Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378470 | XP_003605778.1 | 77.027 | 74 | 16 | 1 | 9 | 81 | 43 | 116 | 5.40e-31 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378470 | B7FMD2 | 77.027 | 74 | 16 | 1 | 9 | 81 | 43 | 116 | 2.58e-31 | 115 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1378470 | 0.808500 | 3.004495e-50 | -8.615850e-47 |
| Msa0008850 | Msa1378470 | 0.837511 | 4.979657e-57 | -8.615850e-47 |
| Msa0014410 | Msa1378470 | 0.865694 | 4.903379e-65 | -8.615850e-47 |
| Msa0017120 | Msa1378470 | 0.806351 | 8.580898e-50 | -8.615850e-47 |
| Msa0020630 | Msa1378470 | 0.848705 | 5.170776e-60 | -8.615850e-47 |
| Msa0027540 | Msa1378470 | 0.804450 | 2.148224e-49 | -8.615850e-47 |
| Msa0035400 | Msa1378470 | 0.818346 | 2.055977e-52 | -8.615850e-47 |
| Msa0037820 | Msa1378470 | 0.803284 | 3.752010e-49 | -8.615850e-47 |
| Msa0038310 | Msa1378470 | 0.826466 | 2.671288e-54 | -8.615850e-47 |
| Msa0040550 | Msa1378470 | -0.808482 | 3.031092e-50 | -8.615850e-47 |
| Msa0043940 | Msa1378470 | 0.855437 | 6.311310e-62 | -8.615850e-47 |
| Msa0044180 | Msa1378470 | 0.806323 | 8.697643e-50 | -8.615850e-47 |
| Msa0044710 | Msa1378470 | 0.864558 | 1.115063e-64 | -8.615850e-47 |
| Msa0047470 | Msa1378470 | 0.819931 | 8.960946e-53 | -8.615850e-47 |
| Msa0050720 | Msa1378470 | 0.832498 | 9.134819e-56 | -8.615850e-47 |
| Msa0050770 | Msa1378470 | 0.826937 | 2.062032e-54 | -8.615850e-47 |
| Msa0055280 | Msa1378470 | 0.802639 | 5.098505e-49 | -8.615850e-47 |
| Msa0061600 | Msa1378470 | -0.801065 | 1.073559e-48 | -8.615850e-47 |
| Msa0064550 | Msa1378470 | 0.865451 | 5.849255e-65 | -8.615850e-47 |
| Msa0067150 | Msa1378470 | 0.808700 | 2.723369e-50 | -8.615850e-47 |
| Msa0068410 | Msa1378470 | 0.851146 | 1.073160e-60 | -8.615850e-47 |
| Msa0075310 | Msa1378470 | 0.810743 | 9.904881e-51 | -8.615850e-47 |
| Msa0079770 | Msa1378470 | 0.828829 | 7.233783e-55 | -8.615850e-47 |
| Msa0083160 | Msa1378470 | 0.816553 | 5.211864e-52 | -8.615850e-47 |
| Msa0084680 | Msa1378470 | 0.841718 | 4.008992e-58 | -8.615850e-47 |
| Msa0090860 | Msa1378470 | 0.820368 | 7.116084e-53 | -8.615850e-47 |
| Msa0091480 | Msa1378470 | 0.805385 | 1.369334e-49 | -8.615850e-47 |
| Msa0092710 | Msa1378470 | 0.843360 | 1.469715e-58 | -8.615850e-47 |
| Msa0101060 | Msa1378470 | 0.807667 | 4.520134e-50 | -8.615850e-47 |
| Msa0108070 | Msa1378470 | 0.810919 | 9.072825e-51 | -8.615850e-47 |
| Msa0109490 | Msa1378470 | 0.858421 | 8.334921e-63 | -8.615850e-47 |
| Msa0114240 | Msa1378470 | 0.836720 | 7.931267e-57 | -8.615850e-47 |
| Msa0114250 | Msa1378470 | 0.824967 | 6.057754e-54 | -8.615850e-47 |
| Msa1349360 | Msa1378470 | 0.813569 | 2.394817e-51 | -8.615850e-47 |
| Msa1349810 | Msa1378470 | 0.835150 | 1.984400e-56 | -8.615850e-47 |
| Msa1354090 | Msa1378470 | 0.857440 | 1.630408e-62 | -8.615850e-47 |
| Msa1361190 | Msa1378470 | 0.849995 | 2.259868e-60 | -8.615850e-47 |
| Msa1375340 | Msa1378470 | 0.803076 | 4.141957e-49 | -8.615850e-47 |
| Msa1378460 | Msa1378470 | 0.911902 | 3.591921e-83 | -8.615850e-47 |
| Msa1378470 | Msa1381130 | 0.807868 | 4.095599e-50 | -8.615850e-47 |
| Msa1378470 | Msa1381210 | -0.807346 | 5.286436e-50 | -8.615850e-47 |
| Msa1378470 | Msa1382720 | 0.800870 | 1.176434e-48 | -8.615850e-47 |
| Msa1378470 | Msa1391490 | 0.828782 | 7.425677e-55 | -8.615850e-47 |
| Msa1378470 | Msa1394900 | 0.818811 | 1.612950e-52 | -8.615850e-47 |
| Msa1378470 | Msa1397970 | 0.841214 | 5.443997e-58 | -8.615850e-47 |
| Msa1378470 | Msa1398800 | 0.827605 | 1.426202e-54 | -8.615850e-47 |
| Msa1378470 | Msa1405770 | 0.817002 | 4.132787e-52 | -8.615850e-47 |
| Msa1378470 | Msa1418200 | 0.817583 | 3.058862e-52 | -8.615850e-47 |
| Msa1378470 | Msa1421870 | 0.873600 | 1.296615e-67 | -8.615850e-47 |
| Msa1378470 | Msa1422890 | 0.838411 | 2.922871e-57 | -8.615850e-47 |
| Msa1378470 | Msa1427830 | 0.834494 | 2.902166e-56 | -8.615850e-47 |
| Msa1378470 | Msa1428420 | 0.812672 | 3.768607e-51 | -8.615850e-47 |
| Msa1378470 | Msa1431730 | 0.841218 | 5.428362e-58 | -8.615850e-47 |
| Msa1378470 | Msa1434660 | 0.840100 | 1.065267e-57 | -8.615850e-47 |
| Msa1378470 | Msa1439120 | 0.854056 | 1.587329e-61 | -8.615850e-47 |
| Msa1378470 | Msa1440220 | 0.846021 | 2.821137e-59 | -8.615850e-47 |
| Msa1378470 | Msa1440610 | 0.826126 | 3.217927e-54 | -8.615850e-47 |
| Msa1378470 | Msa1442290 | 0.810501 | 1.116978e-50 | -8.615850e-47 |
| Msa1378470 | Msa1449740 | 0.801189 | 1.012662e-48 | -8.615850e-47 |
| Msa1378470 | Msa1449880 | 0.806961 | 6.378561e-50 | -8.615850e-47 |
| Msa1378470 | Msa1450020 | 0.828289 | 9.764724e-55 | -8.615850e-47 |
| Msa1378470 | Msa1450980 | 0.803703 | 3.071781e-49 | -8.615850e-47 |
| Msa1378470 | Msa1453620 | 0.835167 | 1.963890e-56 | -8.615850e-47 |
| Msa1378470 | Msa1454110 | 0.839498 | 1.528975e-57 | -8.615850e-47 |
| Msa1378470 | Msa1455660 | 0.854921 | 8.921163e-62 | -8.615850e-47 |
| Msa1378470 | Msa1458920 | 0.803815 | 2.911267e-49 | -8.615850e-47 |
| Msa1378470 | Msa1464560 | 0.804647 | 1.953586e-49 | -8.615850e-47 |
| Msa1378470 | Msa1466350 | 0.828504 | 8.667166e-55 | -8.615850e-47 |
| Msa0605250 | Msa1378470 | 0.802635 | 5.109403e-49 | -8.615850e-47 |
| Msa0605620 | Msa1378470 | 0.809204 | 2.124015e-50 | -8.615850e-47 |
| Msa0607280 | Msa1378470 | 0.817005 | 4.127024e-52 | -8.615850e-47 |
| Msa0609790 | Msa1378470 | 0.803411 | 3.530781e-49 | -8.615850e-47 |
| Msa0614230 | Msa1378470 | 0.812016 | 5.240465e-51 | -8.615850e-47 |
| Msa0617830 | Msa1378470 | 0.821820 | 3.295514e-53 | -8.615850e-47 |
| Msa0618520 | Msa1378470 | 0.836297 | 1.016129e-56 | -8.615850e-47 |
| Msa0620640 | Msa1378470 | 0.808796 | 2.597109e-50 | -8.615850e-47 |
| Msa0628100 | Msa1378470 | 0.867613 | 1.202486e-65 | -8.615850e-47 |
| Msa0638710 | Msa1378470 | 0.816761 | 4.680117e-52 | -8.615850e-47 |
| Msa0647000 | Msa1378470 | 0.804556 | 2.041498e-49 | -8.615850e-47 |
| Msa0649310 | Msa1378470 | 0.821571 | 3.762443e-53 | -8.615850e-47 |
| Msa0650650 | Msa1378470 | 0.838748 | 2.391191e-57 | -8.615850e-47 |
| Msa0650740 | Msa1378470 | 0.835167 | 1.963918e-56 | -8.615850e-47 |
| Msa0651400 | Msa1378470 | 0.833779 | 4.383779e-56 | -8.615850e-47 |
| Msa0656680 | Msa1378470 | 0.815891 | 7.327160e-52 | -8.615850e-47 |
| Msa0658650 | Msa1378470 | 0.807946 | 3.941566e-50 | -8.615850e-47 |
| Msa0659040 | Msa1378470 | 0.803853 | 2.859249e-49 | -8.615850e-47 |
| Msa0659890 | Msa1378470 | 0.805935 | 1.049819e-49 | -8.615850e-47 |
| Msa0660820 | Msa1378470 | 0.814468 | 1.517388e-51 | -8.615850e-47 |
| Msa0665790 | Msa1378470 | 0.853736 | 1.961758e-61 | -8.615850e-47 |
| Msa0665910 | Msa1378470 | -0.807944 | 3.946476e-50 | -8.615850e-47 |
| Msa0667970 | Msa1378470 | 0.817388 | 3.384870e-52 | -8.615850e-47 |
| Msa0672120 | Msa1378470 | 0.804315 | 2.291373e-49 | -8.615850e-47 |
| Msa0676100 | Msa1378470 | 0.925508 | 1.668060e-90 | -8.615850e-47 |
| Msa0703460 | Msa1378470 | 0.811983 | 5.329137e-51 | -8.615850e-47 |
| Msa0704220 | Msa1378470 | 0.826630 | 2.441083e-54 | -8.615850e-47 |
| Msa0705420 | Msa1378470 | 0.831085 | 2.039016e-55 | -8.615850e-47 |
| Msa0706600 | Msa1378470 | 0.820155 | 7.965842e-53 | -8.615850e-47 |
| Msa0714340 | Msa1378470 | 0.815975 | 7.019379e-52 | -8.615850e-47 |
| Msa0714380 | Msa1378470 | 0.810517 | 1.108310e-50 | -8.615850e-47 |
| Msa0714600 | Msa1378470 | 0.836297 | 1.016551e-56 | -8.615850e-47 |
| Msa0720270 | Msa1378470 | 0.810962 | 8.880244e-51 | -8.615850e-47 |
| Msa0724050 | Msa1378470 | 0.821212 | 4.553124e-53 | -8.615850e-47 |
| Msa0729550 | Msa1378470 | 0.803805 | 2.926107e-49 | -8.615850e-47 |
| Msa0733000 | Msa1378470 | 0.801040 | 1.086154e-48 | -8.615850e-47 |
| Msa0734240 | Msa1378470 | 0.805803 | 1.119186e-49 | -8.615850e-47 |
| Msa0734660 | Msa1378470 | 0.827982 | 1.157984e-54 | -8.615850e-47 |
| Msa0738870 | Msa1378470 | 0.818701 | 1.708324e-52 | -8.615850e-47 |
| Msa0738880 | Msa1378470 | 0.825037 | 5.830997e-54 | -8.615850e-47 |
| Msa0743640 | Msa1378470 | 0.828822 | 7.260615e-55 | -8.615850e-47 |
| Msa0743650 | Msa1378470 | 0.812912 | 3.338314e-51 | -8.615850e-47 |
| Msa0750380 | Msa1378470 | 0.832501 | 9.121272e-56 | -8.615850e-47 |
| Msa0755090 | Msa1378470 | 0.827998 | 1.147516e-54 | -8.615850e-47 |
| Msa0756310 | Msa1378470 | 0.805606 | 1.230785e-49 | -8.615850e-47 |
| Msa0760890 | Msa1378470 | 0.832980 | 6.932790e-56 | -8.615850e-47 |
| Msa0763880 | Msa1378470 | 0.825698 | 4.066812e-54 | -8.615850e-47 |
| Msa0763910 | Msa1378470 | 0.817632 | 2.981100e-52 | -8.615850e-47 |
| Msa0768490 | Msa1378470 | 0.807892 | 4.048577e-50 | -8.615850e-47 |
| Msa0769830 | Msa1378470 | 0.829114 | 6.168599e-55 | -8.615850e-47 |
| Msa0776220 | Msa1378470 | 0.855774 | 5.035109e-62 | -8.615850e-47 |
| Msa0783270 | Msa1378470 | 0.802122 | 6.517749e-49 | -8.615850e-47 |
| Msa0787720 | Msa1378470 | 0.823004 | 1.748938e-53 | -8.615850e-47 |
| Msa0789270 | Msa1378470 | 0.816909 | 4.335811e-52 | -8.615850e-47 |
| Msa0789280 | Msa1378470 | 0.818709 | 1.701069e-52 | -8.615850e-47 |
| Msa0789290 | Msa1378470 | 0.811825 | 5.768241e-51 | -8.615850e-47 |
| Msa0789300 | Msa1378470 | 0.812927 | 3.314436e-51 | -8.615850e-47 |
| Msa0790640 | Msa1378470 | 0.844369 | 7.892315e-59 | -8.615850e-47 |
| Msa0801360 | Msa1378470 | 0.828428 | 9.038844e-55 | -8.615850e-47 |
| Msa0802210 | Msa1378470 | 0.808450 | 3.078213e-50 | -8.615850e-47 |
| Msa0803130 | Msa1378470 | 0.804369 | 2.233330e-49 | -8.615850e-47 |
| Msa0804120 | Msa1378470 | 0.840161 | 1.027278e-57 | -8.615850e-47 |
| Msa0806720 | Msa1378470 | 0.841859 | 3.680257e-58 | -8.615850e-47 |
| Msa0806760 | Msa1378470 | 0.844636 | 6.686329e-59 | -8.615850e-47 |
| Msa0811510 | Msa1378470 | 0.804593 | 2.004951e-49 | -8.615850e-47 |
| Msa0813670 | Msa1378470 | 0.818931 | 1.515059e-52 | -8.615850e-47 |
| Msa0818440 | Msa1378470 | 0.829266 | 5.667539e-55 | -8.615850e-47 |
| Msa0818550 | Msa1378470 | 0.831537 | 1.577709e-55 | -8.615850e-47 |
| Msa0819320 | Msa1378470 | 0.813317 | 2.721108e-51 | -8.615850e-47 |
| Msa0819360 | Msa1378470 | 0.815126 | 1.084454e-51 | -8.615850e-47 |
| Msa0819370 | Msa1378470 | 0.824863 | 6.410911e-54 | -8.615850e-47 |
| Msa0822370 | Msa1378470 | 0.801737 | 7.817517e-49 | -8.615850e-47 |
| Msa0828570 | Msa1378470 | 0.865669 | 4.994878e-65 | -8.615850e-47 |
| Msa0830720 | Msa1378470 | 0.837173 | 6.075101e-57 | -8.615850e-47 |
| Msa0834460 | Msa1378470 | 0.827804 | 1.277943e-54 | -8.615850e-47 |
| Msa0839830 | Msa1378470 | 0.830111 | 3.528732e-55 | -8.615850e-47 |
| Msa0125440 | Msa1378470 | 0.818991 | 1.467792e-52 | -8.615850e-47 |
| Msa0127440 | Msa1378470 | 0.832811 | 7.637777e-56 | -8.615850e-47 |
| Msa0130800 | Msa1378470 | 0.804800 | 1.814968e-49 | -8.615850e-47 |
| Msa0132620 | Msa1378470 | 0.803635 | 3.172661e-49 | -8.615850e-47 |
| Msa0135980 | Msa1378470 | 0.817023 | 4.089006e-52 | -8.615850e-47 |
| Msa0136390 | Msa1378470 | 0.815372 | 9.564578e-52 | -8.615850e-47 |
| Msa0138390 | Msa1378470 | -0.818426 | 1.972332e-52 | -8.615850e-47 |
| Msa0140290 | Msa1378470 | 0.822907 | 1.842084e-53 | -8.615850e-47 |
| Msa0142420 | Msa1378470 | 0.826475 | 2.658262e-54 | -8.615850e-47 |
| Msa0146470 | Msa1378470 | 0.800647 | 1.306300e-48 | -8.615850e-47 |
| Msa0154180 | Msa1378470 | 0.806772 | 6.994241e-50 | -8.615850e-47 |
| Msa0154220 | Msa1378470 | 0.821318 | 4.302338e-53 | -8.615850e-47 |
| Msa0154240 | Msa1378470 | 0.830355 | 3.077363e-55 | -8.615850e-47 |
| Msa0154270 | Msa1378470 | 0.856463 | 3.164102e-62 | -8.615850e-47 |
| Msa0155610 | Msa1378470 | 0.896141 | 4.904969e-76 | -8.615850e-47 |
| Msa0159750 | Msa1378470 | 0.849412 | 3.287872e-60 | -8.615850e-47 |
| Msa0168100 | Msa1378470 | 0.804331 | 2.274223e-49 | -8.615850e-47 |
| Msa0169620 | Msa1378470 | 0.810122 | 1.348565e-50 | -8.615850e-47 |
| Msa0171920 | Msa1378470 | 0.800454 | 1.430753e-48 | -8.615850e-47 |
| Msa0173000 | Msa1378470 | 0.802743 | 4.853139e-49 | -8.615850e-47 |
| Msa0175530 | Msa1378470 | 0.815001 | 1.156165e-51 | -8.615850e-47 |
| Msa0178940 | Msa1378470 | 0.802931 | 4.439181e-49 | -8.615850e-47 |
| Msa0178990 | Msa1378470 | 0.813203 | 2.882115e-51 | -8.615850e-47 |
| Msa0182640 | Msa1378470 | 0.808469 | 3.049890e-50 | -8.615850e-47 |
| Msa0182930 | Msa1378470 | 0.870880 | 1.044379e-66 | -8.615850e-47 |
| Msa0183560 | Msa1378470 | 0.849904 | 2.395876e-60 | -8.615850e-47 |
| Msa0185390 | Msa1378470 | 0.809303 | 2.022675e-50 | -8.615850e-47 |
| Msa0193760 | Msa1378470 | 0.811854 | 5.685032e-51 | -8.615850e-47 |
| Msa0198440 | Msa1378470 | 0.834939 | 2.242392e-56 | -8.615850e-47 |
| Msa0200010 | Msa1378470 | 0.818764 | 1.653076e-52 | -8.615850e-47 |
| Msa0200840 | Msa1378470 | 0.803440 | 3.481878e-49 | -8.615850e-47 |
| Msa0200950 | Msa1378470 | -0.816309 | 5.910599e-52 | -8.615850e-47 |
| Msa0207000 | Msa1378470 | 0.808231 | 3.428061e-50 | -8.615850e-47 |
| Msa0212730 | Msa1378470 | 0.801579 | 8.424128e-49 | -8.615850e-47 |
| Msa0216210 | Msa1378470 | 0.854642 | 1.074149e-61 | -8.615850e-47 |
| Msa0218530 | Msa1378470 | -0.809330 | 1.995555e-50 | -8.615850e-47 |
| Msa0218650 | Msa1378470 | -0.837179 | 6.055061e-57 | -8.615850e-47 |
| Msa0222660 | Msa1378470 | 0.800189 | 1.619439e-48 | -8.615850e-47 |
| Msa1229640 | Msa1378470 | 0.828446 | 8.949984e-55 | -8.615850e-47 |
| Msa1232270 | Msa1378470 | 0.849373 | 3.371327e-60 | -8.615850e-47 |
| Msa1238730 | Msa1378470 | 0.825274 | 5.125460e-54 | -8.615850e-47 |
| Msa1241820 | Msa1378470 | 0.863301 | 2.745469e-64 | -8.615850e-47 |
| Msa1245120 | Msa1378470 | -0.804884 | 1.743225e-49 | -8.615850e-47 |
| Msa1252070 | Msa1378470 | 0.810150 | 1.329900e-50 | -8.615850e-47 |
| Msa1260130 | Msa1378470 | 0.815001 | 1.156165e-51 | -8.615850e-47 |
| Msa1262310 | Msa1378470 | 0.804434 | 2.164436e-49 | -8.615850e-47 |
| Msa1270770 | Msa1378470 | 0.800318 | 1.524404e-48 | -8.615850e-47 |
| Msa1272950 | Msa1378470 | 0.805889 | 1.073458e-49 | -8.615850e-47 |
| Msa1281270 | Msa1378470 | 0.829828 | 4.138262e-55 | -8.615850e-47 |
| Msa1282920 | Msa1378470 | 0.856074 | 4.112455e-62 | -8.615850e-47 |
| Msa1292730 | Msa1378470 | 0.811471 | 6.885915e-51 | -8.615850e-47 |
| Msa1293050 | Msa1378470 | 0.831476 | 1.633949e-55 | -8.615850e-47 |
| Msa1306190 | Msa1378470 | 0.866257 | 3.255087e-65 | -8.615850e-47 |
| Msa1306200 | Msa1378470 | 0.865930 | 4.131385e-65 | -8.615850e-47 |
| Msa1317030 | Msa1378470 | 0.871008 | 9.479906e-67 | -8.615850e-47 |
| Msa1320380 | Msa1378470 | 0.851686 | 7.551997e-61 | -8.615850e-47 |
| Msa1326400 | Msa1378470 | 0.835182 | 1.947100e-56 | -8.615850e-47 |
| Msa1335970 | Msa1378470 | -0.807197 | 5.684563e-50 | -8.615850e-47 |
| Msa0366870 | Msa1378470 | 0.817826 | 2.695389e-52 | -8.615850e-47 |
| Msa0371070 | Msa1378470 | 0.812804 | 3.526395e-51 | -8.615850e-47 |
| Msa0377280 | Msa1378470 | 0.860041 | 2.722456e-63 | -8.615850e-47 |
| Msa0380040 | Msa1378470 | 0.800647 | 1.306540e-48 | -8.615850e-47 |
| Msa0380650 | Msa1378470 | 0.822683 | 2.077720e-53 | -8.615850e-47 |
| Msa0382590 | Msa1378470 | 0.854076 | 1.566226e-61 | -8.615850e-47 |
| Msa0389060 | Msa1378470 | 0.814847 | 1.250499e-51 | -8.615850e-47 |
| Msa0392050 | Msa1378470 | 0.842315 | 2.787493e-58 | -8.615850e-47 |
| Msa0401340 | Msa1378470 | 0.886692 | 2.740786e-72 | -8.615850e-47 |
| Msa0404690 | Msa1378470 | 0.846605 | 1.955478e-59 | -8.615850e-47 |
| Msa0411560 | Msa1378470 | 0.806880 | 6.633636e-50 | -8.615850e-47 |
| Msa0412190 | Msa1378470 | 0.815372 | 9.564578e-52 | -8.615850e-47 |
| Msa0413180 | Msa1378470 | 0.801915 | 7.187437e-49 | -8.615850e-47 |
| Msa0414780 | Msa1378470 | 0.808082 | 3.687719e-50 | -8.615850e-47 |
| Msa0418430 | Msa1378470 | 0.878580 | 2.502933e-69 | -8.615850e-47 |
| Msa0430290 | Msa1378470 | 0.819665 | 1.030878e-52 | -8.615850e-47 |
| Msa0431520 | Msa1378470 | 0.848319 | 6.610741e-60 | -8.615850e-47 |
| Msa0431830 | Msa1378470 | 0.845037 | 5.212137e-59 | -8.615850e-47 |
| Msa0432720 | Msa1378470 | 0.852259 | 5.190359e-61 | -8.615850e-47 |
| Msa0448080 | Msa1378470 | 0.880584 | 4.867763e-70 | -8.615850e-47 |
| Msa0448120 | Msa1378470 | 0.884707 | 1.523643e-71 | -8.615850e-47 |
| Msa0462590 | Msa1378470 | 0.881842 | 1.714514e-70 | -8.615850e-47 |
| Msa0465800 | Msa1378470 | 0.889532 | 2.226436e-73 | -8.615850e-47 |
| Msa0467800 | Msa1378470 | 0.801282 | 9.692742e-49 | -8.615850e-47 |
| Msa0469950 | Msa1378470 | 0.842071 | 3.233618e-58 | -8.615850e-47 |
| Msa0469970 | Msa1378470 | 0.816069 | 6.688272e-52 | -8.615850e-47 |
| Msa0472740 | Msa1378470 | 0.900194 | 9.345300e-78 | -8.615850e-47 |
| Msa0473530 | Msa1378470 | 0.804961 | 1.680375e-49 | -8.615850e-47 |
| Msa0475580 | Msa1378470 | 0.802127 | 6.500305e-49 | -8.615850e-47 |
| Msa0481490 | Msa1378470 | 0.832671 | 8.274798e-56 | -8.615850e-47 |
| Msa0984000 | Msa1378470 | 0.834529 | 2.843423e-56 | -8.615850e-47 |
| Msa1004210 | Msa1378470 | 0.873414 | 1.498469e-67 | -8.615850e-47 |
| Msa1004260 | Msa1378470 | 0.816382 | 5.692168e-52 | -8.615850e-47 |
| Msa1014350 | Msa1378470 | 0.814970 | 1.174397e-51 | -8.615850e-47 |
| Msa1030870 | Msa1378470 | 0.825717 | 4.026474e-54 | -8.615850e-47 |
| Msa1038320 | Msa1378470 | 0.829909 | 3.952699e-55 | -8.615850e-47 |
| Msa1046610 | Msa1378470 | 0.863799 | 1.923788e-64 | -8.615850e-47 |
| Msa1055360 | Msa1378470 | 0.825514 | 4.496551e-54 | -8.615850e-47 |
| Msa1058010 | Msa1378470 | 0.826584 | 2.504523e-54 | -8.615850e-47 |
| Msa1063920 | Msa1378470 | 0.813284 | 2.766400e-51 | -8.615850e-47 |
| Msa1072340 | Msa1378470 | 0.817179 | 3.771036e-52 | -8.615850e-47 |
| Msa1082820 | Msa1378470 | -0.829813 | 4.172795e-55 | -8.615850e-47 |
| Msa1087240 | Msa1378470 | 0.809361 | 1.965878e-50 | -8.615850e-47 |
| Msa1093390 | Msa1378470 | 0.812266 | 4.622968e-51 | -8.615850e-47 |
| Msa1098180 | Msa1378470 | -0.818866 | 1.567351e-52 | -8.615850e-47 |
| Msa1102540 | Msa1378470 | 0.831431 | 1.676275e-55 | -8.615850e-47 |
| Msa0240450 | Msa1378470 | -0.812471 | 4.169643e-51 | -8.615850e-47 |
| Msa0240780 | Msa1378470 | 0.824873 | 6.376373e-54 | -8.615850e-47 |
| Msa0242260 | Msa1378470 | -0.812946 | 3.281807e-51 | -8.615850e-47 |
| Msa0242290 | Msa1378470 | 0.813206 | 2.877681e-51 | -8.615850e-47 |
| Msa0243470 | Msa1378470 | 0.808219 | 3.449257e-50 | -8.615850e-47 |
| Msa0244270 | Msa1378470 | 0.832261 | 1.045680e-55 | -8.615850e-47 |
| Msa0252180 | Msa1378470 | 0.808687 | 2.739787e-50 | -8.615850e-47 |
| Msa0253160 | Msa1378470 | 0.805610 | 1.228458e-49 | -8.615850e-47 |
| Msa0258670 | Msa1378470 | -0.813913 | 2.011443e-51 | -8.615850e-47 |
| Msa0260180 | Msa1378470 | 0.808876 | 2.496461e-50 | -8.615850e-47 |
| Msa0260190 | Msa1378470 | 0.863026 | 3.339015e-64 | -8.615850e-47 |
| Msa0261970 | Msa1378470 | 0.801954 | 7.057197e-49 | -8.615850e-47 |
| Msa0264050 | Msa1378470 | 0.813487 | 2.496592e-51 | -8.615850e-47 |
| Msa0265210 | Msa1378470 | 0.806675 | 7.331404e-50 | -8.615850e-47 |
| Msa0265580 | Msa1378470 | 0.864823 | 9.215330e-65 | -8.615850e-47 |
| Msa0275030 | Msa1378470 | 0.806453 | 8.165512e-50 | -8.615850e-47 |
| Msa0278670 | Msa1378470 | 0.829748 | 4.328318e-55 | -8.615850e-47 |
| Msa0280490 | Msa1378470 | 0.801328 | 9.484095e-49 | -8.615850e-47 |
| Msa0280730 | Msa1378470 | 0.815787 | 7.730939e-52 | -8.615850e-47 |
| Msa0281940 | Msa1378470 | 0.822322 | 2.519760e-53 | -8.615850e-47 |
| Msa0282170 | Msa1378470 | 0.840323 | 9.320487e-58 | -8.615850e-47 |
| Msa0284780 | Msa1378470 | 0.806789 | 6.937244e-50 | -8.615850e-47 |
| Msa0284870 | Msa1378470 | 0.805314 | 1.417202e-49 | -8.615850e-47 |
| Msa0288240 | Msa1378470 | 0.834107 | 3.627555e-56 | -8.615850e-47 |
| Msa0288330 | Msa1378470 | 0.817538 | 3.130135e-52 | -8.615850e-47 |
| Msa0295570 | Msa1378470 | 0.821688 | 3.534650e-53 | -8.615850e-47 |
| Msa0298830 | Msa1378470 | 0.806336 | 8.643128e-50 | -8.615850e-47 |
| Msa0299790 | Msa1378470 | 0.833417 | 5.396149e-56 | -8.615850e-47 |
| Msa0301980 | Msa1378470 | 0.808263 | 3.374889e-50 | -8.615850e-47 |
| Msa0303440 | Msa1378470 | 0.858600 | 7.370169e-63 | -8.615850e-47 |
| Msa0303500 | Msa1378470 | 0.841039 | 6.050365e-58 | -8.615850e-47 |
| Msa0309650 | Msa1378470 | -0.854597 | 1.107491e-61 | -8.615850e-47 |
| Msa0318070 | Msa1378470 | 0.839223 | 1.801542e-57 | -8.615850e-47 |
| Msa0318250 | Msa1378470 | 0.824431 | 8.104242e-54 | -8.615850e-47 |
| Msa0318270 | Msa1378470 | 0.844672 | 6.540154e-59 | -8.615850e-47 |
| Msa0318310 | Msa1378470 | 0.844148 | 9.043314e-59 | -8.615850e-47 |
| Msa0326670 | Msa1378470 | 0.825452 | 4.652854e-54 | -8.615850e-47 |
| Msa0344680 | Msa1378470 | 0.843053 | 1.774949e-58 | -8.615850e-47 |
| Msa0354390 | Msa1378470 | 0.872394 | 3.288943e-67 | -8.615850e-47 |
| Msa0357380 | Msa1378470 | 0.846977 | 1.547301e-59 | -8.615850e-47 |
| Msa0357390 | Msa1378470 | 0.851469 | 8.694996e-61 | -8.615850e-47 |
| Msa0358290 | Msa1378470 | 0.860190 | 2.454380e-63 | -8.615850e-47 |
| Msa1108140 | Msa1378470 | 0.804060 | 2.589804e-49 | -8.615850e-47 |
| Msa1111630 | Msa1378470 | 0.817656 | 2.944951e-52 | -8.615850e-47 |
| Msa1118140 | Msa1378470 | 0.810624 | 1.050538e-50 | -8.615850e-47 |
| Msa1118150 | Msa1378470 | 0.809536 | 1.802422e-50 | -8.615850e-47 |
| Msa1119250 | Msa1378470 | -0.801237 | 9.898786e-49 | -8.615850e-47 |
| Msa1119300 | Msa1378470 | -0.808474 | 3.042781e-50 | -8.615850e-47 |
| Msa1134560 | Msa1378470 | 0.805384 | 1.369836e-49 | -8.615850e-47 |
| Msa1140010 | Msa1378470 | 0.811534 | 6.671397e-51 | -8.615850e-47 |
| Msa1144700 | Msa1378470 | 0.808564 | 2.911011e-50 | -8.615850e-47 |
| Msa1144730 | Msa1378470 | 0.843338 | 1.490132e-58 | -8.615850e-47 |
| Msa1149750 | Msa1378470 | 0.803338 | 3.655465e-49 | -8.615850e-47 |
| Msa1150230 | Msa1378470 | 0.808276 | 3.353042e-50 | -8.615850e-47 |
| Msa1157730 | Msa1378470 | 0.857477 | 1.589043e-62 | -8.615850e-47 |
| Msa1159360 | Msa1378470 | 0.807446 | 5.035026e-50 | -8.615850e-47 |
| Msa1177240 | Msa1378470 | 0.870467 | 1.427401e-66 | -8.615850e-47 |
| Msa1182830 | Msa1378470 | 0.834845 | 2.367417e-56 | -8.615850e-47 |
| Msa1187520 | Msa1378470 | 0.860628 | 1.809535e-63 | -8.615850e-47 |
| Msa1198450 | Msa1378470 | 0.836063 | 1.165449e-56 | -8.615850e-47 |
| Msa1212760 | Msa1378470 | 0.826816 | 2.204455e-54 | -8.615850e-47 |
| Msa1222030 | Msa1378470 | -0.831106 | 2.013924e-55 | -8.615850e-47 |
| Msa1223160 | Msa1378470 | -0.808371 | 3.200894e-50 | -8.615850e-47 |
| Msa0487490 | Msa1378470 | 0.811689 | 6.175666e-51 | -8.615850e-47 |
| Msa0511720 | Msa1378470 | -0.802676 | 5.011739e-49 | -8.615850e-47 |
| Msa0519220 | Msa1378470 | 0.803306 | 3.712453e-49 | -8.615850e-47 |
| Msa0520220 | Msa1378470 | 0.823642 | 1.240793e-53 | -8.615850e-47 |
| Msa0525270 | Msa1378470 | 0.849730 | 2.681294e-60 | -8.615850e-47 |
| Msa0525280 | Msa1378470 | 0.845358 | 4.269198e-59 | -8.615850e-47 |
| Msa0530950 | Msa1378470 | 0.882967 | 6.679466e-71 | -8.615850e-47 |
| Msa0532840 | Msa1378470 | 0.804199 | 2.422117e-49 | -8.615850e-47 |
| Msa0533010 | Msa1378470 | 0.802965 | 4.366608e-49 | -8.615850e-47 |
| Msa0538260 | Msa1378470 | 0.817558 | 3.099329e-52 | -8.615850e-47 |
| Msa0546740 | Msa1378470 | 0.811231 | 7.765884e-51 | -8.615850e-47 |
| Msa0549540 | Msa1378470 | 0.801950 | 7.067747e-49 | -8.615850e-47 |
| Msa0549760 | Msa1378470 | 0.815427 | 9.298417e-52 | -8.615850e-47 |
| Msa0561510 | Msa1378470 | 0.802527 | 5.377974e-49 | -8.615850e-47 |
| Msa0568610 | Msa1378470 | 0.834639 | 2.667694e-56 | -8.615850e-47 |
| Msa0576600 | Msa1378470 | 0.822576 | 2.199929e-53 | -8.615850e-47 |
| Msa0577230 | Msa1378470 | 0.835885 | 1.292796e-56 | -8.615850e-47 |
| Msa0578070 | Msa1378470 | -0.830082 | 3.588229e-55 | -8.615850e-47 |
| Msa0579340 | Msa1378470 | 0.846203 | 2.516600e-59 | -8.615850e-47 |
| Msa0583740 | Msa1378470 | 0.869067 | 4.087248e-66 | -8.615850e-47 |
| Msa0583790 | Msa1378470 | 0.810018 | 1.420240e-50 | -8.615850e-47 |
| Msa0584280 | Msa1378470 | 0.833294 | 5.793209e-56 | -8.615850e-47 |
| Msa0593810 | Msa1378470 | 0.847488 | 1.120749e-59 | -8.615850e-47 |
| Msa0600820 | Msa1378470 | 0.813007 | 3.182026e-51 | -8.615850e-47 |
| Msa0847200 | Msa1378470 | 0.804358 | 2.244828e-49 | -8.615850e-47 |
| Msa0848380 | Msa1378470 | 0.807537 | 4.815122e-50 | -8.615850e-47 |
| Msa0848760 | Msa1378470 | 0.825414 | 4.748269e-54 | -8.615850e-47 |
| Msa0851740 | Msa1378470 | 0.809803 | 1.579905e-50 | -8.615850e-47 |
| Msa0854120 | Msa1378470 | 0.817163 | 3.801935e-52 | -8.615850e-47 |
| Msa0859520 | Msa1378470 | 0.811120 | 8.207815e-51 | -8.615850e-47 |
| Msa0863760 | Msa1378470 | 0.820759 | 5.788132e-53 | -8.615850e-47 |
| Msa0863770 | Msa1378470 | 0.815630 | 8.376489e-52 | -8.615850e-47 |
| Msa0878980 | Msa1378470 | -0.814030 | 1.896220e-51 | -8.615850e-47 |
| Msa0880220 | Msa1378470 | 0.803208 | 3.889817e-49 | -8.615850e-47 |
| Msa0882700 | Msa1378470 | 0.806073 | 9.816992e-50 | -8.615850e-47 |
| Msa0893360 | Msa1378470 | 0.821181 | 4.628118e-53 | -8.615850e-47 |
| Msa0899700 | Msa1378470 | 0.835840 | 1.327443e-56 | -8.615850e-47 |
| Msa0903730 | Msa1378470 | 0.811003 | 8.698280e-51 | -8.615850e-47 |
| Msa0934830 | Msa1378470 | 0.804844 | 1.777498e-49 | -8.615850e-47 |
| Msa0944690 | Msa1378470 | 0.804825 | 1.793198e-49 | -8.615850e-47 |
| Msa0945960 | Msa1378470 | 0.840827 | 6.876555e-58 | -8.615850e-47 |
| Msa0950320 | Msa1378470 | 0.800902 | 1.159092e-48 | -8.615850e-47 |
| Msa0950620 | Msa1378470 | 0.820572 | 6.389729e-53 | -8.615850e-47 |
| Msa0958020 | Msa1378470 | 0.804944 | 1.693771e-49 | -8.615850e-47 |
| Msa0964680 | Msa1378470 | 0.841928 | 3.527650e-58 | -8.615850e-47 |
| Msa0968780 | Msa1378470 | 0.805447 | 1.329191e-49 | -8.615850e-47 |
| Msa0971860 | Msa1378470 | 0.837821 | 4.144782e-57 | -8.615850e-47 |
| Msa0973230 | Msa1378470 | 0.804489 | 2.108014e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378470 | MtrunA17_Chr4g0019521 | 77.027 | 74 | 16 | 1 | 9 | 81 | 43 | 116 | 4.96e-35 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 8 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCACAACAAAAGGGTGAT+TGG | 0.404912 | tig0020061:+54948 | Msa1378470:CDS |
| AATAAGCACATACTAACTTC+TGG | 0.421785 | tig0020061:-55021 | None:intergenic |
| GAATTTAAGTCCACAACAAA+AGG | 0.428735 | tig0020061:+54940 | Msa1378470:CDS |
| ATAAGCACATACTAACTTCT+GGG | 0.459372 | tig0020061:-55020 | None:intergenic |
| AAATTCTTCATCTCTTGTTG+TGG | 0.464351 | tig0020061:-54923 | None:intergenic |
| TTGAGAAGCTAATTGGGAAG+AGG | 0.524139 | tig0020061:+54900 | Msa1378470:CDS |
| AATTTAAGTCCACAACAAAA+GGG | 0.599106 | tig0020061:+54941 | Msa1378470:CDS |
| TACTGAGAAAATCTTTAGAG+TGG | 0.610701 | tig0020061:+55721 | Msa1378470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATAAATAATTATGTTTTT+GGG | - | tig0020061:55416-55435 | None:intergenic | 10.0% |
| !!! | AGAATAAATAATTATGTTTT+TGG | - | tig0020061:55417-55436 | None:intergenic | 10.0% |
| !! | GAAAAAAATAAAATATGTTA+TGG | + | tig0020061:55491-55510 | Msa1378470:intron | 10.0% |
| !!! | TTATTTTTAGATTAATGTTT+AGG | + | tig0020061:55588-55607 | Msa1378470:intron | 10.0% |
| !!! | GAATAAATAATTATGTTTTT+GGG | - | tig0020061:55416-55435 | None:intergenic | 10.0% |
| !!! | AGAATAAATAATTATGTTTT+TGG | - | tig0020061:55417-55436 | None:intergenic | 10.0% |
| !! | GAAAAAAATAAAATATGTTA+TGG | + | tig0020061:55491-55510 | Msa1378470:intron | 10.0% |
| !!! | TTATTTTTAGATTAATGTTT+AGG | + | tig0020061:55588-55607 | Msa1378470:intron | 10.0% |
| !! | AAATATACATTTAACATCAA+GGG | - | tig0020061:54825-54844 | None:intergenic | 15.0% |
| !! | AAAATATACATTTAACATCA+AGG | - | tig0020061:54826-54845 | None:intergenic | 15.0% |
| !!! | TATATTTTCCTAACTTAAAA+AGG | - | tig0020061:55158-55177 | None:intergenic | 15.0% |
| !! | AAATATACATTTAACATCAA+GGG | - | tig0020061:54825-54844 | None:intergenic | 15.0% |
| !! | AAAATATACATTTAACATCA+AGG | - | tig0020061:54826-54845 | None:intergenic | 15.0% |
| !!! | TATATTTTCCTAACTTAAAA+AGG | - | tig0020061:55158-55177 | None:intergenic | 15.0% |
| !! | AATATACATTTAACATCAAG+GGG | - | tig0020061:54824-54843 | None:intergenic | 20.0% |
| !!! | AAATGTATATTTTGTAGTAG+TGG | + | tig0020061:54833-54852 | Msa1378470:intron | 20.0% |
| !! | GAAAATAAATTTGTAAACAC+TGG | + | tig0020061:55132-55151 | Msa1378470:intron | 20.0% |
| !! | AATCTAAAAATAACAGAGAA+TGG | - | tig0020061:55581-55600 | None:intergenic | 20.0% |
| !!! | TTTGAAATCAAATTCATGAA+CGG | + | tig0020061:55640-55659 | Msa1378470:intron | 20.0% |
| !! | AATATACATTTAACATCAAG+GGG | - | tig0020061:54824-54843 | None:intergenic | 20.0% |
| !!! | AAATGTATATTTTGTAGTAG+TGG | + | tig0020061:54833-54852 | Msa1378470:intron | 20.0% |
| !! | GAAAATAAATTTGTAAACAC+TGG | + | tig0020061:55132-55151 | Msa1378470:intron | 20.0% |
| !! | AATCTAAAAATAACAGAGAA+TGG | - | tig0020061:55581-55600 | None:intergenic | 20.0% |
| !!! | TTTGAAATCAAATTCATGAA+CGG | + | tig0020061:55640-55659 | Msa1378470:intron | 20.0% |
| !!! | TTTTAATTTTCACATCAGTG+CGG | - | tig0020061:54800-54819 | None:intergenic | 25.0% |
| !!! | AATGATTTTGAGAAGCTAAT+TGG | + | tig0020061:54893-54912 | Msa1378470:CDS | 25.0% |
| !!! | ATGATTTTGAGAAGCTAATT+GGG | + | tig0020061:54894-54913 | Msa1378470:CDS | 25.0% |
| ! | AATTTAAGTCCACAACAAAA+GGG | + | tig0020061:54941-54960 | Msa1378470:CDS | 25.0% |
| ! | GATCTATAAAAGAATTATCG+TGG | + | tig0020061:55180-55199 | Msa1378470:intron | 25.0% |
| ! | AGGATACAGAGAAATATAAA+GGG | - | tig0020061:55441-55460 | None:intergenic | 25.0% |
| ! | TAGGATACAGAGAAATATAA+AGG | - | tig0020061:55442-55461 | None:intergenic | 25.0% |
| !! | TCTAAAGATTTTCTCAGTAT+TGG | - | tig0020061:55720-55739 | None:intergenic | 25.0% |
| !!! | TTTTAATTTTCACATCAGTG+CGG | - | tig0020061:54800-54819 | None:intergenic | 25.0% |
| !!! | AATGATTTTGAGAAGCTAAT+TGG | + | tig0020061:54893-54912 | Msa1378470:CDS | 25.0% |
| !!! | ATGATTTTGAGAAGCTAATT+GGG | + | tig0020061:54894-54913 | Msa1378470:CDS | 25.0% |
| ! | AATTTAAGTCCACAACAAAA+GGG | + | tig0020061:54941-54960 | Msa1378470:CDS | 25.0% |
| ! | GATCTATAAAAGAATTATCG+TGG | + | tig0020061:55180-55199 | Msa1378470:intron | 25.0% |
| ! | AGGATACAGAGAAATATAAA+GGG | - | tig0020061:55441-55460 | None:intergenic | 25.0% |
| ! | TAGGATACAGAGAAATATAA+AGG | - | tig0020061:55442-55461 | None:intergenic | 25.0% |
| !! | TCTAAAGATTTTCTCAGTAT+TGG | - | tig0020061:55720-55739 | None:intergenic | 25.0% |
| AAATTCTTCATCTCTTGTTG+TGG | - | tig0020061:54926-54945 | None:intergenic | 30.0% | |
| GAATTTAAGTCCACAACAAA+AGG | + | tig0020061:54940-54959 | Msa1378470:CDS | 30.0% | |
| ATAAGCACATACTAACTTCT+GGG | - | tig0020061:55023-55042 | None:intergenic | 30.0% | |
| AATAAGCACATACTAACTTC+TGG | - | tig0020061:55024-55043 | None:intergenic | 30.0% | |
| AACTACCATACATGTACATT+AGG | - | tig0020061:55064-55083 | None:intergenic | 30.0% | |
| !! | ATGATAAGCTTGTTGGAATA+CGG | + | tig0020061:55330-55349 | Msa1378470:intron | 30.0% |
| AACTCTCATATCCATATTCA+TGG | + | tig0020061:55386-55405 | Msa1378470:intron | 30.0% | |
| ! | AAATTCATGAACGGTTTTCA+AGG | + | tig0020061:55649-55668 | Msa1378470:intron | 30.0% |
| !! | GATTTTCTCAGTATTGGATT+GGG | - | tig0020061:55714-55733 | None:intergenic | 30.0% |
| !! | AGATTTTCTCAGTATTGGAT+TGG | - | tig0020061:55715-55734 | None:intergenic | 30.0% |
| ! | TACTGAGAAAATCTTTAGAG+TGG | + | tig0020061:55721-55740 | Msa1378470:CDS | 30.0% |
| AAATTCTTCATCTCTTGTTG+TGG | - | tig0020061:54926-54945 | None:intergenic | 30.0% | |
| GAATTTAAGTCCACAACAAA+AGG | + | tig0020061:54940-54959 | Msa1378470:CDS | 30.0% | |
| ATAAGCACATACTAACTTCT+GGG | - | tig0020061:55023-55042 | None:intergenic | 30.0% | |
| AATAAGCACATACTAACTTC+TGG | - | tig0020061:55024-55043 | None:intergenic | 30.0% | |
| AACTACCATACATGTACATT+AGG | - | tig0020061:55064-55083 | None:intergenic | 30.0% | |
| !! | ATGATAAGCTTGTTGGAATA+CGG | + | tig0020061:55330-55349 | Msa1378470:intron | 30.0% |
| AACTCTCATATCCATATTCA+TGG | + | tig0020061:55386-55405 | Msa1378470:intron | 30.0% | |
| ! | AAATTCATGAACGGTTTTCA+AGG | + | tig0020061:55649-55668 | Msa1378470:intron | 30.0% |
| !! | GATTTTCTCAGTATTGGATT+GGG | - | tig0020061:55714-55733 | None:intergenic | 30.0% |
| !! | AGATTTTCTCAGTATTGGAT+TGG | - | tig0020061:55715-55734 | None:intergenic | 30.0% |
| ! | TACTGAGAAAATCTTTAGAG+TGG | + | tig0020061:55721-55740 | Msa1378470:CDS | 30.0% |
| TAGTATGTGCTTATTGTGCT+TGG | + | tig0020061:55029-55048 | Msa1378470:intron | 35.0% | |
| CTATGCCTAATGTACATGTA+TGG | + | tig0020061:55056-55075 | Msa1378470:intron | 35.0% | |
| !!! | AACACTGGCCTTTTTAAGTT+AGG | + | tig0020061:55147-55166 | Msa1378470:intron | 35.0% |
| ! | GCGTTGATGAAATATATGAG+TGG | + | tig0020061:55242-55261 | Msa1378470:intron | 35.0% |
| TGTTGTTCCTAAACTTGCAT+AGG | - | tig0020061:55311-55330 | None:intergenic | 35.0% | |
| GAACAACATGATAAGCTTGT+TGG | + | tig0020061:55323-55342 | Msa1378470:intron | 35.0% | |
| !!! | TTTTGGGATCACCATGAATA+TGG | - | tig0020061:55400-55419 | None:intergenic | 35.0% |
| AAGGGGTGAAAAATTAGAGT+AGG | - | tig0020061:55461-55480 | None:intergenic | 35.0% | |
| ! | TACTCTAATTTTTCACCCCT+TGG | + | tig0020061:55460-55479 | Msa1378470:intron | 35.0% |
| ! | ACTCTAATTTTTCACCCCTT+GGG | + | tig0020061:55461-55480 | Msa1378470:intron | 35.0% |
| !!! | TTTTTTTCCAAACCACCCAA+GGG | - | tig0020061:55479-55498 | None:intergenic | 35.0% |
| !!! | ATTTTTTTCCAAACCACCCA+AGG | - | tig0020061:55480-55499 | None:intergenic | 35.0% |
| TAACAGAGAATGGTCAAAGA+TGG | - | tig0020061:55571-55590 | None:intergenic | 35.0% | |
| TAGTATGTGCTTATTGTGCT+TGG | + | tig0020061:55029-55048 | Msa1378470:intron | 35.0% | |
| CTATGCCTAATGTACATGTA+TGG | + | tig0020061:55056-55075 | Msa1378470:intron | 35.0% | |
| !!! | AACACTGGCCTTTTTAAGTT+AGG | + | tig0020061:55147-55166 | Msa1378470:intron | 35.0% |
| ! | GCGTTGATGAAATATATGAG+TGG | + | tig0020061:55242-55261 | Msa1378470:intron | 35.0% |
| TGTTGTTCCTAAACTTGCAT+AGG | - | tig0020061:55311-55330 | None:intergenic | 35.0% | |
| GAACAACATGATAAGCTTGT+TGG | + | tig0020061:55323-55342 | Msa1378470:intron | 35.0% | |
| !!! | TTTTGGGATCACCATGAATA+TGG | - | tig0020061:55400-55419 | None:intergenic | 35.0% |
| AAGGGGTGAAAAATTAGAGT+AGG | - | tig0020061:55461-55480 | None:intergenic | 35.0% | |
| ! | TACTCTAATTTTTCACCCCT+TGG | + | tig0020061:55460-55479 | Msa1378470:intron | 35.0% |
| ! | ACTCTAATTTTTCACCCCTT+GGG | + | tig0020061:55461-55480 | Msa1378470:intron | 35.0% |
| !!! | TTTTTTTCCAAACCACCCAA+GGG | - | tig0020061:55479-55498 | None:intergenic | 35.0% |
| !!! | ATTTTTTTCCAAACCACCCA+AGG | - | tig0020061:55480-55499 | None:intergenic | 35.0% |
| TAACAGAGAATGGTCAAAGA+TGG | - | tig0020061:55571-55590 | None:intergenic | 35.0% | |
| TTGAGAAGCTAATTGGGAAG+AGG | + | tig0020061:54900-54919 | Msa1378470:CDS | 40.0% | |
| ! | TTCCAATCACCCTTTTGTTG+TGG | - | tig0020061:54953-54972 | None:intergenic | 40.0% |
| ACAGACACCTATGCAAGTTT+AGG | + | tig0020061:55301-55320 | Msa1378470:intron | 40.0% | |
| !!! | TTTTTTCCAAACCACCCAAG+GGG | - | tig0020061:55478-55497 | None:intergenic | 40.0% |
| TATGCCAATGTCTATGATGC+AGG | + | tig0020061:55527-55546 | Msa1378470:intron | 40.0% | |
| AATGCCTGCATCATAGACAT+TGG | - | tig0020061:55534-55553 | None:intergenic | 40.0% | |
| ! | GGTCAAAGATGGACTTTCAA+AGG | - | tig0020061:55560-55579 | None:intergenic | 40.0% |
| TTGAGAAGCTAATTGGGAAG+AGG | + | tig0020061:54900-54919 | Msa1378470:CDS | 40.0% | |
| ! | TTCCAATCACCCTTTTGTTG+TGG | - | tig0020061:54953-54972 | None:intergenic | 40.0% |
| ACAGACACCTATGCAAGTTT+AGG | + | tig0020061:55301-55320 | Msa1378470:intron | 40.0% | |
| !!! | TTTTTTCCAAACCACCCAAG+GGG | - | tig0020061:55478-55497 | None:intergenic | 40.0% |
| TATGCCAATGTCTATGATGC+AGG | + | tig0020061:55527-55546 | Msa1378470:intron | 40.0% | |
| AATGCCTGCATCATAGACAT+TGG | - | tig0020061:55534-55553 | None:intergenic | 40.0% | |
| ! | GGTCAAAGATGGACTTTCAA+AGG | - | tig0020061:55560-55579 | None:intergenic | 40.0% |
| TCAGTGCGGTAAATACCTGA+AGG | - | tig0020061:54786-54805 | None:intergenic | 45.0% | |
| GTCCACAACAAAAGGGTGAT+TGG | + | tig0020061:54948-54967 | Msa1378470:CDS | 45.0% | |
| ! | CTAATTTTTCACCCCTTGGG+TGG | + | tig0020061:55464-55483 | Msa1378470:intron | 45.0% |
| TCAGTGCGGTAAATACCTGA+AGG | - | tig0020061:54786-54805 | None:intergenic | 45.0% | |
| GTCCACAACAAAAGGGTGAT+TGG | + | tig0020061:54948-54967 | Msa1378470:CDS | 45.0% | |
| ! | CTAATTTTTCACCCCTTGGG+TGG | + | tig0020061:55464-55483 | Msa1378470:intron | 45.0% |
| !!! | TTTTTTATGATAAATTTTTT+AGG | + | tig0020061:55673-55692 | Msa1378470:intron | 5.0% |
| !!! | TTTTTTATGATAAATTTTTT+AGG | + | tig0020061:55673-55692 | Msa1378470:intron | 5.0% |
| ! | TTTTCACCCCTTGGGTGGTT+TGG | + | tig0020061:55469-55488 | Msa1378470:intron | 50.0% |
| ! | TTTTCACCCCTTGGGTGGTT+TGG | + | tig0020061:55469-55488 | Msa1378470:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020061 | gene | 54770 | 55751 | 54770 | ID=Msa1378470;Name=Msa1378470 |
| tig0020061 | mRNA | 54770 | 55751 | 54770 | ID=Msa1378470-mRNA-1;Parent=Msa1378470;Name=Msa1378470-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.33|1|1|3|0|85 |
| tig0020061 | exon | 54770 | 54789 | 54770 | ID=Msa1378470-mRNA-1:exon:6063;Parent=Msa1378470-mRNA-1 |
| tig0020061 | exon | 54850 | 55030 | 54850 | ID=Msa1378470-mRNA-1:exon:6064;Parent=Msa1378470-mRNA-1 |
| tig0020061 | exon | 55695 | 55751 | 55695 | ID=Msa1378470-mRNA-1:exon:6065;Parent=Msa1378470-mRNA-1 |
| tig0020061 | CDS | 54770 | 54789 | 54770 | ID=Msa1378470-mRNA-1:cds;Parent=Msa1378470-mRNA-1 |
| tig0020061 | CDS | 54850 | 55030 | 54850 | ID=Msa1378470-mRNA-1:cds;Parent=Msa1378470-mRNA-1 |
| tig0020061 | CDS | 55695 | 55751 | 55695 | ID=Msa1378470-mRNA-1:cds;Parent=Msa1378470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
