AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1424290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1424290 MtrunA17_Chr8g0392301 91.743 109 9 0 5 113 875 983 2.14e-63 214
Msa1424290 MtrunA17_Chr8g0392301 75.188 133 12 2 132 243 116 248 2.39e-54 189
Msa1424290 MtrunA17_Chr8g0377481 63.889 108 32 1 5 112 855 955 6.90e-39 144
Msa1424290 MtrunA17_Chr8g0377481 45.638 149 44 3 132 243 111 259 3.33e-27 110
Msa1424290 MtrunA17_Chr3g0122391 62.037 108 33 1 5 112 913 1012 3.46e-36 136
Msa1424290 MtrunA17_Chr3g0122391 47.297 148 41 3 132 242 159 306 4.80e-28 113
Msa1424290 MtrunA17_Chr5g0447641 56.410 117 42 2 4 113 1087 1201 4.09e-34 130
Msa1424290 MtrunA17_Chr5g0447641 45.223 157 50 4 125 246 332 487 2.78e-29 116
Msa1424290 MtrunA17_Chr2g0311191 67.442 86 18 3 174 258 22 98 4.64e-26 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1424290 AT2G01830.5 65.909 132 23 3 132 241 193 324 3.06e-43 157
Msa1424290 AT2G01830.5 68.807 109 27 1 5 113 948 1049 2.13e-42 155
Msa1424290 AT2G01830.1 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1424290 AT2G01830.1 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1424290 AT2G01830.4 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1424290 AT2G01830.4 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1424290 AT2G01830.6 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1424290 AT2G01830.6 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1424290 AT2G01830.3 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1424290 AT2G01830.3 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1424290 AT2G01830.2 65.909 132 23 3 132 241 204 335 3.90e-43 157
Msa1424290 AT2G01830.2 68.807 109 27 1 5 113 959 1060 2.32e-42 155
Msa1424290 AT1G27320.1 63.248 117 38 2 1 112 900 1016 9.34e-42 153
Msa1424290 AT1G27320.1 43.624 149 47 3 132 243 169 317 3.43e-25 105
Msa1424290 AT5G35750.1 63.248 117 38 2 5 116 1049 1165 6.82e-41 150
Msa1424290 AT5G35750.1 48.000 150 43 3 132 246 308 457 2.08e-30 120

Find 370 sgRNAs with CRISPR-Local

Find 719 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTGCACCTTTCTCTTTC+TGG 0.090871 tig0025676:-14126 None:intergenic
CCTTGAGCTGTCTAGAAATT+TGG 0.120024 tig0025676:+11300 Msa1424290:five_prime_UTR
ACCTTCTTCACCTCAGTTAT+TGG 0.154797 tig0025676:-17369 None:intergenic
CATTATTAAGTTTGTACTTT+TGG 0.162606 tig0025676:+12424 Msa1424290:five_prime_UTR
TAAATTCCGTTTACCTATAT+TGG 0.165693 tig0025676:+18780 Msa1424290:CDS
ACACTGCCAGTTATGAATTT+TGG 0.177356 tig0025676:-16589 None:intergenic
AGCTACTGGTAAAGCATTTC+TGG 0.184947 tig0025676:+15777 Msa1424290:five_prime_UTR
GCTGTGCTCGTTGGCTCTTT+TGG 0.262041 tig0025676:+20580 Msa1424290:three_prime_UTR
AGCTTGCCTTCAGCAAGTTT+TGG 0.267697 tig0025676:+18052 Msa1424290:five_prime_UTR
TGAGAACCCAACAACCTAAA+AGG 0.270552 tig0025676:-15805 None:intergenic
TGAGAACCCAACAACCTAAA+AGG 0.270552 tig0025676:-19783 None:intergenic
TTGAAGCAACTCGTCGAATT+CGG 0.272691 tig0025676:+18701 Msa1424290:CDS
AGTGAGAAGGAAAGAGGTTT+TGG 0.273718 tig0025676:+15171 Msa1424290:five_prime_UTR
AATAAATTTATCGGGCCTTT+TGG 0.277715 tig0025676:+20505 Msa1424290:three_prime_UTR
TCCAATCTGAAGCTCGAAAA+TGG 0.279042 tig0025676:+10563 Msa1424290:five_prime_UTR
AGCTCTTCTGTTGTTGGGTT+GGG 0.283441 tig0025676:-19855 None:intergenic
ATTGGTTGCCATACATGATT+AGG 0.284727 tig0025676:-16305 None:intergenic
AAGAATATTGTTCTTATAGA+AGG 0.285105 tig0025676:+12721 Msa1424290:five_prime_UTR
TCTGATTAAGATTAATGTTA+TGG 0.285743 tig0025676:+16617 Msa1424290:five_prime_UTR
CTAAGCGCGAGACTAATATT+TGG 0.289326 tig0025676:+20546 Msa1424290:three_prime_UTR
AGCTGGAGATATCAAGAAAT+TGG 0.296400 tig0025676:+13809 Msa1424290:five_prime_UTR
CAAAAGTACAAACTTAATAA+TGG 0.297310 tig0025676:-12423 None:intergenic
TGAATGCTTGGATATCTATT+AGG 0.305363 tig0025676:-12952 None:intergenic
AAAACTCTTCATCAGCAATT+AGG 0.316824 tig0025676:-17049 None:intergenic
TGAAGCAACTCGTCGAATTC+GGG 0.321951 tig0025676:+18702 Msa1424290:CDS
AAGGCATGAAAATTCTATCT+TGG 0.329216 tig0025676:-17176 None:intergenic
CCATTATCTCTTTCCTATAC+AGG 0.329932 tig0025676:+14196 Msa1424290:five_prime_UTR
GTCAAAATAAATAAATTTAT+CGG 0.334602 tig0025676:+20496 Msa1424290:three_prime_UTR
GTAACAAAGCACATATAAAA+AGG 0.337845 tig0025676:+14080 Msa1424290:five_prime_UTR
CTGATTAAGATTAATGTTAT+GGG 0.339688 tig0025676:+16618 Msa1424290:five_prime_UTR
GAGTGCAGAAGTAATGTAAA+AGG 0.340817 tig0025676:+13893 Msa1424290:five_prime_UTR
GGCTTTAAACCCTCTAAAAC+TGG 0.340964 tig0025676:-17412 None:intergenic
GTGTTAGCTGGTGTTGTAAT+GGG 0.347004 tig0025676:+14956 Msa1424290:intron
GATTTCCAATGATCGGCATT+GGG 0.348809 tig0025676:-20840 None:intergenic
AGCTCTTATGTTGTTGGGTT+GGG 0.355867 tig0025676:-15877 None:intergenic
TAGAAAATAGAGGTTTATAG+AGG 0.356406 tig0025676:-12811 None:intergenic
ATCTAGACTCCGACACGTTC+CGG 0.356468 tig0025676:+20451 Msa1424290:three_prime_UTR
ATGTGCTAAACTCCGCATTC+TGG 0.359839 tig0025676:-20363 None:intergenic
CTCTGAATCTGAACAGTCTT+AGG 0.361731 tig0025676:-11208 None:intergenic
CAAGTTTGATGCTTGCTTCA+AGG 0.362213 tig0025676:+18269 Msa1424290:CDS
CTAACAACCCTCTTACTCAT+TGG 0.363261 tig0025676:+14233 Msa1424290:five_prime_UTR
TGGAAATCAAAATTTATTGA+TGG 0.364877 tig0025676:+20855 Msa1424290:three_prime_UTR
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 tig0025676:-15853 None:intergenic
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 tig0025676:-19831 None:intergenic
AAACATCACCTTCTTTGTAT+TGG 0.366658 tig0025676:-16323 None:intergenic
CCTCGTCGCAATGGCGGTTC+CGG 0.368561 tig0025676:+13980 Msa1424290:five_prime_UTR
TATCCGTGTATCAGTCTATA+TGG 0.368758 tig0025676:+11364 Msa1424290:five_prime_UTR
TAATGAGCTCTTATGTTGTT+GGG 0.369742 tig0025676:-15882 None:intergenic
TTAATGAGCTCTTCTGTTGT+TGG 0.370178 tig0025676:-19861 None:intergenic
CTTAGGCCACTTGTCGAATC+TGG 0.370934 tig0025676:-11191 None:intergenic
TCTAATCCTATTTGATCTCC+TGG 0.371886 tig0025676:-12992 None:intergenic
AATTTACTTGGTCAACTTGC+TGG 0.372381 tig0025676:+16248 Msa1424290:five_prime_UTR
AACTTTCAGGTTGGGTCTGC+CGG 0.373589 tig0025676:-20470 None:intergenic
TTTAAAGCCGTTGTGGTTGA+TGG 0.373929 tig0025676:+17426 Msa1424290:five_prime_UTR
TTGACTCCAACTTTCAGGTT+GGG 0.377248 tig0025676:-20478 None:intergenic
AGTCGCAAACGCCATCAATA+AGG 0.379169 tig0025676:+17509 Msa1424290:five_prime_UTR
TTATTGCATCTACAGCAAAA+TGG 0.379494 tig0025676:+15135 Msa1424290:five_prime_UTR
GATCTTCAGTGTGCGGCAAC+TGG 0.379917 tig0025676:+17889 Msa1424290:five_prime_UTR
GAAACAATGTTTACCTGTAT+AGG 0.381243 tig0025676:-14209 None:intergenic
TAATGAGCTCTTCTGTTGTT+GGG 0.382581 tig0025676:-19860 None:intergenic
GCATGACGACTTGGATTTCA+TGG 0.383364 tig0025676:+20419 Msa1424290:three_prime_UTR
TTAATGAGCTCTTATGTTGT+TGG 0.383934 tig0025676:-15883 None:intergenic
TTGGTTGCCATACATGATTA+GGG 0.384098 tig0025676:-16304 None:intergenic
CTAGTCACAGCAGCTCTAAC+AGG 0.385909 tig0025676:-17453 None:intergenic
TCAAGCTTTCCATTTGTTGC+GGG 0.386642 tig0025676:-16901 None:intergenic
ATTTAATGGACCACACACTA+TGG 0.386966 tig0025676:+12582 Msa1424290:five_prime_UTR
TTTCACTTCGCAAATTTCAT+TGG 0.387078 tig0025676:+10642 Msa1424290:five_prime_UTR
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 tig0025676:+15559 Msa1424290:five_prime_UTR
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 tig0025676:+19542 Msa1424290:CDS
AACTTGTTGATGCTTCAATA+TGG 0.391748 tig0025676:-12892 None:intergenic
GAAAACCCAGGAGATCAAAT+AGG 0.395401 tig0025676:+12986 Msa1424290:five_prime_UTR
GCTACAAATTCAATTAATAA+AGG 0.396305 tig0025676:-12772 None:intergenic
TCTGCTGTCATGGCCAATAT+AGG 0.397938 tig0025676:-18793 None:intergenic
GAGTCTGAAAGGAGATTAAA+CGG 0.402628 tig0025676:-10484 None:intergenic
TTATGAACAAGTCACCTAGA+TGG 0.407870 tig0025676:+17112 Msa1424290:five_prime_UTR
CTTCTGTTGTTGGGTTGGGA+GGG 0.408038 tig0025676:-19851 None:intergenic
TGAACAATTCCTTCCTCAAA+AGG 0.408776 tig0025676:-18877 None:intergenic
TGGGTAGTCTTTGTGATCAA+AGG 0.412517 tig0025676:+15191 Msa1424290:five_prime_UTR
TAAGTGCCTAGCTGAACTAA+TGG 0.413074 tig0025676:+17263 Msa1424290:five_prime_UTR
AACTCGACTTCTAGAAACTA+TGG 0.415251 tig0025676:+17213 Msa1424290:five_prime_UTR
TGTGTCGAAGACACTGGAAT+TGG 0.420012 tig0025676:+17138 Msa1424290:five_prime_UTR
CACAGAACCCAATGAGTAAG+AGG 0.421143 tig0025676:-14241 None:intergenic
GTTGCTTTGTATTCTTCTGA+TGG 0.422242 tig0025676:+15102 Msa1424290:five_prime_UTR
CTCAAGCTTTCCATTTGTTG+CGG 0.424158 tig0025676:-16902 None:intergenic
ACCGAGCCAAAATTCATAAC+TGG 0.425503 tig0025676:+16583 Msa1424290:five_prime_UTR
AACTATGGTGGTACCGGCAT+TGG 0.427397 tig0025676:+17228 Msa1424290:five_prime_UTR
TAACAACCCTCTTACTCATT+GGG 0.429622 tig0025676:+14234 Msa1424290:five_prime_UTR
TGAAATTTGCGAAGTGAAAA+CGG 0.429932 tig0025676:-10638 None:intergenic
CCAATCGGATATTGAATGCT+TGG 0.430148 tig0025676:-12964 None:intergenic
AAAACCCCAATGCCGATCAT+TGG 0.430396 tig0025676:+20835 Msa1424290:three_prime_UTR
CCTGTATAGGAAAGAGATAA+TGG 0.430433 tig0025676:-14196 None:intergenic
CTGAAGGTGGTGGAGGGGAA+AGG 0.432104 tig0025676:+13427 Msa1424290:intron
ACCGGAGCTGAAGGTGGTGG+AGG 0.432907 tig0025676:+13420 Msa1424290:intron
TTTATAAGCCGGCCACAGAT+TGG 0.433400 tig0025676:+17300 Msa1424290:five_prime_UTR
AGGCATGAAAATTCTATCTT+GGG 0.434654 tig0025676:-17175 None:intergenic
GAGCTCTTCTGTTGTTGGGT+TGG 0.436168 tig0025676:-19856 None:intergenic
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 tig0025676:+15560 Msa1424290:five_prime_UTR
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 tig0025676:+19543 Msa1424290:CDS
GGCTTCTACGGGTAATGTTG+TGG 0.441520 tig0025676:+20395 Msa1424290:exon
AGTGTTAGCTGGTGTTGTAA+TGG 0.441960 tig0025676:+14955 Msa1424290:intron
TTAATTGGAGGTAGTTATGT+TGG 0.442968 tig0025676:+16194 Msa1424290:intron
TTTCAACATTTAGCATGTAC+TGG 0.443851 tig0025676:+11476 Msa1424290:five_prime_UTR
TATCAGTCTATATGGTTTGT+AGG 0.444423 tig0025676:+11372 Msa1424290:five_prime_UTR
AGCGGTCCTAGCCGTATATT+CGG 0.445484 tig0025676:-15436 None:intergenic
GTTGGTGGCGATGGCGGTTG+CGG 0.446160 tig0025676:+13519 Msa1424290:five_prime_UTR
AATAGAAAGCCCGCAACAAA+TGG 0.447886 tig0025676:+16892 Msa1424290:five_prime_UTR
GCTTCTACGGGTAATGTTGT+GGG 0.449565 tig0025676:+20396 Msa1424290:exon
TCCCTTGTGGAAAATTTACT+TGG 0.449628 tig0025676:+16236 Msa1424290:five_prime_UTR
TCTTCTGTTGTTGGGTTGGG+AGG 0.450263 tig0025676:-19852 None:intergenic
GCCACCACCACCTTCAGCTC+CGG 0.450368 tig0025676:-13067 None:intergenic
TGATTTCCAATGATCGGCAT+TGG 0.452162 tig0025676:-20841 None:intergenic
CAAAGAAACAGCCTTATTGA+TGG 0.453163 tig0025676:-17520 None:intergenic
TAAGCGCGAGACTAATATTT+GGG 0.454578 tig0025676:+20547 Msa1424290:three_prime_UTR
GAAGAAGTTGTGCATACATC+TGG 0.454754 tig0025676:+16946 Msa1424290:five_prime_UTR
GGATATTCAAATGCAAGAAA+AGG 0.455195 tig0025676:+18290 Msa1424290:CDS
CATACGGGGACTGGCTTCTA+CGG 0.455310 tig0025676:+20383 Msa1424290:CDS
ACTTGAACCTTCAGCTGAAA+AGG 0.457162 tig0025676:-12866 None:intergenic
AGATGTATGCACAACTTCTT+CGG 0.457816 tig0025676:-16944 None:intergenic
TCAAAATAAATAAATTTATC+GGG 0.458085 tig0025676:+20497 Msa1424290:three_prime_UTR
TTCAAAGTTCCAAGAACAAA+CGG 0.459844 tig0025676:+15024 Msa1424290:five_prime_UTR
GGGTAGTCTTTGTGATCAAA+GGG 0.462700 tig0025676:+15192 Msa1424290:five_prime_UTR
TCCAATAACTGAGGTGAAGA+AGG 0.463469 tig0025676:+17368 Msa1424290:five_prime_UTR
TCAAAGTTCCAAGAACAAAC+GGG 0.463568 tig0025676:+15025 Msa1424290:five_prime_UTR
AATAAGGCTGTTTCTTTGTG+TGG 0.465190 tig0025676:+17525 Msa1424290:five_prime_UTR
GCAAAATCAGCACCACCCTT+TGG 0.468680 tig0025676:+15000 Msa1424290:five_prime_UTR
GCAAAATCAGCACCACCCTT+TGG 0.468680 tig0025676:+19369 Msa1424290:CDS
TCTTATGTTGTTGGGTTGGG+AGG 0.468813 tig0025676:-15874 None:intergenic
GTGACGGCCACACCTGATAT+AGG 0.469948 tig0025676:+13920 Msa1424290:five_prime_UTR
CTTATGTTGTTGGGTTGGGA+GGG 0.470141 tig0025676:-15873 None:intergenic
ATGGATGAAGTTGGTGGCGA+TGG 0.473168 tig0025676:+13510 Msa1424290:five_prime_UTR
GTCAAATAAACTTTATAAGC+CGG 0.473292 tig0025676:+17289 Msa1424290:five_prime_UTR
CTTGGAACTTTGAAGCCAAA+GGG 0.475089 tig0025676:-15015 None:intergenic
TTTGACTCCAACTTTCAGGT+TGG 0.476261 tig0025676:-20479 None:intergenic
CAGAAGTAATGTAAAAGGTA+AGG 0.479588 tig0025676:+13898 Msa1424290:five_prime_UTR
GAGCTCTTATGTTGTTGGGT+TGG 0.479818 tig0025676:-15878 None:intergenic
AACATACTGAGAGCTCCTAC+TGG 0.482031 tig0025676:+19741 Msa1424290:CDS
AGATACCATTTGAAGAGACT+TGG 0.482768 tig0025676:+17474 Msa1424290:five_prime_UTR
ACTGATCCCCTAATCATGTA+TGG 0.483235 tig0025676:+16297 Msa1424290:five_prime_UTR
AGGACCGATGGAGTTGTAGA+TGG 0.484578 tig0025676:+13450 Msa1424290:five_prime_UTR
ACTATTGCTGCTGTGCTCGT+TGG 0.485368 tig0025676:+20571 Msa1424290:three_prime_UTR
CATGGGTTTGTGGAGAGGAC+GGG 0.486989 tig0025676:+17867 Msa1424290:five_prime_UTR
AGACGAACAAACTACCAATC+TGG 0.488070 tig0025676:+14150 Msa1424290:five_prime_UTR
TCTTCGACACAGACCCATCT+AGG 0.488222 tig0025676:-17126 None:intergenic
AAAATCCGCGGTAAATGAAA+AGG 0.489053 tig0025676:-17328 None:intergenic
CGAGTTAACTCTTTGTGCAT+AGG 0.489096 tig0025676:-15487 None:intergenic
TATGAACAAGTCACCTAGAT+GGG 0.489195 tig0025676:+17113 Msa1424290:five_prime_UTR
ATAAGGCTGTTTCTTTGTGT+GGG 0.489234 tig0025676:+17526 Msa1424290:five_prime_UTR
GAGTTATCTGCCTTCACAAA+AGG 0.489687 tig0025676:-17195 None:intergenic
TTGTAGATGGTGGTGGCGAA+AGG 0.493499 tig0025676:+13463 Msa1424290:five_prime_UTR
GAGAACCCAACAACCTAAAA+GGG 0.497618 tig0025676:-15804 None:intergenic
GAGAACCCAACAACCTAAAA+GGG 0.497618 tig0025676:-19782 None:intergenic
CCGGAGCTGAAGGTGGTGGA+GGG 0.497991 tig0025676:+13421 Msa1424290:intron
GTTGAAGTTGGCGGTGGCAC+CGG 0.498250 tig0025676:+13048 Msa1424290:five_prime_UTR
GTATCCCAAGTCTCTTCAAA+TGG 0.499078 tig0025676:-17479 None:intergenic
AAGTGCCTAGCTGAACTAAT+GGG 0.499182 tig0025676:+17264 Msa1424290:five_prime_UTR
TCATGGCCAATATAGGTAAA+CGG 0.499301 tig0025676:-18786 None:intergenic
TCTGAAAATATCACGCCAAA+AGG 0.500549 tig0025676:-20520 None:intergenic
CATCTAAAATGAGTTAAAGA+TGG 0.501537 tig0025676:-20774 None:intergenic
TTCAGATTCAGAGGAAGAAG+AGG 0.501652 tig0025676:+11218 Msa1424290:five_prime_UTR
TCTTGTAACTTTGAAGCCAA+AGG 0.501836 tig0025676:-19385 None:intergenic
GAGTTCGATGCGATGGCGAA+AGG 0.502422 tig0025676:+13013 Msa1424290:five_prime_UTR
TAAGAATATCTAGAAAATAG+AGG 0.503004 tig0025676:-12821 None:intergenic
AAGCTTGAGACTTATCGAAA+TGG 0.503401 tig0025676:+16916 Msa1424290:five_prime_UTR
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 tig0025676:+15554 Msa1424290:five_prime_UTR
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 tig0025676:+19537 Msa1424290:CDS
GGCGGTGGCACCGGAGCTGA+AGG 0.503621 tig0025676:+13057 Msa1424290:five_prime_UTR
CTTGTAACTTTGAAGCCAAA+GGG 0.504290 tig0025676:-19384 None:intergenic
TACTAAAGTGAGAAGGAAAG+AGG 0.504630 tig0025676:+15165 Msa1424290:five_prime_UTR
CTAATCCTATTTGATCTCCT+GGG 0.505911 tig0025676:-12991 None:intergenic
TTAAAGCCGTTGTGGTTGAT+GGG 0.511535 tig0025676:+17427 Msa1424290:five_prime_UTR
GGCAGACCCAACCTGAAAGT+TGG 0.512293 tig0025676:+20472 Msa1424290:three_prime_UTR
ATTGGAGGTAGTTATGTTGG+AGG 0.513150 tig0025676:+16197 Msa1424290:intron
TGAGCTATCTTGATGGATGT+AGG 0.513496 tig0025676:+12311 Msa1424290:five_prime_UTR
GATGGCGGTTGCGGTGGTGT+TGG 0.513633 tig0025676:+13528 Msa1424290:five_prime_UTR
AATGCGGAGTTTAGCACATA+CGG 0.514945 tig0025676:+20367 Msa1424290:CDS
TGCACCTGTCACATTTGCTC+AGG 0.517781 tig0025676:+15590 Msa1424290:five_prime_UTR
AGTTTAGCACATACGGGGAC+TGG 0.518029 tig0025676:+20374 Msa1424290:CDS
TTAACATGGTTTAATCATTG+AGG 0.522179 tig0025676:-12208 None:intergenic
TCATGGGTTTGTGGAGAGGA+CGG 0.522273 tig0025676:+17866 Msa1424290:five_prime_UTR
ATGAAGAGTGTTTGAAATGT+GGG 0.523905 tig0025676:+18833 Msa1424290:CDS
AACACTCTTCATATGTAGCA+TGG 0.525664 tig0025676:-18822 None:intergenic
GAAGCCACTGAGAACTAGTA+TGG 0.525821 tig0025676:+18025 Msa1424290:five_prime_UTR
GGAGGGGAAAGGAGGACCGA+TGG 0.526035 tig0025676:+13438 Msa1424290:five_prime_UTR
ATAATGATAGCTAGAGCTAC+TGG 0.526297 tig0025676:+15763 Msa1424290:five_prime_UTR
TTTAAAGACAATGGAAAGAG+AGG 0.526312 tig0025676:+15545 Msa1424290:five_prime_UTR
TTCAAATGCAAGAAAAGGAC+GGG 0.526629 tig0025676:+18295 Msa1424290:CDS
GGAGATGTACATGGTGGTTG+TGG 0.527779 tig0025676:+13555 Msa1424290:five_prime_UTR
GATGGAGAGGACGGCGAATG+AGG 0.528403 tig0025676:+18726 Msa1424290:CDS
GAGCTATCTTGATGGATGTA+GGG 0.529146 tig0025676:+12312 Msa1424290:five_prime_UTR
CAAATTGTAACAAATCTAGT+TGG 0.529505 tig0025676:+16650 Msa1424290:five_prime_UTR
ATGGATTACATCTGCTGTCA+TGG 0.530208 tig0025676:-18803 None:intergenic
CTATTGATATGATGTCTTGA+GGG 0.530839 tig0025676:+15634 Msa1424290:five_prime_UTR
AATCTAGTCCAGAAAGAGAA+AGG 0.531970 tig0025676:+14118 Msa1424290:five_prime_UTR
CCAAATTTCTAGACAGCTCA+AGG 0.532517 tig0025676:-11300 None:intergenic
CAAACTGAAGTTGAACCATC+AGG 0.532569 tig0025676:-18110 None:intergenic
AACAGGCAAGAAGAGACAGC+CGG 0.534721 tig0025676:+18076 Msa1424290:five_prime_UTR
CATCTACAGCAAAATGGATG+TGG 0.534726 tig0025676:+15141 Msa1424290:five_prime_UTR
TCAAGCACAAACCTGGTCAA+TGG 0.535029 tig0025676:-15291 None:intergenic
AAACCCTTCTGCCATTGACC+AGG 0.535215 tig0025676:+15280 Msa1424290:five_prime_UTR
GTTTCCTGAGCAAATGTGAC+AGG 0.535330 tig0025676:-15594 None:intergenic
TCATTCAAGCACATAGAGCC+CGG 0.535674 tig0025676:+15065 Msa1424290:five_prime_UTR
AGTCTGAGCATAGCCACGTT+GGG 0.538627 tig0025676:-16511 None:intergenic
AACTCGTCGAATTCGGGAGA+TGG 0.539466 tig0025676:+18708 Msa1424290:CDS
TGTAATCTCAAAACGCTAAG+TGG 0.539973 tig0025676:+16973 Msa1424290:five_prime_UTR
TCTTGGAACTTTGAAGCCAA+AGG 0.542220 tig0025676:-15016 None:intergenic
GGTTGCGGTGGTGTTGGCGA+TGG 0.542582 tig0025676:+13534 Msa1424290:five_prime_UTR
TGTTGTGGGGCATGACGACT+TGG 0.542613 tig0025676:+20410 Msa1424290:three_prime_UTR
TAGCTATCATTATGTTCTCT+CGG 0.543918 tig0025676:-15753 None:intergenic
TGTTTGAAATGTGGGATGGA+TGG 0.544805 tig0025676:+18841 Msa1424290:CDS
CTGTTCCCAAAACTTGCTGA+AGG 0.546763 tig0025676:-18058 None:intergenic
CGAGGACATCACGGATTTAG+CGG 0.548208 tig0025676:-13962 None:intergenic
TTGTTGGGTTCTCATCATCT+CGG 0.549046 tig0025676:+15814 Msa1424290:five_prime_UTR
TTGTTGGGTTCTCATCATCT+CGG 0.549046 tig0025676:+19792 Msa1424290:CDS
CGAGCTTCAGATTGGAAGAG+CGG 0.549147 tig0025676:-10556 None:intergenic
AGAAAATAGAGGTTTATAGA+GGG 0.552867 tig0025676:-12810 None:intergenic
ATCAGGGCAATGGATGAAGT+TGG 0.554409 tig0025676:+13501 Msa1424290:five_prime_UTR
GGAAGCTATTCGAGAAGAAG+AGG 0.554823 tig0025676:+11161 Msa1424290:intron
GTTAACAACTCTTTGTGCAT+AGG 0.556014 tig0025676:-19467 None:intergenic
GAGAAAGATTCATGGGTTTG+TGG 0.557247 tig0025676:+17857 Msa1424290:five_prime_UTR
GAGCTCATTAAAGCGACCAC+AGG 0.557353 tig0025676:+15895 Msa1424290:five_prime_UTR
CTATGCACAAAGAGTTAACT+CGG 0.558471 tig0025676:+15488 Msa1424290:five_prime_UTR
AGGTACTTCCAATCTGTGGC+CGG 0.558714 tig0025676:-17308 None:intergenic
TGTTGGAGGATCCTTTGATG+TGG 0.558720 tig0025676:+16211 Msa1424290:five_prime_UTR
CAGAGAAGAGAGCTAAAGAT+CGG 0.559209 tig0025676:-10607 None:intergenic
AGATTCATGGGTTTGTGGAG+AGG 0.561266 tig0025676:+17862 Msa1424290:five_prime_UTR
TATGGCAACCAATACAAAGA+AGG 0.561778 tig0025676:+16315 Msa1424290:five_prime_UTR
CCAAGCATTCAATATCCGAT+TGG 0.562018 tig0025676:+12964 Msa1424290:five_prime_UTR
TAGGCCACTCCACTCGGTAG+CGG 0.563486 tig0025676:-15468 None:intergenic
TAGGCCACTCCACTCGGTAG+CGG 0.563486 tig0025676:-19448 None:intergenic
GATACCATTTGAAGAGACTT+GGG 0.564437 tig0025676:+17475 Msa1424290:five_prime_UTR
ATACGGGGACTGGCTTCTAC+GGG 0.565321 tig0025676:+20384 Msa1424290:CDS
ACTGATACTCAAACCAATGC+CGG 0.566091 tig0025676:-17241 None:intergenic
TATGAAGAGTGTTTGAAATG+TGG 0.566182 tig0025676:+18832 Msa1424290:CDS
CGGAGCTGAAGGTGGTGGAG+GGG 0.566193 tig0025676:+13422 Msa1424290:intron
TCTAGAAACTATGGTGGTAC+CGG 0.567665 tig0025676:+17222 Msa1424290:five_prime_UTR
AGTCTGAAAGGAGATTAAAC+GGG 0.569635 tig0025676:-10483 None:intergenic
ATGACGGATGGTGTTGAAGT+TGG 0.569733 tig0025676:+13036 Msa1424290:five_prime_UTR
TGTGCATAGGCCACTCCACT+CGG 0.569929 tig0025676:-15474 None:intergenic
TGTGCATAGGCCACTCCACT+CGG 0.569929 tig0025676:-19454 None:intergenic
ATGGTGGTGGCGAAAGGAGA+AGG 0.570011 tig0025676:+13469 Msa1424290:five_prime_UTR
ACGGATGGTGTTGAAGTTGG+CGG 0.570486 tig0025676:+13039 Msa1424290:five_prime_UTR
TACTAATATTCGTAGCAAGA+AGG 0.570683 tig0025676:-17950 None:intergenic
ACAGGCAAGAAGAGACAGCC+GGG 0.572058 tig0025676:+18077 Msa1424290:five_prime_UTR
CTTTGATGTGGAGTCCCTTG+TGG 0.572959 tig0025676:+16223 Msa1424290:five_prime_UTR
CACAAGGGACTCCACATCAA+AGG 0.573882 tig0025676:-16222 None:intergenic
CCGTGATGTCCTCGTCGCAA+TGG 0.574492 tig0025676:+13971 Msa1424290:five_prime_UTR
GGTGGCGATGGCGGTTGCGG+TGG 0.575133 tig0025676:+13522 Msa1424290:five_prime_UTR
AGGATTAGAGTTCGATGCGA+TGG 0.575134 tig0025676:+13006 Msa1424290:five_prime_UTR
TATAAAGACAATGGAAAGAG+AGG 0.575171 tig0025676:+19528 Msa1424290:CDS
TAGAGGGTTTAAAGCCGTTG+TGG 0.575392 tig0025676:+17419 Msa1424290:five_prime_UTR
ATGCGGAGTTTAGCACATAC+GGG 0.576002 tig0025676:+20368 Msa1424290:CDS
GCAGAAGGGTTTCTGTAGGA+TGG 0.576930 tig0025676:-15269 None:intergenic
GACTGCTCAAGCGTGTGGGA+AGG 0.578235 tig0025676:+16530 Msa1424290:five_prime_UTR
CTCAGACTGCTCAAGCGTGT+GGG 0.579543 tig0025676:+16526 Msa1424290:five_prime_UTR
CTAAGACTGTTCAGATTCAG+AGG 0.581573 tig0025676:+11209 Msa1424290:five_prime_UTR
TAGAGTGGTTATAAAGACAA+TGG 0.582498 tig0025676:+19519 Msa1424290:CDS
TATTGTTCTTATAGAAGGTG+AGG 0.583167 tig0025676:+12726 Msa1424290:five_prime_UTR
CAAACCTGGTCAATGGCAGA+AGG 0.584600 tig0025676:-15284 None:intergenic
AAGGTGGTGGAGGGGAAAGG+AGG 0.586200 tig0025676:+13430 Msa1424290:intron
CGAATGGTGAATGTAGTGAA+AGG 0.586436 tig0025676:+18752 Msa1424290:CDS
ATAACTGAAACTAAATCGAT+CGG 0.586558 tig0025676:-14012 None:intergenic
TTGGGTCTGCCGGAACGTGT+CGG 0.588603 tig0025676:-20460 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.588844 tig0025676:+19425 Msa1424290:CDS
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 tig0025676:-15454 None:intergenic
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 tig0025676:-19434 None:intergenic
TGGGTCTGTGTCGAAGACAC+TGG 0.590108 tig0025676:+17132 Msa1424290:five_prime_UTR
CCACTGAGAACTAGTATGGT+GGG 0.590558 tig0025676:+18029 Msa1424290:five_prime_UTR
CAATGGAGAAAGAGTCTGAA+AGG 0.590894 tig0025676:-10495 None:intergenic
GCTCAGACTGCTCAAGCGTG+TGG 0.592158 tig0025676:+16525 Msa1424290:five_prime_UTR
AGCAAGCATCAAACTTGTGA+GGG 0.592861 tig0025676:-18263 None:intergenic
AATCGATCGGAGAGTTCTAC+CGG 0.594959 tig0025676:-13999 None:intergenic
GTTTGAGAAGCAGCATAGAG+TGG 0.595646 tig0025676:+15521 Msa1424290:five_prime_UTR
ATGCGATGGCGAAAGGATGA+CGG 0.597203 tig0025676:+13020 Msa1424290:five_prime_UTR
ATTCAAATGCAAGAAAAGGA+CGG 0.597672 tig0025676:+18294 Msa1424290:CDS
GAACACAGTTGAAACCAGAT+TGG 0.599444 tig0025676:-14164 None:intergenic
ACACTATGGCATGATAGAGT+TGG 0.601658 tig0025676:+12596 Msa1424290:five_prime_UTR
GCTGTCTAGAAATTTGGATG+TGG 0.601699 tig0025676:+11306 Msa1424290:five_prime_UTR
GTCGAATTCGGGAGATGGAG+AGG 0.601823 tig0025676:+18713 Msa1424290:CDS
CTTGAGACTTATCGAAATGG+AGG 0.602255 tig0025676:+16919 Msa1424290:five_prime_UTR
GTTTGAGAAGCAGCATAGAG+TGG 0.605018 tig0025676:+19504 Msa1424290:CDS
ATCTTGATGGATGTAGGGAA+AGG 0.606230 tig0025676:+12317 Msa1424290:five_prime_UTR
CTCTATCATGCCATAGTGTG+TGG 0.606806 tig0025676:-12592 None:intergenic
GCCACTGAGAACTAGTATGG+TGG 0.607785 tig0025676:+18028 Msa1424290:five_prime_UTR
GATTTAGCGGAGGCTTTGTG+CGG 0.608415 tig0025676:-13949 None:intergenic
ATTTGACCAGATTCGACAAG+TGG 0.608851 tig0025676:+11185 Msa1424290:five_prime_UTR
TTAAACCCTCTAAAACTGGA+TGG 0.609462 tig0025676:-17408 None:intergenic
TGTAAATATTCCAAAATCCG+CGG 0.609721 tig0025676:-17340 None:intergenic
CCGGGAAAAGAGATGCCTGA+TGG 0.609734 tig0025676:+18095 Msa1424290:five_prime_UTR
ACCACCATCTACAACTCCAT+CGG 0.611181 tig0025676:-13454 None:intergenic
AGGGCAATGGATGAAGTTGG+TGG 0.612947 tig0025676:+13504 Msa1424290:five_prime_UTR
AAGCAAGCATCAAACTTGTG+AGG 0.613257 tig0025676:-18264 None:intergenic
CAGTCTGAGCATAGCCACGT+TGG 0.613747 tig0025676:-16512 None:intergenic
TTTATAGAGGGAATCACGCG+TGG 0.614222 tig0025676:-12798 None:intergenic
TAGAGTTGGTGTGTGAATGT+AGG 0.614643 tig0025676:+12610 Msa1424290:five_prime_UTR
ATATAGACTGATACACGGAT+AGG 0.615163 tig0025676:-11362 None:intergenic
GATGGAGTTGTAGATGGTGG+TGG 0.615734 tig0025676:+13456 Msa1424290:five_prime_UTR
GTAGCAAGAAGGATCATTCG+AGG 0.616557 tig0025676:-17939 None:intergenic
TGATGTCCTCGTCGCAATGG+CGG 0.616829 tig0025676:+13974 Msa1424290:five_prime_UTR
CACTGTATCACTAAAACATG+CGG 0.616849 tig0025676:-17997 None:intergenic
CTTCTACGGGTAATGTTGTG+GGG 0.617417 tig0025676:+20397 Msa1424290:exon
ACATACTGAGAGCTCCTACT+GGG 0.618378 tig0025676:+19742 Msa1424290:CDS
TCTATTGATATGATGTCTTG+AGG 0.618511 tig0025676:+15633 Msa1424290:five_prime_UTR
CATGGTTTGATCAGTCTGCA+AGG 0.618845 tig0025676:-12246 None:intergenic
AGCTCATTAAAGCGACCACA+GGG 0.619676 tig0025676:+15896 Msa1424290:five_prime_UTR
ATGTCAATGGAAGTGACTGC+AGG 0.620608 tig0025676:+18168 Msa1424290:CDS
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 tig0025676:+15459 Msa1424290:five_prime_UTR
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 tig0025676:+19439 Msa1424290:CDS
ATTTCCAATGATCGGCATTG+GGG 0.621764 tig0025676:-20839 None:intergenic
GATGGTGTTGAAGTTGGCGG+TGG 0.623232 tig0025676:+13042 Msa1424290:five_prime_UTR
TGGTTGCCATACATGATTAG+GGG 0.623830 tig0025676:-16303 None:intergenic
AGAGTGTTTGAAATGTGGGA+TGG 0.624246 tig0025676:+18837 Msa1424290:CDS
TGCACAAAGAGTTGTTAACT+CGG 0.624623 tig0025676:+19471 Msa1424290:CDS
ATGTGGATACTAAAGTGAGA+AGG 0.624715 tig0025676:+15158 Msa1424290:five_prime_UTR
GAAGCTATTCGAGAAGAAGA+GGG 0.626506 tig0025676:+11162 Msa1424290:intron
AATGGCAGAAGGGTTTCTGT+AGG 0.630365 tig0025676:-15273 None:intergenic
ACTCTTCATCAGCAATTAGG+TGG 0.632287 tig0025676:-17046 None:intergenic
AATATCCGATTGGAAAACCC+AGG 0.633825 tig0025676:+12974 Msa1424290:five_prime_UTR
ATGGCAATTGAAGCTCGTTG+AGG 0.635193 tig0025676:+10582 Msa1424290:five_prime_UTR
GGTTAGGGATGAGTATGCAC+CGG 0.635635 tig0025676:+19558 Msa1424290:CDS
GATGAAGTTGGTGGCGATGG+CGG 0.635723 tig0025676:+13513 Msa1424290:five_prime_UTR
AAACCTGGTCAATGGCAGAA+GGG 0.635904 tig0025676:-15283 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.636060 tig0025676:+15445 Msa1424290:five_prime_UTR
TAATGTAAAAGGTAAGGTGA+CGG 0.636801 tig0025676:+13904 Msa1424290:five_prime_UTR
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 tig0025676:+15464 Msa1424290:five_prime_UTR
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 tig0025676:+19444 Msa1424290:CDS
CAAAATGATGAAGAATAGCA+AGG 0.637826 tig0025676:-20704 None:intergenic
AATTCGGGAGATGGAGAGGA+CGG 0.638289 tig0025676:+18717 Msa1424290:CDS
GCTTGGATATCTATTAGGCA+TGG 0.639413 tig0025676:-12947 None:intergenic
GGAACTTTGAAGCCAAAGGG+TGG 0.640019 tig0025676:-15012 None:intergenic
GAGTTAACTCGGAAAGAAAG+CGG 0.640585 tig0025676:+15499 Msa1424290:five_prime_UTR
TTGTTAACTCGGAAAGAGAG+CGG 0.640754 tig0025676:+19482 Msa1424290:CDS
AACAACCTAAAAGGGCTAGT+CGG 0.642277 tig0025676:-19774 None:intergenic
GGGTTCTCATCATCTCGGTG+TGG 0.642737 tig0025676:+15819 Msa1424290:five_prime_UTR
GGGTTCTCATCATCTCGGTG+TGG 0.642737 tig0025676:+19797 Msa1424290:CDS
AAAATGGTGCTTCCAGCACA+GGG 0.643044 tig0025676:+17550 Msa1424290:five_prime_UTR
GACCGCCCATTAGTTCAGCT+AGG 0.643366 tig0025676:-17269 None:intergenic
GTAACTTTGAAGCCAAAGGG+TGG 0.650789 tig0025676:-19381 None:intergenic
GAAGTTGTGCATACATCTGG+CGG 0.651844 tig0025676:+16949 Msa1424290:five_prime_UTR
AGTCAATAACACAATTAACA+TGG 0.652172 tig0025676:-12264 None:intergenic
CCATTGCGACGAGGACATCA+CGG 0.652805 tig0025676:-13971 None:intergenic
TGCGGCAACTGGAAACAGAA+CGG 0.653414 tig0025676:+17900 Msa1424290:five_prime_UTR
ACGGCGAATGAGGAGACGAA+TGG 0.653590 tig0025676:+18736 Msa1424290:CDS
GCGAGATATTAGAAAAGCTG+AGG 0.654014 tig0025676:+13577 Msa1424290:five_prime_UTR
ATAATGCAGTTCAATAAGCG+AGG 0.657195 tig0025676:+16838 Msa1424290:intron
ACATCATATCAATAGACTCA+AGG 0.658508 tig0025676:-15626 None:intergenic
GTCGGAACAAACTTCCCAGT+AGG 0.660421 tig0025676:-19756 None:intergenic
TACAAAGAATCCAATAACTG+AGG 0.662560 tig0025676:+17359 Msa1424290:five_prime_UTR
AGGACGGGATCTTCAGTGTG+CGG 0.664290 tig0025676:+17882 Msa1424290:five_prime_UTR
GAAAAGGTACTTCCAATCTG+TGG 0.664912 tig0025676:-17312 None:intergenic
CCGGAACCGCCATTGCGACG+AGG 0.668033 tig0025676:-13980 None:intergenic
GTTGGCGATGGAGATGTACA+TGG 0.668187 tig0025676:+13546 Msa1424290:five_prime_UTR
GATGTGAAGTGTGCAGACAG+CGG 0.669637 tig0025676:+18213 Msa1424290:CDS
ACAGAACCCAATGAGTAAGA+GGG 0.670609 tig0025676:-14240 None:intergenic
TCAGTTTGAAGCCTTCTGTG+CGG 0.678971 tig0025676:+18125 Msa1424290:five_prime_UTR
TCGACTTCTAGAAACTATGG+TGG 0.680954 tig0025676:+17216 Msa1424290:five_prime_UTR
GGACATCACGGATTTAGCGG+AGG 0.683899 tig0025676:-13959 None:intergenic
CAAAGTTCCAAGAACAAACG+GGG 0.685277 tig0025676:+15026 Msa1424290:five_prime_UTR
TTATAGAGGGAATCACGCGT+GGG 0.688730 tig0025676:-12797 None:intergenic
ACCGATGGAGTTGTAGATGG+TGG 0.690749 tig0025676:+13453 Msa1424290:five_prime_UTR
GGATGGCTAGAGCATGAACA+TGG 0.693348 tig0025676:-15252 None:intergenic
TGTCAGGGAAACATTGCTGA+AGG 0.696155 tig0025676:+20314 Msa1424290:intron
TGCCTAGCTGAACTAATGGG+CGG 0.697388 tig0025676:+17267 Msa1424290:five_prime_UTR
AGGTTTCCCATCAACCACAA+CGG 0.697501 tig0025676:-17433 None:intergenic
ACAAATGCAATCATTCAACA+AGG 0.705448 tig0025676:-12369 None:intergenic
AAACCATATAGACTGATACA+CGG 0.717551 tig0025676:-11367 None:intergenic
TGCGGAGTTTAGCACATACG+GGG 0.722432 tig0025676:+20369 Msa1424290:CDS
CCCACCATACTAGTTCTCAG+TGG 0.729319 tig0025676:-18029 None:intergenic
GAATTGAACTCAACCCAACG+TGG 0.736332 tig0025676:+16498 Msa1424290:five_prime_UTR
GATGGCGAAAGGATGACGGA+TGG 0.756508 tig0025676:+13024 Msa1424290:five_prime_UTR
GGCGATGGAGATGTACATGG+TGG 0.786952 tig0025676:+13549 Msa1424290:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAATTTTTTTTTTTTT+TGG + tig0025676:18336-18355 Msa1424290:intron 0.0%
!!! TGATTAATTAACTTTTTAAT+TGG + tig0025676:16179-16198 Msa1424290:intron 10.0%
!! ATTAAATGAGTTAAAATATT+TGG + tig0025676:17797-17816 Msa1424290:intron 10.0%
!! GTCAAAATAAATAAATTTAT+CGG + tig0025676:20496-20515 Msa1424290:three_prime_UTR 10.0%
!! TCAAAATAAATAAATTTATC+GGG + tig0025676:20497-20516 Msa1424290:three_prime_UTR 10.0%
!!! ACACAAAGTTTTTTATATAT+AGG - tig0025676:14860-14879 None:intergenic 15.0%
!!! TTAATTAACTTTTTAATTGG+AGG + tig0025676:16182-16201 Msa1424290:intron 15.0%
!!! TTTTTAGTGAATTAAAGTTA+AGG + tig0025676:17614-17633 Msa1424290:intron 15.0%
!!! ATAAAAGTATCTGAAATTTT+AGG + tig0025676:19167-19186 Msa1424290:intron 15.0%
!! ATCACTATCATTTATTAAAA+TGG - tig0025676:20241-20260 None:intergenic 15.0%
!! AAAAACTTCAGTTATTTATT+TGG - tig0025676:20655-20674 None:intergenic 15.0%
!! AATTGAATATAGAATCCTTA+GGG - tig0025676:10780-10799 None:intergenic 20.0%
!! ACTTATTTGAACTTATTTAG+TGG + tig0025676:10945-10964 Msa1424290:intron 20.0%
!!! AAGTTTTTACACAATTAACA+TGG - tig0025676:11567-11586 None:intergenic 20.0%
!! AAAAATTCAGAGAATTTCAA+TGG - tig0025676:12066-12085 None:intergenic 20.0%
!! ATAAAAGGAAATTGAGTTTA+TGG - tig0025676:12108-12127 None:intergenic 20.0%
!!! AAGTTTTAACACAATTAACA+TGG - tig0025676:12225-12244 None:intergenic 20.0%
!!! CAAAAGTACAAACTTAATAA+TGG - tig0025676:12426-12445 None:intergenic 20.0%
!!! CATTATTAAGTTTGTACTTT+TGG + tig0025676:12424-12443 Msa1424290:five_prime_UTR 20.0%
!! AAGAATATTGTTCTTATAGA+AGG + tig0025676:12721-12740 Msa1424290:five_prime_UTR 20.0%
!! GCTACAAATTCAATTAATAA+AGG - tig0025676:12775-12794 None:intergenic 20.0%
!! TAAGAATATCTAGAAAATAG+AGG - tig0025676:12824-12843 None:intergenic 20.0%
!! TCATTAAAATGCACAAATAT+TGG + tig0025676:14409-14428 Msa1424290:intron 20.0%
!! CAATAAAAAAAGGAAAGAAA+GGG - tig0025676:14540-14559 None:intergenic 20.0%
!! ACAATAAAAAAAGGAAAGAA+AGG - tig0025676:14541-14560 None:intergenic 20.0%
!! GAAAATTCGACAATAAAAAA+AGG - tig0025676:14550-14569 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG + tig0025676:14566-14585 Msa1424290:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG + tig0025676:14881-14900 Msa1424290:intron 20.0%
!! TCTGATTAAGATTAATGTTA+TGG + tig0025676:16617-16636 Msa1424290:five_prime_UTR 20.0%
!! CTGATTAAGATTAATGTTAT+GGG + tig0025676:16618-16637 Msa1424290:five_prime_UTR 20.0%
!! TTAGTAATGCAAATAACTTA+GGG - tig0025676:16716-16735 None:intergenic 20.0%
!! ATTAGTAATGCAAATAACTT+AGG - tig0025676:16717-16736 None:intergenic 20.0%
!! CAATGTCATTAATTACAAAA+AGG - tig0025676:17591-17610 None:intergenic 20.0%
!! TCTCAACAAAAATAATATCA+GGG - tig0025676:17841-17860 None:intergenic 20.0%
!! TTCTCAACAAAAATAATATC+AGG - tig0025676:17842-17861 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG + tig0025676:14566-14585 Msa1424290:intron 20.0%
!!! ACTGTTAATTGAGTATTTTT+TGG + tig0025676:19246-19265 Msa1424290:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG + tig0025676:14881-14900 Msa1424290:intron 20.0%
!! TGTGTTTAGTATAAAAATCT+TGG + tig0025676:19982-20001 Msa1424290:intron 20.0%
!! GTGTTTAGTATAAAAATCTT+GGG + tig0025676:19983-20002 Msa1424290:intron 20.0%
!!! AACTGAAGTTTTTTAAGTAA+CGG + tig0025676:20662-20681 Msa1424290:three_prime_UTR 20.0%
!!! AAATTTTGATTTCCAATGAT+CGG - tig0025676:20850-20869 None:intergenic 20.0%
!! TGGAAATCAAAATTTATTGA+TGG + tig0025676:20855-20874 Msa1424290:three_prime_UTR 20.0%
! CAATTGAATATAGAATCCTT+AGG - tig0025676:10781-10800 None:intergenic 25.0%
! CATGATACAAAAACAGAATT+TGG - tig0025676:10836-10855 None:intergenic 25.0%
! ATCAAATCTAATGTCCTTAT+TGG + tig0025676:11123-11142 Msa1424290:intron 25.0%
! TTAACATGGTTTAATCATTG+AGG - tig0025676:11553-11572 None:intergenic 25.0%
! TATTTAGCAATTGATCTGTA+TGG - tig0025676:11609-11628 None:intergenic 25.0%
! TACAGATCAATTGCTAAATA+TGG + tig0025676:11609-11628 Msa1424290:intron 25.0%
!! ATACTTCTAAAGAAAACACT+TGG - tig0025676:11652-11671 None:intergenic 25.0%
! AAAAACTACCAAAGGAAATA+AGG - tig0025676:11715-11734 None:intergenic 25.0%
!!! TATTTCCTTTGGTAGTTTTT+TGG + tig0025676:11715-11734 Msa1424290:intron 25.0%
! TTAAACCAAAAAACTACCAA+AGG - tig0025676:11723-11742 None:intergenic 25.0%
! AAATTTGTACTACTTTGCTA+TGG + tig0025676:11915-11934 Msa1424290:intron 25.0%
! ATTATCACTAAGTGAATCAT+TGG - tig0025676:11942-11961 None:intergenic 25.0%
! TCAATTTCCTGATTTAATTG+AGG - tig0025676:12037-12056 None:intergenic 25.0%
! ATGTTGAAATGCTAGATAAA+AGG - tig0025676:12123-12142 None:intergenic 25.0%
! TTAACATGGTTTAATCATTG+AGG - tig0025676:11553-11572 None:intergenic 25.0%
! AGTCAATAACACAATTAACA+TGG - tig0025676:12267-12286 None:intergenic 25.0%
!!! TGTGTTATTGACTATGTTTT+TGG + tig0025676:12274-12293 Msa1424290:five_prime_UTR 25.0%
! AGCAAACGACAAAAATTTAA+TGG + tig0025676:12568-12587 Msa1424290:five_prime_UTR 25.0%
!!! TAGTTGTTTTTGTGAATCAA+AGG + tig0025676:12660-12679 Msa1424290:five_prime_UTR 25.0%
! AGAAAATAGAGGTTTATAGA+GGG - tig0025676:12813-12832 None:intergenic 25.0%
! TAGAAAATAGAGGTTTATAG+AGG - tig0025676:12814-12833 None:intergenic 25.0%
! TGAAAATACAATTAGTGTGA+TGG - tig0025676:13757-13776 None:intergenic 25.0%
! ATAACTGAAACTAAATCGAT+CGG - tig0025676:14015-14034 None:intergenic 25.0%
! GTAACAAAGCACATATAAAA+AGG + tig0025676:14080-14099 Msa1424290:five_prime_UTR 25.0%
!!! GTGTTTTTTAAGTCAATGTT+TGG + tig0025676:14277-14296 Msa1424290:five_prime_UTR 25.0%
! AGAGAGAGAATTAAAAAGAA+GGG - tig0025676:14515-14534 None:intergenic 25.0%
! AAGAGAGAGAATTAAAAAGA+AGG - tig0025676:14516-14535 None:intergenic 25.0%
!!! GATACTTTACTTTTATCTGA+TGG - tig0025676:14792-14811 None:intergenic 25.0%
!!! AGTAAAGTATCTGAGATTTT+AGG + tig0025676:14801-14820 Msa1424290:intron 25.0%
!!! GCTGTTAATTGAGTATTTTT+TGG + tig0025676:14880-14899 Msa1424290:intron 25.0%
! TATGTTTCATGAGTAATTAG+AGG + tig0025676:15971-15990 Msa1424290:intron 25.0%
! GTGTTTGGTATAAAAATCTT+AGG + tig0025676:16003-16022 Msa1424290:intron 25.0%
! CAAATTGTAACAAATCTAGT+TGG + tig0025676:16650-16669 Msa1424290:five_prime_UTR 25.0%
! TACTAATATGCATGTTATGT+TGG + tig0025676:16730-16749 Msa1424290:intron 25.0%
! TTGTTCATAAAAATCATTCG+AGG - tig0025676:17102-17121 None:intergenic 25.0%
! GTCAAATAAACTTTATAAGC+CGG + tig0025676:17289-17308 Msa1424290:five_prime_UTR 25.0%
! TGAGTTAAAATATTTGGTTG+TGG + tig0025676:17803-17822 Msa1424290:intron 25.0%
!! TTTTTGTTGAGAAAGATTCA+TGG + tig0025676:17849-17868 Msa1424290:five_prime_UTR 25.0%
!! TTTTGTTGAGAAAGATTCAT+GGG + tig0025676:17850-17869 Msa1424290:five_prime_UTR 25.0%
!!! AGTTTTTTCTAAATCAGCAA+AGG - tig0025676:18388-18407 None:intergenic 25.0%
! TATCATTGAATTTATCAGCA+AGG - tig0025676:18444-18463 None:intergenic 25.0%
! ACAAACATAACATGTATAGA+GGG - tig0025676:18610-18629 None:intergenic 25.0%
! AACAAACATAACATGTATAG+AGG - tig0025676:18611-18630 None:intergenic 25.0%
!! CATGTACTTACATTATTTTC+AGG + tig0025676:18677-18696 Msa1424290:intron 25.0%
! TAAATTCCGTTTACCTATAT+TGG + tig0025676:18780-18799 Msa1424290:CDS 25.0%
!!! TTGTTTTGTATGAGCATATA+TGG + tig0025676:18920-18939 Msa1424290:intron 25.0%
!! TGTATTAGTTAGTATTGAAC+TGG + tig0025676:18952-18971 Msa1424290:intron 25.0%
! AATAAAGAGAAAAGTGACAA+AGG - tig0025676:19005-19024 None:intergenic 25.0%
!!! GCACGAACTTTTTTATATAT+AGG - tig0025676:19226-19245 None:intergenic 25.0%
! TGTTTCATATGAGTAATTAG+AGG + tig0025676:19951-19970 Msa1424290:intron 25.0%
!!! TGATGTTTCTTTTTTATGTC+TGG + tig0025676:20135-20154 Msa1424290:intron 25.0%
!! CTGAATGTTGACATTTTTAT+TGG + tig0025676:20291-20310 Msa1424290:intron 25.0%
!!! GTACTTAATTTTTCAGCTAT+AGG - tig0025676:20744-20763 None:intergenic 25.0%
!! CATCTAAAATGAGTTAAAGA+TGG - tig0025676:20777-20796 None:intergenic 25.0%
!! CATCTTTAACTCATTTTAGA+TGG + tig0025676:20775-20794 Msa1424290:three_prime_UTR 25.0%
TGAAATTTGCGAAGTGAAAA+CGG - tig0025676:10641-10660 None:intergenic 30.0%
TTTCACTTCGCAAATTTCAT+TGG + tig0025676:10642-10661 Msa1424290:five_prime_UTR 30.0%
!! TATCTGATATTTGCTATCTC+AGG + tig0025676:10899-10918 Msa1424290:intron 30.0%
TAAACTGAAACAATCCAAAC+AGG - tig0025676:10926-10945 None:intergenic 30.0%
!! TAGTGGAATAAGTTTTGTAG+TGG + tig0025676:10962-10981 Msa1424290:intron 30.0%
! TGACTTATTTGACTTATCTC+AGG + tig0025676:10991-11010 Msa1424290:intron 30.0%
! GACTTATTTGACTTATCTCA+GGG + tig0025676:10992-11011 Msa1424290:intron 30.0%
AACACCAATCAAAACAAAAC+AGG - tig0025676:11018-11037 None:intergenic 30.0%
!! AATGTCCTTATTGGTTGTTT+TGG + tig0025676:11132-11151 Msa1424290:intron 30.0%
TTCATCCAAAACAACCAATA+AGG - tig0025676:11140-11159 None:intergenic 30.0%
!!! TATTGGTTGTTTTGGATGAA+TGG + tig0025676:11140-11159 Msa1424290:intron 30.0%
AAACCATATAGACTGATACA+CGG - tig0025676:11370-11389 None:intergenic 30.0%
! TATCAGTCTATATGGTTTGT+AGG + tig0025676:11372-11391 Msa1424290:five_prime_UTR 30.0%
TTTCAACATTTAGCATGTAC+TGG + tig0025676:11476-11495 Msa1424290:five_prime_UTR 30.0%
! ATACCATACCTTATTTCCTT+TGG + tig0025676:11704-11723 Msa1424290:intron 30.0%
TGCAACTTTATCAGCTTAAA+AGG - tig0025676:11799-11818 None:intergenic 30.0%
! TTTTAAGCTGATAAAGTTGC+AGG + tig0025676:11798-11817 Msa1424290:intron 30.0%
TGATTTAATTGAGGCAATGT+TGG - tig0025676:12028-12047 None:intergenic 30.0%
AACATTGCCTCAATTAAATC+AGG + tig0025676:12027-12046 Msa1424290:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG + tig0025676:11476-11495 Msa1424290:five_prime_UTR 30.0%
ACAAATGCAATCATTCAACA+AGG - tig0025676:12372-12391 None:intergenic 30.0%
TATTGTTCTTATAGAAGGTG+AGG + tig0025676:12726-12745 Msa1424290:five_prime_UTR 30.0%
!! AACTTGTTGATGCTTCAATA+TGG - tig0025676:12895-12914 None:intergenic 30.0%
TGAATGCTTGGATATCTATT+AGG - tig0025676:12955-12974 None:intergenic 30.0%
GAGAAAGTCCAAAAGAATTA+GGG + tig0025676:13311-13330 Msa1424290:intron 30.0%
TCTATTATGCATTTGACACA+CGG + tig0025676:13648-13667 Msa1424290:intron 30.0%
TCGTTTGTCAGAAAAAAATG+TGG + tig0025676:13779-13798 Msa1424290:intron 30.0%
CAGAAGTAATGTAAAAGGTA+AGG + tig0025676:13898-13917 Msa1424290:five_prime_UTR 30.0%
TAATGTAAAAGGTAAGGTGA+CGG + tig0025676:13904-13923 Msa1424290:five_prime_UTR 30.0%
GAAACAATGTTTACCTGTAT+AGG - tig0025676:14212-14231 None:intergenic 30.0%
! TTTTGTCTTTAAGCAAAGAC+TGG + tig0025676:14343-14362 Msa1424290:intron 30.0%
TATGAAGAGTTCAGAGAAAT+AGG + tig0025676:14915-14934 Msa1424290:intron 30.0%
TTCAAAGTTCCAAGAACAAA+CGG + tig0025676:15024-15043 Msa1424290:five_prime_UTR 30.0%
TTATTGCATCTACAGCAAAA+TGG + tig0025676:15135-15154 Msa1424290:five_prime_UTR 30.0%
!!! ATGTTTTGATCATTCTGTGT+TGG + tig0025676:15314-15333 Msa1424290:intron 30.0%
CATACATAAAGTTTCCTGAA+GGG - tig0025676:15400-15419 None:intergenic 30.0%
!!! TAGAGTGGTTTTAAAGACAA+TGG + tig0025676:15536-15555 Msa1424290:five_prime_UTR 30.0%
TTTAAAGACAATGGAAAGAG+AGG + tig0025676:15545-15564 Msa1424290:five_prime_UTR 30.0%
ACATCATATCAATAGACTCA+AGG - tig0025676:15629-15648 None:intergenic 30.0%
TCTATTGATATGATGTCTTG+AGG + tig0025676:15633-15652 Msa1424290:five_prime_UTR 30.0%
CTATTGATATGATGTCTTGA+GGG + tig0025676:15634-15653 Msa1424290:five_prime_UTR 30.0%
ATTAAAAACAAGCAGTGGAA+TGG - tig0025676:15680-15699 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG + tig0025676:15726-15745 Msa1424290:intron 30.0%
TAGCTATCATTATGTTCTCT+CGG - tig0025676:15756-15775 None:intergenic 30.0%
TAATGAGCTCTTATGTTGTT+GGG - tig0025676:15885-15904 None:intergenic 30.0%
TTAATGAGCTCTTATGTTGT+TGG - tig0025676:15886-15905 None:intergenic 30.0%
TGTGTCAATAACACTAATAG+TGG - tig0025676:16072-16091 None:intergenic 30.0%
!! AGTAAACTGTTTCTGTTACA+AGG + tig0025676:16111-16130 Msa1424290:intron 30.0%
TTAATTGGAGGTAGTTATGT+TGG + tig0025676:16194-16213 Msa1424290:intron 30.0%
! ACCAAGTAAATTTTCCACAA+GGG - tig0025676:16240-16259 None:intergenic 30.0%
AAACATCACCTTCTTTGTAT+TGG - tig0025676:16326-16345 None:intergenic 30.0%
CCAAAAACAAGTTACATTCA+TGG - tig0025676:16356-16375 None:intergenic 30.0%
!!! CCATGAATGTAACTTGTTTT+TGG + tig0025676:16353-16372 Msa1424290:intron 30.0%
AAAACTCTTCATCAGCAATT+AGG - tig0025676:17052-17071 None:intergenic 30.0%
AGGCATGAAAATTCTATCTT+GGG - tig0025676:17178-17197 None:intergenic 30.0%
AAGGCATGAAAATTCTATCT+TGG - tig0025676:17179-17198 None:intergenic 30.0%
! AATTTTCATGCCTTTTGTGA+AGG + tig0025676:17185-17204 Msa1424290:five_prime_UTR 30.0%
TGTAAATATTCCAAAATCCG+CGG - tig0025676:17343-17362 None:intergenic 30.0%
TACAAAGAATCCAATAACTG+AGG + tig0025676:17359-17378 Msa1424290:five_prime_UTR 30.0%
TTAAAATATTTGGTTGTGGC+AGG + tig0025676:17807-17826 Msa1424290:intron 30.0%
CAACAAAAATAATATCAGGG+TGG - tig0025676:17838-17857 None:intergenic 30.0%
TACTAATATTCGTAGCAAGA+AGG - tig0025676:17953-17972 None:intergenic 30.0%
!! ATTTTAGTGGTTGATGTCAA+TGG + tig0025676:18155-18174 Msa1424290:exon 30.0%
GGATATTCAAATGCAAGAAA+AGG + tig0025676:18290-18309 Msa1424290:CDS 30.0%
ATTCAAATGCAAGAAAAGGA+CGG + tig0025676:18294-18313 Msa1424290:CDS 30.0%
!! TATGAAGAGTGTTTGAAATG+TGG + tig0025676:18832-18851 Msa1424290:CDS 30.0%
!! ATGAAGAGTGTTTGAAATGT+GGG + tig0025676:18833-18852 Msa1424290:CDS 30.0%
! TTATGTCTCAAAACCTTTTG+AGG + tig0025676:18864-18883 Msa1424290:CDS 30.0%
! ATTAGTTAGTATTGAACTGG+TGG + tig0025676:18955-18974 Msa1424290:intron 30.0%
!!! TAGTCTAAGATGTTTTGGTT+TGG + tig0025676:19066-19085 Msa1424290:intron 30.0%
! TTTCAGATACTTTTATCTGC+TGG - tig0025676:19163-19182 None:intergenic 30.0%
TGAACTCTTCTTCATATCTA+TGG - tig0025676:19277-19296 None:intergenic 30.0%
GAAAGAGATTTAGTGTTAGT+TGG + tig0025676:19313-19332 Msa1424290:intron 30.0%
! AGAAACTTTTGCAGAATATG+CGG + tig0025676:19405-19424 Msa1424290:CDS 30.0%
TAGAGTGGTTATAAAGACAA+TGG + tig0025676:19519-19538 Msa1424290:CDS 30.0%
TATAAAGACAATGGAAAGAG+AGG + tig0025676:19528-19547 Msa1424290:CDS 30.0%
AATAAAAACAAGCAGAGGAA+TGG - tig0025676:19662-19681 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG + tig0025676:15726-15745 Msa1424290:intron 30.0%
AGCTGAAACATAGTGAAATA+AGG - tig0025676:19905-19924 None:intergenic 30.0%
TATGAGTAATTAGAGGATGA+AGG + tig0025676:19958-19977 Msa1424290:intron 30.0%
!! TTGACATTTTTATTGGTGTC+AGG + tig0025676:20298-20317 Msa1424290:intron 30.0%
!!! TGACATTTTTATTGGTGTCA+GGG + tig0025676:20299-20318 Msa1424290:intron 30.0%
!! ACTTTTAACCGACTTTTTGA+TGG + tig0025676:20340-20359 Msa1424290:CDS 30.0%
!!! TTATTTTGACTCCAACTTTC+AGG - tig0025676:20486-20505 None:intergenic 30.0%
! AATAAATTTATCGGGCCTTT+TGG + tig0025676:20505-20524 Msa1424290:three_prime_UTR 30.0%
!!! AGACTCGTTATTTTTCAACT+TGG + tig0025676:20607-20626 Msa1424290:three_prime_UTR 30.0%
!!! GACTCGTTATTTTTCAACTT+GGG + tig0025676:20608-20627 Msa1424290:three_prime_UTR 30.0%
CAAAATGATGAAGAATAGCA+AGG - tig0025676:20707-20726 None:intergenic 30.0%
! GCTATTCTTCATCATTTTGT+AGG + tig0025676:20708-20727 Msa1424290:three_prime_UTR 30.0%
AGTCTGAAAGGAGATTAAAC+GGG - tig0025676:10486-10505 None:intergenic 35.0%
GAGTCTGAAAGGAGATTAAA+CGG - tig0025676:10487-10506 None:intergenic 35.0%
TTGTGTCTGAAAAATCGCAA+TGG - tig0025676:10515-10534 None:intergenic 35.0%
GAGAAAAAAGGAGCTTCAAT+CGG - tig0025676:10673-10692 None:intergenic 35.0%
TTGCAGAGAAGAGAGAAAAA+AGG - tig0025676:10685-10704 None:intergenic 35.0%
TGCTTCGAAAACTCTTGATT+AGG + tig0025676:10739-10758 Msa1424290:intron 35.0%
GCTTCGAAAACTCTTGATTA+GGG + tig0025676:10740-10759 Msa1424290:intron 35.0%
GTTTATACTCTCAAACCCTA+AGG + tig0025676:10762-10781 Msa1424290:intron 35.0%
TTTGTGCTCACTGCTAAAAT+GGG - tig0025676:11067-11086 None:intergenic 35.0%
! TTTTGTGCTCACTGCTAAAA+TGG - tig0025676:11068-11087 None:intergenic 35.0%
ATATAGACTGATACACGGAT+AGG - tig0025676:11365-11384 None:intergenic 35.0%
TATCCGTGTATCAGTCTATA+TGG + tig0025676:11364-11383 Msa1424290:five_prime_UTR 35.0%
TATGGTTTAATCAGTCTGCA+GGG - tig0025676:11591-11610 None:intergenic 35.0%
CTACCAAAGGAAATAAGGTA+TGG - tig0025676:11710-11729 None:intergenic 35.0%
GAAGCATGACATTATTGACA+TGG - tig0025676:11973-11992 None:intergenic 35.0%
! GTTTTCATGAGCTATCTTGA+TGG + tig0025676:12304-12323 Msa1424290:five_prime_UTR 35.0%
! TTCTAAGTGTGACACGTTTT+TGG - tig0025676:12524-12543 None:intergenic 35.0%
! ATTTAATGGACCACACACTA+TGG + tig0025676:12582-12601 Msa1424290:five_prime_UTR 35.0%
CTAATCCTATTTGATCTCCT+GGG - tig0025676:12994-13013 None:intergenic 35.0%
TCTAATCCTATTTGATCTCC+TGG - tig0025676:12995-13014 None:intergenic 35.0%
GAGAAGGTCCAAAAGAATTA+GGG + tig0025676:13131-13150 Msa1424290:intron 35.0%
! AACAATGGCCCTAATTCTTT+TGG - tig0025676:13142-13161 None:intergenic 35.0%
GGAGAAAGTCCAAAAGAATT+AGG + tig0025676:13310-13329 Msa1424290:intron 35.0%
GAGAAGGTCAAAAAGAATCA+GGG + tig0025676:13485-13504 Msa1424290:five_prime_UTR 35.0%
AAAAATGTGGAGAAACAAGC+TGG + tig0025676:13792-13811 Msa1424290:five_prime_UTR 35.0%
AGCTGGAGATATCAAGAAAT+TGG + tig0025676:13809-13828 Msa1424290:five_prime_UTR 35.0%
GAGTGCAGAAGTAATGTAAA+AGG + tig0025676:13893-13912 Msa1424290:five_prime_UTR 35.0%
AATCTAGTCCAGAAAGAGAA+AGG + tig0025676:14118-14137 Msa1424290:five_prime_UTR 35.0%
CCTGTATAGGAAAGAGATAA+TGG - tig0025676:14199-14218 None:intergenic 35.0%
CCATTATCTCTTTCCTATAC+AGG + tig0025676:14196-14215 Msa1424290:five_prime_UTR 35.0%
TAACAACCCTCTTACTCATT+GGG + tig0025676:14234-14253 Msa1424290:five_prime_UTR 35.0%
! AAATATTGGCTGTTGAGAGA+AGG + tig0025676:14423-14442 Msa1424290:intron 35.0%
! AATATTGGCTGTTGAGAGAA+GGG + tig0025676:14424-14443 Msa1424290:intron 35.0%
CAAGCTTATGTCTCAAAAGA+TGG - tig0025676:14483-14502 None:intergenic 35.0%
CCAAACATGATGAATGATTG+AGG - tig0025676:14636-14655 None:intergenic 35.0%
CCTCAATCATTCATCATGTT+TGG + tig0025676:14633-14652 Msa1424290:intron 35.0%
! TCTTGTTTCCTAAGACTCTT+AGG + tig0025676:14676-14695 Msa1424290:intron 35.0%
CTCTGAACTCTTCATATCTA+TGG - tig0025676:14911-14930 None:intergenic 35.0%
GAAAGAGATTTAGTGTTAGC+TGG + tig0025676:14944-14963 Msa1424290:intron 35.0%
TCAAAGTTCCAAGAACAAAC+GGG + tig0025676:15025-15044 Msa1424290:five_prime_UTR 35.0%
CAACAAAAATTTGAGAAGCC+GGG - tig0025676:15086-15105 None:intergenic 35.0%
GCAACAAAAATTTGAGAAGC+CGG - tig0025676:15087-15106 None:intergenic 35.0%
! GTTGCTTTGTATTCTTCTGA+TGG + tig0025676:15102-15121 Msa1424290:five_prime_UTR 35.0%
ATGTGGATACTAAAGTGAGA+AGG + tig0025676:15158-15177 Msa1424290:five_prime_UTR 35.0%
TACTAAAGTGAGAAGGAAAG+AGG + tig0025676:15165-15184 Msa1424290:five_prime_UTR 35.0%
AAAACATTCAAGCACAAACC+TGG - tig0025676:15301-15320 None:intergenic 35.0%
! TGCTTTTATGATTTCCCTTC+AGG + tig0025676:15383-15402 Msa1424290:intron 35.0%
GCATACATAAAGTTTCCTGA+AGG - tig0025676:15401-15420 None:intergenic 35.0%
GGAAACTTTATGTATGCTTC+AGG + tig0025676:15404-15423 Msa1424290:intron 35.0%
! GGAAACTTTTGCCGAATATA+CGG + tig0025676:15425-15444 Msa1424290:intron 35.0%
CTATGCACAAAGAGTTAACT+CGG + tig0025676:15488-15507 Msa1424290:five_prime_UTR 35.0%
CCACAATTAAAAACAAGCAG+TGG - tig0025676:15685-15704 None:intergenic 35.0%
!!! CCACTGCTTGTTTTTAATTG+TGG + tig0025676:15682-15701 Msa1424290:intron 35.0%
!!! CTGCTTGTTTTTAATTGTGG+AGG + tig0025676:15685-15704 Msa1424290:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG - tig0025676:15856-15875 None:intergenic 35.0%
TGAAATAAGGATATACCCTG+TGG - tig0025676:15914-15933 None:intergenic 35.0%
CATGAGTAATTAGAGGATGA+AGG + tig0025676:15978-15997 Msa1424290:intron 35.0%
! AACACTAATAGTGGCATTGA+CGG - tig0025676:16063-16082 None:intergenic 35.0%
TCTGTTACAAGGCTTGTATT+TGG + tig0025676:16122-16141 Msa1424290:intron 35.0%
TCCCTTGTGGAAAATTTACT+TGG + tig0025676:16236-16255 Msa1424290:five_prime_UTR 35.0%
! GACCAAGTAAATTTTCCACA+AGG - tig0025676:16241-16260 None:intergenic 35.0%
AATTTACTTGGTCAACTTGC+TGG + tig0025676:16248-16267 Msa1424290:five_prime_UTR 35.0%
TTGGTTGCCATACATGATTA+GGG - tig0025676:16307-16326 None:intergenic 35.0%
ATTGGTTGCCATACATGATT+AGG - tig0025676:16308-16327 None:intergenic 35.0%
TATGGCAACCAATACAAAGA+AGG + tig0025676:16315-16334 Msa1424290:five_prime_UTR 35.0%
GGAAACATCAAATGACATGT+AGG + tig0025676:16387-16406 Msa1424290:intron 35.0%
ACATCAAATGACATGTAGGT+AGG + tig0025676:16391-16410 Msa1424290:intron 35.0%
! GCTACTGTCATTACATTTTC+TGG + tig0025676:16422-16441 Msa1424290:intron 35.0%
!!! CATTTTCTGGAACTGACTTT+CGG + tig0025676:16435-16454 Msa1424290:intron 35.0%
! ACACTGCCAGTTATGAATTT+TGG - tig0025676:16592-16611 None:intergenic 35.0%
! AACAGCAAAAGTGTACTTGA+AGG - tig0025676:16775-16794 None:intergenic 35.0%
ATAATGCAGTTCAATAAGCG+AGG + tig0025676:16838-16857 Msa1424290:intron 35.0%
AAGCTTGAGACTTATCGAAA+TGG + tig0025676:16916-16935 Msa1424290:five_prime_UTR 35.0%
AGATGTATGCACAACTTCTT+CGG - tig0025676:16947-16966 None:intergenic 35.0%
TGTAATCTCAAAACGCTAAG+TGG + tig0025676:16973-16992 Msa1424290:five_prime_UTR 35.0%
CGATGCTTCAACTAAAAAAG+TGG + tig0025676:17076-17095 Msa1424290:five_prime_UTR 35.0%
TTATGAACAAGTCACCTAGA+TGG + tig0025676:17112-17131 Msa1424290:five_prime_UTR 35.0%
TATGAACAAGTCACCTAGAT+GGG + tig0025676:17113-17132 Msa1424290:five_prime_UTR 35.0%
! AACTCGACTTCTAGAAACTA+TGG + tig0025676:17213-17232 Msa1424290:five_prime_UTR 35.0%
! AAGTACCTTTTCATTTACCG+CGG + tig0025676:17323-17342 Msa1424290:five_prime_UTR 35.0%
AAAATCCGCGGTAAATGAAA+AGG - tig0025676:17331-17350 None:intergenic 35.0%
! TTTTCATTTACCGCGGATTT+TGG + tig0025676:17330-17349 Msa1424290:five_prime_UTR 35.0%
!!! ATCTACCATCCAGTTTTAGA+GGG + tig0025676:17403-17422 Msa1424290:five_prime_UTR 35.0%
!! TTAAACCCTCTAAAACTGGA+TGG - tig0025676:17411-17430 None:intergenic 35.0%
AGATACCATTTGAAGAGACT+TGG + tig0025676:17474-17493 Msa1424290:five_prime_UTR 35.0%
GATACCATTTGAAGAGACTT+GGG + tig0025676:17475-17494 Msa1424290:five_prime_UTR 35.0%
!! CAAAGAAACAGCCTTATTGA+TGG - tig0025676:17523-17542 None:intergenic 35.0%
!! AATAAGGCTGTTTCTTTGTG+TGG + tig0025676:17525-17544 Msa1424290:five_prime_UTR 35.0%
!! ATAAGGCTGTTTCTTTGTGT+GGG + tig0025676:17526-17545 Msa1424290:five_prime_UTR 35.0%
GTTTCTTTGTGTGGGAAAAA+TGG + tig0025676:17534-17553 Msa1424290:five_prime_UTR 35.0%
ATTAAAAACTTACCCTGTGC+TGG - tig0025676:17565-17584 None:intergenic 35.0%
! CATCTAAAGTCACACATGAT+CGG + tig0025676:17659-17678 Msa1424290:intron 35.0%
! TTGCATTTGTTCTTGTTGTG+TGG + tig0025676:17758-17777 Msa1424290:intron 35.0%
CACTGTATCACTAAAACATG+CGG - tig0025676:18000-18019 None:intergenic 35.0%
! AAATTTTCATTCCGCACAGA+AGG - tig0025676:18139-18158 None:intergenic 35.0%
! GTGCGGAATGAAAATTTTAG+TGG + tig0025676:18142-18161 Msa1424290:five_prime_UTR 35.0%
TTCAAATGCAAGAAAAGGAC+GGG + tig0025676:18295-18314 Msa1424290:CDS 35.0%
TTACGTGGATTCAATTTACG+TGG - tig0025676:18468-18487 None:intergenic 35.0%
TCATGGCCAATATAGGTAAA+CGG - tig0025676:18789-18808 None:intergenic 35.0%
AACACTCTTCATATGTAGCA+TGG - tig0025676:18825-18844 None:intergenic 35.0%
TGAACAATTCCTTCCTCAAA+AGG - tig0025676:18880-18899 None:intergenic 35.0%
!! TTTTGAGGAAGGAATTGTTC+AGG + tig0025676:18879-18898 Msa1424290:CDS 35.0%
!! GGTCTTAGTCTAAGATGTTT+TGG + tig0025676:19061-19080 Msa1424290:intron 35.0%
TGCTGTAATGTTACTGTACT+TGG + tig0025676:19108-19127 Msa1424290:intron 35.0%
GAAGAAGAGTTCAGAGAAAT+AGG + tig0025676:19284-19303 Msa1424290:intron 35.0%
!! AGTGTTAGTTGGTGTTGTAA+TGG + tig0025676:19324-19343 Msa1424290:intron 35.0%
!! GTGTTAGTTGGTGTTGTAAT+GGG + tig0025676:19325-19344 Msa1424290:intron 35.0%
!! CTTGTAACTTTGAAGCCAAA+GGG - tig0025676:19387-19406 None:intergenic 35.0%
!! TCTTGTAACTTTGAAGCCAA+AGG - tig0025676:19388-19407 None:intergenic 35.0%
GTTAACAACTCTTTGTGCAT+AGG - tig0025676:19470-19489 None:intergenic 35.0%
TGCACAAAGAGTTGTTAACT+CGG + tig0025676:19471-19490 Msa1424290:CDS 35.0%
GTTTCCTAAGCAAATATGAC+CGG - tig0025676:19580-19599 None:intergenic 35.0%
ACATCGTATCAATAGACTCA+AGG - tig0025676:19610-19629 None:intergenic 35.0%
CCACAAATAAAAACAAGCAG+AGG - tig0025676:19667-19686 None:intergenic 35.0%
!!! CCTCTGCTTGTTTTTATTTG+TGG + tig0025676:19664-19683 Msa1424290:intron 35.0%
!!! CTGCTTGTTTTTATTTGTGG+AGG + tig0025676:19667-19686 Msa1424290:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG - tig0025676:15856-15875 None:intergenic 35.0%
TAATGAGCTCTTCTGTTGTT+GGG - tig0025676:19863-19882 None:intergenic 35.0%
TTAATGAGCTCTTCTGTTGT+TGG - tig0025676:19864-19883 None:intergenic 35.0%
! AACACTAATAGTGGCATTGA+CGG - tig0025676:16063-16082 None:intergenic 35.0%
! TGTGTCGATAACACTAATAG+TGG - tig0025676:20060-20079 None:intergenic 35.0%
GTTGAAGAAAACGTTGTACT+TGG + tig0025676:20094-20113 Msa1424290:intron 35.0%
TACAGTCCTTGATTTCTTGA+AGG + tig0025676:20264-20283 Msa1424290:intron 35.0%
ACAGTCCTTGATTTCTTGAA+GGG + tig0025676:20265-20284 Msa1424290:intron 35.0%
AGTTACCCTTCAAGAAATCA+AGG - tig0025676:20273-20292 None:intergenic 35.0%
TCTGAAAATATCACGCCAAA+AGG - tig0025676:20523-20542 None:intergenic 35.0%
TAAGCGCGAGACTAATATTT+GGG + tig0025676:20547-20566 Msa1424290:three_prime_UTR 35.0%
CAATGGAGAAAGAGTCTGAA+AGG - tig0025676:10498-10517 None:intergenic 40.0%
! TCCAATCTGAAGCTCGAAAA+TGG + tig0025676:10563-10582 Msa1424290:five_prime_UTR 40.0%
CAGAGAAGAGAGCTAAAGAT+CGG - tig0025676:10610-10629 None:intergenic 40.0%
!! TAGTCGTTTTCTCTCTCACA+AGG + tig0025676:10707-10726 Msa1424290:five_prime_UTR 40.0%
!!! AGGGCCTGTTTTGTTTTGAT+TGG + tig0025676:11011-11030 Msa1424290:intron 40.0%
GAAGCTATTCGAGAAGAAGA+GGG + tig0025676:11162-11181 Msa1424290:intron 40.0%
ATTTGACCAGATTCGACAAG+TGG + tig0025676:11185-11204 Msa1424290:five_prime_UTR 40.0%
CTCTGAATCTGAACAGTCTT+AGG - tig0025676:11211-11230 None:intergenic 40.0%
CTAAGACTGTTCAGATTCAG+AGG + tig0025676:11209-11228 Msa1424290:five_prime_UTR 40.0%
TTCAGATTCAGAGGAAGAAG+AGG + tig0025676:11218-11237 Msa1424290:five_prime_UTR 40.0%
!!! AGAAGAGGATTTTGAAGCAG+AGG + tig0025676:11233-11252 Msa1424290:five_prime_UTR 40.0%
!!! GATTTTGAAGCAGAGGTTGA+AGG + tig0025676:11240-11259 Msa1424290:five_prime_UTR 40.0%
! CCAAATTTCTAGACAGCTCA+AGG - tig0025676:11303-11322 None:intergenic 40.0%
CCTTGAGCTGTCTAGAAATT+TGG + tig0025676:11300-11319 Msa1424290:five_prime_UTR 40.0%
GCTGTCTAGAAATTTGGATG+TGG + tig0025676:11306-11325 Msa1424290:five_prime_UTR 40.0%
GTATGGTTTAATCAGTCTGC+AGG - tig0025676:11592-11611 None:intergenic 40.0%
! TGAGCTATCTTGATGGATGT+AGG + tig0025676:12311-12330 Msa1424290:five_prime_UTR 40.0%
! GAGCTATCTTGATGGATGTA+GGG + tig0025676:12312-12331 Msa1424290:five_prime_UTR 40.0%
! ATCTTGATGGATGTAGGGAA+AGG + tig0025676:12317-12336 Msa1424290:five_prime_UTR 40.0%
ACACTATGGCATGATAGAGT+TGG + tig0025676:12596-12615 Msa1424290:five_prime_UTR 40.0%
!! TAGAGTTGGTGTGTGAATGT+AGG + tig0025676:12610-12629 Msa1424290:five_prime_UTR 40.0%
! AACACTACCTTTTCAGCTGA+AGG + tig0025676:12859-12878 Msa1424290:five_prime_UTR 40.0%
ACTTGAACCTTCAGCTGAAA+AGG - tig0025676:12869-12888 None:intergenic 40.0%
ATGGTCTCAGCGAAAAAGAA+AGG - tig0025676:12931-12950 None:intergenic 40.0%
GCTTGGATATCTATTAGGCA+TGG - tig0025676:12950-12969 None:intergenic 40.0%
CCAATCGGATATTGAATGCT+TGG - tig0025676:12967-12986 None:intergenic 40.0%
CCAAGCATTCAATATCCGAT+TGG + tig0025676:12964-12983 Msa1424290:five_prime_UTR 40.0%
AATATCCGATTGGAAAACCC+AGG + tig0025676:12974-12993 Msa1424290:five_prime_UTR 40.0%
GAAAACCCAGGAGATCAAAT+AGG + tig0025676:12986-13005 Msa1424290:five_prime_UTR 40.0%
ACCACCACCTACTACAATAT+CGG - tig0025676:13103-13122 None:intergenic 40.0%
! ATATTGTAGTAGGTGGTGGT+GGG + tig0025676:13103-13122 Msa1424290:intron 40.0%
GGAGAAGGTCCAAAAGAATT+AGG + tig0025676:13130-13149 Msa1424290:intron 40.0%
ATTAGGGCCATTGTTGAAGT+TGG + tig0025676:13147-13166 Msa1424290:intron 40.0%
!! TAGATGGTGGTGGAGAAATA+AGG + tig0025676:13190-13209 Msa1424290:intron 40.0%
! AACCATGGCCCTAATTCTTT+TGG - tig0025676:13322-13341 None:intergenic 40.0%
GGAGAAGGTCAAAAAGAATC+AGG + tig0025676:13484-13503 Msa1424290:five_prime_UTR 40.0%
GTCAAAAAGAATCAGGGCAA+TGG + tig0025676:13491-13510 Msa1424290:five_prime_UTR 40.0%
GCGAGATATTAGAAAAGCTG+AGG + tig0025676:13577-13596 Msa1424290:five_prime_UTR 40.0%
TGAAATGGAGCTATGAAGCA+CGG - tig0025676:13731-13750 None:intergenic 40.0%
TGCTTCATAGCTCCATTTCA+AGG + tig0025676:13731-13750 Msa1424290:intron 40.0%
! TTAGTGTGATGGCCTTGAAA+TGG - tig0025676:13746-13765 None:intergenic 40.0%
! GCTTTTACCTATATCAGGTG+TGG - tig0025676:13930-13949 None:intergenic 40.0%
AGACGAACAAACTACCAATC+TGG + tig0025676:14150-14169 Msa1424290:five_prime_UTR 40.0%
GAACACAGTTGAAACCAGAT+TGG - tig0025676:14167-14186 None:intergenic 40.0%
CTAACAACCCTCTTACTCAT+TGG + tig0025676:14233-14252 Msa1424290:five_prime_UTR 40.0%
ACAGAACCCAATGAGTAAGA+GGG - tig0025676:14243-14262 None:intergenic 40.0%
! ACTCTTAGGCTAAGAGGTTT+TGG + tig0025676:14690-14709 Msa1424290:intron 40.0%
!!! TAGGCTAAGAGGTTTTGGTT+TGG + tig0025676:14695-14714 Msa1424290:intron 40.0%
!! AGTGTTAGCTGGTGTTGTAA+TGG + tig0025676:14955-14974 Msa1424290:intron 40.0%
!! GTGTTAGCTGGTGTTGTAAT+GGG + tig0025676:14956-14975 Msa1424290:intron 40.0%
!! CTTGGAACTTTGAAGCCAAA+GGG - tig0025676:15018-15037 None:intergenic 40.0%
!! TCTTGGAACTTTGAAGCCAA+AGG - tig0025676:15019-15038 None:intergenic 40.0%
CAAAGTTCCAAGAACAAACG+GGG + tig0025676:15026-15045 Msa1424290:five_prime_UTR 40.0%
! TTTTGTTCCCCGTTTGTTCT+TGG - tig0025676:15036-15055 None:intergenic 40.0%
CATCTACAGCAAAATGGATG+TGG + tig0025676:15141-15160 Msa1424290:five_prime_UTR 40.0%
! AGTGAGAAGGAAAGAGGTTT+TGG + tig0025676:15171-15190 Msa1424290:five_prime_UTR 40.0%
! GTGAGAAGGAAAGAGGTTTT+GGG + tig0025676:15172-15191 Msa1424290:five_prime_UTR 40.0%
TGGGTAGTCTTTGTGATCAA+AGG + tig0025676:15191-15210 Msa1424290:five_prime_UTR 40.0%
GGGTAGTCTTTGTGATCAAA+GGG + tig0025676:15192-15211 Msa1424290:five_prime_UTR 40.0%
CGAGTTAACTCTTTGTGCAT+AGG - tig0025676:15490-15509 None:intergenic 40.0%
GAGTTAACTCGGAAAGAAAG+CGG + tig0025676:15499-15518 Msa1424290:five_prime_UTR 40.0%
GAGAACCCAACAACCTAAAA+GGG - tig0025676:15807-15826 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG - tig0025676:15808-15827 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG + tig0025676:15814-15833 Msa1424290:five_prime_UTR 40.0%
AGCTCTTATGTTGTTGGGTT+GGG - tig0025676:15880-15899 None:intergenic 40.0%
AGCTGACACGTAGTGAAATA+AGG - tig0025676:15927-15946 None:intergenic 40.0%
ATTGGAGGTAGTTATGTTGG+AGG + tig0025676:16197-16216 Msa1424290:intron 40.0%
ACTGATCCCCTAATCATGTA+TGG + tig0025676:16297-16316 Msa1424290:five_prime_UTR 40.0%
TGGTTGCCATACATGATTAG+GGG - tig0025676:16306-16325 None:intergenic 40.0%
!!! TTGTTTTTGGAGATCCACAC+AGG + tig0025676:16366-16385 Msa1424290:intron 40.0%
GTCATTTGATGTTTCCTGTG+TGG - tig0025676:16383-16402 None:intergenic 40.0%
! GACATGTAGGTAGGTTTTTC+TGG + tig0025676:16400-16419 Msa1424290:intron 40.0%
ACCGAGCCAAAATTCATAAC+TGG + tig0025676:16583-16602 Msa1424290:five_prime_UTR 40.0%
!!! GCCAGTTATGAATTTTGGCT+CGG - tig0025676:16587-16606 None:intergenic 40.0%
AATAGAAAGCCCGCAACAAA+TGG + tig0025676:16892-16911 Msa1424290:five_prime_UTR 40.0%
! TCAAGCTTTCCATTTGTTGC+GGG - tig0025676:16904-16923 None:intergenic 40.0%
! CTCAAGCTTTCCATTTGTTG+CGG - tig0025676:16905-16924 None:intergenic 40.0%
CTTGAGACTTATCGAAATGG+AGG + tig0025676:16919-16938 Msa1424290:five_prime_UTR 40.0%
GAAGAAGTTGTGCATACATC+TGG + tig0025676:16946-16965 Msa1424290:five_prime_UTR 40.0%
ACTCTTCATCAGCAATTAGG+TGG - tig0025676:17049-17068 None:intergenic 40.0%
GAGTTATCTGCCTTCACAAA+AGG - tig0025676:17198-17217 None:intergenic 40.0%
! TCGACTTCTAGAAACTATGG+TGG + tig0025676:17216-17235 Msa1424290:five_prime_UTR 40.0%
TCTAGAAACTATGGTGGTAC+CGG + tig0025676:17222-17241 Msa1424290:five_prime_UTR 40.0%
ACTGATACTCAAACCAATGC+CGG - tig0025676:17244-17263 None:intergenic 40.0%
TAAGTGCCTAGCTGAACTAA+TGG + tig0025676:17263-17282 Msa1424290:five_prime_UTR 40.0%
AAGTGCCTAGCTGAACTAAT+GGG + tig0025676:17264-17283 Msa1424290:five_prime_UTR 40.0%
!! GAAAAGGTACTTCCAATCTG+TGG - tig0025676:17315-17334 None:intergenic 40.0%
TCCAATAACTGAGGTGAAGA+AGG + tig0025676:17368-17387 Msa1424290:five_prime_UTR 40.0%
ACCTTCTTCACCTCAGTTAT+TGG - tig0025676:17372-17391 None:intergenic 40.0%
!! GATCTACCATCCAGTTTTAG+AGG + tig0025676:17402-17421 Msa1424290:five_prime_UTR 40.0%
!! GGCTTTAAACCCTCTAAAAC+TGG - tig0025676:17415-17434 None:intergenic 40.0%
! TTTAAAGCCGTTGTGGTTGA+TGG + tig0025676:17426-17445 Msa1424290:five_prime_UTR 40.0%
TTAAAGCCGTTGTGGTTGAT+GGG + tig0025676:17427-17446 Msa1424290:five_prime_UTR 40.0%
GTATCCCAAGTCTCTTCAAA+TGG - tig0025676:17482-17501 None:intergenic 40.0%
CGATCATGTGTGACTTTAGA+TGG - tig0025676:17661-17680 None:intergenic 40.0%
GAGAAAGATTCATGGGTTTG+TGG + tig0025676:17857-17876 Msa1424290:five_prime_UTR 40.0%
CAAACTGAAGTTGAACCATC+AGG - tig0025676:18113-18132 None:intergenic 40.0%
! TGCCTTGAAAAACTTTGGAG+CGG + tig0025676:18191-18210 Msa1424290:CDS 40.0%
! ATCCGCTCCAAAGTTTTTCA+AGG - tig0025676:18196-18215 None:intergenic 40.0%
AGCAAGCATCAAACTTGTGA+GGG - tig0025676:18266-18285 None:intergenic 40.0%
AAGCAAGCATCAAACTTGTG+AGG - tig0025676:18267-18286 None:intergenic 40.0%
CAAGTTTGATGCTTGCTTCA+AGG + tig0025676:18269-18288 Msa1424290:CDS 40.0%
! AATCCACGTAACTTGCATGT+TGG + tig0025676:18477-18496 Msa1424290:intron 40.0%
TTGAAGCAACTCGTCGAATT+CGG + tig0025676:18701-18720 Msa1424290:CDS 40.0%
CGAATGGTGAATGTAGTGAA+AGG + tig0025676:18752-18771 Msa1424290:CDS 40.0%
! ATGGATTACATCTGCTGTCA+TGG - tig0025676:18806-18825 None:intergenic 40.0%
! AGAGTGTTTGAAATGTGGGA+TGG + tig0025676:18837-18856 Msa1424290:CDS 40.0%
! TGTTTGAAATGTGGGATGGA+TGG + tig0025676:18841-18860 Msa1424290:CDS 40.0%
!! GTCTCAAAACCTTTTGAGGA+AGG + tig0025676:18868-18887 Msa1424290:CDS 40.0%
TTGTTAACTCGGAAAGAGAG+CGG + tig0025676:19482-19501 Msa1424290:CDS 40.0%
GAGTCTATTGATACGATGTC+TGG + tig0025676:19611-19630 Msa1424290:intron 40.0%
TATTGATACGATGTCTGGAG+AGG + tig0025676:19616-19635 Msa1424290:intron 40.0%
! GAGCTCTCAGTATGTTTTCT+CGG - tig0025676:19737-19756 None:intergenic 40.0%
! AACAACCTAAAAGGGCTAGT+CGG - tig0025676:19777-19796 None:intergenic 40.0%
!!! ACTAGCCCTTTTAGGTTGTT+GGG + tig0025676:19777-19796 Msa1424290:CDS 40.0%
GAGAACCCAACAACCTAAAA+GGG - tig0025676:15807-15826 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG - tig0025676:15808-15827 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG + tig0025676:15814-15833 Msa1424290:five_prime_UTR 40.0%
AGCTCATTAAAGTGACTGCA+GGG + tig0025676:19874-19893 Msa1424290:intron 40.0%
AGAAGACAATGCAAACTGCA+GGG - tig0025676:20205-20224 None:intergenic 40.0%
CATTCTGGCCATCAAAAAGT+CGG - tig0025676:20351-20370 None:intergenic 40.0%
!! ACTTTTTGATGGCCAGAATG+CGG + tig0025676:20351-20370 Msa1424290:CDS 40.0%
AATGCGGAGTTTAGCACATA+CGG + tig0025676:20367-20386 Msa1424290:CDS 40.0%
!! TTGACTCCAACTTTCAGGTT+GGG - tig0025676:20481-20500 None:intergenic 40.0%
! TTTGACTCCAACTTTCAGGT+TGG - tig0025676:20482-20501 None:intergenic 40.0%
CTAAGCGCGAGACTAATATT+TGG + tig0025676:20546-20565 Msa1424290:three_prime_UTR 40.0%
ATTTCCAATGATCGGCATTG+GGG - tig0025676:20842-20861 None:intergenic 40.0%
GATTTCCAATGATCGGCATT+GGG - tig0025676:20843-20862 None:intergenic 40.0%
TGATTTCCAATGATCGGCAT+TGG - tig0025676:20844-20863 None:intergenic 40.0%
GAAGAGCGGAAAAATCGCAA+TGG - tig0025676:10545-10564 None:intergenic 45.0%
!! GCCATTTTCGAGCTTCAGAT+TGG - tig0025676:10567-10586 None:intergenic 45.0%
ATGGCAATTGAAGCTCGTTG+AGG + tig0025676:10582-10601 Msa1424290:five_prime_UTR 45.0%
TTGCTATCTCAGGTCCTGTT+TGG + tig0025676:10909-10928 Msa1424290:intron 45.0%
GGAAGCTATTCGAGAAGAAG+AGG + tig0025676:11161-11180 Msa1424290:intron 45.0%
CATGGTTTGATCAGTCTGCA+AGG - tig0025676:12249-12268 None:intergenic 45.0%
CTCTATCATGCCATAGTGTG+TGG - tig0025676:12595-12614 None:intergenic 45.0%
TTATAGAGGGAATCACGCGT+GGG - tig0025676:12800-12819 None:intergenic 45.0%
TTTATAGAGGGAATCACGCG+TGG - tig0025676:12801-12820 None:intergenic 45.0%
! GATCTCCTGGGTTTTCCAAT+CGG - tig0025676:12982-13001 None:intergenic 45.0%
AGGATTAGAGTTCGATGCGA+TGG + tig0025676:13006-13025 Msa1424290:five_prime_UTR 45.0%
!! ATGACGGATGGTGTTGAAGT+TGG + tig0025676:13036-13055 Msa1424290:five_prime_UTR 45.0%
AGGAGGACCGATATTGTAGT+AGG + tig0025676:13093-13112 Msa1424290:intron 45.0%
AGGACCGATATTGTAGTAGG+TGG + tig0025676:13096-13115 Msa1424290:intron 45.0%
ACCGATATTGTAGTAGGTGG+TGG + tig0025676:13099-13118 Msa1424290:intron 45.0%
! GATATTGTAGTAGGTGGTGG+TGG + tig0025676:13102-13121 Msa1424290:intron 45.0%
! TATTGTAGTAGGTGGTGGTG+GGG + tig0025676:13104-13123 Msa1424290:intron 45.0%
!! TGGTGGTGGAGAAATAAGGA+TGG + tig0025676:13194-13213 Msa1424290:intron 45.0%
GGTGGAGAAATAAGGATGGA+TGG + tig0025676:13198-13217 Msa1424290:intron 45.0%
! AGGATGGATGGTGTTGAAGT+TGG + tig0025676:13210-13229 Msa1424290:intron 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG + tig0025676:13213-13232 Msa1424290:intron 45.0%
AGGAGGACAGATGGTGTAAT+AGG + tig0025676:13273-13292 Msa1424290:intron 45.0%
AGGACAGATGGTGTAATAGG+TGG + tig0025676:13276-13295 Msa1424290:intron 45.0%
ACAGATGGTGTAATAGGTGG+TGG + tig0025676:13279-13298 Msa1424290:intron 45.0%
! ATGGTGTAATAGGTGGTGGT+GGG + tig0025676:13283-13302 Msa1424290:intron 45.0%
GTCCAAAAGAATTAGGGCCA+TGG + tig0025676:13137-13156 Msa1424290:intron 45.0%
ATTAGGGCCATGGTTGAAGT+TGG + tig0025676:13327-13346 Msa1424290:intron 45.0%
!! TAGATGGTGGTGGAGAAATG+AGG + tig0025676:13370-13389 Msa1424290:intron 45.0%
! AGGATGGATGGTGTTGAAGT+TGG + tig0025676:13210-13229 Msa1424290:intron 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG + tig0025676:13213-13232 Msa1424290:intron 45.0%
ACCACCATCTACAACTCCAT+CGG - tig0025676:13457-13476 None:intergenic 45.0%
ATCAGGGCAATGGATGAAGT+TGG + tig0025676:13501-13520 Msa1424290:five_prime_UTR 45.0%
TGTGTCTGACACGACACTTA+TGG - tig0025676:13681-13700 None:intergenic 45.0%
! GTGCGGCTTTTACCTATATC+AGG - tig0025676:13935-13954 None:intergenic 45.0%
AATCGATCGGAGAGTTCTAC+CGG - tig0025676:14002-14021 None:intergenic 45.0%
GATCTGCACCTTTCTCTTTC+TGG - tig0025676:14129-14148 None:intergenic 45.0%
CACAGAACCCAATGAGTAAG+AGG - tig0025676:14244-14263 None:intergenic 45.0%
!!! AAAGACTGGTTTTGCGCCTA+GGG + tig0025676:14357-14376 Msa1424290:intron 45.0%
GAGTACTAATCATGCTCCCT+AGG - tig0025676:14376-14395 None:intergenic 45.0%
CCTCTTAGCCTAAGAGTCTT+AGG - tig0025676:14687-14706 None:intergenic 45.0%
CCTAAGACTCTTAGGCTAAG+AGG + tig0025676:14684-14703 Msa1424290:intron 45.0%
TCATTCAAGCACATAGAGCC+CGG + tig0025676:15065-15084 Msa1424290:five_prime_UTR 45.0%
AATGGCAGAAGGGTTTCTGT+AGG - tig0025676:15276-15295 None:intergenic 45.0%
AAACCTGGTCAATGGCAGAA+GGG - tig0025676:15286-15305 None:intergenic 45.0%
TCAAGCACAAACCTGGTCAA+TGG - tig0025676:15294-15313 None:intergenic 45.0%
! CTTTTGCCGAATATACGGCT+AGG + tig0025676:15430-15449 Msa1424290:five_prime_UTR 45.0%
GTTTGAGAAGCAGCATAGAG+TGG + tig0025676:15521-15540 Msa1424290:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG + tig0025676:15554-15573 Msa1424290:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG + tig0025676:15559-15578 Msa1424290:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG + tig0025676:15560-15579 Msa1424290:five_prime_UTR 45.0%
GTTTCCTGAGCAAATGTGAC+AGG - tig0025676:15597-15616 None:intergenic 45.0%
AGCAGTGGAATGGTTCACAA+GGG - tig0025676:15670-15689 None:intergenic 45.0%
AAGCAGTGGAATGGTTCACA+AGG - tig0025676:15671-15690 None:intergenic 45.0%
!!! CATTTCTGGCTAGCCCTTTT+AGG + tig0025676:15791-15810 Msa1424290:five_prime_UTR 45.0%
!!! GCTAGCCCTTTTAGGTTGTT+GGG + tig0025676:15799-15818 Msa1424290:five_prime_UTR 45.0%
!! CTTATGTTGTTGGGTTGGGA+GGG - tig0025676:15876-15895 None:intergenic 45.0%
!! TCTTATGTTGTTGGGTTGGG+AGG - tig0025676:15877-15896 None:intergenic 45.0%
GAGCTCTTATGTTGTTGGGT+TGG - tig0025676:15881-15900 None:intergenic 45.0%
AGCTCATTAAAGCGACCACA+GGG + tig0025676:15896-15915 Msa1424290:five_prime_UTR 45.0%
TAGAGGATGAAGGTCGTGTT+TGG + tig0025676:15988-16007 Msa1424290:intron 45.0%
TGTTGGAGGATCCTTTGATG+TGG + tig0025676:16211-16230 Msa1424290:five_prime_UTR 45.0%
GAATTGAACTCAACCCAACG+TGG + tig0025676:16498-16517 Msa1424290:five_prime_UTR 45.0%
GGCAACTCTGTTGAAGTAAG+TGG + tig0025676:16671-16690 Msa1424290:intron 45.0%
GAAGTTGTGCATACATCTGG+CGG + tig0025676:16949-16968 Msa1424290:five_prime_UTR 45.0%
TGTGTCGAAGACACTGGAAT+TGG + tig0025676:17138-17157 Msa1424290:five_prime_UTR 45.0%
TTTATAAGCCGGCCACAGAT+TGG + tig0025676:17300-17319 Msa1424290:five_prime_UTR 45.0%
! TAGAGGGTTTAAAGCCGTTG+TGG + tig0025676:17419-17438 Msa1424290:five_prime_UTR 45.0%
AGGTTTCCCATCAACCACAA+CGG - tig0025676:17436-17455 None:intergenic 45.0%
AGTCGCAAACGCCATCAATA+AGG + tig0025676:17509-17528 Msa1424290:five_prime_UTR 45.0%
AAAAATGGTGCTTCCAGCAC+AGG + tig0025676:17549-17568 Msa1424290:five_prime_UTR 45.0%
AAAATGGTGCTTCCAGCACA+GGG + tig0025676:17550-17569 Msa1424290:five_prime_UTR 45.0%
AGATTCATGGGTTTGTGGAG+AGG + tig0025676:17862-17881 Msa1424290:five_prime_UTR 45.0%
GTAGCAAGAAGGATCATTCG+AGG - tig0025676:17942-17961 None:intergenic 45.0%
GAAGCCACTGAGAACTAGTA+TGG + tig0025676:18025-18044 Msa1424290:five_prime_UTR 45.0%
CCACTGAGAACTAGTATGGT+GGG + tig0025676:18029-18048 Msa1424290:five_prime_UTR 45.0%
! AGCTTGCCTTCAGCAAGTTT+TGG + tig0025676:18052-18071 Msa1424290:five_prime_UTR 45.0%
! GCTTGCCTTCAGCAAGTTTT+GGG + tig0025676:18053-18072 Msa1424290:five_prime_UTR 45.0%
!! CTGTTCCCAAAACTTGCTGA+AGG - tig0025676:18061-18080 None:intergenic 45.0%
!!! CTTCAGCAAGTTTTGGGAAC+AGG + tig0025676:18059-18078 Msa1424290:five_prime_UTR 45.0%
! TCAGTTTGAAGCCTTCTGTG+CGG + tig0025676:18125-18144 Msa1424290:five_prime_UTR 45.0%
ATGTCAATGGAAGTGACTGC+AGG + tig0025676:18168-18187 Msa1424290:CDS 45.0%
GCAGGTGCCTTGAAAAACTT+TGG + tig0025676:18186-18205 Msa1424290:CDS 45.0%
TAGCCAACATGCAAGTTACG+TGG - tig0025676:18483-18502 None:intergenic 45.0%
TGAAGCAACTCGTCGAATTC+GGG + tig0025676:18702-18721 Msa1424290:CDS 45.0%
TCTGCTGTCATGGCCAATAT+AGG - tig0025676:18796-18815 None:intergenic 45.0%
!! GTAACTTTGAAGCCAAAGGG+TGG - tig0025676:19384-19403 None:intergenic 45.0%
! CTTTTGCAGAATATGCGGCT+AGG + tig0025676:19410-19429 Msa1424290:CDS 45.0%
GTTTGAGAAGCAGCATAGAG+TGG + tig0025676:15521-15540 Msa1424290:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG + tig0025676:15554-15573 Msa1424290:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG + tig0025676:15559-15578 Msa1424290:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG + tig0025676:15560-15579 Msa1424290:five_prime_UTR 45.0%
! TGCACCGGTCATATTTGCTT+AGG + tig0025676:19573-19592 Msa1424290:intron 45.0%
AACATACTGAGAGCTCCTAC+TGG + tig0025676:19741-19760 Msa1424290:CDS 45.0%
ACATACTGAGAGCTCCTACT+GGG + tig0025676:19742-19761 Msa1424290:CDS 45.0%
!! TTGTTCCGACTAGCCCTTTT+AGG + tig0025676:19769-19788 Msa1424290:CDS 45.0%
!!! GACTAGCCCTTTTAGGTTGT+TGG + tig0025676:19776-19795 Msa1424290:CDS 45.0%
AGCTCTTCTGTTGTTGGGTT+GGG - tig0025676:19858-19877 None:intergenic 45.0%
GAGCTCATTAAAGTGACTGC+AGG + tig0025676:19873-19892 Msa1424290:intron 45.0%
GAAGACAATGCAAACTGCAG+GGG - tig0025676:20204-20223 None:intergenic 45.0%
GAGAAGACAATGCAAACTGC+AGG - tig0025676:20206-20225 None:intergenic 45.0%
TGTCAGGGAAACATTGCTGA+AGG + tig0025676:20314-20333 Msa1424290:intron 45.0%
ATGTGCTAAACTCCGCATTC+TGG - tig0025676:20366-20385 None:intergenic 45.0%
ATGCGGAGTTTAGCACATAC+GGG + tig0025676:20368-20387 Msa1424290:CDS 45.0%
GCTTCTACGGGTAATGTTGT+GGG + tig0025676:20396-20415 Msa1424290:exon 45.0%
CTTCTACGGGTAATGTTGTG+GGG + tig0025676:20397-20416 Msa1424290:exon 45.0%
! GCATGACGACTTGGATTTCA+TGG + tig0025676:20419-20438 Msa1424290:three_prime_UTR 45.0%
AAAACCCCAATGCCGATCAT+TGG + tig0025676:20835-20854 Msa1424290:three_prime_UTR 45.0%
CGAGCTTCAGATTGGAAGAG+CGG - tig0025676:10559-10578 None:intergenic 50.0%
CTTAGGCCACTTGTCGAATC+TGG - tig0025676:11194-11213 None:intergenic 50.0%
ATGCGATGGCGAAAGGATGA+CGG + tig0025676:13020-13039 Msa1424290:five_prime_UTR 50.0%
! ACGGATGGTGTTGAAGTTGG+CGG + tig0025676:13039-13058 Msa1424290:five_prime_UTR 50.0%
AGGGCCATTGTTGAAGTTGG+TGG + tig0025676:13150-13169 Msa1424290:intron 50.0%
!! GCCATTGTTGAAGTTGGTGG+CGG + tig0025676:13153-13172 Msa1424290:intron 50.0%
ACCGCCACCAACTTCAACAA+TGG - tig0025676:13157-13176 None:intergenic 50.0%
!! ATTGTTGAAGTTGGTGGCGG+TGG + tig0025676:13156-13175 Msa1424290:intron 50.0%
! AATGAGGCTGTAGATGGTGG+TGG + tig0025676:13180-13199 Msa1424290:intron 50.0%
! GATGGTGTAATAGGTGGTGG+TGG + tig0025676:13282-13301 Msa1424290:intron 50.0%
! TGGTGTAATAGGTGGTGGTG+GGG + tig0025676:13284-13303 Msa1424290:intron 50.0%
!! TAATAGGTGGTGGTGGGGAA+AGG + tig0025676:13289-13308 Msa1424290:intron 50.0%
! AATGAGGCTGTAGATGGTGG+TGG + tig0025676:13180-13199 Msa1424290:intron 50.0%
!! TGGTGGTGGAGAAATGAGGA+TGG + tig0025676:13374-13393 Msa1424290:intron 50.0%
GGTGGAGAAATGAGGATGGA+TGG + tig0025676:13378-13397 Msa1424290:intron 50.0%
AGGACCGATGGAGTTGTAGA+TGG + tig0025676:13450-13469 Msa1424290:five_prime_UTR 50.0%
ACCGATGGAGTTGTAGATGG+TGG + tig0025676:13453-13472 Msa1424290:five_prime_UTR 50.0%
! GATGGAGTTGTAGATGGTGG+TGG + tig0025676:13456-13475 Msa1424290:five_prime_UTR 50.0%
!! TTGTAGATGGTGGTGGCGAA+AGG + tig0025676:13463-13482 Msa1424290:five_prime_UTR 50.0%
AGGGCAATGGATGAAGTTGG+TGG + tig0025676:13504-13523 Msa1424290:five_prime_UTR 50.0%
!! ATGGATGAAGTTGGTGGCGA+TGG + tig0025676:13510-13529 Msa1424290:five_prime_UTR 50.0%
GTTGGCGATGGAGATGTACA+TGG + tig0025676:13546-13565 Msa1424290:five_prime_UTR 50.0%
GGAGATGTACATGGTGGTTG+TGG + tig0025676:13555-13574 Msa1424290:five_prime_UTR 50.0%
! AAGTGTCGTGTCAGACACAC+CGG + tig0025676:13682-13701 Msa1424290:intron 50.0%
TATGAAGCACGGACACTCCT+CGG - tig0025676:13720-13739 None:intergenic 50.0%
! GATTTAGCGGAGGCTTTGTG+CGG - tig0025676:13952-13971 None:intergenic 50.0%
CGAGGACATCACGGATTTAG+CGG - tig0025676:13965-13984 None:intergenic 50.0%
!!! CAAAGACTGGTTTTGCGCCT+AGG + tig0025676:14356-14375 Msa1424290:intron 50.0%
GCAAAATCAGCACCACCCTT+TGG + tig0025676:15000-15019 Msa1424290:five_prime_UTR 50.0%
!! GGAACTTTGAAGCCAAAGGG+TGG - tig0025676:15015-15034 None:intergenic 50.0%
GGATGGCTAGAGCATGAACA+TGG - tig0025676:15255-15274 None:intergenic 50.0%
GCAGAAGGGTTTCTGTAGGA+TGG - tig0025676:15272-15291 None:intergenic 50.0%
AAACCCTTCTGCCATTGACC+AGG + tig0025676:15280-15299 Msa1424290:five_prime_UTR 50.0%
CAAACCTGGTCAATGGCAGA+AGG - tig0025676:15287-15306 None:intergenic 50.0%
AGCGGTCCTAGCCGTATATT+CGG - tig0025676:15439-15458 None:intergenic 50.0%
TGCACCTGTCACATTTGCTC+AGG + tig0025676:15590-15609 Msa1424290:five_prime_UTR 50.0%
!!! GGCTAGCCCTTTTAGGTTGT+TGG + tig0025676:15798-15817 Msa1424290:five_prime_UTR 50.0%
GAGCTCATTAAAGCGACCAC+AGG + tig0025676:15895-15914 Msa1424290:five_prime_UTR 50.0%
CACAAGGGACTCCACATCAA+AGG - tig0025676:16225-16244 None:intergenic 50.0%
CTTTGATGTGGAGTCCCTTG+TGG + tig0025676:16223-16242 Msa1424290:five_prime_UTR 50.0%
AGTCTGAGCATAGCCACGTT+GGG - tig0025676:16514-16533 None:intergenic 50.0%
TCTTCGACACAGACCCATCT+AGG - tig0025676:17129-17148 None:intergenic 50.0%
!! AACTATGGTGGTACCGGCAT+TGG + tig0025676:17228-17247 Msa1424290:five_prime_UTR 50.0%
TGCCTAGCTGAACTAATGGG+CGG + tig0025676:17267-17286 Msa1424290:five_prime_UTR 50.0%
AGGTACTTCCAATCTGTGGC+CGG - tig0025676:17311-17330 None:intergenic 50.0%
! CTAGTCACAGCAGCTCTAAC+AGG - tig0025676:17456-17475 None:intergenic 50.0%
TCATGGGTTTGTGGAGAGGA+CGG + tig0025676:17866-17885 Msa1424290:five_prime_UTR 50.0%
TGCGGCAACTGGAAACAGAA+CGG + tig0025676:17900-17919 Msa1424290:five_prime_UTR 50.0%
GCCACTGAGAACTAGTATGG+TGG + tig0025676:18028-18047 Msa1424290:five_prime_UTR 50.0%
! CCCACCATACTAGTTCTCAG+TGG - tig0025676:18032-18051 None:intergenic 50.0%
AACAGGCAAGAAGAGACAGC+CGG + tig0025676:18076-18095 Msa1424290:five_prime_UTR 50.0%
! CCATCAGGCATCTCTTTTCC+CGG - tig0025676:18098-18117 None:intergenic 50.0%
GATGTGAAGTGTGCAGACAG+CGG + tig0025676:18213-18232 Msa1424290:CDS 50.0%
AACTCGTCGAATTCGGGAGA+TGG + tig0025676:18708-18727 Msa1424290:CDS 50.0%
AATTCGGGAGATGGAGAGGA+CGG + tig0025676:18717-18736 Msa1424290:CDS 50.0%
GCAAAATCAGCACCACCCTT+TGG + tig0025676:15000-15019 Msa1424290:five_prime_UTR 50.0%
GGTTAGGGATGAGTATGCAC+CGG + tig0025676:15575-15594 Msa1424290:five_prime_UTR 50.0%
GTCGGAACAAACTTCCCAGT+AGG - tig0025676:19759-19778 None:intergenic 50.0%
!! CTTCTGTTGTTGGGTTGGGA+GGG - tig0025676:19854-19873 None:intergenic 50.0%
!! TCTTCTGTTGTTGGGTTGGG+AGG - tig0025676:19855-19874 None:intergenic 50.0%
GAGCTCTTCTGTTGTTGGGT+TGG - tig0025676:19859-19878 None:intergenic 50.0%
TGCGGAGTTTAGCACATACG+GGG + tig0025676:20369-20388 Msa1424290:CDS 50.0%
AGTTTAGCACATACGGGGAC+TGG + tig0025676:20374-20393 Msa1424290:CDS 50.0%
GGCTTCTACGGGTAATGTTG+TGG + tig0025676:20395-20414 Msa1424290:exon 50.0%
ATCTAGACTCCGACACGTTC+CGG + tig0025676:20451-20470 Msa1424290:three_prime_UTR 50.0%
!! AACTTTCAGGTTGGGTCTGC+CGG - tig0025676:20473-20492 None:intergenic 50.0%
ACTATTGCTGCTGTGCTCGT+TGG + tig0025676:20571-20590 Msa1424290:three_prime_UTR 50.0%
GAGTTCGATGCGATGGCGAA+AGG + tig0025676:13013-13032 Msa1424290:five_prime_UTR 55.0%
!! GATGGCGAAAGGATGACGGA+TGG + tig0025676:13024-13043 Msa1424290:five_prime_UTR 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG + tig0025676:13042-13061 Msa1424290:five_prime_UTR 55.0%
!! TAGTAGGTGGTGGTGGGGAA+AGG + tig0025676:13109-13128 Msa1424290:intron 55.0%
GGTGGCAATGAGGCTGTAGA+TGG + tig0025676:13174-13193 Msa1424290:intron 55.0%
GGCAATGAGGCTGTAGATGG+TGG + tig0025676:13177-13196 Msa1424290:intron 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG + tig0025676:13042-13061 Msa1424290:five_prime_UTR 55.0%
AGGGCCATGGTTGAAGTTGG+TGG + tig0025676:13330-13349 Msa1424290:intron 55.0%
!! GCCATGGTTGAAGTTGGTGG+CGG + tig0025676:13333-13352 Msa1424290:intron 55.0%
ACCGCCACCAACTTCAACCA+TGG - tig0025676:13337-13356 None:intergenic 55.0%
!! ATGGTTGAAGTTGGTGGCGG+TGG + tig0025676:13336-13355 Msa1424290:intron 55.0%
GGTGGCAATGAGGCTGTAGA+TGG + tig0025676:13174-13193 Msa1424290:intron 55.0%
GGCAATGAGGCTGTAGATGG+TGG + tig0025676:13177-13196 Msa1424290:intron 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG + tig0025676:13042-13061 Msa1424290:five_prime_UTR 55.0%
!! ATGGTGGTGGCGAAAGGAGA+AGG + tig0025676:13469-13488 Msa1424290:five_prime_UTR 55.0%
!! GATGAAGTTGGTGGCGATGG+CGG + tig0025676:13513-13532 Msa1424290:five_prime_UTR 55.0%
GGCGATGGAGATGTACATGG+TGG + tig0025676:13549-13568 Msa1424290:five_prime_UTR 55.0%
AGTGTCGTGTCAGACACACC+GGG + tig0025676:13683-13702 Msa1424290:intron 55.0%
GTGACGGCCACACCTGATAT+AGG + tig0025676:13920-13939 Msa1424290:five_prime_UTR 55.0%
GGACATCACGGATTTAGCGG+AGG - tig0025676:13962-13981 None:intergenic 55.0%
CCATTGCGACGAGGACATCA+CGG - tig0025676:13974-13993 None:intergenic 55.0%
TGATGTCCTCGTCGCAATGG+CGG + tig0025676:13974-13993 Msa1424290:five_prime_UTR 55.0%
GGCTGTTGAGAGAAGGGAGA+AGG + tig0025676:14430-14449 Msa1424290:intron 55.0%
TGTGCATAGGCCACTCCACT+CGG - tig0025676:15477-15496 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG + tig0025676:15819-15838 Msa1424290:five_prime_UTR 55.0%
CAGTCTGAGCATAGCCACGT+TGG - tig0025676:16515-16534 None:intergenic 55.0%
CTCAGACTGCTCAAGCGTGT+GGG + tig0025676:16526-16545 Msa1424290:five_prime_UTR 55.0%
TGGGTCTGTGTCGAAGACAC+TGG + tig0025676:17132-17151 Msa1424290:five_prime_UTR 55.0%
GACCGCCCATTAGTTCAGCT+AGG - tig0025676:17272-17291 None:intergenic 55.0%
CATGGGTTTGTGGAGAGGAC+GGG + tig0025676:17867-17886 Msa1424290:five_prime_UTR 55.0%
AGGACGGGATCTTCAGTGTG+CGG + tig0025676:17882-17901 Msa1424290:five_prime_UTR 55.0%
GATCTTCAGTGTGCGGCAAC+TGG + tig0025676:17889-17908 Msa1424290:five_prime_UTR 55.0%
ACAGGCAAGAAGAGACAGCC+GGG + tig0025676:18077-18096 Msa1424290:five_prime_UTR 55.0%
CCGGGAAAAGAGATGCCTGA+TGG + tig0025676:18095-18114 Msa1424290:five_prime_UTR 55.0%
GTCGAATTCGGGAGATGGAG+AGG + tig0025676:18713-18732 Msa1424290:CDS 55.0%
ACGGCGAATGAGGAGACGAA+TGG + tig0025676:18736-18755 Msa1424290:CDS 55.0%
TGTGCATAGGCCACTCCACT+CGG - tig0025676:15477-15496 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG + tig0025676:15819-15838 Msa1424290:five_prime_UTR 55.0%
!! CATACGGGGACTGGCTTCTA+CGG + tig0025676:20383-20402 Msa1424290:CDS 55.0%
!! ATACGGGGACTGGCTTCTAC+GGG + tig0025676:20384-20403 Msa1424290:CDS 55.0%
TGTTGTGGGGCATGACGACT+TGG + tig0025676:20410-20429 Msa1424290:three_prime_UTR 55.0%
GGCAGACCCAACCTGAAAGT+TGG + tig0025676:20472-20491 Msa1424290:three_prime_UTR 55.0%
!!! GCTGTGCTCGTTGGCTCTTT+TGG + tig0025676:20580-20599 Msa1424290:three_prime_UTR 55.0%
GTTGAAGTTGGCGGTGGCAC+CGG + tig0025676:13048-13067 Msa1424290:five_prime_UTR 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG + tig0025676:13073-13092 Msa1424290:intron 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG + tig0025676:13076-13095 Msa1424290:intron 60.0%
!! GTGGTGGTGGGGAAAGGAGA+AGG + tig0025676:13115-13134 Msa1424290:intron 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG + tig0025676:13164-13183 Msa1424290:intron 60.0%
! GGTGTTGAAGTTGGCGGTGG+CGG + tig0025676:13045-13064 Msa1424290:five_prime_UTR 60.0%
! ACCAGAGCTGAAGGTGGTGG+TGG + tig0025676:13246-13265 Msa1424290:intron 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG + tig0025676:13073-13092 Msa1424290:intron 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG + tig0025676:13076-13095 Msa1424290:intron 60.0%
GGTGGCGAAAGGAGGACAGA+TGG + tig0025676:13264-13283 Msa1424290:intron 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG + tig0025676:13164-13183 Msa1424290:intron 60.0%
GTTGAAGTTGGCGGTGGCAC+CGG + tig0025676:13048-13067 Msa1424290:five_prime_UTR 60.0%
!! CTGAAGGTGGTGGAGGGGAA+AGG + tig0025676:13427-13446 Msa1424290:intron 60.0%
!! AAGGTGGTGGAGGGGAAAGG+AGG + tig0025676:13430-13449 Msa1424290:intron 60.0%
! ACGGACACTCCTCGGATTGG+GGG - tig0025676:13712-13731 None:intergenic 60.0%
CACGGACACTCCTCGGATTG+GGG - tig0025676:13713-13732 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+GGG - tig0025676:13714-13733 None:intergenic 60.0%
AGCACGGACACTCCTCGGAT+TGG - tig0025676:13715-13734 None:intergenic 60.0%
CCGTGATGTCCTCGTCGCAA+TGG + tig0025676:13971-13990 Msa1424290:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG + tig0025676:15445-15464 Msa1424290:five_prime_UTR 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG - tig0025676:15457-15476 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG + tig0025676:15459-15478 Msa1424290:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG - tig0025676:15471-15490 None:intergenic 60.0%
GCTCAGACTGCTCAAGCGTG+TGG + tig0025676:16525-16544 Msa1424290:five_prime_UTR 60.0%
GACTGCTCAAGCGTGTGGGA+AGG + tig0025676:16530-16549 Msa1424290:five_prime_UTR 60.0%
GATGGAGAGGACGGCGAATG+AGG + tig0025676:18726-18745 Msa1424290:CDS 60.0%
CGGCTAGGACCGCTTTCGAA+AGG + tig0025676:15445-15464 Msa1424290:five_prime_UTR 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG - tig0025676:15457-15476 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG + tig0025676:15459-15478 Msa1424290:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG - tig0025676:15471-15490 None:intergenic 60.0%
TTGGGTCTGCCGGAACGTGT+CGG - tig0025676:20463-20482 None:intergenic 60.0%
! ACCGGAGCTGAAGGTGGTGG+TGG + tig0025676:13066-13085 Msa1424290:intron 65.0%
GCCACCACCACCTTCAGCTC+CGG - tig0025676:13070-13089 None:intergenic 65.0%
! GTTGAAGTTGGCGGTGGCGG+TGG + tig0025676:13222-13241 Msa1424290:intron 65.0%
GGTGGCACCAGAGCTGAAGG+TGG + tig0025676:13240-13259 Msa1424290:intron 65.0%
GGCACCAGAGCTGAAGGTGG+TGG + tig0025676:13243-13262 Msa1424290:intron 65.0%
GCCACCACCACCTTCAGCTC+TGG - tig0025676:13070-13089 None:intergenic 65.0%
! ACCGGAGCTGAAGGTGGTGG+AGG + tig0025676:13066-13085 Msa1424290:intron 65.0%
CCCTCCACCACCTTCAGCTC+CGG - tig0025676:13424-13443 None:intergenic 65.0%
!! CCGGAGCTGAAGGTGGTGGA+GGG + tig0025676:13421-13440 Msa1424290:intron 65.0%
!! CGGAGCTGAAGGTGGTGGAG+GGG + tig0025676:13422-13441 Msa1424290:intron 65.0%
GGAGGGGAAAGGAGGACCGA+TGG + tig0025676:13438-13457 Msa1424290:five_prime_UTR 65.0%
!! GTTGGTGGCGATGGCGGTTG+CGG + tig0025676:13519-13538 Msa1424290:five_prime_UTR 65.0%
! GATGGCGGTTGCGGTGGTGT+TGG + tig0025676:13528-13547 Msa1424290:five_prime_UTR 65.0%
!! GGTTGCGGTGGTGTTGGCGA+TGG + tig0025676:13534-13553 Msa1424290:five_prime_UTR 65.0%
!! TCCTCGGATTGGGGGTGTCC+CGG - tig0025676:13704-13723 None:intergenic 65.0%
CCTCGTCGCAATGGCGGTTC+CGG + tig0025676:13980-13999 Msa1424290:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG + tig0025676:15464-15483 Msa1424290:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG + tig0025676:15464-15483 Msa1424290:five_prime_UTR 65.0%
! GGTGGCACCGGAGCTGAAGG+TGG + tig0025676:13060-13079 Msa1424290:intron 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG + tig0025676:13063-13082 Msa1424290:intron 70.0%
GGCGGTGGCACCAGAGCTGA+AGG + tig0025676:13237-13256 Msa1424290:intron 70.0%
! GGTGGCACCGGAGCTGAAGG+TGG + tig0025676:13060-13079 Msa1424290:intron 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG + tig0025676:13063-13082 Msa1424290:intron 70.0%
ACCGGGACACCCCCAATCCG+AGG + tig0025676:13700-13719 Msa1424290:intron 70.0%
CCGGAACCGCCATTGCGACG+AGG - tig0025676:13983-14002 None:intergenic 70.0%
! GGCGGTGGCACCGGAGCTGA+AGG + tig0025676:13057-13076 Msa1424290:five_prime_UTR 75.0%
! GGCGGTGGCACCGGAGCTGA+AGG + tig0025676:13057-13076 Msa1424290:five_prime_UTR 75.0%
! GGTGGCGATGGCGGTTGCGG+TGG + tig0025676:13522-13541 Msa1424290:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
tig0025676 gene 10482 20881 10482 ID=Msa1424290;Name=Msa1424290
tig0025676 mRNA 10482 20881 10482 ID=Msa1424290-mRNA-1;Parent=Msa1424290;Name=Msa1424290-mRNA-1;_AED=0.11;_eAED=0.12;_QI=4342|0.8|0.87|1|0.26|0.25|16|472|271
tig0025676 exon 10482 10728 10482 ID=Msa1424290-mRNA-1:exon:3700;Parent=Msa1424290-mRNA-1
tig0025676 exon 11166 11536 11166 ID=Msa1424290-mRNA-1:exon:3701;Parent=Msa1424290-mRNA-1
tig0025676 exon 12195 13078 12195 ID=Msa1424290-mRNA-1:exon:3702;Parent=Msa1424290-mRNA-1
tig0025676 exon 13433 13618 13433 ID=Msa1424290-mRNA-1:exon:3703;Parent=Msa1424290-mRNA-1
tig0025676 exon 13790 14298 13790 ID=Msa1424290-mRNA-1:exon:3704;Parent=Msa1424290-mRNA-1
tig0025676 exon 14963 15301 14963 ID=Msa1424290-mRNA-1:exon:3705;Parent=Msa1424290-mRNA-1
tig0025676 exon 15426 15655 15426 ID=Msa1424290-mRNA-1:exon:3706;Parent=Msa1424290-mRNA-1
tig0025676 exon 15748 15917 15748 ID=Msa1424290-mRNA-1:exon:3707;Parent=Msa1424290-mRNA-1
tig0025676 exon 16208 16336 16208 ID=Msa1424290-mRNA-1:exon:3708;Parent=Msa1424290-mRNA-1
tig0025676 exon 16473 16685 16473 ID=Msa1424290-mRNA-1:exon:3709;Parent=Msa1424290-mRNA-1
tig0025676 exon 16847 17571 16847 ID=Msa1424290-mRNA-1:exon:3710;Parent=Msa1424290-mRNA-1
tig0025676 exon 17829 18316 17829 ID=Msa1424290-mRNA-1:exon:3711;Parent=Msa1424290-mRNA-1
tig0025676 exon 18699 18900 18699 ID=Msa1424290-mRNA-1:exon:3712;Parent=Msa1424290-mRNA-1
tig0025676 exon 19361 19579 19361 ID=Msa1424290-mRNA-1:exon:3713;Parent=Msa1424290-mRNA-1
tig0025676 exon 19729 19884 19729 ID=Msa1424290-mRNA-1:exon:3714;Parent=Msa1424290-mRNA-1
tig0025676 exon 20320 20881 20320 ID=Msa1424290-mRNA-1:exon:3715;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 10482 10728 10482 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 11166 11536 11166 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 12195 13078 12195 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 13433 13618 13433 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 13790 14298 13790 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 14963 15301 14963 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 15426 15655 15426 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 15748 15917 15748 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 16208 16336 16208 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 16473 16685 16473 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 16847 17571 16847 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 five_prime_UTR 17829 18167 17829 ID=Msa1424290-mRNA-1:five_prime_utr;Parent=Msa1424290-mRNA-1
tig0025676 CDS 18168 18316 18168 ID=Msa1424290-mRNA-1:cds;Parent=Msa1424290-mRNA-1
tig0025676 CDS 18699 18900 18699 ID=Msa1424290-mRNA-1:cds;Parent=Msa1424290-mRNA-1
tig0025676 CDS 19361 19579 19361 ID=Msa1424290-mRNA-1:cds;Parent=Msa1424290-mRNA-1
tig0025676 CDS 19729 19884 19729 ID=Msa1424290-mRNA-1:cds;Parent=Msa1424290-mRNA-1
tig0025676 CDS 20320 20409 20320 ID=Msa1424290-mRNA-1:cds;Parent=Msa1424290-mRNA-1
tig0025676 three_prime_UTR 20410 20881 20410 ID=Msa1424290-mRNA-1:three_prime_utr;Parent=Msa1424290-mRNA-1
Gene Sequence

>Msa1424290

ATGTCAATGGAAGTGACTGCAGGTGCCTTGAAAAACTTTGGAGCGGATGTGAAGTGTGCAGACAGCGGCAAAGCTGCTCTTGAAATGCTTCTATTCCCTCACAAGTTTGATGCTTGCTTCAAGGATATTCAAATGCAAGAAAAGGACGGGTTTGAAGCAACTCGTCGAATTCGGGAGATGGAGAGGACGGCGAATGAGGAGACGAATGGTGAATGTAGTGAAAGGAAAAGTAAATTCCGTTTACCTATATTGGCCATGACAGCAGATGTAATCCATGCTACATATGAAGAGTGTTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGGAATTGTTCAGATGAAGATGCAAAATCAGCACCACCCTTTGGCTTCAAAGTTACAAGAAACTTTTGCAGAATATGCGGCTAGGACCGCTTTCGAAAGGCCGCTACCGAGTGGAGTGGCCTATGCACAAAGAGTTGTTAACTCGGAAAGAGAGCGGTTTGAGAAGCAGCATAGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCACAGGTTAGGGATGAGTATGCACCGGATGACCGAGAAAACATACTGAGAGCTCCTACTGGGAAGTTTGTTCCGACTAGCCCTTTTAGGTTGTTGGGTTCTCATCATCTCGGTGTGGTTTTAACATTTCCTGTTTACAAATTTAAGCTCCCTCCCAACCCAACAACAGAAGAGCTCATTAAAGGAAACATTGCTGAAGGTGCACTTTTAACCGACTTTTTGATGGCCAGAATGCGGAGTTTAGCACATACGGGGACTGGCTTCTACGGGTAA
Protein sequence

>Msa1424290

MSMEVTAGALKNFGADVKCADSGKAALEMLLFPHKFDACFKDIQMQEKDGFEATRRIREMERTANEETNGECSERKSKFRLPILAMTADVIHATYEECLKCGMDGYVSKPFEEGIVQMKMQNQHHPLASKLQETFAEYAARTAFERPLPSGVAYAQRVVNSERERFEKQHRVVIKTMEREASQVRDEYAPDDRENILRAPTGKFVPTSPFRLLGSHHLGVVLTFPVYKFKLPPNPTTEELIKGNIAEGALLTDFLMARMRSLAHTGTGFYG*