Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082890 | AES82275.2 | 99.511 | 409 | 2 | 0 | 1 | 409 | 1 | 409 | 0.0 | 842 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082890 | sp|A2RVR7|MTRF1_ARATH | 75.066 | 377 | 94 | 0 | 33 | 409 | 37 | 413 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082890 | G7KUL3 | 99.511 | 409 | 2 | 0 | 1 | 409 | 1 | 409 | 0.0 | 842 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1040640 | Msa1082890 | 0.935620 | 6.361540e-97 | -8.615850e-47 |
| Msa1082500 | Msa1082890 | 0.807238 | 5.572211e-50 | -8.615850e-47 |
| Msa1082890 | Msa1411020 | 0.803241 | 3.829899e-49 | -8.615850e-47 |
| Msa1082890 | Msa1424290 | 0.803352 | 3.632764e-49 | -8.615850e-47 |
| Msa1082890 | Msa1434350 | 0.805845 | 1.096699e-49 | -8.615850e-47 |
| Msa1082890 | Msa1439320 | 0.808515 | 2.982517e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082890 | MtrunA17_Chr7g0270701 | 99.511 | 409 | 2 | 0 | 1 | 409 | 1 | 409 | 0.0 | 841 |
| Msa1082890 | MtrunA17_Chr7g0268791 | 41.584 | 303 | 173 | 1 | 68 | 370 | 76 | 374 | 4.49e-76 | 242 |
| Msa1082890 | MtrunA17_Chr7g0271771 | 37.500 | 320 | 174 | 11 | 100 | 401 | 164 | 475 | 3.60e-50 | 176 |
| Msa1082890 | MtrunA17_Chr7g0249581 | 31.161 | 353 | 218 | 10 | 49 | 394 | 123 | 457 | 1.25e-35 | 136 |
| Msa1082890 | MtrunA17_Chr1g0172361 | 27.742 | 310 | 204 | 7 | 82 | 383 | 109 | 406 | 1.38e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082890 | AT2G47020.1 | 75.066 | 377 | 94 | 0 | 33 | 409 | 37 | 413 | 0.0 | 592 |
| Msa1082890 | AT2G47020.3 | 70.223 | 403 | 94 | 1 | 33 | 409 | 37 | 439 | 0.0 | 579 |
| Msa1082890 | AT2G47020.4 | 77.219 | 338 | 77 | 0 | 72 | 409 | 11 | 348 | 0.0 | 544 |
| Msa1082890 | AT2G47020.5 | 72.954 | 281 | 76 | 0 | 33 | 313 | 37 | 317 | 1.64e-149 | 427 |
| Msa1082890 | AT2G47020.2 | 71.368 | 234 | 67 | 0 | 33 | 266 | 37 | 270 | 4.05e-116 | 340 |
| Msa1082890 | AT3G62910.1 | 40.557 | 323 | 176 | 3 | 75 | 394 | 82 | 391 | 9.01e-81 | 254 |
| Msa1082890 | AT1G56350.1 | 36.093 | 302 | 176 | 7 | 106 | 394 | 174 | 471 | 5.46e-48 | 171 |
| Msa1082890 | AT5G36170.2 | 33.333 | 312 | 188 | 7 | 97 | 394 | 136 | 441 | 4.57e-39 | 146 |
| Msa1082890 | AT5G36170.1 | 33.333 | 312 | 188 | 7 | 97 | 394 | 137 | 442 | 4.64e-39 | 146 |
| Msa1082890 | AT5G36170.3 | 31.696 | 224 | 136 | 4 | 97 | 307 | 137 | 356 | 7.66e-26 | 108 |
| Msa1082890 | AT5G36170.4 | 31.696 | 224 | 136 | 4 | 97 | 307 | 136 | 355 | 8.59e-26 | 108 |
Find 77 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCTCACTTCCGAATTTC+CGG | 0.193573 | 7_2:+83068131 | Msa1082890:CDS |
| AACAGATCCGGTGATATTTC+AGG | 0.234503 | 7_2:-83068263 | None:intergenic |
| TACTCTGACTGTGACGTTTC+TGG | 0.234667 | 7_2:-83068457 | None:intergenic |
| CAGTTTCCTTTCTTCCTCTA+TGG | 0.235024 | 7_2:-83069604 | None:intergenic |
| TTCTATAGATCCGGTGGTTC+AGG | 0.263634 | 7_2:+83070867 | Msa1082890:CDS |
| ACCGGATCTGTTAAATATAA+TGG | 0.276498 | 7_2:+83068274 | Msa1082890:CDS |
| CGTTTCGGCTAAGCTGAAAA+TGG | 0.288717 | 7_2:-83067932 | None:intergenic |
| CGGTTTCGTCTTTACTCTTC+CGG | 0.293909 | 7_2:+83068151 | Msa1082890:CDS |
| AGACAAAGACATGCTAAATA+TGG | 0.324341 | 7_2:+83069560 | Msa1082890:CDS |
| TCTTGATAATCTTATTAATC+AGG | 0.333963 | 7_2:+83068334 | Msa1082890:CDS |
| TAAAGACGAAACCGGAAATT+CGG | 0.355429 | 7_2:-83068142 | None:intergenic |
| ACATGATAATTACATACATT+TGG | 0.357990 | 7_2:+83072335 | Msa1082890:three_prime_UTR |
| TGCAGGCACTGGTGGGGAGG+AGG | 0.376498 | 7_2:+83069876 | Msa1082890:intron |
| GTTCAAAATTACCTTCTGTT+TGG | 0.381411 | 7_2:-83068545 | None:intergenic |
| TCCTTTCTTCCTCTATGGCC+TGG | 0.384019 | 7_2:-83069599 | None:intergenic |
| TACCATCTGCAGGAAATTGA+TGG | 0.386920 | 7_2:+83069507 | Msa1082890:intron |
| TGATGAAAGAGATTGCATTT+TGG | 0.392141 | 7_2:+83069668 | Msa1082890:CDS |
| TCCATTATATTTAACAGATC+CGG | 0.397333 | 7_2:-83068275 | None:intergenic |
| AGAATGACTCACATTCCAAC+TGG | 0.414670 | 7_2:+83070924 | Msa1082890:CDS |
| AAAATTGATTTCTATAGATC+CGG | 0.417665 | 7_2:+83070858 | Msa1082890:CDS |
| TTCCGTTGCGATTCTCCCAC+AGG | 0.420365 | 7_2:+83070511 | Msa1082890:CDS |
| CTTTCATCAGCATCATCCTT+AGG | 0.423814 | 7_2:-83069654 | None:intergenic |
| TCTTCTTCTTAAAGAAGAAA+TGG | 0.429187 | 7_2:+83072141 | Msa1082890:CDS |
| GCAACTTATTAATCAATTGA+AGG | 0.431077 | 7_2:+83068522 | Msa1082890:CDS |
| ACACAGTACCTTGAGAGCTT+TGG | 0.439461 | 7_2:-83071816 | None:intergenic |
| ATCTGATATGAAGGGATTCA+AGG | 0.449262 | 7_2:+83070071 | Msa1082890:CDS |
| CAAATTGTACAGATCGGTAG+TGG | 0.449947 | 7_2:+83071989 | Msa1082890:intron |
| TATAGCTCAATCTGATATGA+AGG | 0.454121 | 7_2:+83070062 | Msa1082890:CDS |
| CTTGAGGAAAGTTGTATGTT+CGG | 0.461744 | 7_2:-83072030 | None:intergenic |
| AGATGAGCGTTCTCAGCATA+TGG | 0.481437 | 7_2:+83070965 | Msa1082890:CDS |
| GAAATTCGGAAGTGAGAGTT+CGG | 0.492224 | 7_2:-83068128 | None:intergenic |
| GCTGAAGTCATTACTTCCTA+AGG | 0.497967 | 7_2:+83069638 | Msa1082890:CDS |
| GCCAGGCCATAGAGGAAGAA+AGG | 0.502842 | 7_2:+83069598 | Msa1082890:CDS |
| CGTTCTTCTACGTAATTCAG+TGG | 0.505051 | 7_2:+83072181 | Msa1082890:exon |
| TTATTCTGTTCGAGATGCTA+GGG | 0.509114 | 7_2:+83072274 | Msa1082890:three_prime_UTR |
| AGTATGCTCACAACAAAGGC+TGG | 0.515594 | 7_2:+83070022 | Msa1082890:CDS |
| GTTATTCTGTTCGAGATGCT+AGG | 0.520162 | 7_2:+83072273 | Msa1082890:three_prime_UTR |
| GAATAAAGCCAAAGCTCTCA+AGG | 0.523351 | 7_2:+83071808 | Msa1082890:intron |
| GATTCTCTGCTATTAAGCAC+AGG | 0.526234 | 7_2:+83068303 | Msa1082890:CDS |
| AGAGTATGCAAGAGCTAACA+AGG | 0.527690 | 7_2:+83068474 | Msa1082890:CDS |
| CAGTTCAGTGTGTGAAAGAG+AGG | 0.530767 | 7_2:+83068027 | Msa1082890:five_prime_UTR |
| GGCAACAGAGGAAATGAGCC+AGG | 0.537076 | 7_2:+83069581 | Msa1082890:CDS |
| GGAAATGAGCCAGGCCATAG+AGG | 0.537832 | 7_2:+83069590 | Msa1082890:CDS |
| ATGCTGACCACCTGAACCAC+CGG | 0.538846 | 7_2:-83070877 | None:intergenic |
| CGGAAGAGTAAAGACGAAAC+CGG | 0.540382 | 7_2:-83068150 | None:intergenic |
| GAGTGGAATTCATAGAGTAC+AGG | 0.544385 | 7_2:+83070365 | Msa1082890:CDS |
| GGGAAACTAAAATTTGAGAG+TGG | 0.547551 | 7_2:+83070348 | Msa1082890:CDS |
| TAATTACCTCATCAGCCTGT+GGG | 0.550923 | 7_2:-83070526 | None:intergenic |
| GTTCTTCTACGTAATTCAGT+GGG | 0.554789 | 7_2:+83072182 | Msa1082890:exon |
| AAGAAGAAGAGCATCAATGA+AGG | 0.557042 | 7_2:-83072128 | None:intergenic |
| CGTGTAACTGATCATAGAGT+TGG | 0.576242 | 7_2:+83072055 | Msa1082890:CDS |
| AAAGATATTCATTGCAAACA+AGG | 0.584561 | 7_2:-83069902 | None:intergenic |
| TCAATTGAAGGCCAAACAGA+AGG | 0.589477 | 7_2:+83068534 | Msa1082890:CDS |
| ATCAAAGCTTCGATCAGACC+AGG | 0.593666 | 7_2:+83071883 | Msa1082890:CDS |
| AATCGCAACGGAAACAGCAC+TGG | 0.594367 | 7_2:-83070501 | None:intergenic |
| AAATTGTACAGATCGGTAGT+GGG | 0.595903 | 7_2:+83071990 | Msa1082890:intron |
| TTAATTACCTCATCAGCCTG+TGG | 0.596975 | 7_2:-83070527 | None:intergenic |
| AACATAGACGATGTGATGCA+AGG | 0.597991 | 7_2:+83072091 | Msa1082890:CDS |
| CATGCTAAATATGGCAACAG+AGG | 0.599188 | 7_2:+83069569 | Msa1082890:CDS |
| TATAGATCCGGTGGTTCAGG+TGG | 0.600047 | 7_2:+83070870 | Msa1082890:CDS |
| CTGTTCGAGATGCTAGGGAG+AGG | 0.600282 | 7_2:+83072279 | Msa1082890:three_prime_UTR |
| ATAGCAATCACGATCCCAGT+TGG | 0.611104 | 7_2:-83070939 | None:intergenic |
| ATTGATTTCTATAGATCCGG+TGG | 0.614792 | 7_2:+83070861 | Msa1082890:CDS |
| ATAGCTCAATCTGATATGAA+GGG | 0.616699 | 7_2:+83070063 | Msa1082890:CDS |
| AGTGGAACCTGAAATATCAC+CGG | 0.627145 | 7_2:+83068256 | Msa1082890:CDS |
| GATTCTCCCACAGGCTGATG+AGG | 0.629066 | 7_2:+83070520 | Msa1082890:CDS |
| TGATCAGTTACACGGCCTTG+AGG | 0.631260 | 7_2:-83072046 | None:intergenic |
| CAACTCTATGATCAGTTACA+CGG | 0.632031 | 7_2:-83072054 | None:intergenic |
| CGAACATACAACTTTCCTCA+AGG | 0.648494 | 7_2:+83072031 | Msa1082890:CDS |
| ATTCTCTGCTATTAAGCACA+GGG | 0.649059 | 7_2:+83068304 | Msa1082890:CDS |
| AGCCTGTGGGAGAATCGCAA+CGG | 0.653810 | 7_2:-83070513 | None:intergenic |
| GAGAAGTATGCTCACAACAA+AGG | 0.658749 | 7_2:+83070018 | Msa1082890:CDS |
| GAATGACTCACATTCCAACT+GGG | 0.661685 | 7_2:+83070925 | Msa1082890:CDS |
| AATTGTACAGATCGGTAGTG+GGG | 0.669973 | 7_2:+83071991 | Msa1082890:intron |
| CAAAGGCTGGAAGTTTGATG+TGG | 0.672649 | 7_2:+83070035 | Msa1082890:CDS |
| GGAGTTTGGAATGCATACAA+TGG | 0.694935 | 7_2:-83072435 | None:intergenic |
| AAGGAGCTTCGAAAGCTCAG+TGG | 0.714146 | 7_2:+83068493 | Msa1082890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATAATAATGATTCAA+TGG | + | chr7_2:83068377-83068396 | Msa1082890:intron | 10.0% |
| !! | AAAAAAATAGTAAAAGAATA+AGG | + | chr7_2:83069447-83069466 | Msa1082890:intron | 10.0% |
| !! | TAGACAAAAAAAAAAAAAAA+CGG | - | chr7_2:83070253-83070272 | None:intergenic | 10.0% |
| !!! | ATAAATAGATTGATTCAAAT+CGG | - | chr7_2:83068184-83068203 | None:intergenic | 15.0% |
| !! | TAAATTTATCCTTCATATAA+GGG | + | chr7_2:83068943-83068962 | Msa1082890:intron | 15.0% |
| !! | TAAGTTAAATTTAAGCAATT+AGG | + | chr7_2:83069295-83069314 | Msa1082890:intron | 15.0% |
| !! | TTGTATAAACAAATGAAAAT+GGG | - | chr7_2:83069853-83069872 | None:intergenic | 15.0% |
| !! | ATTGTATAAACAAATGAAAA+TGG | - | chr7_2:83069854-83069873 | None:intergenic | 15.0% |
| !!! | AACTAACTCATAAAAATTTT+CGG | + | chr7_2:83071092-83071111 | Msa1082890:intron | 15.0% |
| !! | GTAAAAAAAATGAGGATTAA+TGG | + | chr7_2:83068049-83068068 | Msa1082890:exon | 20.0% |
| !!! | AATAATTTTGATAACAGAAG+TGG | + | chr7_2:83068238-83068257 | Msa1082890:intron | 20.0% |
| !!! | TCTTGATAATCTTATTAATC+AGG | + | chr7_2:83068334-83068353 | Msa1082890:CDS | 20.0% |
| !!! | TTAAAATTGAAAGTATTGTG+TGG | + | chr7_2:83068896-83068915 | Msa1082890:intron | 20.0% |
| !! | CTAAATTTATCCTTCATATA+AGG | + | chr7_2:83068942-83068961 | Msa1082890:intron | 20.0% |
| !! | AAATTTATCCTTCATATAAG+GGG | + | chr7_2:83068944-83068963 | Msa1082890:intron | 20.0% |
| !! | TTTGTTAAACATATATGCTT+AGG | - | chr7_2:83069017-83069036 | None:intergenic | 20.0% |
| !!! | GATTTATTTACCATGTATTT+TGG | + | chr7_2:83069223-83069242 | Msa1082890:intron | 20.0% |
| !!! | AATTCTAGAAATAAGATTGA+AGG | + | chr7_2:83069246-83069265 | Msa1082890:intron | 20.0% |
| !!! | ATTTGTTTATACAATTTTGC+AGG | + | chr7_2:83069859-83069878 | Msa1082890:intron | 20.0% |
| !!! | ATGAATATCTTTAAGATGTA+AGG | + | chr7_2:83069913-83069932 | Msa1082890:intron | 20.0% |
| !! | ACAAAAAAAAAAAAAAACGG+TGG | - | chr7_2:83070250-83070269 | None:intergenic | 20.0% |
| !! | ATAAAAAGAATGTCACTAAT+GGG | - | chr7_2:83070438-83070457 | None:intergenic | 20.0% |
| !! | AATAAAAAGAATGTCACTAA+TGG | - | chr7_2:83070439-83070458 | None:intergenic | 20.0% |
| !! | GTAATTAATAAATACCCTTA+TGG | + | chr7_2:83070542-83070561 | Msa1082890:intron | 20.0% |
| !!! | TTTTTATTTTATCGCTATTC+TGG | - | chr7_2:83070644-83070663 | None:intergenic | 20.0% |
| !! | GATTGTAAAAGATATTAAAC+AGG | - | chr7_2:83070754-83070773 | None:intergenic | 20.0% |
| !!! | AAAATTGATTTCTATAGATC+CGG | + | chr7_2:83070858-83070877 | Msa1082890:CDS | 20.0% |
| !!! | AAATTTTTATGAGTTAGTTG+TGG | - | chr7_2:83071091-83071110 | None:intergenic | 20.0% |
| !! | ACATGATAATTACATACATT+TGG | + | chr7_2:83072335-83072354 | Msa1082890:three_prime_UTR | 20.0% |
| ! | AAAGAGAGGTAAAAAAAATG+AGG | + | chr7_2:83068041-83068060 | Msa1082890:exon | 25.0% |
| ! | TCCATTATATTTAACAGATC+CGG | - | chr7_2:83068278-83068297 | None:intergenic | 25.0% |
| ! | GCAACTTATTAATCAATTGA+AGG | + | chr7_2:83068522-83068541 | Msa1082890:CDS | 25.0% |
| ! | TCATTTACTCAAATGATTAC+TGG | - | chr7_2:83068619-83068638 | None:intergenic | 25.0% |
| ! | ATGATATTCAGCTAATGATT+TGG | + | chr7_2:83068806-83068825 | Msa1082890:intron | 25.0% |
| ! | ATTCTTCAACAGAAAATAAG+TGG | - | chr7_2:83068862-83068881 | None:intergenic | 25.0% |
| ! | AATTTATCCTTCATATAAGG+GGG | + | chr7_2:83068945-83068964 | Msa1082890:intron | 25.0% |
| !!! | ATTTTTTTTCTGTCTTTAGG+TGG | + | chr7_2:83069173-83069192 | Msa1082890:intron | 25.0% |
| ! | ACATGGTAAATAAATCACAT+AGG | - | chr7_2:83069219-83069238 | None:intergenic | 25.0% |
| !!! | TTCTAGAATTCCAAAATACA+TGG | - | chr7_2:83069236-83069255 | None:intergenic | 25.0% |
| !! | ATTGAAGGTGTACATAATAT+TGG | + | chr7_2:83069261-83069280 | Msa1082890:intron | 25.0% |
| ! | TAAATTATCACTGTTGAAGA+TGG | + | chr7_2:83069704-83069723 | Msa1082890:intron | 25.0% |
| !! | TGGGAATAAAAAAAAGTGTA+GGG | - | chr7_2:83069834-83069853 | None:intergenic | 25.0% |
| !! | ATGGGAATAAAAAAAAGTGT+AGG | - | chr7_2:83069835-83069854 | None:intergenic | 25.0% |
| ! | AAAGATATTCATTGCAAACA+AGG | - | chr7_2:83069905-83069924 | None:intergenic | 25.0% |
| ! | CTATAAATGGAAGGAAAAAA+CGG | - | chr7_2:83070221-83070240 | None:intergenic | 25.0% |
| !!! | TACTTGATGTATTTTTGCTT+TGG | + | chr7_2:83070274-83070293 | Msa1082890:intron | 25.0% |
| ! | AAGAAGAGAAATATAGAACA+GGG | - | chr7_2:83071737-83071756 | None:intergenic | 25.0% |
| ! | AAAGAAGAGAAATATAGAAC+AGG | - | chr7_2:83071738-83071757 | None:intergenic | 25.0% |
| ! | AAGTTTCAAATTGTACAGAT+CGG | + | chr7_2:83071983-83072002 | Msa1082890:intron | 25.0% |
| ! | TCTTCTTCTTAAAGAAGAAA+TGG | + | chr7_2:83072141-83072160 | Msa1082890:CDS | 25.0% |
| ACCGGATCTGTTAAATATAA+TGG | + | chr7_2:83068274-83068293 | Msa1082890:CDS | 30.0% | |
| GTTCAAAATTACCTTCTGTT+TGG | - | chr7_2:83068548-83068567 | None:intergenic | 30.0% | |
| ! | GGTAATTTTGAACAGTGAAA+TGG | + | chr7_2:83068555-83068574 | Msa1082890:intron | 30.0% |
| ! | TTGACTGTAATCACATGTTT+TGG | + | chr7_2:83068648-83068667 | Msa1082890:intron | 30.0% |
| AAAATGTTGTGTAAGTGTCT+TGG | + | chr7_2:83068737-83068756 | Msa1082890:intron | 30.0% | |
| AAATGTTGTGTAAGTGTCTT+GGG | + | chr7_2:83068738-83068757 | Msa1082890:intron | 30.0% | |
| CTTTACCAAAATAAGATAGC+CGG | - | chr7_2:83068837-83068856 | None:intergenic | 30.0% | |
| !!! | GGCTATCTTATTTTGGTAAA+GGG | + | chr7_2:83068836-83068855 | Msa1082890:intron | 30.0% |
| ATTTATCCTTCATATAAGGG+GGG | + | chr7_2:83068946-83068965 | Msa1082890:intron | 30.0% | |
| AAGACAGAAAAAAAATGCCA+TGG | - | chr7_2:83069169-83069188 | None:intergenic | 30.0% | |
| !!! | GGCATTTTTTTTCTGTCTTT+AGG | + | chr7_2:83069170-83069189 | Msa1082890:intron | 30.0% |
| TAGTAAAAGAATAAGGCTGT+CGG | + | chr7_2:83069454-83069473 | Msa1082890:intron | 30.0% | |
| AGACAAAGACATGCTAAATA+TGG | + | chr7_2:83069560-83069579 | Msa1082890:CDS | 30.0% | |
| ! | TGATGAAAGAGATTGCATTT+TGG | + | chr7_2:83069668-83069687 | Msa1082890:CDS | 30.0% |
| AAAAAAGCAAAACGATCAAC+AGG | - | chr7_2:83069793-83069812 | None:intergenic | 30.0% | |
| TAAGGCTACACTTTATACTT+GGG | + | chr7_2:83069931-83069950 | Msa1082890:intron | 30.0% | |
| GATACTATCTTGCAAAATGT+AGG | + | chr7_2:83069992-83070011 | Msa1082890:intron | 30.0% | |
| TATAGCTCAATCTGATATGA+AGG | + | chr7_2:83070062-83070081 | Msa1082890:CDS | 30.0% | |
| ATAGCTCAATCTGATATGAA+GGG | + | chr7_2:83070063-83070082 | Msa1082890:CDS | 30.0% | |
| !!! | ATTTTAGGAGTTGGTGTTTT+TGG | + | chr7_2:83070327-83070346 | Msa1082890:CDS | 30.0% |
| !!! | TTTTAGGAGTTGGTGTTTTT+GGG | + | chr7_2:83070328-83070347 | Msa1082890:CDS | 30.0% |
| ATTCATAGATTTGATGTGAG+AGG | - | chr7_2:83070403-83070422 | None:intergenic | 30.0% | |
| ! | CATTCAAGTTTCATATCACA+AGG | - | chr7_2:83070575-83070594 | None:intergenic | 30.0% |
| GATAGAAGTTGCATTTGTAT+GGG | - | chr7_2:83070680-83070699 | None:intergenic | 30.0% | |
| AGATAGAAGTTGCATTTGTA+TGG | - | chr7_2:83070681-83070700 | None:intergenic | 30.0% | |
| AAATGCAACTTCTATCTTTC+TGG | + | chr7_2:83070684-83070703 | Msa1082890:intron | 30.0% | |
| AATGCAACTTCTATCTTTCT+GGG | + | chr7_2:83070685-83070704 | Msa1082890:intron | 30.0% | |
| ! | GTTGATGAATGGAATTTCAA+AGG | + | chr7_2:83070728-83070747 | Msa1082890:intron | 30.0% |
| TATGGTAAATGACTCCAAAA+TGG | + | chr7_2:83070983-83071002 | Msa1082890:intron | 30.0% | |
| !!! | ACATGTAAATTGTGCCATTT+TGG | - | chr7_2:83071000-83071019 | None:intergenic | 30.0% |
| TTGTAGCACTACTAATAACA+TGG | - | chr7_2:83071123-83071142 | None:intergenic | 30.0% | |
| TGTATACTTAAAGTGACACA+TGG | + | chr7_2:83071330-83071349 | Msa1082890:intron | 30.0% | |
| TTTGTGTTCATTCATATGTG+TGG | + | chr7_2:83071512-83071531 | Msa1082890:intron | 30.0% | |
| AATATCTTGGACAACTGAAA+CGG | - | chr7_2:83071641-83071660 | None:intergenic | 30.0% | |
| !!! | TTTTTTCCCTTCTTTTCTTC+TGG | + | chr7_2:83071954-83071973 | Msa1082890:intron | 30.0% |
| !!! | TCTAAGCTTTTTTCGCGTTT+CGG | - | chr7_2:83067950-83067969 | None:intergenic | 35.0% |
| TCAACAAAAATCTTCGACTG+AGG | - | chr7_2:83067994-83068013 | None:intergenic | 35.0% | |
| TAAAGACGAAACCGGAAATT+CGG | - | chr7_2:83068145-83068164 | None:intergenic | 35.0% | |
| GATTCAAATCGGAAAGTTAC+CGG | - | chr7_2:83068173-83068192 | None:intergenic | 35.0% | |
| ATTCTCTGCTATTAAGCACA+GGG | + | chr7_2:83068304-83068323 | Msa1082890:CDS | 35.0% | |
| !!! | CGGCTATCTTATTTTGGTAA+AGG | + | chr7_2:83068835-83068854 | Msa1082890:intron | 35.0% |
| TGTGTGGCTTAAGTTTAGAT+TGG | + | chr7_2:83068912-83068931 | Msa1082890:intron | 35.0% | |
| CCATGTCATGAACTAAATCT+TGG | - | chr7_2:83069080-83069099 | None:intergenic | 35.0% | |
| ! | CCAAGATTTAGTTCATGACA+TGG | + | chr7_2:83069077-83069096 | Msa1082890:intron | 35.0% |
| CTTACAATGCCGAAATTGTT+AGG | + | chr7_2:83069340-83069359 | Msa1082890:intron | 35.0% | |
| !!! | TTTTTTGTCTGTAGACGAAG+TGG | - | chr7_2:83069432-83069451 | None:intergenic | 35.0% |
| AGTAAAAGAATAAGGCTGTC+GGG | + | chr7_2:83069455-83069474 | Msa1082890:intron | 35.0% | |
| TCTTGAATATCACGTGATAC+AGG | + | chr7_2:83069480-83069499 | Msa1082890:intron | 35.0% | |
| ! | TGAAAGAGATTGCATTTTGG+AGG | + | chr7_2:83069671-83069690 | Msa1082890:CDS | 35.0% |
| ! | TTATACAATTTTGCAGGCAC+TGG | + | chr7_2:83069865-83069884 | Msa1082890:intron | 35.0% |
| GTAAGGCTACACTTTATACT+TGG | + | chr7_2:83069930-83069949 | Msa1082890:intron | 35.0% | |
| ATCTGATATGAAGGGATTCA+AGG | + | chr7_2:83070071-83070090 | Msa1082890:CDS | 35.0% | |
| !! | ATGACCTGTTTTTCAGTATG+TGG | + | chr7_2:83070117-83070136 | Msa1082890:intron | 35.0% |
| TTTCAGCATCCAACATTCAT+TGG | + | chr7_2:83070170-83070189 | Msa1082890:intron | 35.0% | |
| TAAATGGAAGGAAAAAACGG+TGG | - | chr7_2:83070218-83070237 | None:intergenic | 35.0% | |
| TGGTACACACTATAAATGGA+AGG | - | chr7_2:83070230-83070249 | None:intergenic | 35.0% | |
| GGGAAACTAAAATTTGAGAG+TGG | + | chr7_2:83070348-83070367 | Msa1082890:CDS | 35.0% | |
| ! | ATGAACACGTCCCAATTTTT+CGG | - | chr7_2:83070480-83070499 | None:intergenic | 35.0% |
| ATGCAACTTCTATCTTTCTG+GGG | + | chr7_2:83070686-83070705 | Msa1082890:intron | 35.0% | |
| !!! | TATCTTTCTGGGGTTTCTTT+TGG | + | chr7_2:83070696-83070715 | Msa1082890:intron | 35.0% |
| GGTTGACGTTCAGTTAAAAA+AGG | + | chr7_2:83070827-83070846 | Msa1082890:intron | 35.0% | |
| ! | ATTGATTTCTATAGATCCGG+TGG | + | chr7_2:83070861-83070880 | Msa1082890:CDS | 35.0% |
| TGACACATGGTTATTACTAG+TGG | + | chr7_2:83071343-83071362 | Msa1082890:intron | 35.0% | |
| GACACATGGTTATTACTAGT+GGG | + | chr7_2:83071344-83071363 | Msa1082890:intron | 35.0% | |
| !!! | TACAGACGTTTTTTGCCTTT+AGG | + | chr7_2:83071408-83071427 | Msa1082890:intron | 35.0% |
| AAAATTCTGTGCACATGGAT+AGG | + | chr7_2:83071555-83071574 | Msa1082890:intron | 35.0% | |
| AAATTCTGTGCACATGGATA+GGG | + | chr7_2:83071556-83071575 | Msa1082890:intron | 35.0% | |
| AAATGCCTCTTGCAATATCT+TGG | - | chr7_2:83071654-83071673 | None:intergenic | 35.0% | |
| AGGCATTTGACATAGTTGAT+GGG | + | chr7_2:83071666-83071685 | Msa1082890:intron | 35.0% | |
| CAAAATAAAGAAGTCATCGC+AGG | - | chr7_2:83071710-83071729 | None:intergenic | 35.0% | |
| !! | CTGCGATGACTTCTTTATTT+TGG | + | chr7_2:83071708-83071727 | Msa1082890:intron | 35.0% |
| TTAAAAGCAGAGGACACATA+AGG | - | chr7_2:83071777-83071796 | None:intergenic | 35.0% | |
| GAGCAGAAATTTAAAAGCAG+AGG | - | chr7_2:83071787-83071806 | None:intergenic | 35.0% | |
| ! | GATATCTCATCTTTTCTACC+TGG | - | chr7_2:83071904-83071923 | None:intergenic | 35.0% |
| GAGAATCCAGAAGAAAAGAA+GGG | - | chr7_2:83071963-83071982 | None:intergenic | 35.0% | |
| TGAGAATCCAGAAGAAAAGA+AGG | - | chr7_2:83071964-83071983 | None:intergenic | 35.0% | |
| AAATTGTACAGATCGGTAGT+GGG | + | chr7_2:83071990-83072009 | Msa1082890:intron | 35.0% | |
| CTTGAGGAAAGTTGTATGTT+CGG | - | chr7_2:83072033-83072052 | None:intergenic | 35.0% | |
| CAACTCTATGATCAGTTACA+CGG | - | chr7_2:83072057-83072076 | None:intergenic | 35.0% | |
| !! | AAGAAGAAGAGCATCAATGA+AGG | - | chr7_2:83072131-83072150 | None:intergenic | 35.0% |
| GTTCTTCTACGTAATTCAGT+GGG | + | chr7_2:83072182-83072201 | Msa1082890:exon | 35.0% | |
| TTATTCTGTTCGAGATGCTA+GGG | + | chr7_2:83072274-83072293 | Msa1082890:three_prime_UTR | 35.0% | |
| !!! | TCCGTTATCTTTTTCAGCTG+CGG | + | chr7_2:83068086-83068105 | Msa1082890:CDS | 40.0% |
| TCCGCAGCTGAAAAAGATAA+CGG | - | chr7_2:83068090-83068109 | None:intergenic | 40.0% | |
| GAAATTCGGAAGTGAGAGTT+CGG | - | chr7_2:83068131-83068150 | None:intergenic | 40.0% | |
| AACTCTCACTTCCGAATTTC+CGG | + | chr7_2:83068131-83068150 | Msa1082890:CDS | 40.0% | |
| AGTGGAACCTGAAATATCAC+CGG | + | chr7_2:83068256-83068275 | Msa1082890:CDS | 40.0% | |
| AACAGATCCGGTGATATTTC+AGG | - | chr7_2:83068266-83068285 | None:intergenic | 40.0% | |
| GATTCTCTGCTATTAAGCAC+AGG | + | chr7_2:83068303-83068322 | Msa1082890:CDS | 40.0% | |
| AGAGTATGCAAGAGCTAACA+AGG | + | chr7_2:83068474-83068493 | Msa1082890:CDS | 40.0% | |
| TCAATTGAAGGCCAAACAGA+AGG | + | chr7_2:83068534-83068553 | Msa1082890:CDS | 40.0% | |
| !!! | CACATGTTTTGGTGATGTGT+CGG | + | chr7_2:83068659-83068678 | Msa1082890:intron | 40.0% |
| GCAAAGACACTTCTAATCGT+AGG | - | chr7_2:83068713-83068732 | None:intergenic | 40.0% | |
| ! | AGCTAATGATTTGGCTACAC+CGG | + | chr7_2:83068815-83068834 | Msa1082890:intron | 40.0% |
| !! | CTACACCGGCTATCTTATTT+TGG | + | chr7_2:83068829-83068848 | Msa1082890:intron | 40.0% |
| GGTGAACACAAAAATGAAGC+AGG | - | chr7_2:83068996-83069015 | None:intergenic | 40.0% | |
| CAACTCCACTTTGTTGAAAC+AGG | + | chr7_2:83069128-83069147 | Msa1082890:intron | 40.0% | |
| AACAGCCTGTTTCAACAAAG+TGG | - | chr7_2:83069136-83069155 | None:intergenic | 40.0% | |
| !! | GGCTGTTGTTATTTCTTCCA+TGG | + | chr7_2:83069149-83069168 | Msa1082890:intron | 40.0% |
| CAATGCCGAAATTGTTAGGT+TGG | + | chr7_2:83069344-83069363 | Msa1082890:intron | 40.0% | |
| GGTGTCCAACCTAACAATTT+CGG | - | chr7_2:83069352-83069371 | None:intergenic | 40.0% | |
| ! | TACAGGTTTTTACCATCTGC+AGG | + | chr7_2:83069497-83069516 | Msa1082890:intron | 40.0% |
| TACCATCTGCAGGAAATTGA+TGG | + | chr7_2:83069507-83069526 | Msa1082890:intron | 40.0% | |
| CATGCTAAATATGGCAACAG+AGG | + | chr7_2:83069569-83069588 | Msa1082890:CDS | 40.0% | |
| CAGTTTCCTTTCTTCCTCTA+TGG | - | chr7_2:83069607-83069626 | None:intergenic | 40.0% | |
| GCTGAAGTCATTACTTCCTA+AGG | + | chr7_2:83069638-83069657 | Msa1082890:CDS | 40.0% | |
| CTTTCATCAGCATCATCCTT+AGG | - | chr7_2:83069657-83069676 | None:intergenic | 40.0% | |
| AATTTCTGCCAGCTTGTCTT+AGG | + | chr7_2:83069766-83069785 | Msa1082890:intron | 40.0% | |
| ! | GAGAAGTATGCTCACAACAA+AGG | + | chr7_2:83070018-83070037 | Msa1082890:CDS | 40.0% |
| ACAGCCACATACTGAAAAAC+AGG | - | chr7_2:83070124-83070143 | None:intergenic | 40.0% | |
| TGGTACACACTATAAACGGA+AGG | - | chr7_2:83070198-83070217 | None:intergenic | 40.0% | |
| ACGGTGGTACACACTATAAA+CGG | - | chr7_2:83070202-83070221 | None:intergenic | 40.0% | |
| ACGGTGGTACACACTATAAA+TGG | - | chr7_2:83070202-83070221 | None:intergenic | 40.0% | |
| !! | ACTGCAGCTATTTTAGGAGT+TGG | + | chr7_2:83070318-83070337 | Msa1082890:CDS | 40.0% |
| GAGTGGAATTCATAGAGTAC+AGG | + | chr7_2:83070365-83070384 | Msa1082890:CDS | 40.0% | |
| AGTTCCTGTGACCGAAAAAT+TGG | + | chr7_2:83070466-83070485 | Msa1082890:CDS | 40.0% | |
| GTTCCTGTGACCGAAAAATT+GGG | + | chr7_2:83070467-83070486 | Msa1082890:CDS | 40.0% | |
| TAATTACCTCATCAGCCTGT+GGG | - | chr7_2:83070529-83070548 | None:intergenic | 40.0% | |
| TTAATTACCTCATCAGCCTG+TGG | - | chr7_2:83070530-83070549 | None:intergenic | 40.0% | |
| !! | CACAAGGCATTGTTCCATAA+GGG | - | chr7_2:83070559-83070578 | None:intergenic | 40.0% |
| !! | TCACAAGGCATTGTTCCATA+AGG | - | chr7_2:83070560-83070579 | None:intergenic | 40.0% |
| !!! | GGGTTTCTTTTGGTTCTGTT+AGG | + | chr7_2:83070706-83070725 | Msa1082890:intron | 40.0% |
| !! | GGTTCTGTTAGGTTGATGAA+TGG | + | chr7_2:83070717-83070736 | Msa1082890:intron | 40.0% |
| TGAACGTCAACCTACAAATG+GGG | - | chr7_2:83070819-83070838 | None:intergenic | 40.0% | |
| CTGAACGTCAACCTACAAAT+GGG | - | chr7_2:83070820-83070839 | None:intergenic | 40.0% | |
| ACTGAACGTCAACCTACAAA+TGG | - | chr7_2:83070821-83070840 | None:intergenic | 40.0% | |
| AGAATGACTCACATTCCAAC+TGG | + | chr7_2:83070924-83070943 | Msa1082890:CDS | 40.0% | |
| GAATGACTCACATTCCAACT+GGG | + | chr7_2:83070925-83070944 | Msa1082890:CDS | 40.0% | |
| GTTCATGTCATTACGCCTAA+AGG | - | chr7_2:83071426-83071445 | None:intergenic | 40.0% | |
| GTACTACTCTTCATGTGCAT+TGG | + | chr7_2:83071488-83071507 | Msa1082890:intron | 40.0% | |
| TGACTCGAATCACTTACTGT+TGG | + | chr7_2:83071593-83071612 | Msa1082890:intron | 40.0% | |
| GACTCGAATCACTTACTGTT+GGG | + | chr7_2:83071594-83071613 | Msa1082890:intron | 40.0% | |
| CTGAAACGGCATATGCTTAA+TGG | - | chr7_2:83071627-83071646 | None:intergenic | 40.0% | |
| GTTGTCCAAGATATTGCAAG+AGG | + | chr7_2:83071646-83071665 | Msa1082890:intron | 40.0% | |
| ! | GAGGCATTTGACATAGTTGA+TGG | + | chr7_2:83071665-83071684 | Msa1082890:intron | 40.0% |
| ! | GGCATTTGACATAGTTGATG+GGG | + | chr7_2:83071667-83071686 | Msa1082890:intron | 40.0% |
| !! | GCATTTGACATAGTTGATGG+GGG | + | chr7_2:83071668-83071687 | Msa1082890:intron | 40.0% |
| GAATAAAGCCAAAGCTCTCA+AGG | + | chr7_2:83071808-83071827 | Msa1082890:intron | 40.0% | |
| CAAATTGTACAGATCGGTAG+TGG | + | chr7_2:83071989-83072008 | Msa1082890:intron | 40.0% | |
| AATTGTACAGATCGGTAGTG+GGG | + | chr7_2:83071991-83072010 | Msa1082890:intron | 40.0% | |
| CGAACATACAACTTTCCTCA+AGG | + | chr7_2:83072031-83072050 | Msa1082890:CDS | 40.0% | |
| CGTGTAACTGATCATAGAGT+TGG | + | chr7_2:83072055-83072074 | Msa1082890:CDS | 40.0% | |
| AACATAGACGATGTGATGCA+AGG | + | chr7_2:83072091-83072110 | Msa1082890:CDS | 40.0% | |
| CGTTCTTCTACGTAATTCAG+TGG | + | chr7_2:83072181-83072200 | Msa1082890:exon | 40.0% | |
| GTTATTCTGTTCGAGATGCT+AGG | + | chr7_2:83072273-83072292 | Msa1082890:three_prime_UTR | 40.0% | |
| CGTTTCGGCTAAGCTGAAAA+TGG | - | chr7_2:83067935-83067954 | None:intergenic | 45.0% | |
| CAGTTCAGTGTGTGAAAGAG+AGG | + | chr7_2:83068027-83068046 | Msa1082890:five_prime_UTR | 45.0% | |
| CGGAAGAGTAAAGACGAAAC+CGG | - | chr7_2:83068153-83068172 | None:intergenic | 45.0% | |
| CGGTTTCGTCTTTACTCTTC+CGG | + | chr7_2:83068151-83068170 | Msa1082890:CDS | 45.0% | |
| TACTCTGACTGTGACGTTTC+TGG | - | chr7_2:83068460-83068479 | None:intergenic | 45.0% | |
| TTGTGTAAGTGTCTTGGGAG+AGG | + | chr7_2:83068743-83068762 | Msa1082890:intron | 45.0% | |
| GATACTCACACAGAACTGCA+AGG | - | chr7_2:83069398-83069417 | None:intergenic | 45.0% | |
| CAGTTCTGTGTGAGTATCTG+TGG | + | chr7_2:83069400-83069419 | Msa1082890:intron | 45.0% | |
| AGCCATCAATTTCCTGCAGA+TGG | - | chr7_2:83069512-83069531 | None:intergenic | 45.0% | |
| !!! | TACAATTTTGCAGGCACTGG+TGG | + | chr7_2:83069868-83069887 | Msa1082890:intron | 45.0% |
| !!! | ACAATTTTGCAGGCACTGGT+GGG | + | chr7_2:83069869-83069888 | Msa1082890:intron | 45.0% |
| AGTATGCTCACAACAAAGGC+TGG | + | chr7_2:83070022-83070041 | Msa1082890:CDS | 45.0% | |
| CAAAGGCTGGAAGTTTGATG+TGG | + | chr7_2:83070035-83070054 | Msa1082890:CDS | 45.0% | |
| CGGAAGGTTCCAATGAATGT+TGG | - | chr7_2:83070182-83070201 | None:intergenic | 45.0% | |
| ! | GCTTTGGACCTCAATTTCTC+AGG | + | chr7_2:83070290-83070309 | Msa1082890:intron | 45.0% |
| TTGGACCTCAATTTCTCAGG+AGG | + | chr7_2:83070293-83070312 | Msa1082890:intron | 45.0% | |
| AGTAGCCTCCTGAGAAATTG+AGG | - | chr7_2:83070301-83070320 | None:intergenic | 45.0% | |
| !! | GAGGCTACTGCAGCTATTTT+AGG | + | chr7_2:83070312-83070331 | Msa1082890:CDS | 45.0% |
| TATGTCCATGCCCCATTTGT+AGG | + | chr7_2:83070806-83070825 | Msa1082890:intron | 45.0% | |
| TTCTATAGATCCGGTGGTTC+AGG | + | chr7_2:83070867-83070886 | Msa1082890:CDS | 45.0% | |
| ATAGCAATCACGATCCCAGT+TGG | - | chr7_2:83070942-83070961 | None:intergenic | 45.0% | |
| AGATGAGCGTTCTCAGCATA+TGG | + | chr7_2:83070965-83070984 | Msa1082890:CDS | 45.0% | |
| ! | CTGTGCTACTGTCTTCTACT+TGG | + | chr7_2:83071377-83071396 | Msa1082890:intron | 45.0% |
| GCGTCAAAATTCTGTGCACA+TGG | + | chr7_2:83071550-83071569 | Msa1082890:intron | 45.0% | |
| !! | GACATAGTTGATGGGGGATT+TGG | + | chr7_2:83071674-83071693 | Msa1082890:intron | 45.0% |
| ACACAGTACCTTGAGAGCTT+TGG | - | chr7_2:83071819-83071838 | None:intergenic | 45.0% | |
| ATCAAAGCTTCGATCAGACC+AGG | + | chr7_2:83071883-83071902 | Msa1082890:CDS | 45.0% | |
| AAGGAGCTTCGAAAGCTCAG+TGG | + | chr7_2:83068493-83068512 | Msa1082890:CDS | 50.0% | |
| GTGTCTGTGTTTGTGCTTGG+TGG | - | chr7_2:83068589-83068608 | None:intergenic | 50.0% | |
| GACGTGTCTGTGTTTGTGCT+TGG | - | chr7_2:83068592-83068611 | None:intergenic | 50.0% | |
| CTTCTAATCGTAGGCCTGTC+TGG | - | chr7_2:83068704-83068723 | None:intergenic | 50.0% | |
| CTCTCTCCCCCCTTATATGA+AGG | - | chr7_2:83068955-83068974 | None:intergenic | 50.0% | |
| TCCTTTCTTCCTCTATGGCC+TGG | - | chr7_2:83069602-83069621 | None:intergenic | 50.0% | |
| !! | TGCATTTTGGAGGTACGAGC+AGG | + | chr7_2:83069681-83069700 | Msa1082890:CDS | 50.0% |
| CAACAGGACCTAAGACAAGC+TGG | - | chr7_2:83069777-83069796 | None:intergenic | 50.0% | |
| !!! | CAATTTTGCAGGCACTGGTG+GGG | + | chr7_2:83069870-83069889 | Msa1082890:intron | 50.0% |
| !! | CGTCCCAATTTTTCGGTCAC+AGG | - | chr7_2:83070473-83070492 | None:intergenic | 50.0% |
| AATCGCAACGGAAACAGCAC+TGG | - | chr7_2:83070504-83070523 | None:intergenic | 50.0% | |
| GTCAACCTACAAATGGGGCA+TGG | - | chr7_2:83070814-83070833 | None:intergenic | 50.0% | |
| TATAGATCCGGTGGTTCAGG+TGG | + | chr7_2:83070870-83070889 | Msa1082890:CDS | 50.0% | |
| CACACTTCCGATCAGCTGAA+AGG | + | chr7_2:83071445-83071464 | Msa1082890:intron | 50.0% | |
| AAGGCAGGCAGCTTAGAACT+TGG | + | chr7_2:83071464-83071483 | Msa1082890:intron | 50.0% | |
| TGATCAGTTACACGGCCTTG+AGG | - | chr7_2:83072049-83072068 | None:intergenic | 50.0% | |
| GACACTGTCGAACACCAGAC+AGG | + | chr7_2:83068687-83068706 | Msa1082890:intron | 55.0% | |
| ! | TAGGTTGGACACCTTCACCC+AGG | + | chr7_2:83069359-83069378 | Msa1082890:intron | 55.0% |
| CCTTCACCCAGGTTCAAACC+CGG | + | chr7_2:83069370-83069389 | Msa1082890:intron | 55.0% | |
| CTTCACCCAGGTTCAAACCC+GGG | + | chr7_2:83069371-83069390 | Msa1082890:intron | 55.0% | |
| AAGGTCCCGGGTTTGAACCT+GGG | - | chr7_2:83069379-83069398 | None:intergenic | 55.0% | |
| ACACAGAACTGCAAGGTCCC+GGG | - | chr7_2:83069391-83069410 | None:intergenic | 55.0% | |
| CACACAGAACTGCAAGGTCC+CGG | - | chr7_2:83069392-83069411 | None:intergenic | 55.0% | |
| GGCAACAGAGGAAATGAGCC+AGG | + | chr7_2:83069581-83069600 | Msa1082890:CDS | 55.0% | |
| GGAAATGAGCCAGGCCATAG+AGG | + | chr7_2:83069590-83069609 | Msa1082890:CDS | 55.0% | |
| GCCAGGCCATAGAGGAAGAA+AGG | + | chr7_2:83069598-83069617 | Msa1082890:CDS | 55.0% | |
| TTCCGTTGCGATTCTCCCAC+AGG | + | chr7_2:83070511-83070530 | Msa1082890:CDS | 55.0% | |
| AGCCTGTGGGAGAATCGCAA+CGG | - | chr7_2:83070516-83070535 | None:intergenic | 55.0% | |
| GATTCTCCCACAGGCTGATG+AGG | + | chr7_2:83070520-83070539 | Msa1082890:CDS | 55.0% | |
| ATGCTGACCACCTGAACCAC+CGG | - | chr7_2:83070880-83070899 | None:intergenic | 55.0% | |
| CTTCCGATCAGCTGAAAGGC+AGG | + | chr7_2:83071449-83071468 | Msa1082890:intron | 55.0% | |
| CTGCCTGCCTTTCAGCTGAT+CGG | - | chr7_2:83071455-83071474 | None:intergenic | 55.0% | |
| CTGTTCGAGATGCTAGGGAG+AGG | + | chr7_2:83072279-83072298 | Msa1082890:three_prime_UTR | 55.0% | |
| CCGGGTTTGAACCTGGGTGA+AGG | - | chr7_2:83069373-83069392 | None:intergenic | 60.0% | |
| CAAGGTCCCGGGTTTGAACC+TGG | - | chr7_2:83069380-83069399 | None:intergenic | 60.0% | |
| !!! | TTTTGCAGGCACTGGTGGGG+AGG | + | chr7_2:83069873-83069892 | Msa1082890:intron | 60.0% |
| !! | TGCAGGCACTGGTGGGGAGG+AGG | + | chr7_2:83069876-83069895 | Msa1082890:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 83067904 | 83072454 | 83067904 | ID=Msa1082890;Name=Msa1082890 |
| chr7_2 | mRNA | 83067904 | 83072454 | 83067904 | ID=Msa1082890-mRNA-1;Parent=Msa1082890;Name=Msa1082890-mRNA-1;_AED=0.22;_eAED=0.22;_QI=154|1|1|1|1|1|11|259|409 |
| chr7_2 | exon | 83067904 | 83068172 | 83067904 | ID=Msa1082890-mRNA-1:exon:21711;Parent=Msa1082890-mRNA-1 |
| chr7_2 | exon | 83068255 | 83068355 | 83068255 | ID=Msa1082890-mRNA-1:exon:21712;Parent=Msa1082890-mRNA-1 |
| chr7_2 | exon | 83068457 | 83068555 | 83068457 | ID=Msa1082890-mRNA-1:exon:21713;Parent=Msa1082890-mRNA-1 |
| chr7_2 | exon | 83069519 | 83069702 | 83069519 | ID=Msa1082890-mRNA-1:exon:21714;Parent=Msa1082890-mRNA-1 |
| chr7_2 | exon | 83069881 | 83069929 | 83069881 | ID=Msa1082890-mRNA-1:exon:21715;Parent=Msa1082890-mRNA-1 |
| chr7_2 | exon | 83070014 | 83070092 | 83070014 | ID=Msa1082890-mRNA-1:exon:21716;Parent=Msa1082890-mRNA-1 |
| chr7_2 | exon | 83070312 | 83070386 | 83070312 | ID=Msa1082890-mRNA-1:exon:21717;Parent=Msa1082890-mRNA-1 |
| chr7_2 | exon | 83070464 | 83070541 | 83070464 | ID=Msa1082890-mRNA-1:exon:21718;Parent=Msa1082890-mRNA-1 |
| chr7_2 | exon | 83070828 | 83070986 | 83070828 | ID=Msa1082890-mRNA-1:exon:21719;Parent=Msa1082890-mRNA-1 |
| chr7_2 | exon | 83071809 | 83071904 | 83071809 | ID=Msa1082890-mRNA-1:exon:21720;Parent=Msa1082890-mRNA-1 |
| chr7_2 | exon | 83072001 | 83072454 | 83072001 | ID=Msa1082890-mRNA-1:exon:21721;Parent=Msa1082890-mRNA-1 |
| chr7_2 | five_prime_UTR | 83067904 | 83068057 | 83067904 | ID=Msa1082890-mRNA-1:five_prime_utr;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83068058 | 83068172 | 83068058 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83068255 | 83068355 | 83068255 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83068457 | 83068555 | 83068457 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83069519 | 83069702 | 83069519 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83069881 | 83069929 | 83069881 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83070014 | 83070092 | 83070014 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83070312 | 83070386 | 83070312 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83070464 | 83070541 | 83070464 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83070828 | 83070986 | 83070828 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83071809 | 83071904 | 83071809 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | CDS | 83072001 | 83072195 | 83072001 | ID=Msa1082890-mRNA-1:cds;Parent=Msa1082890-mRNA-1 |
| chr7_2 | three_prime_UTR | 83072196 | 83072454 | 83072196 | ID=Msa1082890-mRNA-1:three_prime_utr;Parent=Msa1082890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
