+CGG	-	chr7_4:57354281-57354300	None:intergenic	35.0%
!!!	TTCTCACAGGTTTTTTGCTA+CGG	-	chr7_4:57354340-57354359	None:intergenic	35.0%
!!	AAAAACCTGTGAGAAGTATC+AGG	+	chr7_4:57354345-57354364	Msa1165450:CDS	35.0%
	TGATGAACATGGTTTAACTG+AGG	+	chr7_4:57355048-57355067	Msa1165450:CDS	35.0%
!!	GGAAGTGTTGAGTATTGTTA+AGG	+	chr7_4:57355069-57355088	Msa1165450:CDS	35.0%
	CATTACCTGAATTTCTGAAC+TGG	-	chr7_4:57355110-57355129	None:intergenic	35.0%
!	GAGCAGCTAATTTTATGTCA+TGG	+	chr7_4:57355231-57355250	Msa1165450:intron	35.0%
!	CTCTACGATCTTCATCATTT+TGG	-	chr7_4:57355313-57355332	None:intergenic	35.0%
	ATCTTTGATTGTCCTTTGCA+CGG	+	chr7_4:57355536-57355555	Msa1165450:CDS	35.0%
	AAGAAACATGGTTGCTTACT+GGG	-	chr7_4:57355583-57355602	None:intergenic	35.0%
	TTGTATGAGGGGCTTAAATT+TGG	+	chr7_4:57355766-57355785	Msa1165450:CDS	35.0%
!!	TCTTTCGGATTGGAAACTTT+TGG	+	chr7_4:57355883-57355902	Msa1165450:CDS	35.0%
	TTTAGTAAACTATTGGGGGA+TGG	+	chr7_4:57356361-57356380	Msa1165450:intron	35.0%
	TTAGTAAACTATTGGGGGAT+GGG	+	chr7_4:57356362-57356381	Msa1165450:intron	35.0%
	TCTGCAAAGTCATATGACTT+TGG	+	chr7_4:57356447-57356466	Msa1165450:intron	35.0%
!!	TTTGAATGGGTTATGTTGCT+AGG	+	chr7_4:57356552-57356571	Msa1165450:intron	35.0%
	TATACACCTTGTGAATGTGA+GGG	+	chr7_4:57356718-57356737	Msa1165450:CDS	35.0%
!	CTTGCTGTGAAAAATATTGC+GGG	+	chr7_4:57356779-57356798	Msa1165450:CDS	35.0%
!!	CTCTGTAAAAATCGATTTGG+AGG	+	chr7_4:57356897-57356916	Msa1165450:CDS	35.0%
	CAACAATTTCGACATACATC+AGG	-	chr7_4:57356993-57357012	None:intergenic	35.0%
	CTGATGTATGTCGAAATTGT+TGG	+	chr7_4:57356991-57357010	Msa1165450:CDS	35.0%
	TATGTCGAAATTGTTGGGTT+AGG	+	chr7_4:57356997-57357016	Msa1165450:CDS	35.0%
	AAGTACAAGGAAAACTCTTC+CGG	-	chr7_4:57357137-57357156	None:intergenic	35.0%
!	TGGCATTTTGTCTATAGTTG+TGG	+	chr7_4:57357408-57357427	Msa1165450:intron	35.0%
	TTTGTCTATAGTTGTGGAGA+TGG	+	chr7_4:57357414-57357433	Msa1165450:intron	35.0%
!!!	GATTTTTTAGGAGAGTACAC+TGG	+	chr7_4:57357751-57357770	Msa1165450:CDS	35.0%
	AAAACGTAACAGAGAGAATG+TGG	-	chr7_4:57358400-57358419	None:intergenic	35.0%
	TCGAGTAGGAATATTTGCAA+AGG	+	chr7_4:57358535-57358554	Msa1165450:CDS	35.0%
!	GAGGAGCTTTTCTTTGATTA+CGG	+	chr7_4:57358575-57358594	Msa1165450:CDS	35.0%
!	AGGAGCTTTTCTTTGATTAC+GGG	+	chr7_4:57358576-57358595	Msa1165450:CDS	35.0%
	CTTCATAAACTTCTGGATGA+TGG	+	chr7_4:57358626-57358645	Msa1165450:CDS	35.0%
!	GATGATCCAACATTTTCTCA+AGG	+	chr7_4:57358662-57358681	Msa1165450:CDS	35.0%
!	GCTTTTCCTTGAGAAAATGT+TGG	-	chr7_4:57358671-57358690	None:intergenic	35.0%
	TGGATAGGAAAAACATGGAG+GGG	+	chr7_4:57353629-57353648	Msa1165450:five_prime_UTR	40.0%
!	TGGATTCAGCTCGTTCATTT+TGG	-	chr7_4:57353713-57353732	None:intergenic	40.0%
	GCTTGCTCATAGAAATATGC+AGG	-	chr7_4:57354104-57354123	None:intergenic	40.0%
!!!	TTCTTCTGAAGCTTTTCCTG+AGG	-	chr7_4:57354152-57354171	None:intergenic	40.0%
	AATGAATCACTACCAAGTGG+AGG	+	chr7_4:57354224-57354243	Msa1165450:CDS	40.0%
!!	TGATGATCGGGTTGATGATT+GGG	-	chr7_4:57354299-57354318	None:intergenic	40.0%
!!	TTGATGATCGGGTTGATGAT+TGG	-	chr7_4:57354300-57354319	None:intergenic	40.0%
!	TCAACCCGATCATCAAGTTT+TGG	+	chr7_4:57354304-57354323	Msa1165450:CDS	40.0%
!	CAACCCGATCATCAAGTTTT+GGG	+	chr7_4:57354305-57354324	Msa1165450:CDS	40.0%
!	TCTCCCAAAACTTGATGATC+GGG	-	chr7_4:57354311-57354330	None:intergenic	40.0%
!	CTCTCCCAAAACTTGATGAT+CGG	-	chr7_4:57354312-57354331	None:intergenic	40.0%
	TGTATCCAAGACGTATATGG+AGG	-	chr7_4:57354392-57354411	None:intergenic	40.0%
!	AGGGTGAAGACCGATTTATT+AGG	+	chr7_4:57354733-57354752	Msa1165450:CDS	40.0%
	AGGACGGTATTTGATGAACA+TGG	+	chr7_4:57355037-57355056	Msa1165450:intron	40.0%
	ATTGTTAAGGATGTCATCGG+AGG	+	chr7_4:57355082-57355101	Msa1165450:CDS	40.0%
	AGGTACCAGTTCAGAAATTC+AGG	+	chr7_4:57355102-57355121	Msa1165450:CDS	40.0%
!	TTTTTACTGTCGTCGTTGCA+TGG	+	chr7_4:57355400-57355419	Msa1165450:CDS	40.0%
!!	TTTTGAGAACAACCGTGCAA+AGG	-	chr7_4:57355551-57355570	None:intergenic	40.0%
	GAAGAAACATGGTTGCTTAC+TGG	-	chr7_4:57355584-57355603	None:intergenic	40.0%
	AGTTCGAAAAGCAACCAGTT+TGG	+	chr7_4:57355669-57355688	Msa1165450:intron	40.0%
	CACTTGTGTGACTCAATAGA+AGG	+	chr7_4:57355836-57355855	Msa1165450:CDS	40.0%
	AGTCTACTACTCTTTCGGAT+TGG	+	chr7_4:57355873-57355892	Msa1165450:CDS	40.0%
	ATGGTTAGAGCTTAAGTGTG+AGG	-	chr7_4:57355978-57355997	None:intergenic	40.0%
!	TGATGTTCCATTTTCGTCCA+TGG	-	chr7_4:57356134-57356153	None:intergenic	40.0%
	GAGAGAGAAAGTCTCTTTGA+CGG	-	chr7_4:57356424-57356443	None:intergenic	40.0%
	CTTGTGGACTTCCATCTAAA+TGG	+	chr7_4:57356650-57356669	Msa1165450:CDS	40.0%
	GTATACACCTTGTGAATGTG+AGG	+	chr7_4:57356717-57356736	Msa1165450:CDS	40.0%
	CGGCCACAAAATAATAGAGA+GGG	-	chr7_4:57357117-57357136	None:intergenic	40.0%
!!	CCTCTCTATTATTTTGTGGC+CGG	+	chr7_4:57357115-57357134	Msa1165450:intron	40.0%
	TAGTTGTGGAGATGGTAACT+TGG	+	chr7_4:57357422-57357441	Msa1165450:intron	40.0%
	AGTTGTGGAGATGGTAACTT+GGG	+	chr7_4:57357423-57357442	Msa1165450:intron	40.0%
	TTTGTCAGATTCTTTGGGCA+AGG	+	chr7_4:57357589-57357608	Msa1165450:intron	40.0%
	CATATAGAAGCTGATAAGCG+TGG	+	chr7_4:57357787-57357806	Msa1165450:CDS	40.0%
!	TGTCTTGATGCTTTTCGCAA+AGG	+	chr7_4:57358060-57358079	Msa1165450:CDS	40.0%
!	GTCTTGATGCTTTTCGCAAA+GGG	+	chr7_4:57358061-57358080	Msa1165450:CDS	40.0%
	CAAAGGAACACATTGAAGCT+GGG	+	chr7_4:57358552-57358571	Msa1165450:CDS	40.0%
	AAAGGAACACATTGAAGCTG+GGG	+	chr7_4:57358553-57358572	Msa1165450:CDS	40.0%
	AGAAGTTTATGAAGCCATGG+TGG	-	chr7_4:57358620-57358639	None:intergenic	40.0%
	ACCATGGCTTCATAAACTTC+TGG	+	chr7_4:57358619-57358638	Msa1165450:CDS	40.0%
	TCCAGAAGTTTATGAAGCCA+TGG	-	chr7_4:57358623-57358642	None:intergenic	40.0%
	TGTTGGATCATCATCTTCCT+TGG	-	chr7_4:57358654-57358673	None:intergenic	40.0%
	GGATAGGAAAAACATGGAGG+GGG	+	chr7_4:57353630-57353649	Msa1165450:five_prime_UTR	45.0%
	CAAAGTGGCAATTAGGGTAC+TGG	+	chr7_4:57353960-57353979	Msa1165450:intron	45.0%
	GGACTATAGAACTTACACGG+TGG	-	chr7_4:57354278-57354297	None:intergenic	45.0%
!!!	CGATCATCAAGTTTTGGGAG+AGG	+	chr7_4:57354310-57354329	Msa1165450:CDS	45.0%
	GGTTACCTCCATATACGTCT+TGG	+	chr7_4:57354384-57354403	Msa1165450:CDS	45.0%
	CGTCTTGGATACATTTAGCC+AGG	+	chr7_4:57354399-57354418	Msa1165450:CDS	45.0%
	TGAAGAGTCAAACGAGCACA+AGG	+	chr7_4:57354689-57354708	Msa1165450:CDS	45.0%
	TCATCACCACATGGTTCTCT+GGG	-	chr7_4:57355710-57355729	None:intergenic	45.0%
	AGGTAACAGTCATCACCACA+TGG	-	chr7_4:57355719-57355738	None:intergenic	45.0%
	CTCAATAGAAGGACAAGCTG+AGG	+	chr7_4:57355847-57355866	Msa1165450:CDS	45.0%
	AATAGAAGGACAAGCTGAGG+AGG	+	chr7_4:57355850-57355869	Msa1165450:CDS	45.0%
	GGAGGAGTCTACTACTCTTT+CGG	+	chr7_4:57355868-57355887	Msa1165450:CDS	45.0%
!	TTTTCGTCCATGGATCCATG+TGG	-	chr7_4:57356124-57356143	None:intergenic	45.0%
	CATGGATCCATGGACGAAAA+TGG	+	chr7_4:57356124-57356143	Msa1165450:CDS	45.0%
	TAAACTATTGGGGGATGGGA+TGG	+	chr7_4:57356366-57356385	Msa1165450:intron	45.0%
	AAACTATTGGGGGATGGGAT+GGG	+	chr7_4:57356367-57356386	Msa1165450:intron	45.0%
	TTTGACGGTGGTTTGAGGAT+GGG	-	chr7_4:57356409-57356428	None:intergenic	45.0%
	AGAGAAAGTCTCTTTGACGG+TGG	-	chr7_4:57356421-57356440	None:intergenic	45.0%
	AGGACAATGAGATGACATCG+AGG	+	chr7_4:57356572-57356591	Msa1165450:intron	45.0%
	ATGAGATGACATCGAGGTCA+AGG	+	chr7_4:57356578-57356597	Msa1165450:CDS	45.0%
	ACATGGACATTGCTTTCCAC+AGG	-	chr7_4:57356746-57356765	None:intergenic	45.0%
!!	ACAGAGCTTTGAACACCTGA+AGG	-	chr7_4:57356883-57356902	None:intergenic	45.0%
	TCTCTCGAAGCTGCAAAACA+TGG	-	chr7_4:57356963-57356982	None:intergenic	45.0%
	CCGGCCACAAAATAATAGAG+AGG	-	chr7_4:57357118-57357137	None:intergenic	45.0%
	AAGGTCTGATGTTGCTGGAT+GGG	+	chr7_4:57357608-57357627	Msa1165450:CDS	45.0%
	TGGATGGGGAGCTTTCTTAA+AGG	+	chr7_4:57357623-57357642	Msa1165450:CDS	45.0%
	GTTAATGGGGATCATCGAGT+AGG	+	chr7_4:57358521-57358540	Msa1165450:CDS	45.0%
	GCAAAGGAACACATTGAAGC+TGG	+	chr7_4:57358551-57358570	Msa1165450:CDS	45.0%
	ACGAAAATAGTCGACCACCA+TGG	+	chr7_4:57358603-57358622	Msa1165450:CDS	45.0%
!	ACTTCTGGATGATGGTTCCA+AGG	+	chr7_4:57358634-57358653	Msa1165450:CDS	45.0%
	GGCATCCTGATACTTCTCAC+AGG	-	chr7_4:57354353-57354372	None:intergenic	50.0%
	TCAGGATGCCAAGCATCAAC+AGG	+	chr7_4:57354363-57354382	Msa1165450:CDS	50.0%
	GGAGGTAACCTGTTGATGCT+TGG	-	chr7_4:57354374-57354393	None:intergenic	50.0%
!	CCTTCAGGTTCTTGCCAAAC+TGG	-	chr7_4:57355686-57355705	None:intergenic	50.0%
	CCAGTTTGGCAAGAACCTGA+AGG	+	chr7_4:57355683-57355702	Msa1165450:CDS	50.0%
	GTCATCACCACATGGTTCTC+TGG	-	chr7_4:57355711-57355730	None:intergenic	50.0%
	GCTGAAGAGTCAATGCCACA+TGG	+	chr7_4:57356106-57356125	Msa1165450:CDS	50.0%
	GTCAATGCCACATGGATCCA+TGG	+	chr7_4:57356114-57356133	Msa1165450:CDS	50.0%
	AACTATTGGGGGATGGGATG+GGG	+	chr7_4:57356368-57356387	Msa1165450:intron	50.0%
	TTGAGGATGGGGATCTTACG+TGG	-	chr7_4:57356397-57356416	None:intergenic	50.0%
	TTGACGGTGGTTTGAGGATG+GGG	-	chr7_4:57356408-57356427	None:intergenic	50.0%
	CTTTGACGGTGGTTTGAGGA+TGG	-	chr7_4:57356410-57356429	None:intergenic	50.0%
	GTCTCTTTGACGGTGGTTTG+AGG	-	chr7_4:57356414-57356433	None:intergenic	50.0%
	CAAGGTCTGATGTTGCTGGA+TGG	+	chr7_4:57357607-57357626	Msa1165450:CDS	50.0%
	AGGTCTGATGTTGCTGGATG+GGG	+	chr7_4:57357609-57357628	Msa1165450:CDS	50.0%
!!	TCAGCGAGAGCACTGTTTCT+TGG	-	chr7_4:57358693-57358712	None:intergenic	50.0%
!!	CATGGTTCTCTGGGACCTTC+AGG	-	chr7_4:57355701-57355720	None:intergenic	55.0%
	GAAGGTCCCAGAGAACCATG+TGG	+	chr7_4:57355701-57355720	Msa1165450:CDS	55.0%
	CAGGCTCCCTCACATTCACA+AGG	-	chr7_4:57356727-57356746	None:intergenic	55.0%
	TGTGAATGTGAGGGAGCCTG+TGG	+	chr7_4:57356727-57356746	Msa1165450:CDS	55.0%
	TTGGGAGAGTCGTCTCATCG+TGG	+	chr7_4:57357441-57357460	Msa1165450:CDS	55.0%
	AGAGTCGTCTCATCGTGGAG+AGG	+	chr7_4:57357446-57357465	Msa1165450:CDS	55.0%
	TGGGCAAGGTCTGATGTTGC+TGG	+	chr7_4:57357603-57357622	Msa1165450:CDS	55.0%
	GGAACACATTGAAGCTGGGG+AGG	+	chr7_4:57358556-57358575	Msa1165450:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_4	gene	57353612	57358712	57353612	ID=Msa1165450;Name=Msa1165450
chr7_4	mRNA	57353612	57358712	57353612	ID=Msa1165450-mRNA-1;Parent=Msa1165450;Name=Msa1165450-mRNA-1;_AED=0.09;_eAED=0.09;_QI=177\|0.57\|0.4\|1\|1\|1\|15\|0\|654
chr7_4	exon	57353612	57353737	57353612	ID=Msa1165450-mRNA-1:exon:17295;Parent=Msa1165450-mRNA-1
chr7_4	exon	57354155	57354420	57354155	ID=Msa1165450-mRNA-1:exon:17296;Parent=Msa1165450-mRNA-1
chr7_4	exon	57354593	57354754	57354593	ID=Msa1165450-mRNA-1:exon:17297;Parent=Msa1165450-mRNA-1
chr7_4	exon	57355039	57355123	57355039	ID=Msa1165450-mRNA-1:exon:17298;Parent=Msa1165450-mRNA-1
chr7_4	exon	57355281	57355421	57355281	ID=Msa1165450-mRNA-1:exon:17299;Parent=Msa1165450-mRNA-1
chr7_4	exon	57355536	57355583	57355536	ID=Msa1165450-mRNA-1:exon:17300;Parent=Msa1165450-mRNA-1
chr7_4	exon	57355671	57355951	57355671	ID=Msa1165450-mRNA-1:exon:17301;Parent=Msa1165450-mRNA-1
chr7_4	exon	57356039	57356168	57356039	ID=Msa1165450-mRNA-1:exon:17302;Parent=Msa1165450-mRNA-1
chr7_4	exon	57356574	57356800	57356574	ID=Msa1165450-mRNA-1:exon:17303;Parent=Msa1165450-mRNA-1
chr7_4	exon	57356887	57357018	57356887	ID=Msa1165450-mRNA-1:exon:17304;Parent=Msa1165450-mRNA-1
chr7_4	exon	57357425	57357512	57357425	ID=Msa1165450-mRNA-1:exon:17305;Parent=Msa1165450-mRNA-1
chr7_4	exon	57357597	57357644	57357597	ID=Msa1165450-mRNA-1:exon:17306;Parent=Msa1165450-mRNA-1
chr7_4	exon	57357733	57357861	57357733	ID=Msa1165450-mRNA-1:exon:17307;Parent=Msa1165450-mRNA-1
chr7_4	exon	57358057	57358134	57358057	ID=Msa1165450-mRNA-1:exon:17308;Parent=Msa1165450-mRNA-1
chr7_4	exon	57358512	57358712	57358512	ID=Msa1165450-mRNA-1:exon:17309;Parent=Msa1165450-mRNA-1
chr7_4	five_prime_UTR	57353612	57353737	57353612	ID=Msa1165450-mRNA-1:five_prime_utr;Parent=Msa1165450-mRNA-1
chr7_4	five_prime_UTR	57354155	57354205	57354155	ID=Msa1165450-mRNA-1:five_prime_utr;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57354206	57354420	57354206	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57354593	57354754	57354593	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57355039	57355123	57355039	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57355281	57355421	57355281	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57355536	57355583	57355536	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57355671	57355951	57355671	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57356039	57356168	57356039	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57356574	57356800	57356574	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57356887	57357018	57356887	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57357425	57357512	57357425	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57357597	57357644	57357597	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57357733	57357861	57357733	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57358057	57358134	57358057	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1
chr7_4	CDS	57358512	57358712	57358512	ID=Msa1165450-mRNA-1:cds;Parent=Msa1165450-mRNA-1

Gene Sequence

>Msa1165450

ATGTTAGTAATATCAAAAAATGAATCACTACCAAGTGGAGGAAATATTCTTTCTTCAAGAATGAATCGTCCACCGTGTAAGTTCTATAGTCCCAATCATCAACCCGATCATCAAGTTTTGGGAGAGGAAGACCGTAGCAAAAAACCTGTGAGAAGTATCAGGATGCCAAGCATCAACAGGTTACCTCCATATACGTCTTGGATACATTTAGCCAGAAATGAAAAAATGACTGCAGATCAGTCAGTTTCTAGAAAAAGAAATGTATATTATGATCATCAGGAAGGTGAAACATTAGTATGCAGTGATAGTGATGAAGAGTCAAACGAGCACAAGGAAGTTGAACGTAAATTTTCTCAGGGTGAAGACCGATTTATTAGGACGGTATTTGATGAACATGGTTTAACTGAGGAAGTGTTGAGTATTGTTAAGGATGTCATCGGAGGTACCAGTTCAGAAATTCAGGAGCGATATAAAAATATCAAGGAAAAGGACCAAAATGATGAAGATCGTAGAGAAAGTGAATCTCAGACTGATATAAGCTTGAACAAAAGCTTGAGTGCCTCTTTAGATACTTTTGATCATTTTTACTGTCGTCGTTGCATGATCTTTGATTGTCCTTTGCACGGTTGTTCTCAAAAGATAATATACCCATTCGAAAAGCAACCAGTTTGGCAAGAACCTGAAGGTCCCAGAGAACCATGTGGTGATGACTGTTACCTTCATAATAAAGATGTCACAATTAGTAATTGTATGAGGGGCTTAAATTTGGATGCTAACAATGAAGAAAAAAATGATATGGAGGAAACAAAATCGAAACACTTGTGTGACTCAATAGAAGGACAAGCTGAGGAGGAGTCTACTACTCTTTCGGATTGGAAACTTTTGGAAAAAGAATTATACTTGAAGGGAATAGAAATGTTTGGGAGAAATAGTTGTCTTATAGCTAAGAACTTACTTTTTATGATGAAGACTTGCAAGGAAGTTGCTAGATACATGTATGCTGAAGAGTCAATGCCACATGGATCCATGGACGAAAATGGAACATCAGATGCAATGCGCATTGACAATGAGATGACATCGAGGTCAAGGTCGTTGCAAAGAAAGAGCAAATCTAAGAAGTTCAAATATTCTTCAAAATCTTGTGGACTTCCATCTAAATGGAAAAGAAGAAGAAATACTGATGAGAAAAACAAACTGGAGAAGCAGTATACACCTTGTGAATGTGAGGGAGCCTGTGGAAAGCAATGTCCATGTCTTCTTAATAGTTCTTGCTGTGAAAAATATTGCGGGTGTTCAAAGCTCTGTAAAAATCGATTTGGAGGATGTCAGTGTACTAAGAGTCAGTGTAGAAGTCGACACTGTCCATGTTTTGCAGCTTCGAGAGATTGTGACCCTGATGTATGTCGAAATTGTTGGGTTAGTTGTGGAGATGGTAACTTGGGAGAGTCGTCTCATCGTGGAGAGGATCAATGTGAAAACATGATGCTTCTTGTAAGGAAACAACAAAAGATTCTTTGGGCAAGGTCTGATGTTGCTGGATGGGGAGCTTTCTTAAAGGCCCCAGCAAACAAAAATGATTTTTTAGGAGAGTACACTGGTGAAGTAATCTCTCATATAGAAGCTGATAAGCGTGGAAAATTTTATGATCGTGTAGACTTTTCGTACCTTTTTAACTTGAATGATACGTACTGTCTTGATGCTTTTCGCAAAGGGAACAAGTTGAAGTTTGCAAATCACGCATCAAAAGCTAATTGCTATGGAAAGATTGTGTTTGTTAATGGGGATCATCGAGTAGGAATATTTGCAAAGGAACACATTGAAGCTGGGGAGGAGCTTTTCTTTGATTACGGGTATGACGAAAATAGTCGACCACCATGGCTTCATAAACTTCTGGATGATGGTTCCAAGGAAGATGATGATCCAACATTTTCTCAAGGAAAAGCCAAGAAACAGTGCTCTCGCTGA

Protein sequence

>Msa1165450

MLVISKNESLPSGGNILSSRMNRPPCKFYSPNHQPDHQVLGEEDRSKKPVRSIRMPSINRLPPYTSWIHLARNEKMTADQSVSRKRNVYYDHQEGETLVCSDSDEESNEHKEVERKFSQGEDRFIRTVFDEHGLTEEVLSIVKDVIGGTSSEIQERYKNIKEKDQNDEDRRESESQTDISLNKSLSASLDTFDHFYCRRCMIFDCPLHGCSQKIIYPFEKQPVWQEPEGPREPCGDDCYLHNKDVTISNCMRGLNLDANNEEKNDMEETKSKHLCDSIEGQAEEESTTLSDWKLLEKELYLKGIEMFGRNSCLIAKNLLFMMKTCKEVARYMYAEESMPHGSMDENGTSDAMRIDNEMTSRSRSLQRKSKSKKFKYSSKSCGLPSKWKRRRNTDEKNKLEKQYTPCECEGACGKQCPCLLNSSCCEKYCGCSKLCKNRFGGCQCTKSQCRSRHCPCFAASRDCDPDVCRNCWVSCGDGNLGESSHRGEDQCENMMLLVRKQQKILWARSDVAGWGAFLKAPANKNDFLGEYTGEVISHIEADKRGKFYDRVDFSYLFNLNDTYCLDAFRKGNKLKFANHASKANCYGKIVFVNGDHRVGIFAKEHIEAGEELFFDYGYDENSRPPWLHKLLDDGSKEDDDPTFSQGKAKKQCSR*