AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1087240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1087240 MtrunA17_Chr6g0474001 74.510 153 33 2 1 152 69 216 4.93e-79 235
Msa1087240 MtrunA17_Chr6g0473961 75.676 148 27 3 1 146 69 209 8.39e-76 225
Msa1087240 MtrunA17_Chr6g0473971 75.949 158 31 2 1 156 69 221 5.77e-75 224
Msa1087240 MtrunA17_Chr6g0473931 87.671 146 17 1 1 146 48 192 1.69e-73 219
Msa1087240 MtrunA17_Chr6g0473941 85.161 155 14 1 1 146 48 202 3.95e-71 213
Msa1087240 MtrunA17_Chr6g0473981 72.152 158 36 3 1 156 69 220 6.09e-71 214
Msa1087240 MtrunA17_Chr6g0473881 72.222 144 33 2 1 143 125 262 6.44e-65 201
Msa1087240 MtrunA17_Chr6g0473781 66.234 154 40 3 1 146 72 221 6.68e-63 193
Msa1087240 MtrunA17_Chr6g0473741 69.388 147 39 3 1 146 81 222 1.28e-56 177
Msa1087240 MtrunA17_Chr1g0203861 56.757 148 51 3 1 146 59 195 3.51e-42 140
Msa1087240 MtrunA17_Chr6g0473861 48.000 200 46 4 1 146 78 273 1.29e-40 138
Msa1087240 MtrunA17_Chr6g0473771 77.966 59 13 0 1 59 58 116 2.26e-27 99.4
Msa1087240 MtrunA17_Chr5g0398081 39.216 153 70 3 5 143 74 217 3.00e-27 102
Msa1087240 MtrunA17_Chr5g0398091 41.379 145 76 3 5 143 79 220 1.48e-25 97.8
Msa1087240 MtrunA17_Chr5g0398061 41.379 145 76 3 5 143 74 215 1.61e-25 97.8
Msa1087240 MtrunA17_Chr4g0057231 69.355 62 18 1 1 61 61 122 2.06e-25 95.5
Msa1087240 MtrunA17_Chr7g0265851 40.000 155 79 4 1 147 39 187 1.40e-21 87.0
Msa1087240 MtrunA17_Chr8g0334801 61.667 60 23 0 1 60 67 126 2.92e-20 83.6
Msa1087240 MtrunA17_Chr3g0140161 53.333 75 35 0 1 75 58 132 3.75e-20 82.8
Msa1087240 MtrunA17_Chr7g0232261 61.667 60 23 0 1 60 76 135 4.55e-20 83.6
Msa1087240 MtrunA17_Chr5g0399441 60.000 60 24 0 1 60 43 102 4.39e-19 79.7
Msa1087240 MtrunA17_Chr7g0275841 60.000 60 24 0 1 60 43 102 6.06e-19 79.3
Msa1087240 MtrunA17_Chr8g0340311 58.333 60 25 0 1 60 62 121 1.39e-17 76.3
Msa1087240 MtrunA17_Chr2g0331231 51.220 82 40 0 1 82 56 137 1.67e-17 76.3
Msa1087240 MtrunA17_Chr6g0486701 56.667 60 26 0 1 60 59 118 4.36e-17 75.5
Msa1087240 MtrunA17_Chr4g0055951 58.333 60 25 0 1 60 89 148 4.43e-17 75.9
Msa1087240 MtrunA17_Chr4g0057241 55.000 60 27 0 1 60 29 88 5.19e-17 73.9
Msa1087240 MtrunA17_Chr2g0321071 37.857 140 71 4 3 126 65 204 1.15e-16 74.3
Msa1087240 MtrunA17_Chr4g0017851 52.239 67 32 0 1 67 133 199 2.07e-16 74.7
Msa1087240 MtrunA17_Chr8g0346741 55.556 63 25 1 1 60 54 116 2.88e-16 72.4
Msa1087240 MtrunA17_Chr8g0390091 53.333 60 28 0 1 60 52 111 5.49e-16 72.8
Msa1087240 MtrunA17_Chr6g0473791 90.909 33 3 0 1 33 72 104 9.42e-15 67.8
Msa1087240 MtrunA17_Chr1g0179161 36.879 141 68 6 2 126 15 150 2.79e-14 67.0
Msa1087240 MtrunA17_Chr5g0396181 40.698 86 49 1 1 84 36 121 2.74e-13 64.7
Msa1087240 MtrunA17_Chr6g0486711 55.224 67 30 0 1 67 64 130 3.58e-12 62.4
Msa1087240 MtrunA17_Chr1g0203831 39.683 126 72 2 1 122 71 196 7.17e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1087240 AT4G25470.1 50.000 148 59 4 1 140 66 206 9.52e-38 129
Msa1087240 AT5G51990.1 46.259 147 67 3 1 138 69 212 5.89e-34 119
Msa1087240 AT4G25490.1 52.414 145 53 4 1 135 63 201 1.10e-33 119
Msa1087240 AT4G25480.1 51.389 144 55 3 1 135 66 203 9.09e-33 116
Msa1087240 AT1G63030.2 66.667 72 24 0 1 72 45 116 2.29e-30 109
Msa1087240 AT1G63030.1 66.667 72 24 0 1 72 45 116 2.29e-30 109
Msa1087240 AT1G12610.1 68.056 72 23 0 1 72 45 116 7.51e-30 108
Msa1087240 AT2G35700.1 63.333 60 22 0 1 60 60 119 2.60e-20 83.6
Msa1087240 AT2G44940.1 61.194 67 26 0 1 67 115 181 7.04e-20 84.7
Msa1087240 AT4G16750.1 61.667 60 23 0 1 60 55 114 9.65e-20 82.0
Msa1087240 AT4G32800.1 51.899 79 32 1 1 73 34 112 1.50e-19 82.4
Msa1087240 AT5G25810.1 55.224 67 30 0 1 67 51 117 2.81e-19 81.6
Msa1087240 AT5G11590.1 37.607 117 73 0 1 117 66 182 1.12e-18 80.5
Msa1087240 AT3G60490.1 58.333 60 25 0 1 60 86 145 7.51e-18 78.6
Msa1087240 AT2G25820.1 58.333 60 25 0 1 60 41 100 1.32e-17 77.4
Msa1087240 AT1G01250.1 55.000 60 27 0 1 60 60 119 1.00e-16 74.3
Msa1087240 AT5G52020.1 43.885 139 66 3 1 132 79 212 1.49e-16 74.7
Msa1087240 AT3G16280.1 55.000 60 27 0 1 60 76 135 2.03e-16 74.3
Msa1087240 AT3G16280.2 55.000 60 27 0 1 60 94 153 2.41e-16 74.3
Msa1087240 AT2G36450.1 37.692 130 75 3 1 126 31 158 4.96e-14 67.0
Msa1087240 AT1G71450.1 41.111 90 53 0 1 90 39 128 3.90e-13 64.7
Msa1087240 AT1G21910.1 46.154 78 35 1 1 71 65 142 1.64e-12 63.5
Msa1087240 AT5G64750.1 36.559 93 53 2 1 93 200 286 1.01e-11 62.4
Msa1087240 AT1G33760.1 50.000 74 37 0 1 74 35 108 1.76e-11 60.1

Find 71 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTTGCTTCAATGGCATTA+AGG 0.227810 7_2:+87895064 Msa1087240:CDS
GGAAGAGGAACTTAGATAAA+TGG 0.259157 7_2:+87894956 Msa1087240:five_prime_UTR
CAAATCTTAGTCTTCTTGTT+TGG 0.292823 7_2:-87894997 None:intergenic
AGCAGGGAGGAAGAAGTTTA+AGG 0.309502 7_2:+87894904 Msa1087240:five_prime_UTR
GCTTTGCCCACTTGTCACTA+TGG 0.331506 7_2:+87896296 Msa1087240:CDS
GCCAGAGTTGTGGAGGAATA+TGG 0.338237 7_2:+87895329 Msa1087240:CDS
TCAACAACTTGTTACTGTTT+CGG 0.347752 7_2:-87896338 None:intergenic
AGACTCGCCACCCGGTATAT+AGG 0.350439 7_2:+87894927 Msa1087240:five_prime_UTR
ATGTGCCCGGGCTGCCATCT+CGG 0.400727 7_2:-87895040 None:intergenic
GAAGAGGAACTTAGATAAAT+GGG 0.403807 7_2:+87894957 Msa1087240:five_prime_UTR
TTAAACTTCTTCCTCCCTGC+TGG 0.404819 7_2:-87894902 None:intergenic
TGTTGCTTCAATGGCATTAA+GGG 0.407611 7_2:+87895065 Msa1087240:CDS
AACTGCCGAGATGGCAGCCC+GGG 0.407631 7_2:+87895035 Msa1087240:CDS
TTGTAAACATATCTATGTAT+TGG 0.410668 7_2:-87894835 None:intergenic
GCCTCAGCGGTGGCAGGAAT+AGG 0.415517 7_2:-87895132 None:intergenic
CAAACAAGAAGACTAAGATT+TGG 0.423028 7_2:+87894998 Msa1087240:CDS
CTGTCTCAACTTTGCAGACT+CGG 0.436160 7_2:+87895098 Msa1087240:CDS
AATGTCCCCTACACATAGTA+TGG 0.442156 7_2:+87895356 Msa1087240:CDS
GGCAGCTGCAGAAGCTGCCG+AGG 0.451466 7_2:+87895170 Msa1087240:CDS
GGCACATGATGTTGCTTCAA+TGG 0.452514 7_2:+87895056 Msa1087240:CDS
ATATGTTTACAAGTAACAAC+GGG 0.454775 7_2:+87894846 Msa1087240:five_prime_UTR
CTTTGCCCACTTGTCACTAT+GGG 0.460789 7_2:+87896297 Msa1087240:CDS
ATAAATGGGTTTGTGAAATG+AGG 0.462024 7_2:+87894971 Msa1087240:exon
CTAGTCATTAAAGTCTTGTC+TGG 0.471563 7_2:-87895201 None:intergenic
CTTCCTCACACCCTATATAC+CGG 0.476417 7_2:-87894938 None:intergenic
TGTTGAAGTCGAAGAAGAAG+AGG 0.476444 7_2:+87895293 Msa1087240:CDS
GTATATAGGGTGTGAGGAAG+AGG 0.481626 7_2:+87894941 Msa1087240:five_prime_UTR
CGGGCTGCCATCTCGGCAGT+TGG 0.488790 7_2:-87895033 None:intergenic
AGTACAAGACTTTCAATATG+AGG 0.490333 7_2:+87895401 Msa1087240:CDS
CATGCTCCATACTATGTGTA+GGG 0.491173 7_2:-87895362 None:intergenic
TTGAAGCAACATCATGTGCC+CGG 0.494126 7_2:-87895053 None:intergenic
CTGAGGCAAAAGACATTCAA+AGG 0.499259 7_2:+87895148 Msa1087240:CDS
TAAATGGGTTTGTGAAATGA+GGG 0.505569 7_2:+87894972 Msa1087240:exon
TGTTAAGAGAGTGAAGAGTA+AGG 0.505636 7_2:-87894752 None:intergenic
GCCATATTCCTCCACAACTC+TGG 0.506491 7_2:-87895330 None:intergenic
GCAAAGCGTCCACCGACTTA+AGG 0.508271 7_2:-87896280 None:intergenic
TCAGGCGATGTTCCTTAAGT+CGG 0.522362 7_2:+87896268 Msa1087240:intron
CAACTGCCGAGATGGCAGCC+CGG 0.522483 7_2:+87895034 Msa1087240:CDS
TCACTATGGGATTAGCCTCA+TGG 0.534276 7_2:+87896310 Msa1087240:CDS
TCATGCTCCATACTATGTGT+AGG 0.541468 7_2:-87895363 None:intergenic
GCTAATCCCATAGTGACAAG+TGG 0.545274 7_2:-87896303 None:intergenic
CGAGTCTGCAAAGTTGAGAC+AGG 0.558907 7_2:-87895097 None:intergenic
TTACAAGTAACAACGGGGAG+GGG 0.563550 7_2:+87894852 Msa1087240:five_prime_UTR
TGAGGCAAAAGACATTCAAA+GGG 0.575611 7_2:+87895149 Msa1087240:CDS
TGAAGCAACATCATGTGCCC+GGG 0.576327 7_2:-87895052 None:intergenic
AAGAAGACTAAGATTTGGCT+AGG 0.578791 7_2:+87895003 Msa1087240:CDS
TCCTATTCCTGCCACCGCTG+AGG 0.581983 7_2:+87895131 Msa1087240:CDS
CTTGTCTGGTCTGAAAGCCT+CGG 0.583680 7_2:-87895187 None:intergenic
TTTACAAGTAACAACGGGGA+GGG 0.587349 7_2:+87894851 Msa1087240:five_prime_UTR
CAAGTAACAACGGGGAGGGG+CGG 0.588787 7_2:+87894855 Msa1087240:five_prime_UTR
TAGTGACATTGACACGGTTG+TGG 0.591596 7_2:+87895221 Msa1087240:CDS
TCAACTTTGCAGACTCGGTG+TGG 0.601701 7_2:+87895103 Msa1087240:CDS
TGTGGCTGTTGTCGTTGCAG+TGG 0.604136 7_2:+87895239 Msa1087240:CDS
ACTTTGCAGACTCGGTGTGG+AGG 0.609381 7_2:+87895106 Msa1087240:CDS
TTCCTCACACCCTATATACC+GGG 0.609646 7_2:-87894937 None:intergenic
GTTGCTTCAATGGCATTAAG+GGG 0.609844 7_2:+87895066 Msa1087240:CDS
TGTTGAATATGCCAGAGTTG+TGG 0.615027 7_2:+87895319 Msa1087240:CDS
GATGGTGCTCAAGATAGAGT+TGG 0.617366 7_2:-87894782 None:intergenic
TGTCGTTGCAGTGGAAGAAG+AGG 0.624573 7_2:+87895248 Msa1087240:CDS
GATATGTTTACAAGTAACAA+CGG 0.629910 7_2:+87894845 Msa1087240:five_prime_UTR
CTAATCCCATAGTGACAAGT+GGG 0.645256 7_2:-87896302 None:intergenic
TATGGGATTAGCCTCATGGT+CGG 0.667594 7_2:+87896314 Msa1087240:CDS
CACCCGGTATATAGGGTGTG+AGG 0.670539 7_2:+87894935 Msa1087240:five_prime_UTR
AATGACTAGTGACATTGACA+CGG 0.673366 7_2:+87895215 Msa1087240:CDS
ACAAGACTTTCAATATGAGG+AGG 0.676699 7_2:+87895404 Msa1087240:CDS
ACTGTTTCGGACCGACCATG+AGG 0.686176 7_2:-87896325 None:intergenic
TGAATATGCCAGAGTTGTGG+AGG 0.686416 7_2:+87895322 Msa1087240:CDS
GTTTACAAGTAACAACGGGG+AGG 0.703815 7_2:+87894850 Msa1087240:five_prime_UTR
ATGCTCCATACTATGTGTAG+GGG 0.710393 7_2:-87895361 None:intergenic
CTCACACCCTATATACCGGG+TGG 0.747992 7_2:-87894934 None:intergenic
TATGTTTACAAGTAACAACG+GGG 0.831032 7_2:+87894847 Msa1087240:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTACAATCTAAAATAAAAAA+TGG - chr7_2:87895468-87895487 None:intergenic 15.0%
!!! TTTTATTTTAGATTGTAGTA+TGG + chr7_2:87895470-87895489 Msa1087240:intron 15.0%
!! TGTAGGTATTAAAAAAATTT+CGG + chr7_2:87895839-87895858 Msa1087240:intron 15.0%
!!! CTACAATCTAAAATAAAAAA+TGG - chr7_2:87895468-87895487 None:intergenic 15.0%
!!! TTTTATTTTAGATTGTAGTA+TGG + chr7_2:87895470-87895489 Msa1087240:intron 15.0%
!! TGTAGGTATTAAAAAAATTT+CGG + chr7_2:87895839-87895858 Msa1087240:intron 15.0%
!! TTGTAAACATATCTATGTAT+TGG - chr7_2:87894838-87894857 None:intergenic 20.0%
!!! TACTACAATCTTTTTTTGAT+TGG + chr7_2:87895503-87895522 Msa1087240:intron 20.0%
!!! AATGTGTTTTTACACAATTT+TGG + chr7_2:87895545-87895564 Msa1087240:intron 20.0%
!! AAAGTAAATCTTCAAATTGA+AGG - chr7_2:87895619-87895638 None:intergenic 20.0%
!! TCATCTAATACTACAAAATA+AGG + chr7_2:87895706-87895725 Msa1087240:intron 20.0%
!!! ATTAGCTTAAATTAAGTTGA+AGG + chr7_2:87895770-87895789 Msa1087240:intron 20.0%
!! TTGTAAACATATCTATGTAT+TGG - chr7_2:87894838-87894857 None:intergenic 20.0%
!!! TACTACAATCTTTTTTTGAT+TGG + chr7_2:87895503-87895522 Msa1087240:intron 20.0%
!!! AATGTGTTTTTACACAATTT+TGG + chr7_2:87895545-87895564 Msa1087240:intron 20.0%
!! AAAGTAAATCTTCAAATTGA+AGG - chr7_2:87895619-87895638 None:intergenic 20.0%
!! TCATCTAATACTACAAAATA+AGG + chr7_2:87895706-87895725 Msa1087240:intron 20.0%
!!! ATTAGCTTAAATTAAGTTGA+AGG + chr7_2:87895770-87895789 Msa1087240:intron 20.0%
! GTATTGGAAAAATATGAAAG+AGG - chr7_2:87894822-87894841 None:intergenic 25.0%
! GATATGTTTACAAGTAACAA+CGG + chr7_2:87894845-87894864 Msa1087240:five_prime_UTR 25.0%
! ATATGTTTACAAGTAACAAC+GGG + chr7_2:87894846-87894865 Msa1087240:five_prime_UTR 25.0%
!!! CAATCTTTTTTTGATTGGTA+TGG + chr7_2:87895508-87895527 Msa1087240:intron 25.0%
! GGAAAACAATAATTAAAACC+TGG - chr7_2:87895598-87895617 None:intergenic 25.0%
!! ATACTACAAAATAAGGCATT+TGG + chr7_2:87895713-87895732 Msa1087240:intron 25.0%
!! AGATTTCAACTTTTGACATT+TGG + chr7_2:87895743-87895762 Msa1087240:intron 25.0%
! GTATTGGAAAAATATGAAAG+AGG - chr7_2:87894822-87894841 None:intergenic 25.0%
! GATATGTTTACAAGTAACAA+CGG + chr7_2:87894845-87894864 Msa1087240:five_prime_UTR 25.0%
! ATATGTTTACAAGTAACAAC+GGG + chr7_2:87894846-87894865 Msa1087240:five_prime_UTR 25.0%
!!! CAATCTTTTTTTGATTGGTA+TGG + chr7_2:87895508-87895527 Msa1087240:intron 25.0%
! GGAAAACAATAATTAAAACC+TGG - chr7_2:87895598-87895617 None:intergenic 25.0%
!! ATACTACAAAATAAGGCATT+TGG + chr7_2:87895713-87895732 Msa1087240:intron 25.0%
!! AGATTTCAACTTTTGACATT+TGG + chr7_2:87895743-87895762 Msa1087240:intron 25.0%
!!! ATATGAAAGAGGTTTTGAGA+TGG - chr7_2:87894811-87894830 None:intergenic 30.0%
TATGTTTACAAGTAACAACG+GGG + chr7_2:87894847-87894866 Msa1087240:five_prime_UTR 30.0%
GAAGAGGAACTTAGATAAAT+GGG + chr7_2:87894957-87894976 Msa1087240:five_prime_UTR 30.0%
! ATAAATGGGTTTGTGAAATG+AGG + chr7_2:87894971-87894990 Msa1087240:exon 30.0%
! TAAATGGGTTTGTGAAATGA+GGG + chr7_2:87894972-87894991 Msa1087240:exon 30.0%
! CAAATCTTAGTCTTCTTGTT+TGG - chr7_2:87895000-87895019 None:intergenic 30.0%
CAAACAAGAAGACTAAGATT+TGG + chr7_2:87894998-87895017 Msa1087240:CDS 30.0%
AGTACAAGACTTTCAATATG+AGG + chr7_2:87895401-87895420 Msa1087240:CDS 30.0%
! ACTTCTAATGTTGAAGTGTT+TGG + chr7_2:87895439-87895458 Msa1087240:intron 30.0%
! AATCTTCTCTTCTCTTTTGT+AGG + chr7_2:87895822-87895841 Msa1087240:intron 30.0%
ATGAAGTTAAATCATTACCC+CGG + chr7_2:87895919-87895938 Msa1087240:intron 30.0%
!!! ATATGAAAGAGGTTTTGAGA+TGG - chr7_2:87894811-87894830 None:intergenic 30.0%
TATGTTTACAAGTAACAACG+GGG + chr7_2:87894847-87894866 Msa1087240:five_prime_UTR 30.0%
GAAGAGGAACTTAGATAAAT+GGG + chr7_2:87894957-87894976 Msa1087240:five_prime_UTR 30.0%
! ATAAATGGGTTTGTGAAATG+AGG + chr7_2:87894971-87894990 Msa1087240:exon 30.0%
! TAAATGGGTTTGTGAAATGA+GGG + chr7_2:87894972-87894991 Msa1087240:exon 30.0%
! CAAATCTTAGTCTTCTTGTT+TGG - chr7_2:87895000-87895019 None:intergenic 30.0%
CAAACAAGAAGACTAAGATT+TGG + chr7_2:87894998-87895017 Msa1087240:CDS 30.0%
AGTACAAGACTTTCAATATG+AGG + chr7_2:87895401-87895420 Msa1087240:CDS 30.0%
! ACTTCTAATGTTGAAGTGTT+TGG + chr7_2:87895439-87895458 Msa1087240:intron 30.0%
! AATCTTCTCTTCTCTTTTGT+AGG + chr7_2:87895822-87895841 Msa1087240:intron 30.0%
ATGAAGTTAAATCATTACCC+CGG + chr7_2:87895919-87895938 Msa1087240:intron 30.0%
TGTTAAGAGAGTGAAGAGTA+AGG - chr7_2:87894755-87894774 None:intergenic 35.0%
GGAAGAGGAACTTAGATAAA+TGG + chr7_2:87894956-87894975 Msa1087240:five_prime_UTR 35.0%
AAGAAGACTAAGATTTGGCT+AGG + chr7_2:87895003-87895022 Msa1087240:CDS 35.0%
! ATGTTGCTTCAATGGCATTA+AGG + chr7_2:87895064-87895083 Msa1087240:CDS 35.0%
! TGTTGCTTCAATGGCATTAA+GGG + chr7_2:87895065-87895084 Msa1087240:CDS 35.0%
TGAGGCAAAAGACATTCAAA+GGG + chr7_2:87895149-87895168 Msa1087240:CDS 35.0%
! CTAGTCATTAAAGTCTTGTC+TGG - chr7_2:87895204-87895223 None:intergenic 35.0%
AATGACTAGTGACATTGACA+CGG + chr7_2:87895215-87895234 Msa1087240:CDS 35.0%
ACAAGACTTTCAATATGAGG+AGG + chr7_2:87895404-87895423 Msa1087240:CDS 35.0%
!! AATATGAGGAGGTATCACTA+TGG + chr7_2:87895415-87895434 Msa1087240:intron 35.0%
!! ACAGACACCGTTTATTTCTA+CGG + chr7_2:87895570-87895589 Msa1087240:intron 35.0%
TGAAGTTAAATCATTACCCC+GGG + chr7_2:87895920-87895939 Msa1087240:intron 35.0%
ATAGATGGTGACAATGGTAA+TGG + chr7_2:87895984-87896003 Msa1087240:intron 35.0%
TGTTAAGAGAGTGAAGAGTA+AGG - chr7_2:87894755-87894774 None:intergenic 35.0%
GGAAGAGGAACTTAGATAAA+TGG + chr7_2:87894956-87894975 Msa1087240:five_prime_UTR 35.0%
AAGAAGACTAAGATTTGGCT+AGG + chr7_2:87895003-87895022 Msa1087240:CDS 35.0%
! ATGTTGCTTCAATGGCATTA+AGG + chr7_2:87895064-87895083 Msa1087240:CDS 35.0%
! TGTTGCTTCAATGGCATTAA+GGG + chr7_2:87895065-87895084 Msa1087240:CDS 35.0%
TGAGGCAAAAGACATTCAAA+GGG + chr7_2:87895149-87895168 Msa1087240:CDS 35.0%
! CTAGTCATTAAAGTCTTGTC+TGG - chr7_2:87895204-87895223 None:intergenic 35.0%
AATGACTAGTGACATTGACA+CGG + chr7_2:87895215-87895234 Msa1087240:CDS 35.0%
ACAAGACTTTCAATATGAGG+AGG + chr7_2:87895404-87895423 Msa1087240:CDS 35.0%
!! AATATGAGGAGGTATCACTA+TGG + chr7_2:87895415-87895434 Msa1087240:intron 35.0%
!! ACAGACACCGTTTATTTCTA+CGG + chr7_2:87895570-87895589 Msa1087240:intron 35.0%
TGAAGTTAAATCATTACCCC+GGG + chr7_2:87895920-87895939 Msa1087240:intron 35.0%
ATAGATGGTGACAATGGTAA+TGG + chr7_2:87895984-87896003 Msa1087240:intron 35.0%
!!! GAAAGAGGTTTTGAGATGGA+AGG - chr7_2:87894807-87894826 None:intergenic 40.0%
TTTACAAGTAACAACGGGGA+GGG + chr7_2:87894851-87894870 Msa1087240:five_prime_UTR 40.0%
GTTGCTTCAATGGCATTAAG+GGG + chr7_2:87895066-87895085 Msa1087240:CDS 40.0%
! TTGAATGTCTTTTGCCTCAG+CGG - chr7_2:87895148-87895167 None:intergenic 40.0%
CTGAGGCAAAAGACATTCAA+AGG + chr7_2:87895148-87895167 Msa1087240:CDS 40.0%
TGTTGAAGTCGAAGAAGAAG+AGG + chr7_2:87895293-87895312 Msa1087240:CDS 40.0%
TGTTGAATATGCCAGAGTTG+TGG + chr7_2:87895319-87895338 Msa1087240:CDS 40.0%
AATGTCCCCTACACATAGTA+TGG + chr7_2:87895356-87895375 Msa1087240:CDS 40.0%
ATGCTCCATACTATGTGTAG+GGG - chr7_2:87895364-87895383 None:intergenic 40.0%
CATGCTCCATACTATGTGTA+GGG - chr7_2:87895365-87895384 None:intergenic 40.0%
TCATGCTCCATACTATGTGT+AGG - chr7_2:87895366-87895385 None:intergenic 40.0%
CCTGGAACCGTAGAAATAAA+CGG - chr7_2:87895580-87895599 None:intergenic 40.0%
AAATTTCGGCTGCAATGACT+TGG + chr7_2:87895853-87895872 Msa1087240:intron 40.0%
AAGTCGGTATGAGAAATGAG+AGG + chr7_2:87896086-87896105 Msa1087240:intron 40.0%
! AGGTGTGTGTAAGAAAGTGT+GGG + chr7_2:87896106-87896125 Msa1087240:intron 40.0%
GGAAAGTGAATCATACCTTG+AGG + chr7_2:87896127-87896146 Msa1087240:intron 40.0%
AAGCAAGGTCACCCTTATAT+TGG + chr7_2:87896153-87896172 Msa1087240:intron 40.0%
CCATACACGTGCCAATATAA+GGG - chr7_2:87896167-87896186 None:intergenic 40.0%
ACCATACACGTGCCAATATA+AGG - chr7_2:87896168-87896187 None:intergenic 40.0%
CTAATCCCATAGTGACAAGT+GGG - chr7_2:87896305-87896324 None:intergenic 40.0%
!!! GAAAGAGGTTTTGAGATGGA+AGG - chr7_2:87894807-87894826 None:intergenic 40.0%
TTTACAAGTAACAACGGGGA+GGG + chr7_2:87894851-87894870 Msa1087240:five_prime_UTR 40.0%
GTTGCTTCAATGGCATTAAG+GGG + chr7_2:87895066-87895085 Msa1087240:CDS 40.0%
! TTGAATGTCTTTTGCCTCAG+CGG - chr7_2:87895148-87895167 None:intergenic 40.0%
CTGAGGCAAAAGACATTCAA+AGG + chr7_2:87895148-87895167 Msa1087240:CDS 40.0%
TGTTGAAGTCGAAGAAGAAG+AGG + chr7_2:87895293-87895312 Msa1087240:CDS 40.0%
TGTTGAATATGCCAGAGTTG+TGG + chr7_2:87895319-87895338 Msa1087240:CDS 40.0%
AATGTCCCCTACACATAGTA+TGG + chr7_2:87895356-87895375 Msa1087240:CDS 40.0%
ATGCTCCATACTATGTGTAG+GGG - chr7_2:87895364-87895383 None:intergenic 40.0%
CATGCTCCATACTATGTGTA+GGG - chr7_2:87895365-87895384 None:intergenic 40.0%
TCATGCTCCATACTATGTGT+AGG - chr7_2:87895366-87895385 None:intergenic 40.0%
CCTGGAACCGTAGAAATAAA+CGG - chr7_2:87895580-87895599 None:intergenic 40.0%
AAATTTCGGCTGCAATGACT+TGG + chr7_2:87895853-87895872 Msa1087240:intron 40.0%
AAGTCGGTATGAGAAATGAG+AGG + chr7_2:87896086-87896105 Msa1087240:intron 40.0%
! AGGTGTGTGTAAGAAAGTGT+GGG + chr7_2:87896106-87896125 Msa1087240:intron 40.0%
GGAAAGTGAATCATACCTTG+AGG + chr7_2:87896127-87896146 Msa1087240:intron 40.0%
AAGCAAGGTCACCCTTATAT+TGG + chr7_2:87896153-87896172 Msa1087240:intron 40.0%
CCATACACGTGCCAATATAA+GGG - chr7_2:87896167-87896186 None:intergenic 40.0%
ACCATACACGTGCCAATATA+AGG - chr7_2:87896168-87896187 None:intergenic 40.0%
CTAATCCCATAGTGACAAGT+GGG - chr7_2:87896305-87896324 None:intergenic 40.0%
GATGGTGCTCAAGATAGAGT+TGG - chr7_2:87894785-87894804 None:intergenic 45.0%
!!! GAGGTTTTGAGATGGAAGGA+TGG - chr7_2:87894803-87894822 None:intergenic 45.0%
GTTTACAAGTAACAACGGGG+AGG + chr7_2:87894850-87894869 Msa1087240:five_prime_UTR 45.0%
TTACAAGTAACAACGGGGAG+GGG + chr7_2:87894852-87894871 Msa1087240:five_prime_UTR 45.0%
!!! TGGTTTTTTTGGGCAACTCG+CGG - chr7_2:87894885-87894904 None:intergenic 45.0%
AGTTGCCCAAAAAAACCAGC+AGG + chr7_2:87894887-87894906 Msa1087240:five_prime_UTR 45.0%
GTTGCCCAAAAAAACCAGCA+GGG + chr7_2:87894888-87894907 Msa1087240:five_prime_UTR 45.0%
!!! TCCTCCCTGCTGGTTTTTTT+GGG - chr7_2:87894895-87894914 None:intergenic 45.0%
!!! TTCCTCCCTGCTGGTTTTTT+TGG - chr7_2:87894896-87894915 None:intergenic 45.0%
TTAAACTTCTTCCTCCCTGC+TGG - chr7_2:87894905-87894924 None:intergenic 45.0%
AGCAGGGAGGAAGAAGTTTA+AGG + chr7_2:87894904-87894923 Msa1087240:five_prime_UTR 45.0%
TTCCTCACACCCTATATACC+GGG - chr7_2:87894940-87894959 None:intergenic 45.0%
CTTCCTCACACCCTATATAC+CGG - chr7_2:87894941-87894960 None:intergenic 45.0%
GTATATAGGGTGTGAGGAAG+AGG + chr7_2:87894941-87894960 Msa1087240:five_prime_UTR 45.0%
TTGAAGCAACATCATGTGCC+CGG - chr7_2:87895056-87895075 None:intergenic 45.0%
! GGCACATGATGTTGCTTCAA+TGG + chr7_2:87895056-87895075 Msa1087240:CDS 45.0%
CTGTCTCAACTTTGCAGACT+CGG + chr7_2:87895098-87895117 Msa1087240:CDS 45.0%
TAGTGACATTGACACGGTTG+TGG + chr7_2:87895221-87895240 Msa1087240:CDS 45.0%
TGAATATGCCAGAGTTGTGG+AGG + chr7_2:87895322-87895341 Msa1087240:CDS 45.0%
!! CCGTTTATTTCTACGGTTCC+AGG + chr7_2:87895577-87895596 Msa1087240:intron 45.0%
!!! TAACGGACTACTTTTGACCC+GGG - chr7_2:87895940-87895959 None:intergenic 45.0%
!!! CTAACGGACTACTTTTGACC+CGG - chr7_2:87895941-87895960 None:intergenic 45.0%
GGACGGATCAGTTACACTAA+CGG - chr7_2:87895957-87895976 None:intergenic 45.0%
TTGTCACCATCTATTCCCAC+TGG - chr7_2:87895978-87895997 None:intergenic 45.0%
GTGGGAATAGATGGTGACAA+TGG + chr7_2:87895978-87895997 Msa1087240:intron 45.0%
!! ATGGTAATGGCATAGTGCTC+TGG + chr7_2:87895997-87896016 Msa1087240:intron 45.0%
TTAGCACTCGACGATCAAGT+CGG + chr7_2:87896070-87896089 Msa1087240:intron 45.0%
GAGGTGTGTGTAAGAAAGTG+TGG + chr7_2:87896105-87896124 Msa1087240:intron 45.0%
CATACCTTGAGGATGAAGCA+AGG + chr7_2:87896138-87896157 Msa1087240:intron 45.0%
CCCTTATATTGGCACGTGTA+TGG + chr7_2:87896164-87896183 Msa1087240:intron 45.0%
TCAGGCGATGTTCCTTAAGT+CGG + chr7_2:87896268-87896287 Msa1087240:intron 45.0%
CTTTGCCCACTTGTCACTAT+GGG + chr7_2:87896297-87896316 Msa1087240:CDS 45.0%
GCTAATCCCATAGTGACAAG+TGG - chr7_2:87896306-87896325 None:intergenic 45.0%
!! TCACTATGGGATTAGCCTCA+TGG + chr7_2:87896310-87896329 Msa1087240:CDS 45.0%
!! TATGGGATTAGCCTCATGGT+CGG + chr7_2:87896314-87896333 Msa1087240:CDS 45.0%
GATGGTGCTCAAGATAGAGT+TGG - chr7_2:87894785-87894804 None:intergenic 45.0%
!!! GAGGTTTTGAGATGGAAGGA+TGG - chr7_2:87894803-87894822 None:intergenic 45.0%
GTTTACAAGTAACAACGGGG+AGG + chr7_2:87894850-87894869 Msa1087240:five_prime_UTR 45.0%
TTACAAGTAACAACGGGGAG+GGG + chr7_2:87894852-87894871 Msa1087240:five_prime_UTR 45.0%
!!! TGGTTTTTTTGGGCAACTCG+CGG - chr7_2:87894885-87894904 None:intergenic 45.0%
AGTTGCCCAAAAAAACCAGC+AGG + chr7_2:87894887-87894906 Msa1087240:five_prime_UTR 45.0%
GTTGCCCAAAAAAACCAGCA+GGG + chr7_2:87894888-87894907 Msa1087240:five_prime_UTR 45.0%
!!! TCCTCCCTGCTGGTTTTTTT+GGG - chr7_2:87894895-87894914 None:intergenic 45.0%
!!! TTCCTCCCTGCTGGTTTTTT+TGG - chr7_2:87894896-87894915 None:intergenic 45.0%
TTAAACTTCTTCCTCCCTGC+TGG - chr7_2:87894905-87894924 None:intergenic 45.0%
AGCAGGGAGGAAGAAGTTTA+AGG + chr7_2:87894904-87894923 Msa1087240:five_prime_UTR 45.0%
TTCCTCACACCCTATATACC+GGG - chr7_2:87894940-87894959 None:intergenic 45.0%
CTTCCTCACACCCTATATAC+CGG - chr7_2:87894941-87894960 None:intergenic 45.0%
GTATATAGGGTGTGAGGAAG+AGG + chr7_2:87894941-87894960 Msa1087240:five_prime_UTR 45.0%
TTGAAGCAACATCATGTGCC+CGG - chr7_2:87895056-87895075 None:intergenic 45.0%
! GGCACATGATGTTGCTTCAA+TGG + chr7_2:87895056-87895075 Msa1087240:CDS 45.0%
CTGTCTCAACTTTGCAGACT+CGG + chr7_2:87895098-87895117 Msa1087240:CDS 45.0%
TAGTGACATTGACACGGTTG+TGG + chr7_2:87895221-87895240 Msa1087240:CDS 45.0%
TGAATATGCCAGAGTTGTGG+AGG + chr7_2:87895322-87895341 Msa1087240:CDS 45.0%
!! CCGTTTATTTCTACGGTTCC+AGG + chr7_2:87895577-87895596 Msa1087240:intron 45.0%
!!! TAACGGACTACTTTTGACCC+GGG - chr7_2:87895940-87895959 None:intergenic 45.0%
!!! CTAACGGACTACTTTTGACC+CGG - chr7_2:87895941-87895960 None:intergenic 45.0%
GGACGGATCAGTTACACTAA+CGG - chr7_2:87895957-87895976 None:intergenic 45.0%
TTGTCACCATCTATTCCCAC+TGG - chr7_2:87895978-87895997 None:intergenic 45.0%
GTGGGAATAGATGGTGACAA+TGG + chr7_2:87895978-87895997 Msa1087240:intron 45.0%
!! ATGGTAATGGCATAGTGCTC+TGG + chr7_2:87895997-87896016 Msa1087240:intron 45.0%
TTAGCACTCGACGATCAAGT+CGG + chr7_2:87896070-87896089 Msa1087240:intron 45.0%
GAGGTGTGTGTAAGAAAGTG+TGG + chr7_2:87896105-87896124 Msa1087240:intron 45.0%
CATACCTTGAGGATGAAGCA+AGG + chr7_2:87896138-87896157 Msa1087240:intron 45.0%
CCCTTATATTGGCACGTGTA+TGG + chr7_2:87896164-87896183 Msa1087240:intron 45.0%
TCAGGCGATGTTCCTTAAGT+CGG + chr7_2:87896268-87896287 Msa1087240:intron 45.0%
CTTTGCCCACTTGTCACTAT+GGG + chr7_2:87896297-87896316 Msa1087240:CDS 45.0%
GCTAATCCCATAGTGACAAG+TGG - chr7_2:87896306-87896325 None:intergenic 45.0%
!! TCACTATGGGATTAGCCTCA+TGG + chr7_2:87896310-87896329 Msa1087240:CDS 45.0%
!! TATGGGATTAGCCTCATGGT+CGG + chr7_2:87896314-87896333 Msa1087240:CDS 45.0%
! CACTTTTCCAACTGCCGAGA+TGG + chr7_2:87895026-87895045 Msa1087240:CDS 50.0%
TGAAGCAACATCATGTGCCC+GGG - chr7_2:87895055-87895074 None:intergenic 50.0%
CGAGTCTGCAAAGTTGAGAC+AGG - chr7_2:87895100-87895119 None:intergenic 50.0%
!! TCAACTTTGCAGACTCGGTG+TGG + chr7_2:87895103-87895122 Msa1087240:CDS 50.0%
! AATGTCTTTTGCCTCAGCGG+TGG - chr7_2:87895145-87895164 None:intergenic 50.0%
CTTGTCTGGTCTGAAAGCCT+CGG - chr7_2:87895190-87895209 None:intergenic 50.0%
TGTCGTTGCAGTGGAAGAAG+AGG + chr7_2:87895248-87895267 Msa1087240:CDS 50.0%
GCCAGAGTTGTGGAGGAATA+TGG + chr7_2:87895329-87895348 Msa1087240:CDS 50.0%
GCCATATTCCTCCACAACTC+TGG - chr7_2:87895333-87895352 None:intergenic 50.0%
!!! AACGGACTACTTTTGACCCG+GGG - chr7_2:87895939-87895958 None:intergenic 50.0%
AGTGTAACTGATCCGTCCAG+TGG + chr7_2:87895959-87895978 Msa1087240:intron 50.0%
GTGTAACTGATCCGTCCAGT+GGG + chr7_2:87895960-87895979 Msa1087240:intron 50.0%
ATCCGTCCAGTGGGAATAGA+TGG + chr7_2:87895969-87895988 Msa1087240:intron 50.0%
CACCATCTATTCCCACTGGA+CGG - chr7_2:87895974-87895993 None:intergenic 50.0%
GCGATGGTGAAGTGATCTTG+CGG + chr7_2:87896021-87896040 Msa1087240:intron 50.0%
ATGGTGAAGTGATCTTGCGG+TGG + chr7_2:87896024-87896043 Msa1087240:intron 50.0%
TGGTGAAGTGATCTTGCGGT+GGG + chr7_2:87896025-87896044 Msa1087240:intron 50.0%
TGATCTTGCGGTGGGATGAA+AGG + chr7_2:87896033-87896052 Msa1087240:intron 50.0%
GTGACCTTGCTTCATCCTCA+AGG - chr7_2:87896145-87896164 None:intergenic 50.0%
GTGTATGGTGCTTGATGCGT+GGG + chr7_2:87896179-87896198 Msa1087240:intron 50.0%
GCTTTGCCCACTTGTCACTA+TGG + chr7_2:87896296-87896315 Msa1087240:CDS 50.0%
! CACTTTTCCAACTGCCGAGA+TGG + chr7_2:87895026-87895045 Msa1087240:CDS 50.0%
TGAAGCAACATCATGTGCCC+GGG - chr7_2:87895055-87895074 None:intergenic 50.0%
CGAGTCTGCAAAGTTGAGAC+AGG - chr7_2:87895100-87895119 None:intergenic 50.0%
!! TCAACTTTGCAGACTCGGTG+TGG + chr7_2:87895103-87895122 Msa1087240:CDS 50.0%
! AATGTCTTTTGCCTCAGCGG+TGG - chr7_2:87895145-87895164 None:intergenic 50.0%
CTTGTCTGGTCTGAAAGCCT+CGG - chr7_2:87895190-87895209 None:intergenic 50.0%
TGTCGTTGCAGTGGAAGAAG+AGG + chr7_2:87895248-87895267 Msa1087240:CDS 50.0%
GCCAGAGTTGTGGAGGAATA+TGG + chr7_2:87895329-87895348 Msa1087240:CDS 50.0%
GCCATATTCCTCCACAACTC+TGG - chr7_2:87895333-87895352 None:intergenic 50.0%
!!! AACGGACTACTTTTGACCCG+GGG - chr7_2:87895939-87895958 None:intergenic 50.0%
AGTGTAACTGATCCGTCCAG+TGG + chr7_2:87895959-87895978 Msa1087240:intron 50.0%
GTGTAACTGATCCGTCCAGT+GGG + chr7_2:87895960-87895979 Msa1087240:intron 50.0%
ATCCGTCCAGTGGGAATAGA+TGG + chr7_2:87895969-87895988 Msa1087240:intron 50.0%
CACCATCTATTCCCACTGGA+CGG - chr7_2:87895974-87895993 None:intergenic 50.0%
GCGATGGTGAAGTGATCTTG+CGG + chr7_2:87896021-87896040 Msa1087240:intron 50.0%
ATGGTGAAGTGATCTTGCGG+TGG + chr7_2:87896024-87896043 Msa1087240:intron 50.0%
TGGTGAAGTGATCTTGCGGT+GGG + chr7_2:87896025-87896044 Msa1087240:intron 50.0%
TGATCTTGCGGTGGGATGAA+AGG + chr7_2:87896033-87896052 Msa1087240:intron 50.0%
GTGACCTTGCTTCATCCTCA+AGG - chr7_2:87896145-87896164 None:intergenic 50.0%
GTGTATGGTGCTTGATGCGT+GGG + chr7_2:87896179-87896198 Msa1087240:intron 50.0%
GCTTTGCCCACTTGTCACTA+TGG + chr7_2:87896296-87896315 Msa1087240:CDS 50.0%
GCCCAAAAAAACCAGCAGGG+AGG + chr7_2:87894891-87894910 Msa1087240:five_prime_UTR 55.0%
GTTTAAGGAGACTCGCCACC+CGG + chr7_2:87894919-87894938 Msa1087240:five_prime_UTR 55.0%
AGACTCGCCACCCGGTATAT+AGG + chr7_2:87894927-87894946 Msa1087240:five_prime_UTR 55.0%
GACTCGCCACCCGGTATATA+GGG + chr7_2:87894928-87894947 Msa1087240:five_prime_UTR 55.0%
CTCACACCCTATATACCGGG+TGG - chr7_2:87894937-87894956 None:intergenic 55.0%
CACCCGGTATATAGGGTGTG+AGG + chr7_2:87894935-87894954 Msa1087240:five_prime_UTR 55.0%
!! ACTTTGCAGACTCGGTGTGG+AGG + chr7_2:87895106-87895125 Msa1087240:CDS 55.0%
TGTGGCTGTTGTCGTTGCAG+TGG + chr7_2:87895239-87895258 Msa1087240:CDS 55.0%
CGTGTATGGTGCTTGATGCG+TGG + chr7_2:87896178-87896197 Msa1087240:intron 55.0%
TATGGTGCTTGATGCGTGGG+TGG + chr7_2:87896182-87896201 Msa1087240:intron 55.0%
ATGGTGCTTGATGCGTGGGT+GGG + chr7_2:87896183-87896202 Msa1087240:intron 55.0%
GACTGTCGGTGTGGTCTTTC+AGG + chr7_2:87896250-87896269 Msa1087240:intron 55.0%
GGCGATGTTCCTTAAGTCGG+TGG + chr7_2:87896271-87896290 Msa1087240:intron 55.0%
!! GCAAAGCGTCCACCGACTTA+AGG - chr7_2:87896283-87896302 None:intergenic 55.0%
ACTGTTTCGGACCGACCATG+AGG - chr7_2:87896328-87896347 None:intergenic 55.0%
GCCCAAAAAAACCAGCAGGG+AGG + chr7_2:87894891-87894910 Msa1087240:five_prime_UTR 55.0%
GTTTAAGGAGACTCGCCACC+CGG + chr7_2:87894919-87894938 Msa1087240:five_prime_UTR 55.0%
AGACTCGCCACCCGGTATAT+AGG + chr7_2:87894927-87894946 Msa1087240:five_prime_UTR 55.0%
GACTCGCCACCCGGTATATA+GGG + chr7_2:87894928-87894947 Msa1087240:five_prime_UTR 55.0%
CTCACACCCTATATACCGGG+TGG - chr7_2:87894937-87894956 None:intergenic 55.0%
CACCCGGTATATAGGGTGTG+AGG + chr7_2:87894935-87894954 Msa1087240:five_prime_UTR 55.0%
!! ACTTTGCAGACTCGGTGTGG+AGG + chr7_2:87895106-87895125 Msa1087240:CDS 55.0%
TGTGGCTGTTGTCGTTGCAG+TGG + chr7_2:87895239-87895258 Msa1087240:CDS 55.0%
CGTGTATGGTGCTTGATGCG+TGG + chr7_2:87896178-87896197 Msa1087240:intron 55.0%
TATGGTGCTTGATGCGTGGG+TGG + chr7_2:87896182-87896201 Msa1087240:intron 55.0%
ATGGTGCTTGATGCGTGGGT+GGG + chr7_2:87896183-87896202 Msa1087240:intron 55.0%
GACTGTCGGTGTGGTCTTTC+AGG + chr7_2:87896250-87896269 Msa1087240:intron 55.0%
GGCGATGTTCCTTAAGTCGG+TGG + chr7_2:87896271-87896290 Msa1087240:intron 55.0%
!! GCAAAGCGTCCACCGACTTA+AGG - chr7_2:87896283-87896302 None:intergenic 55.0%
ACTGTTTCGGACCGACCATG+AGG - chr7_2:87896328-87896347 None:intergenic 55.0%
CAAGTAACAACGGGGAGGGG+CGG + chr7_2:87894855-87894874 Msa1087240:five_prime_UTR 60.0%
TCCTATTCCTGCCACCGCTG+AGG + chr7_2:87895131-87895150 Msa1087240:CDS 60.0%
! TCTTTTGCCTCAGCGGTGGC+AGG - chr7_2:87895141-87895160 None:intergenic 60.0%
GGCATAGTGCTCTGGTGCGA+TGG + chr7_2:87896005-87896024 Msa1087240:intron 60.0%
TGGTGCTTGATGCGTGGGTG+GGG + chr7_2:87896184-87896203 Msa1087240:intron 60.0%
GGGGTAAGGCGTACGACTGT+CGG + chr7_2:87896236-87896255 Msa1087240:intron 60.0%
AAGGCGTACGACTGTCGGTG+TGG + chr7_2:87896241-87896260 Msa1087240:intron 60.0%
CAAGTAACAACGGGGAGGGG+CGG + chr7_2:87894855-87894874 Msa1087240:five_prime_UTR 60.0%
TCCTATTCCTGCCACCGCTG+AGG + chr7_2:87895131-87895150 Msa1087240:CDS 60.0%
! TCTTTTGCCTCAGCGGTGGC+AGG - chr7_2:87895141-87895160 None:intergenic 60.0%
GGCATAGTGCTCTGGTGCGA+TGG + chr7_2:87896005-87896024 Msa1087240:intron 60.0%
TGGTGCTTGATGCGTGGGTG+GGG + chr7_2:87896184-87896203 Msa1087240:intron 60.0%
GGGGTAAGGCGTACGACTGT+CGG + chr7_2:87896236-87896255 Msa1087240:intron 60.0%
AAGGCGTACGACTGTCGGTG+TGG + chr7_2:87896241-87896260 Msa1087240:intron 60.0%
CAACTGCCGAGATGGCAGCC+CGG + chr7_2:87895034-87895053 Msa1087240:CDS 65.0%
AACTGCCGAGATGGCAGCCC+GGG + chr7_2:87895035-87895054 Msa1087240:CDS 65.0%
ATGTGCCCGGGCTGCCATCT+CGG - chr7_2:87895043-87895062 None:intergenic 65.0%
GCCTCAGCGGTGGCAGGAAT+AGG - chr7_2:87895135-87895154 None:intergenic 65.0%
GGTGCTTGATGCGTGGGTGG+GGG + chr7_2:87896185-87896204 Msa1087240:intron 65.0%
GTGCTTGATGCGTGGGTGGG+GGG + chr7_2:87896186-87896205 Msa1087240:intron 65.0%
TTGATGCGTGGGTGGGGGGT+GGG + chr7_2:87896190-87896209 Msa1087240:intron 65.0%
CAACTGCCGAGATGGCAGCC+CGG + chr7_2:87895034-87895053 Msa1087240:CDS 65.0%
AACTGCCGAGATGGCAGCCC+GGG + chr7_2:87895035-87895054 Msa1087240:CDS 65.0%
ATGTGCCCGGGCTGCCATCT+CGG - chr7_2:87895043-87895062 None:intergenic 65.0%
GCCTCAGCGGTGGCAGGAAT+AGG - chr7_2:87895135-87895154 None:intergenic 65.0%
GGTGCTTGATGCGTGGGTGG+GGG + chr7_2:87896185-87896204 Msa1087240:intron 65.0%
GTGCTTGATGCGTGGGTGGG+GGG + chr7_2:87896186-87896205 Msa1087240:intron 65.0%
TTGATGCGTGGGTGGGGGGT+GGG + chr7_2:87896190-87896209 Msa1087240:intron 65.0%
CGGGCTGCCATCTCGGCAGT+TGG - chr7_2:87895036-87895055 None:intergenic 70.0%
GGCAGCTGCAGAAGCTGCCG+AGG + chr7_2:87895170-87895189 Msa1087240:CDS 70.0%
CTTGATGCGTGGGTGGGGGG+TGG + chr7_2:87896189-87896208 Msa1087240:intron 70.0%
TGATGCGTGGGTGGGGGGTG+GGG + chr7_2:87896191-87896210 Msa1087240:intron 70.0%
!! GGGGGCGTTCGAGTGGGGTA+AGG + chr7_2:87896222-87896241 Msa1087240:intron 70.0%
CGGGCTGCCATCTCGGCAGT+TGG - chr7_2:87895036-87895055 None:intergenic 70.0%
GGCAGCTGCAGAAGCTGCCG+AGG + chr7_2:87895170-87895189 Msa1087240:CDS 70.0%
CTTGATGCGTGGGTGGGGGG+TGG + chr7_2:87896189-87896208 Msa1087240:intron 70.0%
TGATGCGTGGGTGGGGGGTG+GGG + chr7_2:87896191-87896210 Msa1087240:intron 70.0%
!! GGGGGCGTTCGAGTGGGGTA+AGG + chr7_2:87896222-87896241 Msa1087240:intron 70.0%
!! GGGGAGGGGGGCGTTCGAGT+GGG + chr7_2:87896216-87896235 Msa1087240:intron 75.0%
!! GGGAGGGGGGCGTTCGAGTG+GGG + chr7_2:87896217-87896236 Msa1087240:intron 75.0%
!! GGGGAGGGGGGCGTTCGAGT+GGG + chr7_2:87896216-87896235 Msa1087240:intron 75.0%
!! GGGAGGGGGGCGTTCGAGTG+GGG + chr7_2:87896217-87896236 Msa1087240:intron 75.0%
! TGCGTGGGTGGGGGGTGGGG+TGG + chr7_2:87896194-87896213 Msa1087240:intron 80.0%
! GCGTGGGTGGGGGGTGGGGT+GGG + chr7_2:87896195-87896214 Msa1087240:intron 80.0%
! CGTGGGTGGGGGGTGGGGTG+GGG + chr7_2:87896196-87896215 Msa1087240:intron 80.0%
! GTGGGTGGGGGGTGGGGTGG+GGG + chr7_2:87896197-87896216 Msa1087240:intron 80.0%
! GTGGGGGGTGGGGTGGGGGA+GGG + chr7_2:87896201-87896220 Msa1087240:intron 80.0%
! TGGGGGGTGGGGTGGGGGAG+GGG + chr7_2:87896202-87896221 Msa1087240:intron 80.0%
!!! GGGGGAGGGGGGCGTTCGAG+TGG + chr7_2:87896215-87896234 Msa1087240:intron 80.0%
! TGCGTGGGTGGGGGGTGGGG+TGG + chr7_2:87896194-87896213 Msa1087240:intron 80.0%
! GCGTGGGTGGGGGGTGGGGT+GGG + chr7_2:87896195-87896214 Msa1087240:intron 80.0%
! CGTGGGTGGGGGGTGGGGTG+GGG + chr7_2:87896196-87896215 Msa1087240:intron 80.0%
! GTGGGTGGGGGGTGGGGTGG+GGG + chr7_2:87896197-87896216 Msa1087240:intron 80.0%
! GTGGGGGGTGGGGTGGGGGA+GGG + chr7_2:87896201-87896220 Msa1087240:intron 80.0%
! TGGGGGGTGGGGTGGGGGAG+GGG + chr7_2:87896202-87896221 Msa1087240:intron 80.0%
!!! GGGGGAGGGGGGCGTTCGAG+TGG + chr7_2:87896215-87896234 Msa1087240:intron 80.0%
! GGTGGGGGGTGGGGTGGGGG+AGG + chr7_2:87896200-87896219 Msa1087240:intron 85.0%
! GGGGGGTGGGGTGGGGGAGG+GGG + chr7_2:87896203-87896222 Msa1087240:intron 85.0%
! GGGGGTGGGGTGGGGGAGGG+GGG + chr7_2:87896204-87896223 Msa1087240:intron 85.0%
! GGTGGGGGGTGGGGTGGGGG+AGG + chr7_2:87896200-87896219 Msa1087240:intron 85.0%
! GGGGGGTGGGGTGGGGGAGG+GGG + chr7_2:87896203-87896222 Msa1087240:intron 85.0%
! GGGGGTGGGGTGGGGGAGGG+GGG + chr7_2:87896204-87896223 Msa1087240:intron 85.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 87894746 87896349 87894746 ID=Msa1087240;Name=Msa1087240
chr7_2 mRNA 87894746 87896349 87894746 ID=Msa1087240-mRNA-1;Parent=Msa1087240;Name=Msa1087240-mRNA-1;_AED=0.23;_eAED=0.23;_QI=242|0|0.5|0.5|1|1|2|0|171
chr7_2 exon 87894746 87895425 87894746 ID=Msa1087240-mRNA-1:exon:24033;Parent=Msa1087240-mRNA-1
chr7_2 exon 87896272 87896349 87896272 ID=Msa1087240-mRNA-1:exon:24034;Parent=Msa1087240-mRNA-1
chr7_2 five_prime_UTR 87894746 87894987 87894746 ID=Msa1087240-mRNA-1:five_prime_utr;Parent=Msa1087240-mRNA-1
chr7_2 CDS 87894988 87895425 87894988 ID=Msa1087240-mRNA-1:cds;Parent=Msa1087240-mRNA-1
chr7_2 CDS 87896272 87896349 87896272 ID=Msa1087240-mRNA-1:cds;Parent=Msa1087240-mRNA-1
Gene Sequence

>Msa1087240

ATGAGGGAGCCAAACAAGAAGACTAAGATTTGGCTAGGCACTTTTCCAACTGCCGAGATGGCAGCCCGGGCACATGATGTTGCTTCAATGGCATTAAGGGGACGCTACGCCTGTCTCAACTTTGCAGACTCGGTGTGGAGGCTTCCTATTCCTGCCACCGCTGAGGCAAAAGACATTCAAAGGGCAGCTGCAGAAGCTGCCGAGGCTTTCAGACCAGACAAGACTTTAATGACTAGTGACATTGACACGGTTGTGGCTGTTGTCGTTGCAGTGGAAGAAGAGGAAGAACTGTTGAATATGTTTTGTGTTGAAGTCGAAGAAGAAGAGGAAGTGTTGAATATGCCAGAGTTGTGGAGGAATATGGCACTAATGTCCCCTACACATAGTATGGAGCATGAGTATGAAGATTTTGAAGTACAAGACTTTCAATATGAGGAGGCGATGTTCCTTAAGTCGGTGGACGCTTTGCCCACTTGTCACTATGGGATTAGCCTCATGGTCGGTCCGAAACAGTAA
Protein sequence

>Msa1087240

MREPNKKTKIWLGTFPTAEMAARAHDVASMALRGRYACLNFADSVWRLPIPATAEAKDIQRAAAEAAEAFRPDKTLMTSDIDTVVAVVVAVEEEEELLNMFCVEVEEEEEVLNMPELWRNMALMSPTHSMEHEYEDFEVQDFQYEEAMFLKSVDALPTCHYGISLMVGPKQ*