Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089000 | RHN72973.1 | 68.919 | 74 | 23 | 0 | 8 | 81 | 53 | 126 | 1.04e-24 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089000 | A0A396J9M1 | 68.919 | 74 | 23 | 0 | 8 | 81 | 53 | 126 | 4.97e-25 | 100 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0372080 | Msa1089000 | 0.817396 | 3.369866e-52 | -8.615850e-47 |
| Msa0434920 | Msa1089000 | 0.801102 | 1.055103e-48 | -8.615850e-47 |
| Msa1089000 | Msa1256340 | 0.808383 | 3.182636e-50 | -8.615850e-47 |
| Msa0265540 | Msa1089000 | 0.839335 | 1.684786e-57 | -8.615850e-47 |
| Msa0303390 | Msa1089000 | 0.919536 | 3.980114e-87 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089000 | MtrunA17_Chr2g0293501 | 68.919 | 74 | 23 | 0 | 8 | 81 | 53 | 126 | 9.57e-29 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 47 sgRNAs with CRISPR-Local
Find 615 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAAATTTGTTAGTAAAT+AGG | 0.202369 | 7_3:-2343754 | Msa1089000:three_prime_UTR |
| TTTCAAATTTGTTAGTAAAT+AGG | 0.202369 | 7_3:-2351142 | Msa1089000:intron |
| GTAGTTGTGTAGGTTTATTT+TGG | 0.240467 | 7_3:-2343721 | Msa1089000:three_prime_UTR |
| GTGCCTTGTTTATGTCTCTC+TGG | 0.303301 | 7_3:-2344890 | Msa1089000:three_prime_UTR |
| AGACTGTAGTATTAAGCTTT+GGG | 0.340844 | 7_3:-2345130 | Msa1089000:CDS |
| GAGACTGTAGTATTAAGCTT+TGG | 0.349162 | 7_3:-2345131 | Msa1089000:CDS |
| GCCATTCTTGTGCCCATTCT+CGG | 0.356932 | 7_3:-2345005 | Msa1089000:three_prime_UTR |
| AGTTCAATTGATTAAGTCTT+GGG | 0.382570 | 7_3:-2345027 | Msa1089000:exon |
| AGACTTAATCAATTGAACTA+TGG | 0.404193 | 7_3:+2345031 | None:intergenic |
| AAGACATAATATTCCGAGAA+TGG | 0.426120 | 7_3:+2344992 | None:intergenic |
| TACTACTCCTTTAGCATCAA+TGG | 0.437086 | 7_3:-2344912 | Msa1089000:three_prime_UTR |
| TTGCCTCCACATTAAATTTG+AGG | 0.438684 | 7_3:-2343883 | Msa1089000:three_prime_UTR |
| TTGTTTATGTCTCTCTGGGC+TGG | 0.456996 | 7_3:-2344885 | Msa1089000:three_prime_UTR |
| TGCCGGTAAGAGCTGAAAAC+AGG | 0.458688 | 7_3:+2345103 | None:intergenic |
| AAGACATTCCACAAAATTGC+CGG | 0.462640 | 7_3:+2345086 | None:intergenic |
| TGCCTTGTTTATGTCTCTCT+GGG | 0.463331 | 7_3:-2344889 | Msa1089000:three_prime_UTR |
| GGAGAAGTCAGAGACAATAA+TGG | 0.475298 | 7_3:-2344825 | Msa1089000:three_prime_UTR |
| TGTGGCACAGCAAGGAACTT+TGG | 0.476177 | 7_3:-2345226 | Msa1089000:CDS |
| ATGAAAAGCTAAAAGTCAAA+GGG | 0.476189 | 7_3:+2343683 | None:intergenic |
| TCCGAGAATGGGCACAAGAA+TGG | 0.486207 | 7_3:+2345004 | None:intergenic |
| TGAAGATTTGATACAATATG+AGG | 0.491132 | 7_3:-2343805 | Msa1089000:three_prime_UTR |
| TAGTTCAATTGATTAAGTCT+TGG | 0.492347 | 7_3:-2345028 | Msa1089000:exon |
| CAAGGAACTTTGGCAGGCGG+CGG | 0.493243 | 7_3:-2345216 | Msa1089000:CDS |
| GCACAGCAAGGAACTTTGGC+AGG | 0.494065 | 7_3:-2345222 | Msa1089000:CDS |
| AGACATAATATTCCGAGAAT+GGG | 0.507948 | 7_3:+2344993 | None:intergenic |
| GTGGCTGATTAAAGCATCAA+TGG | 0.521228 | 7_3:-2344946 | Msa1089000:three_prime_UTR |
| TGAAACACTTGTAGTTGTGT+AGG | 0.531426 | 7_3:-2343731 | Msa1089000:three_prime_UTR |
| TCATTCCTTGAGAAGTCTTG+AGG | 0.532852 | 7_3:+2343825 | None:intergenic |
| TTGCCTATGGCTTATTCAAG+TGG | 0.541978 | 7_3:-2344965 | Msa1089000:three_prime_UTR |
| CATGAAAAGCTAAAAGTCAA+AGG | 0.542357 | 7_3:+2343682 | None:intergenic |
| TCTCCTCAAATTTAATGTGG+AGG | 0.542740 | 7_3:+2343880 | None:intergenic |
| CAAGGCACCATTGATGCTAA+AGG | 0.542963 | 7_3:+2344905 | None:intergenic |
| ATTTCTCCTCAAATTTAATG+TGG | 0.548593 | 7_3:+2343877 | None:intergenic |
| GACTGTAGTATTAAGCTTTG+GGG | 0.549905 | 7_3:-2345129 | Msa1089000:CDS |
| GTGAACCTCAAGACTTCTCA+AGG | 0.571090 | 7_3:-2343830 | Msa1089000:three_prime_UTR |
| CAGCCACTTGAATAAGCCAT+AGG | 0.579796 | 7_3:+2344962 | None:intergenic |
| GAGTAATGTGACTCAGAAAG+AGG | 0.581468 | 7_3:-2344800 | Msa1089000:intron |
| CAGCAAGGAACTTTGGCAGG+CGG | 0.603191 | 7_3:-2345219 | Msa1089000:CDS |
| TATAGGCTTCAACAAAGTCA+AGG | 0.609340 | 7_3:+2343632 | None:intergenic |
| TTGCGTAGACAAAGGTCACT+AGG | 0.620397 | 7_3:+2345060 | None:intergenic |
| CATCAGTGTAAATTGAGCGA+GGG | 0.629777 | 7_3:+2345181 | None:intergenic |
| ACATCAGTGTAAATTGAGCG+AGG | 0.636027 | 7_3:+2345180 | None:intergenic |
| GAAGTCAGAGACAATAATGG+AGG | 0.638749 | 7_3:-2344822 | Msa1089000:three_prime_UTR |
| GGAGACAATTGCGTAGACAA+AGG | 0.646928 | 7_3:+2345052 | None:intergenic |
| TGTAGTATTAAGCTTTGGGG+AGG | 0.656213 | 7_3:-2345126 | Msa1089000:CDS |
| TGAAAAGCTAAAAGTCAAAG+GGG | 0.675572 | 7_3:+2343684 | None:intergenic |
| AGCCCAGAGAGACATAAACA+AGG | 0.708930 | 7_3:+2344887 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAGAATCAAAATT+GGG | + | chr7_3:2346275-2346294 | None:intergenic | 10.0% |
| !! | TATTCTATAATAATATTCTA+TGG | + | chr7_3:2346576-2346595 | None:intergenic | 10.0% |
| !! | GAATATTATTATAGAATATA+TGG | - | chr7_3:2346578-2346597 | Msa1089000:intron | 10.0% |
| !!! | ATCTTATTTATTAAAATTTC+AGG | + | chr7_3:2347615-2347634 | None:intergenic | 10.0% |
| !! | ATAAATAAGATTGAAATATA+AGG | - | chr7_3:2347686-2347705 | Msa1089000:intron | 10.0% |
| !! | TAAATAAGATTGAAATATAA+GGG | - | chr7_3:2347687-2347706 | Msa1089000:intron | 10.0% |
| !!! | AATATTGATTTTTTTATTTG+TGG | - | chr7_3:2348039-2348058 | Msa1089000:intron | 10.0% |
| !! | TCATAAATAAACTTAAAATT+AGG | + | chr7_3:2348637-2348656 | None:intergenic | 10.0% |
| !! | ACAAAAATTAACTTAAAAAT+AGG | - | chr7_3:2349086-2349105 | Msa1089000:intron | 10.0% |
| !! | AAAGAATTATTTATTTATCA+TGG | - | chr7_3:2349336-2349355 | Msa1089000:intron | 10.0% |
| !! | ATTATATTTAAAAAAAACAC+GGG | - | chr7_3:2349417-2349436 | Msa1089000:intron | 10.0% |
| !! | TATTAAATATTAGTATTAAG+TGG | + | chr7_3:2349512-2349531 | None:intergenic | 10.0% |
| !! | AAAATTATTATATTCAATGA+AGG | + | chr7_3:2350313-2350332 | None:intergenic | 10.0% |
| !!! | TTGAAATTAATTTTAACTTT+CGG | - | chr7_3:2351175-2351194 | Msa1089000:intron | 10.0% |
| !!! | AACTCTTGTAATTTATTTTT+TGG | - | chr7_3:2345210-2345229 | Msa1089000:CDS | 15.0% |
| !!! | TTTTTATATTTAACAAACAG+AGG | + | chr7_3:2345262-2345281 | None:intergenic | 15.0% |
| !!! | TTAAAACATTGTTGATAAAA+AGG | - | chr7_3:2345730-2345749 | Msa1089000:intron | 15.0% |
| !!! | TTTCAAATTTGTTAGTAAAT+AGG | - | chr7_3:2346001-2346020 | Msa1089000:intron | 15.0% |
| !! | AATAAAAAGAATCAAAATTG+GGG | + | chr7_3:2346274-2346293 | None:intergenic | 15.0% |
| !! | CAAATAAAAAGAATCAAAAT+TGG | + | chr7_3:2346276-2346295 | None:intergenic | 15.0% |
| !!! | TTGATTCTTTTTATTTGAAT+AGG | - | chr7_3:2346279-2346298 | Msa1089000:intron | 15.0% |
| !!! | CTCTTATATTTTTTTATAAG+AGG | - | chr7_3:2346302-2346321 | Msa1089000:intron | 15.0% |
| !!! | TAACTATTTAAACTTACTTT+TGG | + | chr7_3:2346343-2346362 | None:intergenic | 15.0% |
| !! | CTTATTAATAAAATTCATGT+TGG | + | chr7_3:2346774-2346793 | None:intergenic | 15.0% |
| !! | TCAAAAAAAGAAAAAACAAA+CGG | - | chr7_3:2347107-2347126 | Msa1089000:intron | 15.0% |
| !!! | ATGTAATTCTTTTTTAAACT+TGG | + | chr7_3:2347257-2347276 | None:intergenic | 15.0% |
| !! | AGTTTAAAAAAGAATTACAT+AGG | - | chr7_3:2347257-2347276 | Msa1089000:intron | 15.0% |
| !! | ATAAATAAGATTGAAATCAT+TGG | - | chr7_3:2347624-2347643 | Msa1089000:intron | 15.0% |
| !! | TAAATAAGATTGAAATCATT+GGG | - | chr7_3:2347625-2347644 | Msa1089000:intron | 15.0% |
| !!! | TTTTTTTGAACAATCAAAAA+TGG | - | chr7_3:2348366-2348385 | Msa1089000:intron | 15.0% |
| !!! | ATTAGTATAAAGTATTACTT+TGG | - | chr7_3:2348595-2348614 | Msa1089000:intron | 15.0% |
| !! | ATATTACACTTCTTATAATT+AGG | - | chr7_3:2348715-2348734 | Msa1089000:intron | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | - | chr7_3:2349118-2349137 | Msa1089000:intron | 15.0% |
| !!! | AATTTGAAGGAAAATTTTAT+AGG | - | chr7_3:2349146-2349165 | Msa1089000:intron | 15.0% |
| !! | ACATTATACTAATTGTAATT+AGG | - | chr7_3:2349294-2349313 | Msa1089000:intron | 15.0% |
| !! | AACTTTGAATTAATAACATT+TGG | + | chr7_3:2350058-2350077 | None:intergenic | 15.0% |
| !! | AAATGTTATTAATTCAAAGT+TGG | - | chr7_3:2350057-2350076 | Msa1089000:intron | 15.0% |
| !!! | TTTTTACATTGTTTGTTTAT+GGG | - | chr7_3:2350185-2350204 | Msa1089000:intron | 15.0% |
| !!! | ATTATTTTTGTTTGGAATAT+TGG | - | chr7_3:2350556-2350575 | Msa1089000:intron | 15.0% |
| !! | TTTCATATATTTGTTTCATA+GGG | + | chr7_3:2351618-2351637 | None:intergenic | 15.0% |
| !! | ATTTCATATATTTGTTTCAT+AGG | + | chr7_3:2351619-2351638 | None:intergenic | 15.0% |
| !!! | TATTTTTTAGGTATAAGATA+TGG | - | chr7_3:2351754-2351773 | Msa1089000:intron | 15.0% |
| !!! | TAGTTGTATATTTTATTTGT+AGG | + | chr7_3:2351859-2351878 | None:intergenic | 15.0% |
| !! | TAAAAGAAGAAAAACTTAAA+AGG | + | chr7_3:2352484-2352503 | None:intergenic | 15.0% |
| !!! | AATCGATACAATTTTTATAA+CGG | + | chr7_3:2352566-2352585 | None:intergenic | 15.0% |
| !!! | TTTCAAATTTGTTAGTAAAT+AGG | - | chr7_3:2346001-2346020 | Msa1089000:intron | 15.0% |
| !! | TTAGAATGAAACAAATCAAT+TGG | + | chr7_3:2343721-2343740 | None:intergenic | 20.0% |
| !!! | TAGGTTTTCAATTTTCAAAT+TGG | + | chr7_3:2343791-2343810 | None:intergenic | 20.0% |
| !! | AAAATATGCATAGATAAGTA+AGG | + | chr7_3:2344987-2345006 | None:intergenic | 20.0% |
| !!! | TCTTTCTTATTTTGGAAATT+CGG | - | chr7_3:2345292-2345311 | Msa1089000:intron | 20.0% |
| !!! | AAATGATCTTTTATGATGAA+AGG | + | chr7_3:2345618-2345637 | None:intergenic | 20.0% |
| !! | ATGAATATAGAAAGAAATAC+AGG | - | chr7_3:2345667-2345686 | Msa1089000:intron | 20.0% |
| !!! | AGGAAAAATTTCTTTTAAGA+GGG | - | chr7_3:2345892-2345911 | Msa1089000:intron | 20.0% |
| !! | ATTTCTAACATATACTCAAA+TGG | - | chr7_3:2346206-2346225 | Msa1089000:intron | 20.0% |
| !! | TTTCTAACATATACTCAAAT+GGG | - | chr7_3:2346207-2346226 | Msa1089000:intron | 20.0% |
| !!! | TTAGATTAAGTTGAAATGAA+AGG | + | chr7_3:2346379-2346398 | None:intergenic | 20.0% |
| !! | TTCATTTCAACTTAATCTAA+TGG | - | chr7_3:2346379-2346398 | Msa1089000:intron | 20.0% |
| !!! | TCTTCTTTTGCAATAATTTA+CGG | - | chr7_3:2346474-2346493 | Msa1089000:intron | 20.0% |
| !! | CATGAATATTGAGTAATAAA+AGG | + | chr7_3:2346503-2346522 | None:intergenic | 20.0% |
| !!! | CTTTTATTACTCAATATTCA+TGG | - | chr7_3:2346501-2346520 | Msa1089000:intron | 20.0% |
| !!! | TTTTGTTTTTGTTGCAAATT+TGG | - | chr7_3:2346545-2346564 | Msa1089000:intron | 20.0% |
| !!! | TATTTTAGTTTTTTTCTCGA+AGG | - | chr7_3:2346608-2346627 | Msa1089000:intron | 20.0% |
| !!! | ATTTTAGTTTTTTTCTCGAA+GGG | - | chr7_3:2346609-2346628 | Msa1089000:intron | 20.0% |
| !! | GAATTAAATTAACTCATTGA+AGG | - | chr7_3:2346913-2346932 | Msa1089000:intron | 20.0% |
| !!! | TAAGTTTTAATTTAAGACAG+AGG | + | chr7_3:2346997-2347016 | None:intergenic | 20.0% |
| !! | TCTGTCTTAAATTAAAACTT+AGG | - | chr7_3:2346996-2347015 | Msa1089000:intron | 20.0% |
| !! | CTGTCTTAAATTAAAACTTA+GGG | - | chr7_3:2346997-2347016 | Msa1089000:intron | 20.0% |
| !! | TGTCTTAAATTAAAACTTAG+GGG | - | chr7_3:2346998-2347017 | Msa1089000:intron | 20.0% |
| !!! | ACAATTTTCCAATTTCAATT+TGG | + | chr7_3:2347076-2347095 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTAAACTTGGTAT+TGG | + | chr7_3:2347251-2347270 | None:intergenic | 20.0% |
| !! | TAAAAACTAAAAAGTAACCA+TGG | + | chr7_3:2347331-2347350 | None:intergenic | 20.0% |
| !!! | TTCAAGCAAATATTTTATTC+TGG | - | chr7_3:2347503-2347522 | Msa1089000:intron | 20.0% |
| !!! | TAATATTCTTCTTTTACCAA+AGG | - | chr7_3:2347530-2347549 | Msa1089000:intron | 20.0% |
| !!! | AATATTCTTCTTTTACCAAA+GGG | - | chr7_3:2347531-2347550 | Msa1089000:intron | 20.0% |
| !! | TTAAATATTTATCAACCCTT+TGG | + | chr7_3:2347549-2347568 | None:intergenic | 20.0% |
| !! | AAATAAGATTGAAATCATTG+GGG | - | chr7_3:2347626-2347645 | Msa1089000:intron | 20.0% |
| !!! | CATTTTCCATATTTAAAATC+CGG | - | chr7_3:2347768-2347787 | Msa1089000:intron | 20.0% |
| !! | AAAGATTAAGAAACTTATGA+AGG | - | chr7_3:2347945-2347964 | Msa1089000:intron | 20.0% |
| !! | ATCAATATTAGTAGTAGTTA+AGG | + | chr7_3:2348028-2348047 | None:intergenic | 20.0% |
| !!! | ATTGATTTTTTTATTTGTGG+TGG | - | chr7_3:2348042-2348061 | Msa1089000:intron | 20.0% |
| !! | TGCTTGTTTATGTATTTATT+TGG | + | chr7_3:2348163-2348182 | None:intergenic | 20.0% |
| !! | TATTGAAGCAGAAATTAAAA+AGG | - | chr7_3:2348206-2348225 | Msa1089000:intron | 20.0% |
| !! | ATTGAAGCAGAAATTAAAAA+GGG | - | chr7_3:2348207-2348226 | Msa1089000:intron | 20.0% |
| !!! | TGTAATGATGTTTTCTATTT+AGG | - | chr7_3:2348289-2348308 | Msa1089000:intron | 20.0% |
| !! | AAACAAAAAGACAAAAAAGA+CGG | + | chr7_3:2348444-2348463 | None:intergenic | 20.0% |
| !! | AATTAGGTTAAATTGCATTA+TGG | + | chr7_3:2348621-2348640 | None:intergenic | 20.0% |
| !! | TTAAGTTTATTTATGAAACC+AGG | - | chr7_3:2348641-2348660 | Msa1089000:intron | 20.0% |
| !!! | ATAAGAAGTGTAATATCTTT+GGG | + | chr7_3:2348711-2348730 | None:intergenic | 20.0% |
| !!! | TATAAGAAGTGTAATATCTT+TGG | + | chr7_3:2348712-2348731 | None:intergenic | 20.0% |
| !! | TATGAGTTTACTTTAAATGA+GGG | + | chr7_3:2348847-2348866 | None:intergenic | 20.0% |
| !! | ATATGAGTTTACTTTAAATG+AGG | + | chr7_3:2348848-2348867 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | + | chr7_3:2349114-2349133 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | - | chr7_3:2349117-2349136 | Msa1089000:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+AGG | - | chr7_3:2349178-2349197 | Msa1089000:intron | 20.0% |
| !! | TTTAACCCTAAGTTTATTTA+TGG | - | chr7_3:2349213-2349232 | Msa1089000:intron | 20.0% |
| !!! | ACGAGTTTTATATTTATTTG+CGG | + | chr7_3:2349255-2349274 | None:intergenic | 20.0% |
| !! | ACAATTAGTATAATGTCTTT+GGG | + | chr7_3:2349290-2349309 | None:intergenic | 20.0% |
| !! | TACAATTAGTATAATGTCTT+TGG | + | chr7_3:2349291-2349310 | None:intergenic | 20.0% |
| !!! | GACTTTTTTAGAAAAACTAT+TGG | - | chr7_3:2349693-2349712 | Msa1089000:intron | 20.0% |
| !!! | AGTAATTAATATTTTGTGTG+AGG | + | chr7_3:2349806-2349825 | None:intergenic | 20.0% |
| !!! | CATTTTCCAAAATATAAAAG+CGG | - | chr7_3:2349865-2349884 | Msa1089000:intron | 20.0% |
| !! | ATCAAATGACAATGTAAATT+CGG | + | chr7_3:2350022-2350041 | None:intergenic | 20.0% |
| !!! | TGAAAACCAATTTTCTAATT+AGG | - | chr7_3:2350098-2350117 | Msa1089000:intron | 20.0% |
| !!! | GAAAACCAATTTTCTAATTA+GGG | - | chr7_3:2350099-2350118 | Msa1089000:intron | 20.0% |
| !!! | GTTTTTACATTGTTTGTTTA+TGG | - | chr7_3:2350184-2350203 | Msa1089000:intron | 20.0% |
| !! | CATATAAGAAGAAACATAAA+TGG | - | chr7_3:2350394-2350413 | Msa1089000:intron | 20.0% |
| !!! | TTTCAAGCATTATTTTTGTT+TGG | - | chr7_3:2350548-2350567 | Msa1089000:intron | 20.0% |
| !!! | CATATATTTTCAATCAGTTA+TGG | - | chr7_3:2350867-2350886 | Msa1089000:intron | 20.0% |
| !!! | TGTCTTTTGCTTTTTTATAT+GGG | - | chr7_3:2351122-2351141 | Msa1089000:intron | 20.0% |
| !! | TCCAAAATCATTCATAAAAA+GGG | + | chr7_3:2351310-2351329 | None:intergenic | 20.0% |
| !! | TTCCAAAATCATTCATAAAA+AGG | + | chr7_3:2351311-2351330 | None:intergenic | 20.0% |
| !! | AAAATATGCATAGATAAGTA+TGG | + | chr7_3:2344987-2345006 | None:intergenic | 20.0% |
| !!! | TCTTTCTTTTTTTCGAAATT+CGG | - | chr7_3:2352707-2352726 | Msa1089000:intron | 20.0% |
| !! | TTTCAAAGTTATCTTTCAAT+TGG | - | chr7_3:2352948-2352967 | Msa1089000:intron | 20.0% |
| !!! | TAAATGTTTTTTACGATGAA+AGG | + | chr7_3:2353017-2353036 | None:intergenic | 20.0% |
| !! | ATATTCATCATTGTAAAACA+GGG | + | chr7_3:2353053-2353072 | None:intergenic | 20.0% |
| !! | TATATTCATCATTGTAAAAC+AGG | + | chr7_3:2353054-2353073 | None:intergenic | 20.0% |
| !! | AACTTTCAAATTATTTACCT+TGG | - | chr7_3:2353086-2353105 | Msa1089000:intron | 20.0% |
| !!! | GTTAGAATATTGTTGATAAA+AGG | - | chr7_3:2353119-2353138 | Msa1089000:intron | 20.0% |
| !! | GTGTCAAAGAGTATATAAAA+AGG | + | chr7_3:2343625-2343644 | None:intergenic | 25.0% |
| !!! | TTCAATCTGATTTTGATTCA+AGG | - | chr7_3:2343872-2343891 | Msa1089000:three_prime_UTR | 25.0% |
| ! | ATGACTAAAAAAGAAATGAC+TGG | + | chr7_3:2344478-2344497 | None:intergenic | 25.0% |
| !! | CTATGTCTTAATTTTGTCTA+TGG | - | chr7_3:2344738-2344757 | Msa1089000:intron | 25.0% |
| !!! | AATGCTTGTCTTTCTTATTT+TGG | - | chr7_3:2345284-2345303 | Msa1089000:intron | 25.0% |
| !! | ATAACAATCAAGAGAGTATA+AGG | + | chr7_3:2345418-2345437 | None:intergenic | 25.0% |
| ! | ATTTGATATGCATGTTGAAA+AGG | - | chr7_3:2345515-2345534 | Msa1089000:intron | 25.0% |
| !!! | GATCTTTTGATTGATTATCA+CGG | - | chr7_3:2345555-2345574 | Msa1089000:intron | 25.0% |
| ! | CACGGATGAAAAAAAAATTA+AGG | - | chr7_3:2345573-2345592 | Msa1089000:intron | 25.0% |
| ! | ATATTCATCGTTGTTAAACT+GGG | + | chr7_3:2345655-2345674 | None:intergenic | 25.0% |
| ! | TATATTCATCGTTGTTAAAC+TGG | + | chr7_3:2345656-2345675 | None:intergenic | 25.0% |
| ! | ATTAAACAAAAAAACTCCAC+AGG | + | chr7_3:2345813-2345832 | None:intergenic | 25.0% |
| !! | ATTTTTCCTCAAATTTAGTG+TGG | + | chr7_3:2345881-2345900 | None:intergenic | 25.0% |
| !! | GAGGAAAAATTTCTTTTAAG+AGG | - | chr7_3:2345891-2345910 | Msa1089000:intron | 25.0% |
| !!! | AAAAATTTCTTTTAAGAGGG+AGG | - | chr7_3:2345895-2345914 | Msa1089000:intron | 25.0% |
| !!! | AAAATTTCTTTTAAGAGGGA+GGG | - | chr7_3:2345896-2345915 | Msa1089000:intron | 25.0% |
| ! | TGAAGATTTGAATCAATATG+AGG | - | chr7_3:2345950-2345969 | Msa1089000:intron | 25.0% |
| ! | ATCACATAAGTAGATATCTT+TGG | - | chr7_3:2346151-2346170 | Msa1089000:intron | 25.0% |
| ! | AACCATTCTCACAATATTTA+TGG | - | chr7_3:2346441-2346460 | Msa1089000:intron | 25.0% |
| ! | AACCATAAATATTGTGAGAA+TGG | + | chr7_3:2346446-2346465 | None:intergenic | 25.0% |
| !!! | AACTGCTATTTTTTATGATG+TGG | - | chr7_3:2346732-2346751 | Msa1089000:intron | 25.0% |
| !!! | ATTTTTTGCTAGGAAAAATG+AGG | - | chr7_3:2346938-2346957 | Msa1089000:intron | 25.0% |
| !! | ATTTTCCAATTTCAATTTGG+CGG | + | chr7_3:2347073-2347092 | None:intergenic | 25.0% |
| ! | TGAAATTGGAAAATTGTGAA+TGG | - | chr7_3:2347079-2347098 | Msa1089000:intron | 25.0% |
| ! | AAGAAATTCTGTAAACCATA+AGG | + | chr7_3:2347193-2347212 | None:intergenic | 25.0% |
| ! | AGTGAATATGACAGTAATAA+TGG | + | chr7_3:2347297-2347316 | None:intergenic | 25.0% |
| !!! | AACATTACTTTTTTTCCTAC+CGG | - | chr7_3:2347469-2347488 | Msa1089000:intron | 25.0% |
| ! | AAAATGCTAGATATCAACAA+TGG | + | chr7_3:2347754-2347773 | None:intergenic | 25.0% |
| !! | GTAAAACCGGATTTTAAATA+TGG | + | chr7_3:2347777-2347796 | None:intergenic | 25.0% |
| !! | CTTTTTGCTTACAAACTATT+GGG | + | chr7_3:2347929-2347948 | None:intergenic | 25.0% |
| !! | TCTTTTTGCTTACAAACTAT+TGG | + | chr7_3:2347930-2347949 | None:intergenic | 25.0% |
| !! | AAGCAATATAGTCAGAATTT+TGG | - | chr7_3:2348178-2348197 | Msa1089000:intron | 25.0% |
| ! | TTGAAGCAGAAATTAAAAAG+GGG | - | chr7_3:2348208-2348227 | Msa1089000:intron | 25.0% |
| ! | AAAAAGGGGAATAATAGAAA+TGG | - | chr7_3:2348222-2348241 | Msa1089000:intron | 25.0% |
| !!! | TTTTTTTCCATCTTCACTTT+TGG | - | chr7_3:2348820-2348839 | Msa1089000:intron | 25.0% |
| ! | TTATAGGGACTAAAATTTGA+AGG | - | chr7_3:2349133-2349152 | Msa1089000:intron | 25.0% |
| ! | TAGGAATTAAAACGAAAAGT+TGG | - | chr7_3:2349165-2349184 | Msa1089000:intron | 25.0% |
| ! | TGGTTCCATAAATAAACTTA+GGG | + | chr7_3:2349221-2349240 | None:intergenic | 25.0% |
| ! | GACATTAACCATTATATTAC+TGG | + | chr7_3:2349719-2349738 | None:intergenic | 25.0% |
| ! | TGTAAAGTTTAGTGTTATAG+TGG | + | chr7_3:2349768-2349787 | None:intergenic | 25.0% |
| !!! | CATAAACCGCTTTTATATTT+TGG | + | chr7_3:2349874-2349893 | None:intergenic | 25.0% |
| !! | TTTTTCCTTCTGTTTAGTAA+AGG | - | chr7_3:2350137-2350156 | Msa1089000:intron | 25.0% |
| !!! | TTTTTGTTTGGAATATTGGA+AGG | - | chr7_3:2350560-2350579 | Msa1089000:intron | 25.0% |
| ! | AAACTCAGTGTTAAAATAGA+TGG | + | chr7_3:2351045-2351064 | None:intergenic | 25.0% |
| ! | TAAAAAAGCAAAAGACACAA+TGG | + | chr7_3:2351119-2351138 | None:intergenic | 25.0% |
| !!! | GTGTCTTTTGCTTTTTTATA+TGG | - | chr7_3:2351121-2351140 | Msa1089000:intron | 25.0% |
| ! | TTGGAATCCATTTAACTATT+TGG | - | chr7_3:2351325-2351344 | Msa1089000:intron | 25.0% |
| ! | TAAATAGACTAATACACAAC+TGG | + | chr7_3:2351382-2351401 | None:intergenic | 25.0% |
| !!! | GTTAACTTGTAATAATCCAT+AGG | - | chr7_3:2351405-2351424 | Msa1089000:intron | 25.0% |
| ! | GAATGCATTTCAATTATAGA+GGG | + | chr7_3:2351643-2351662 | None:intergenic | 25.0% |
| ! | AGAATGCATTTCAATTATAG+AGG | + | chr7_3:2351644-2351663 | None:intergenic | 25.0% |
| !!! | CTACTTGTTGCTTATTTTTT+AGG | - | chr7_3:2351742-2351761 | Msa1089000:intron | 25.0% |
| !!! | TTTTAGGTATAAGATATGGT+AGG | - | chr7_3:2351758-2351777 | Msa1089000:intron | 25.0% |
| ! | TTGTAGGCATTATTACAAAA+TGG | + | chr7_3:2351843-2351862 | None:intergenic | 25.0% |
| ! | AGACTTAATCAATTGAACTA+TGG | + | chr7_3:2352115-2352134 | None:intergenic | 25.0% |
| ! | TAGTTCAATTGATTAAGTCT+TGG | - | chr7_3:2352115-2352134 | Msa1089000:intron | 25.0% |
| ! | AGTTCAATTGATTAAGTCTT+GGG | - | chr7_3:2352116-2352135 | Msa1089000:intron | 25.0% |
| !! | TTATGTCTTAATTTTGCCTA+TGG | - | chr7_3:2352165-2352184 | Msa1089000:intron | 25.0% |
| !! | AAGTTTTTCTTCTTTTACAC+AGG | - | chr7_3:2352487-2352506 | Msa1089000:intron | 25.0% |
| !! | GCATTTTTGCAAATATAACA+GGG | + | chr7_3:2352684-2352703 | None:intergenic | 25.0% |
| !! | AGCATTTTTGCAAATATAAC+AGG | + | chr7_3:2352685-2352704 | None:intergenic | 25.0% |
| !!! | TTTTTTCGAAATTCGGTATT+CGG | - | chr7_3:2352714-2352733 | Msa1089000:intron | 25.0% |
| ! | ATTTGATATGCATGTTGAAA+AGG | - | chr7_3:2345515-2345534 | Msa1089000:intron | 25.0% |
| ! | TTTGATATGCATGTTGAAAA+GGG | - | chr7_3:2345516-2345535 | Msa1089000:intron | 25.0% |
| ! | TATCACGATGAAAAAAATGA+AGG | - | chr7_3:2352972-2352991 | Msa1089000:intron | 25.0% |
| ! | CATCAAATATAACAAGTAGA+TGG | + | chr7_3:2353156-2353175 | None:intergenic | 25.0% |
| ! | AATAAAAAAAAAACCTCCAC+AGG | + | chr7_3:2353202-2353221 | None:intergenic | 25.0% |
| ! | ATTTCTCCTCAAATTTAATG+TGG | + | chr7_3:2353269-2353288 | None:intergenic | 25.0% |
| !!! | AGGAGAAATTTCTTTTAAGA+GGG | - | chr7_3:2353280-2353299 | Msa1089000:intron | 25.0% |
| ! | TGAAGATTTGATACAATATG+AGG | - | chr7_3:2353338-2353357 | Msa1089000:intron | 25.0% |
| ! | ATGAAAAGCTAAAAGTCAAA+GGG | + | chr7_3:2353463-2353482 | None:intergenic | 25.0% |
| !! | ACTACAAAAAAGTCTTGTAT+AGG | + | chr7_3:2353531-2353550 | None:intergenic | 25.0% |
| !!! | ATCAATTGGTACCTTTTTTC+TGG | + | chr7_3:2343707-2343726 | None:intergenic | 30.0% |
| TTAGACTATGGAAGTTTAAC+TGG | + | chr7_3:2343943-2343962 | None:intergenic | 30.0% | |
| ACAGACAATAAAGTTTGAGA+CGG | + | chr7_3:2344126-2344145 | None:intergenic | 30.0% | |
| TGCAATGTTCATGAGTATTA+TGG | + | chr7_3:2344318-2344337 | None:intergenic | 30.0% | |
| !! | TTGCATTTTAGCATTTCAAC+TGG | - | chr7_3:2344333-2344352 | Msa1089000:intron | 30.0% |
| ! | ATACTTAAGTACACCACTTT+TGG | + | chr7_3:2344360-2344379 | None:intergenic | 30.0% |
| ! | AAGGAGACTTTTAAATCGAT+GGG | + | chr7_3:2344397-2344416 | None:intergenic | 30.0% |
| ! | AAAGGAGACTTTTAAATCGA+TGG | + | chr7_3:2344398-2344417 | None:intergenic | 30.0% |
| GTGACGAAGAAACTTAAATA+GGG | - | chr7_3:2344427-2344446 | Msa1089000:intron | 30.0% | |
| TGACGAAGAAACTTAAATAG+GGG | - | chr7_3:2344428-2344447 | Msa1089000:intron | 30.0% | |
| ATACATACATAAGCAAGGTA+AGG | + | chr7_3:2345707-2345726 | None:intergenic | 30.0% | |
| AACACATACATACATAAGCA+AGG | + | chr7_3:2345712-2345731 | None:intergenic | 30.0% | |
| AAACACCAAATGTAACAAGT+AGG | + | chr7_3:2345770-2345789 | None:intergenic | 30.0% | |
| TAATAATGCTCAAACCTACA+GGG | + | chr7_3:2346074-2346093 | None:intergenic | 30.0% | |
| CTTATTGTAAATGTGATCAG+AGG | + | chr7_3:2346098-2346117 | None:intergenic | 30.0% | |
| CTCTGATCACATTTACAATA+AGG | - | chr7_3:2346096-2346115 | Msa1089000:intron | 30.0% | |
| CAAGAAGGATTCATTATACA+AGG | + | chr7_3:2346130-2346149 | None:intergenic | 30.0% | |
| CTTGTATAATGAATCCTTCT+TGG | - | chr7_3:2346128-2346147 | Msa1089000:intron | 30.0% | |
| TAGATATCTTTGGATACTCT+TGG | - | chr7_3:2346161-2346180 | Msa1089000:intron | 30.0% | |
| GAGTTTGTATGATATAGCTT+AGG | - | chr7_3:2346237-2346256 | Msa1089000:intron | 30.0% | |
| TGGTTTGAATATTCTATGTG+CGG | - | chr7_3:2346521-2346540 | Msa1089000:intron | 30.0% | |
| !!! | ATTGAAGGTGATTTTTTGCT+AGG | - | chr7_3:2346928-2346947 | Msa1089000:intron | 30.0% |
| GAGGAATCTTGTATTTCAAA+TGG | - | chr7_3:2346957-2346976 | Msa1089000:intron | 30.0% | |
| !!! | CAATACAGTTTTTTACCTCA+GGG | + | chr7_3:2347134-2347153 | None:intergenic | 30.0% |
| !! | TTTTATTTGAGAGACTAACG+TGG | + | chr7_3:2347224-2347243 | None:intergenic | 30.0% |
| !! | TTTCTAGCTAGCAAATGAAA+TGG | + | chr7_3:2347420-2347439 | None:intergenic | 30.0% |
| !! | TGATGGATTCAAGAATGATA+TGG | + | chr7_3:2347724-2347743 | None:intergenic | 30.0% |
| !! | TCAACAATGGATTTTCTTGA+TGG | + | chr7_3:2347741-2347760 | None:intergenic | 30.0% |
| TAAATCCACTTGAGAACAAA+GGG | - | chr7_3:2347817-2347836 | Msa1089000:intron | 30.0% | |
| TAAATCCACTTGAGAACAAA+GGG | - | chr7_3:2347817-2347836 | Msa1089000:intron | 30.0% | |
| !!! | TTTTAATCTTGGTGTTCACA+GGG | + | chr7_3:2347900-2347919 | None:intergenic | 30.0% |
| !!! | ATTTTAATCTTGGTGTTCAC+AGG | + | chr7_3:2347901-2347920 | None:intergenic | 30.0% |
| AATACATGCAAGGTAAACAT+CGG | + | chr7_3:2348068-2348087 | None:intergenic | 30.0% | |
| AACAATGCATAATACATGCA+AGG | + | chr7_3:2348078-2348097 | None:intergenic | 30.0% | |
| !! | AGTCTATTATTTTTCCCAGT+TGG | - | chr7_3:2348500-2348519 | Msa1089000:intron | 30.0% |
| GTTTCCATTTCAATGCAAAT+AGG | + | chr7_3:2348555-2348574 | None:intergenic | 30.0% | |
| GTTTATTTATGAAACCAGGA+TGG | - | chr7_3:2348645-2348664 | Msa1089000:intron | 30.0% | |
| CTTCTTATAATTAGGTTCTG+AGG | - | chr7_3:2348723-2348742 | Msa1089000:intron | 30.0% | |
| CTGGTTCCATAAATAAACTT+AGG | + | chr7_3:2349222-2349241 | None:intergenic | 30.0% | |
| CTAAGTTTATTTATGGAACC+AGG | - | chr7_3:2349220-2349239 | Msa1089000:intron | 30.0% | |
| ACTATTGGCCAGTAATATAA+TGG | - | chr7_3:2349708-2349727 | Msa1089000:intron | 30.0% | |
| CAATGTAAATTCGGAAAGTA+TGG | + | chr7_3:2350013-2350032 | None:intergenic | 30.0% | |
| GTATGCCCTAATTAGAAAAT+TGG | + | chr7_3:2350107-2350126 | None:intergenic | 30.0% | |
| TTTCTAATTAGGGCATACTT+AGG | - | chr7_3:2350109-2350128 | Msa1089000:intron | 30.0% | |
| ACAATCCTTTACTAAACAGA+AGG | + | chr7_3:2350145-2350164 | None:intergenic | 30.0% | |
| TACTTCAATTGGTAAAGAGT+TGG | + | chr7_3:2350289-2350308 | None:intergenic | 30.0% | |
| TCAATGAAGGTTACTTCAAT+TGG | + | chr7_3:2350300-2350319 | None:intergenic | 30.0% | |
| GAAGAAACATAAATGGTTGA+AGG | - | chr7_3:2350401-2350420 | Msa1089000:intron | 30.0% | |
| AACATAAATGGTTGAAGGAA+AGG | - | chr7_3:2350406-2350425 | Msa1089000:intron | 30.0% | |
| ACATAAATGGTTGAAGGAAA+GGG | - | chr7_3:2350407-2350426 | Msa1089000:intron | 30.0% | |
| AAAATAAACCACTTTGTGTG+CGG | - | chr7_3:2350614-2350633 | Msa1089000:intron | 30.0% | |
| TTCCTCGTTTGTTTAGTATA+TGG | - | chr7_3:2350638-2350657 | Msa1089000:intron | 30.0% | |
| TCCTCGTTTGTTTAGTATAT+GGG | - | chr7_3:2350639-2350658 | Msa1089000:intron | 30.0% | |
| ! | AAAAACACACCACCATTTTA+TGG | + | chr7_3:2350779-2350798 | None:intergenic | 30.0% |
| !! | ATAAAATGGTGGTGTGTTTT+TGG | - | chr7_3:2350778-2350797 | Msa1089000:intron | 30.0% |
| !!! | TTTGCTTTTTTATATGGGTC+TGG | - | chr7_3:2351127-2351146 | Msa1089000:intron | 30.0% |
| TTTCGGTAATTTGAGTGATT+TGG | - | chr7_3:2351192-2351211 | Msa1089000:intron | 30.0% | |
| AAAGTTGTAGATGAATCCAA+AGG | - | chr7_3:2351263-2351282 | Msa1089000:intron | 30.0% | |
| AAGTTGTAGATGAATCCAAA+GGG | - | chr7_3:2351264-2351283 | Msa1089000:intron | 30.0% | |
| ! | ATCATTCATAAAAAGGGCAT+GGG | + | chr7_3:2351304-2351323 | None:intergenic | 30.0% |
| AATCATTCATAAAAAGGGCA+TGG | + | chr7_3:2351305-2351324 | None:intergenic | 30.0% | |
| ! | GCCCTTTTTATGAATGATTT+TGG | - | chr7_3:2351306-2351325 | Msa1089000:intron | 30.0% |
| ATCCATTTAACTATTTGGCT+CGG | - | chr7_3:2351330-2351349 | Msa1089000:intron | 30.0% | |
| ! | CACTTTTAATCATAGTCAAC+TGG | + | chr7_3:2351473-2351492 | None:intergenic | 30.0% |
| ! | ATGAAAAAGTGTGGGATAAA+TGG | + | chr7_3:2351507-2351526 | None:intergenic | 30.0% |
| ! | CCATATGAATGAAAAAGTGT+GGG | + | chr7_3:2351515-2351534 | None:intergenic | 30.0% |
| ACCATATGAATGAAAAAGTG+TGG | + | chr7_3:2351516-2351535 | None:intergenic | 30.0% | |
| TATCACAAGTTCTTAAAAGC+AGG | + | chr7_3:2351720-2351739 | None:intergenic | 30.0% | |
| ! | ACTACAGTCTCTTTTTGATA+AGG | + | chr7_3:2352003-2352022 | None:intergenic | 30.0% |
| AGACTGTAGTATTAAGCTTT+GGG | - | chr7_3:2352013-2352032 | Msa1089000:intron | 30.0% | |
| AGACATAATATTCCGAGAAT+GGG | + | chr7_3:2352153-2352172 | None:intergenic | 30.0% | |
| AAGACATAATATTCCGAGAA+TGG | + | chr7_3:2352154-2352173 | None:intergenic | 30.0% | |
| ! | TAGGAGTAGACTTAGAATTT+TGG | + | chr7_3:2352660-2352679 | None:intergenic | 30.0% |
| TTTGCAAATATAACAGGGAT+AGG | + | chr7_3:2352679-2352698 | None:intergenic | 30.0% | |
| ! | GATTGATTCTCATGATTAGT+CGG | + | chr7_3:2352748-2352767 | None:intergenic | 30.0% |
| ! | AGAACAATCATGAGAGTATA+AGG | + | chr7_3:2352820-2352839 | None:intergenic | 30.0% |
| TTCTAACACATTCATAACCA+AGG | + | chr7_3:2353106-2353125 | None:intergenic | 30.0% | |
| ! | TGTTGATAAAAGGAGATCAT+CGG | - | chr7_3:2353129-2353148 | Msa1089000:intron | 30.0% |
| ! | GAGGAGAAATTTCTTTTAAG+AGG | - | chr7_3:2353279-2353298 | Msa1089000:intron | 30.0% |
| !! | AGAAATTTCTTTTAAGAGGG+AGG | - | chr7_3:2353283-2353302 | Msa1089000:intron | 30.0% |
| !! | GAAATTTCTTTTAAGAGGGA+GGG | - | chr7_3:2353284-2353303 | Msa1089000:intron | 30.0% |
| ! | GTAGTTGTGTAGGTTTATTT+TGG | - | chr7_3:2353422-2353441 | Msa1089000:intron | 30.0% |
| TGAAAAGCTAAAAGTCAAAG+GGG | + | chr7_3:2353462-2353481 | None:intergenic | 30.0% | |
| CATGAAAAGCTAAAAGTCAA+AGG | + | chr7_3:2353464-2353483 | None:intergenic | 30.0% | |
| ATCGGCAACAATTCTTTACT+AGG | + | chr7_3:2343810-2343829 | None:intergenic | 35.0% | |
| ATGCACAGTTACACATGTAT+CGG | + | chr7_3:2343828-2343847 | None:intergenic | 35.0% | |
| CCTACACTAACATTAGACTA+TGG | + | chr7_3:2343955-2343974 | None:intergenic | 35.0% | |
| CCATAGTCTAATGTTAGTGT+AGG | - | chr7_3:2343952-2343971 | Msa1089000:intron | 35.0% | |
| GAGACGGAAATAAAGCTTAA+GGG | + | chr7_3:2344110-2344129 | None:intergenic | 35.0% | |
| TGAGACGGAAATAAAGCTTA+AGG | + | chr7_3:2344111-2344130 | None:intergenic | 35.0% | |
| TTGAGGCGAAAATAAAGCAT+GGG | + | chr7_3:2344168-2344187 | None:intergenic | 35.0% | |
| ACGGAAAATAAAGCTTAGGA+CGG | + | chr7_3:2344220-2344239 | None:intergenic | 35.0% | |
| TCAGACGGAAAATAAAGCTT+AGG | + | chr7_3:2344224-2344243 | None:intergenic | 35.0% | |
| CGTGACGAAGAAACTTAAAT+AGG | - | chr7_3:2344426-2344445 | Msa1089000:intron | 35.0% | |
| ! | AAATGACTGGTCCAAAATTG+GGG | + | chr7_3:2344465-2344484 | None:intergenic | 35.0% |
| ! | GAAATGACTGGTCCAAAATT+GGG | + | chr7_3:2344466-2344485 | None:intergenic | 35.0% |
| ! | AGAAATGACTGGTCCAAAAT+TGG | + | chr7_3:2344467-2344486 | None:intergenic | 35.0% |
| ! | AAGTGAAGTTCATTTTGTCC+AGG | - | chr7_3:2344594-2344613 | Msa1089000:intron | 35.0% |
| AGAAATAATTACACGAAGCC+TGG | + | chr7_3:2344615-2344634 | None:intergenic | 35.0% | |
| AGACATAGCATTCCAAGAAT+GGG | + | chr7_3:2344726-2344745 | None:intergenic | 35.0% | |
| AAGACATAGCATTCCAAGAA+TGG | + | chr7_3:2344727-2344746 | None:intergenic | 35.0% | |
| TTGTCTATGGCTTATTCAAG+TGG | - | chr7_3:2344751-2344770 | Msa1089000:intron | 35.0% | |
| !!! | TACATGCTTGTGCTTTTTCT+TGG | - | chr7_3:2344870-2344889 | Msa1089000:three_prime_UTR | 35.0% |
| ! | GGAGTAGAGAGTTAGAATTT+TGG | + | chr7_3:2345241-2345260 | None:intergenic | 35.0% |
| TGAAGAAGTCATTCAACTTG+TGG | + | chr7_3:2345452-2345471 | None:intergenic | 35.0% | |
| TGTATGCTTTGATGCTAATG+CGG | - | chr7_3:2345482-2345501 | Msa1089000:intron | 35.0% | |
| !! | TTAAGGTACTCCACTTTTGT+TGG | - | chr7_3:2345590-2345609 | Msa1089000:intron | 35.0% |
| ATGAAAGGTTCCAACAAAAG+TGG | + | chr7_3:2345603-2345622 | None:intergenic | 35.0% | |
| ! | ATCCACCTACTTGTTACATT+TGG | - | chr7_3:2345762-2345781 | Msa1089000:intron | 35.0% |
| TCAATTTCCATTTGATCCTG+TGG | - | chr7_3:2345794-2345813 | Msa1089000:intron | 35.0% | |
| AAAAACTCCACAGGATCAAA+TGG | + | chr7_3:2345804-2345823 | None:intergenic | 35.0% | |
| TTACTCTGTTGTCTTCATGT+AGG | - | chr7_3:2345849-2345868 | Msa1089000:intron | 35.0% | |
| TTTCCTCAAATTTAGTGTGG+AGG | + | chr7_3:2345878-2345897 | None:intergenic | 35.0% | |
| ! | GTAGTTGTGCAGGTTTATTT+TGG | - | chr7_3:2346034-2346053 | Msa1089000:intron | 35.0% |
| AATAATGCTCAAACCTACAG+GGG | + | chr7_3:2346073-2346092 | None:intergenic | 35.0% | |
| CTAATAATGCTCAAACCTAC+AGG | + | chr7_3:2346075-2346094 | None:intergenic | 35.0% | |
| TCTACTTATGTGATCCAAGA+AGG | + | chr7_3:2346145-2346164 | None:intergenic | 35.0% | |
| ATGATATAGCTTAGGCAGTT+AGG | - | chr7_3:2346245-2346264 | Msa1089000:intron | 35.0% | |
| AAATGAAAGGTGAAGATGTG+GGG | + | chr7_3:2346366-2346385 | None:intergenic | 35.0% | |
| GAAATGAAAGGTGAAGATGT+GGG | + | chr7_3:2346367-2346386 | None:intergenic | 35.0% | |
| TGAAATGAAAGGTGAAGATG+TGG | + | chr7_3:2346368-2346387 | None:intergenic | 35.0% | |
| TCTTTGTGGAAGCTTATGAT+AGG | + | chr7_3:2346645-2346664 | None:intergenic | 35.0% | |
| ATGCGATGCTTCAAAAGATT+TGG | - | chr7_3:2346829-2346848 | Msa1089000:intron | 35.0% | |
| TGCGATGCTTCAAAAGATTT+GGG | - | chr7_3:2346830-2346849 | Msa1089000:intron | 35.0% | |
| TTCATCATAGACTCCATACA+TGG | - | chr7_3:2346875-2346894 | Msa1089000:intron | 35.0% | |
| TCTACAATTCCTTCCATGTA+TGG | + | chr7_3:2346891-2346910 | None:intergenic | 35.0% | |
| TACATGGAAGGAATTGTAGA+TGG | - | chr7_3:2346891-2346910 | Msa1089000:intron | 35.0% | |
| !!! | CCAATACAGTTTTTTACCTC+AGG | + | chr7_3:2347135-2347154 | None:intergenic | 35.0% |
| CCTGAGGTAAAAAACTGTAT+TGG | - | chr7_3:2347132-2347151 | Msa1089000:intron | 35.0% | |
| ATAAGGTGAAAGCAAGATAC+AGG | + | chr7_3:2347176-2347195 | None:intergenic | 35.0% | |
| TGTATCTTGCTTTCACCTTA+TGG | - | chr7_3:2347175-2347194 | Msa1089000:intron | 35.0% | |
| TTCACTAAGACTTACTACCA+TGG | - | chr7_3:2347311-2347330 | Msa1089000:intron | 35.0% | |
| AAACTCTGTAAAAAGCTGCA+TGG | + | chr7_3:2347360-2347379 | None:intergenic | 35.0% | |
| TGCTTGAACTACTTATGTTC+CGG | + | chr7_3:2347491-2347510 | None:intergenic | 35.0% | |
| TAAGATTGAAATCATTGGGG+TGG | - | chr7_3:2347629-2347648 | Msa1089000:intron | 35.0% | |
| CTGCTAATGATGTGTAAAAC+CGG | + | chr7_3:2347790-2347809 | None:intergenic | 35.0% | |
| CTAAATCCACTTGAGAACAA+AGG | - | chr7_3:2347816-2347835 | Msa1089000:intron | 35.0% | |
| CTAAATCCACTTGAGAACAA+AGG | - | chr7_3:2347816-2347835 | Msa1089000:intron | 35.0% | |
| !! | TTGGGAACGGATTTTAATCT+TGG | + | chr7_3:2347911-2347930 | None:intergenic | 35.0% |
| TGCTTACAAACTATTGGGAA+CGG | + | chr7_3:2347924-2347943 | None:intergenic | 35.0% | |
| AGGGGAATAATAGAAATGGA+TGG | - | chr7_3:2348226-2348245 | Msa1089000:intron | 35.0% | |
| CAAAAAGACAAAAAAGACGG+TGG | + | chr7_3:2348441-2348460 | None:intergenic | 35.0% | |
| TTCAATGCAAATAGGCTCAT+AGG | + | chr7_3:2348547-2348566 | None:intergenic | 35.0% | |
| TGAGCCTATTTGCATTGAAA+TGG | - | chr7_3:2348548-2348567 | Msa1089000:intron | 35.0% | |
| TATTTGCAGTTTATCCATCC+TGG | + | chr7_3:2348662-2348681 | None:intergenic | 35.0% | |
| ! | GTAATATCTTTGGGTTTGTG+TGG | + | chr7_3:2348702-2348721 | None:intergenic | 35.0% |
| !! | CTTATAATTAGGTTCTGAGG+CGG | - | chr7_3:2348726-2348745 | Msa1089000:intron | 35.0% |
| GTTTATTTATGGAACCAGGA+TGG | - | chr7_3:2349224-2349243 | Msa1089000:intron | 35.0% | |
| CACATAACTTAAGTTCCACA+CGG | - | chr7_3:2349624-2349643 | Msa1089000:intron | 35.0% | |
| ACATAACTTAAGTTCCACAC+GGG | - | chr7_3:2349625-2349644 | Msa1089000:intron | 35.0% | |
| TCCTAAATGAAGTGTAGCTA+CGG | + | chr7_3:2350365-2350384 | None:intergenic | 35.0% | |
| CATAAATGGTTGAAGGAAAG+GGG | - | chr7_3:2350408-2350427 | Msa1089000:intron | 35.0% | |
| TTCATGCTTGTGTTAAGCAT+AGG | - | chr7_3:2350449-2350468 | Msa1089000:intron | 35.0% | |
| GGAGAAGATCAATTTGATCA+AGG | - | chr7_3:2350470-2350489 | Msa1089000:intron | 35.0% | |
| !!! | TTGGAAGGTTGACTAGTTTT+AGG | - | chr7_3:2350575-2350594 | Msa1089000:intron | 35.0% |
| !!! | AAGGTTGACTAGTTTTAGGA+AGG | - | chr7_3:2350579-2350598 | Msa1089000:intron | 35.0% |
| !!! | CTAGTTTTAGGAAGGATACT+TGG | - | chr7_3:2350587-2350606 | Msa1089000:intron | 35.0% |
| TCCCATATACTAAACAAACG+AGG | + | chr7_3:2350643-2350662 | None:intergenic | 35.0% | |
| !!! | TAGGGAATTCTTTGTTTTGG+AGG | - | chr7_3:2350730-2350749 | Msa1089000:intron | 35.0% |
| !!! | GGATGAAATGGATTTTAGCT+GGG | + | chr7_3:2350823-2350842 | None:intergenic | 35.0% |
| !! | AGGATGAAATGGATTTTAGC+TGG | + | chr7_3:2350824-2350843 | None:intergenic | 35.0% |
| TTGGACAGATTCATCATGTT+TGG | + | chr7_3:2350953-2350972 | None:intergenic | 35.0% | |
| TATCCCTCAATCAGATATGT+TGG | - | chr7_3:2350982-2351001 | Msa1089000:intron | 35.0% | |
| AGTCCAACATATCTGATTGA+GGG | + | chr7_3:2350988-2351007 | None:intergenic | 35.0% | |
| AAAAGCAAAAGACACAATGG+CGG | + | chr7_3:2351116-2351135 | None:intergenic | 35.0% | |
| ! | AGTGATTTGGAAATCCAAGA+AGG | - | chr7_3:2351205-2351224 | Msa1089000:intron | 35.0% |
| ATTGAATATGCGATCCTTCT+TGG | + | chr7_3:2351222-2351241 | None:intergenic | 35.0% | |
| ! | TCATTCATAAAAAGGGCATG+GGG | + | chr7_3:2351303-2351322 | None:intergenic | 35.0% |
| TACCGAGCCAAATAGTTAAA+TGG | + | chr7_3:2351335-2351354 | None:intergenic | 35.0% | |
| CTCAAGTAATGAATGTCCTA+TGG | + | chr7_3:2351424-2351443 | None:intergenic | 35.0% | |
| !!! | CCCACACTTTTTCATTCATA+TGG | - | chr7_3:2351512-2351531 | Msa1089000:intron | 35.0% |
| AAGGAGATGTGAATTATGCA+GGG | + | chr7_3:2351564-2351583 | None:intergenic | 35.0% | |
| TATTGGAGATGGAAATCTCA+AGG | + | chr7_3:2351583-2351602 | None:intergenic | 35.0% | |
| AGAGAGAATCTTATTGGAGA+TGG | + | chr7_3:2351594-2351613 | None:intergenic | 35.0% | |
| TAGGGAAGAGAGAATCTTAT+TGG | + | chr7_3:2351600-2351619 | None:intergenic | 35.0% | |
| GTTCAGAGAAACCAAAAATG+TGG | - | chr7_3:2351899-2351918 | Msa1089000:intron | 35.0% | |
| GAGACTGTAGTATTAAGCTT+TGG | - | chr7_3:2352012-2352031 | Msa1089000:intron | 35.0% | |
| GACTGTAGTATTAAGCTTTG+GGG | - | chr7_3:2352014-2352033 | Msa1089000:intron | 35.0% | |
| AAGACATTCCACAAAATTGC+CGG | + | chr7_3:2352060-2352079 | None:intergenic | 35.0% | |
| TACTACTCCTTTAGCATCAA+TGG | - | chr7_3:2352231-2352250 | Msa1089000:intron | 35.0% | |
| AATCCCCCTATCTATTATCA+GGG | - | chr7_3:2352764-2352783 | Msa1089000:intron | 35.0% | |
| CAAAGAAGTCATTCAACTTG+TGG | + | chr7_3:2352854-2352873 | None:intergenic | 35.0% | |
| ! | CACAAGTTGAATGACTTCTT+TGG | - | chr7_3:2345450-2345469 | Msa1089000:intron | 35.0% |
| !!! | TGTATGTTTTGATGCTACTG+TGG | - | chr7_3:2352884-2352903 | Msa1089000:intron | 35.0% |
| ATGAAAGGTTCCAACAAAAG+TGG | + | chr7_3:2345603-2345622 | None:intergenic | 35.0% | |
| TCATTGTAAAACAGGGCTTA+GGG | + | chr7_3:2353046-2353065 | None:intergenic | 35.0% | |
| ATCATTGTAAAACAGGGCTT+AGG | + | chr7_3:2353047-2353066 | None:intergenic | 35.0% | |
| TCAATTTCCATTTGATCCTG+TGG | - | chr7_3:2345794-2345813 | Msa1089000:intron | 35.0% | |
| TTACTCTGTTGTCTTCATGT+AGG | - | chr7_3:2345849-2345868 | Msa1089000:intron | 35.0% | |
| TTGCCTCCACATTAAATTTG+AGG | - | chr7_3:2353260-2353279 | Msa1089000:intron | 35.0% | |
| TCTCCTCAAATTTAATGTGG+AGG | + | chr7_3:2353266-2353285 | None:intergenic | 35.0% | |
| TGAAACACTTGTAGTTGTGT+AGG | - | chr7_3:2353412-2353431 | Msa1089000:intron | 35.0% | |
| TATAGGCTTCAACAAAGTCA+AGG | + | chr7_3:2353514-2353533 | None:intergenic | 35.0% | |
| ! | AAGGCGTCTAATGTTAGTGT+AGG | - | chr7_3:2343891-2343910 | Msa1089000:intron | 40.0% |
| TAGTGTAGGCGATTCGAATT+TGG | - | chr7_3:2343905-2343924 | Msa1089000:intron | 40.0% | |
| TTAGTGTAGGCGAGTCAAAT+TGG | - | chr7_3:2343965-2343984 | Msa1089000:intron | 40.0% | |
| TAGTGTAGGCGAGTCAAATT+GGG | - | chr7_3:2343966-2343985 | Msa1089000:intron | 40.0% | |
| AAGGGAAGTAAAGCTTGAGA+CGG | + | chr7_3:2344092-2344111 | None:intergenic | 40.0% | |
| CTTGAGGCGAAAATAAAGCA+TGG | + | chr7_3:2344169-2344188 | None:intergenic | 40.0% | |
| GAGACGGAAAGTAAAACTTG+AGG | + | chr7_3:2344185-2344204 | None:intergenic | 40.0% | |
| CGGAAAATAAAGCTTAGGAC+GGG | + | chr7_3:2344219-2344238 | None:intergenic | 40.0% | |
| CGACGAACATAGTAAAGCTT+GGG | + | chr7_3:2344260-2344279 | None:intergenic | 40.0% | |
| ACGACGAACATAGTAAAGCT+TGG | + | chr7_3:2344261-2344280 | None:intergenic | 40.0% | |
| CATTTCAACTGGTCCAAAAG+TGG | - | chr7_3:2344344-2344363 | Msa1089000:intron | 40.0% | |
| CTTCGTCACGAAGATTTGAA+AGG | + | chr7_3:2344416-2344435 | None:intergenic | 40.0% | |
| ! | CATCTGTCATACCCCAATTT+TGG | - | chr7_3:2344451-2344470 | Msa1089000:intron | 40.0% |
| TTTCCTCTTTGTCCCATTCT+TGG | - | chr7_3:2344711-2344730 | Msa1089000:intron | 40.0% | |
| ATTCCAAGAATGGGACAAAG+AGG | + | chr7_3:2344717-2344736 | None:intergenic | 40.0% | |
| TGATTCTAACGGAGTAGCAT+AGG | + | chr7_3:2344803-2344822 | None:intergenic | 40.0% | |
| TGCTACTCCGTTAGAATCAA+TGG | - | chr7_3:2344804-2344823 | Msa1089000:three_prime_UTR | 40.0% | |
| !! | CAAGGCACCATTGATTCTAA+CGG | + | chr7_3:2344814-2344833 | None:intergenic | 40.0% |
| !! | TGCCTTGTTTATGTCTCTCT+GGG | - | chr7_3:2344827-2344846 | Msa1089000:three_prime_UTR | 40.0% |
| AACCCAGAGAGACATAAACA+AGG | + | chr7_3:2344832-2344851 | None:intergenic | 40.0% | |
| TTTATGTCTCTCTGGGTTCT+TGG | - | chr7_3:2344834-2344853 | Msa1089000:three_prime_UTR | 40.0% | |
| !!! | ATGCTTGTGCTTTTTCTTGG+AGG | - | chr7_3:2344873-2344892 | Msa1089000:three_prime_UTR | 40.0% |
| TGTCAAAGAGAAAGTAGACG+AGG | - | chr7_3:2344899-2344918 | Msa1089000:three_prime_UTR | 40.0% | |
| GAGTAATGTGACTCAGAATG+AGG | - | chr7_3:2344921-2344940 | Msa1089000:three_prime_UTR | 40.0% | |
| CATTCAACTTGTGGTTCACA+AGG | + | chr7_3:2345443-2345462 | None:intergenic | 40.0% | |
| CACCAAATGTAACAAGTAGG+TGG | + | chr7_3:2345767-2345786 | None:intergenic | 40.0% | |
| GAAGACAACAGAGTAAGTCA+AGG | + | chr7_3:2345845-2345864 | None:intergenic | 40.0% | |
| TTGCCTCCACACTAAATTTG+AGG | - | chr7_3:2345872-2345891 | Msa1089000:intron | 40.0% | |
| TGAAACACTTGTAGTTGTGC+AGG | - | chr7_3:2346024-2346043 | Msa1089000:intron | 40.0% | |
| AGCATGTATATTACCCCTGT+AGG | - | chr7_3:2346057-2346076 | Msa1089000:intron | 40.0% | |
| ! | TCCACAAAGAGCTCTTTTGA+TGG | - | chr7_3:2346655-2346674 | Msa1089000:intron | 40.0% |
| ACCATCAAAAGAGCTCTTTG+TGG | + | chr7_3:2346659-2346678 | None:intergenic | 40.0% | |
| GCAGTTCACTGCAAAATAGA+AGG | + | chr7_3:2346718-2346737 | None:intergenic | 40.0% | |
| TCATAGACTCCATACATGGA+AGG | - | chr7_3:2346879-2346898 | Msa1089000:intron | 40.0% | |
| TTGCACCGCCAAATTGAAAT+TGG | - | chr7_3:2347065-2347084 | Msa1089000:intron | 40.0% | |
| AAAGCAAGATACAGGTAACC+GGG | + | chr7_3:2347168-2347187 | None:intergenic | 40.0% | |
| GAAAGCAAGATACAGGTAAC+CGG | + | chr7_3:2347169-2347188 | None:intergenic | 40.0% | |
| CTAGCTAGCAAATGAAATGG+AGG | + | chr7_3:2347417-2347436 | None:intergenic | 40.0% | |
| TGAACTACTTATGTTCCGGT+AGG | + | chr7_3:2347487-2347506 | None:intergenic | 40.0% | |
| ATTGAAATCATTGGGGTGGT+GGG | - | chr7_3:2347633-2347652 | Msa1089000:intron | 40.0% | |
| TTGAGAACAAAGGGCAGAAA+CGG | - | chr7_3:2347861-2347880 | Msa1089000:intron | 40.0% | |
| TGCAAATAGGCTCATAGGTT+TGG | + | chr7_3:2348542-2348561 | None:intergenic | 40.0% | |
| TATTTGCGGTTTATCCATCC+TGG | + | chr7_3:2349241-2349260 | None:intergenic | 40.0% | |
| !! | TTATCGCAAGAGCACTTCTA+TGG | - | chr7_3:2349655-2349674 | Msa1089000:intron | 40.0% |
| TCGACATAAGGACCTCTTTA+AGG | + | chr7_3:2350227-2350246 | None:intergenic | 40.0% | |
| ! | CATACTCCACAAGGACTTTT+GGG | + | chr7_3:2350264-2350283 | None:intergenic | 40.0% |
| ! | TCATACTCCACAAGGACTTT+TGG | + | chr7_3:2350265-2350284 | None:intergenic | 40.0% |
| TCCGTAGCTACACTTCATTT+AGG | - | chr7_3:2350361-2350380 | Msa1089000:intron | 40.0% | |
| GTTTAGTATATGGGAGCGAA+AGG | - | chr7_3:2350648-2350667 | Msa1089000:intron | 40.0% | |
| AAACCAAAGGTCAATGCCTT+TGG | + | chr7_3:2350706-2350725 | None:intergenic | 40.0% | |
| !! | AAAGGCATTGACCTTTGGTT+TGG | - | chr7_3:2350705-2350724 | Msa1089000:intron | 40.0% |
| !! | GCGTAGGGAATTCTTTGTTT+TGG | - | chr7_3:2350727-2350746 | Msa1089000:intron | 40.0% |
| !! | TTTTGGAGGAAGAAGACAGT+TGG | - | chr7_3:2350744-2350763 | Msa1089000:intron | 40.0% |
| TTTGGAGGAAGAAGACAGTT+GGG | - | chr7_3:2350745-2350764 | Msa1089000:intron | 40.0% | |
| CAATCAGTTATGGAAGAGCA+AGG | - | chr7_3:2350877-2350896 | Msa1089000:intron | 40.0% | |
| ATGATGAATCTGTCCAACAG+CGG | - | chr7_3:2350956-2350975 | Msa1089000:intron | 40.0% | |
| CAGTCCAACATATCTGATTG+AGG | + | chr7_3:2350989-2351008 | None:intergenic | 40.0% | |
| ! | GAGTTTTTGCATCCGTCATT+TGG | - | chr7_3:2351059-2351078 | Msa1089000:intron | 40.0% |
| AAAGCAAAAGACACAATGGC+GGG | + | chr7_3:2351115-2351134 | None:intergenic | 40.0% | |
| AGATGAATCCAAAGGGTTGA+TGG | - | chr7_3:2351271-2351290 | Msa1089000:intron | 40.0% | |
| !! | AACTATTTGGCTCGGTAAAC+AGG | - | chr7_3:2351338-2351357 | Msa1089000:intron | 40.0% |
| CAAGGAGATGTGAATTATGC+AGG | + | chr7_3:2351565-2351584 | None:intergenic | 40.0% | |
| ! | TACAAGTTGAGCAGCAGTAT+AGG | + | chr7_3:2351683-2351702 | None:intergenic | 40.0% |
| TAAAAGCAGGAGTTCTCTGA+GGG | + | chr7_3:2351707-2351726 | None:intergenic | 40.0% | |
| TTAAAAGCAGGAGTTCTCTG+AGG | + | chr7_3:2351708-2351727 | None:intergenic | 40.0% | |
| CATCAGTGTAAATTGAGCGA+GGG | + | chr7_3:2351965-2351984 | None:intergenic | 40.0% | |
| ACATCAGTGTAAATTGAGCG+AGG | + | chr7_3:2351966-2351985 | None:intergenic | 40.0% | |
| !! | TGTAGTATTAAGCTTTGGGG+AGG | - | chr7_3:2352017-2352036 | Msa1089000:intron | 40.0% |
| TTGCCTATGGCTTATTCAAG+TGG | - | chr7_3:2352178-2352197 | Msa1089000:intron | 40.0% | |
| ! | GTGGCTGATTAAAGCATCAA+TGG | - | chr7_3:2352197-2352216 | Msa1089000:intron | 40.0% |
| !! | TGCCTTGTTTATGTCTCTCT+GGG | - | chr7_3:2344827-2344846 | Msa1089000:three_prime_UTR | 40.0% |
| !!! | ATGCTTGTGCTTTTTCTTGC+TGG | - | chr7_3:2352297-2352316 | Msa1089000:intron | 40.0% |
| GGAGAAGTCAGAGACAATAA+TGG | - | chr7_3:2352318-2352337 | Msa1089000:intron | 40.0% | |
| GAAGTCAGAGACAATAATGG+AGG | - | chr7_3:2352321-2352340 | Msa1089000:intron | 40.0% | |
| GAGTAATGTGACTCAGAAAG+AGG | - | chr7_3:2352343-2352362 | Msa1089000:intron | 40.0% | |
| CAATCCCCCTATCTATTATC+AGG | - | chr7_3:2352763-2352782 | Msa1089000:intron | 40.0% | |
| ATCCCCCTATCTATTATCAG+GGG | - | chr7_3:2352765-2352784 | Msa1089000:intron | 40.0% | |
| !!! | TGAAGGTACTCCACTTTTGT+TGG | - | chr7_3:2352989-2353008 | Msa1089000:intron | 40.0% |
| ATTTCCATTTGATCCTGTGG+AGG | - | chr7_3:2345797-2345816 | Msa1089000:intron | 40.0% | |
| AAAACCTCCACAGGATCAAA+TGG | + | chr7_3:2353193-2353212 | None:intergenic | 40.0% | |
| GAAGACAACAGAGTAAGTCA+AGG | + | chr7_3:2345845-2345864 | None:intergenic | 40.0% | |
| TCATTCCTTGAGAAGTCTTG+AGG | + | chr7_3:2353321-2353340 | None:intergenic | 40.0% | |
| ! | AGGCGATTCGAATTTGGTTC+TGG | - | chr7_3:2343911-2343930 | Msa1089000:intron | 45.0% |
| !! | GGCGATTCGAATTTGGTTCT+GGG | - | chr7_3:2343912-2343931 | Msa1089000:intron | 45.0% |
| !! | GCGATTCGAATTTGGTTCTG+GGG | - | chr7_3:2343913-2343932 | Msa1089000:intron | 45.0% |
| GGCGAAAATGAAGCATGTGA+CGG | + | chr7_3:2344055-2344074 | None:intergenic | 45.0% | |
| GAGACGGAAAGTAAAGCTTG+AGG | + | chr7_3:2344076-2344095 | None:intergenic | 45.0% | |
| ACGGGAAGTAAAGCTTGAGA+CGG | + | chr7_3:2344201-2344220 | None:intergenic | 45.0% | |
| CGAACATAGTAAAGCTTGGG+CGG | + | chr7_3:2344257-2344276 | None:intergenic | 45.0% | |
| !! | GTGCCTTGTTTATGTCTCTC+TGG | - | chr7_3:2344826-2344845 | Msa1089000:three_prime_UTR | 45.0% |
| TGTGACTCAGAATGAGGTGA+AGG | - | chr7_3:2344927-2344946 | Msa1089000:three_prime_UTR | 45.0% | |
| GATTGATCCTCCGCATTAGT+CGG | + | chr7_3:2345333-2345352 | None:intergenic | 45.0% | |
| AGGGAATGATGTGAACCTCA+AGG | - | chr7_3:2345915-2345934 | Msa1089000:intron | 45.0% | |
| ATTTGGCGGTGCAAAGAACA+TGG | + | chr7_3:2347059-2347078 | None:intergenic | 45.0% | |
| GAAAAAACAAACGGTCCCTG+AGG | - | chr7_3:2347116-2347135 | Msa1089000:intron | 45.0% | |
| !! | TGTATTGGTTACCTAGTCCC+CGG | - | chr7_3:2347147-2347166 | Msa1089000:intron | 45.0% |
| AAGCAAGATACAGGTAACCG+GGG | + | chr7_3:2347167-2347186 | None:intergenic | 45.0% | |
| GATTGAAATCATTGGGGTGG+TGG | - | chr7_3:2347632-2347651 | Msa1089000:intron | 45.0% | |
| TTCTGCCCTTTGTTCTCAAG+TGG | + | chr7_3:2347860-2347879 | None:intergenic | 45.0% | |
| CACACTACATCACTCCAACT+GGG | + | chr7_3:2348517-2348536 | None:intergenic | 45.0% | |
| TGAGGGACCAAAAGTGAAGA+TGG | + | chr7_3:2348830-2348849 | None:intergenic | 45.0% | |
| AAGTGCTCTTGCGATAAGCA+CGG | + | chr7_3:2349652-2349671 | None:intergenic | 45.0% | |
| GAGTGTTAGGAGTAGGATCT+TGG | + | chr7_3:2349927-2349946 | None:intergenic | 45.0% | |
| GAAGCATGAGTGTTAGGAGT+AGG | + | chr7_3:2349934-2349953 | None:intergenic | 45.0% | |
| GACACTGAAGCATGAGTGTT+AGG | + | chr7_3:2349940-2349959 | None:intergenic | 45.0% | |
| CTATCTCGTGCGACAACAAA+AGG | - | chr7_3:2349985-2350004 | Msa1089000:intron | 45.0% | |
| TGTTTGTTTATGGGCTCACG+AGG | - | chr7_3:2350194-2350213 | Msa1089000:intron | 45.0% | |
| GTTGAACCCAAAAGTCCTTG+TGG | - | chr7_3:2350255-2350274 | Msa1089000:intron | 45.0% | |
| AGGAAAGGGGATGTGAATAC+AGG | - | chr7_3:2350421-2350440 | Msa1089000:intron | 45.0% | |
| GGAAAGGGGATGTGAATACA+GGG | - | chr7_3:2350422-2350441 | Msa1089000:intron | 45.0% | |
| !! | AAGGCTCTAAGCTGCGAAAA+TGG | - | chr7_3:2350489-2350508 | Msa1089000:intron | 45.0% |
| !! | AGGCTCTAAGCTGCGAAAAT+GGG | - | chr7_3:2350490-2350509 | Msa1089000:intron | 45.0% |
| ATAGTGTGGTTCGAGATGAG+AGG | - | chr7_3:2350671-2350690 | Msa1089000:intron | 45.0% | |
| TAGTGTGGTTCGAGATGAGA+GGG | - | chr7_3:2350672-2350691 | Msa1089000:intron | 45.0% | |
| !! | AAGCCAAAGGCATTGACCTT+TGG | - | chr7_3:2350700-2350719 | Msa1089000:intron | 45.0% |
| !! | ATTGACCTTTGGTTTGGCGT+AGG | - | chr7_3:2350711-2350730 | Msa1089000:intron | 45.0% |
| !! | TTGACCTTTGGTTTGGCGTA+GGG | - | chr7_3:2350712-2350731 | Msa1089000:intron | 45.0% |
| AATTCCCTACGCCAAACCAA+AGG | + | chr7_3:2350719-2350738 | None:intergenic | 45.0% | |
| TTGGAGGAAGAAGACAGTTG+GGG | - | chr7_3:2350746-2350765 | Msa1089000:intron | 45.0% | |
| TCCATTTCATCCTGTCAGAG+AGG | - | chr7_3:2350831-2350850 | Msa1089000:intron | 45.0% | |
| ACCTCTCTGACAGGATGAAA+TGG | + | chr7_3:2350835-2350854 | None:intergenic | 45.0% | |
| TTTCATCCTGTCAGAGAGGT+TGG | - | chr7_3:2350835-2350854 | Msa1089000:intron | 45.0% | |
| ! | GAGAACGCACAGACTTTTGA+AGG | + | chr7_3:2350905-2350924 | None:intergenic | 45.0% |
| CAAAAGTCTGTGCGTTCTCT+TGG | - | chr7_3:2350906-2350925 | Msa1089000:intron | 45.0% | |
| TGATGAATCTGTCCAACAGC+GGG | - | chr7_3:2350957-2350976 | Msa1089000:intron | 45.0% | |
| ATGTTGGACTGCATTCTGTG+CGG | - | chr7_3:2350998-2351017 | Msa1089000:intron | 45.0% | |
| AAGCAAAAGACACAATGGCG+GGG | + | chr7_3:2351114-2351133 | None:intergenic | 45.0% | |
| AGCAGTAAGAAGCTGTGTGA+TGG | - | chr7_3:2351151-2351170 | Msa1089000:intron | 45.0% | |
| ! | ATAAAAAGGGCATGGGGACT+TGG | + | chr7_3:2351297-2351316 | None:intergenic | 45.0% |
| ACCAAAAATGTGGCACAGCA+AGG | - | chr7_3:2351909-2351928 | Msa1089000:intron | 45.0% | |
| !! | TCCTTGCTGTGCCACATTTT+TGG | + | chr7_3:2351913-2351932 | None:intergenic | 45.0% |
| ! | AGCTCTTACCGGCAATTTTG+TGG | - | chr7_3:2352049-2352068 | Msa1089000:intron | 45.0% |
| TTGCGTAGACAAAGGTCACT+AGG | + | chr7_3:2352086-2352105 | None:intergenic | 45.0% | |
| GGAGACAATTGCGTAGACAA+AGG | + | chr7_3:2352094-2352113 | None:intergenic | 45.0% | |
| CAGCCACTTGAATAAGCCAT+AGG | + | chr7_3:2344757-2344776 | None:intergenic | 45.0% | |
| ! | CAAGGCACCATTGATGCTAA+AGG | + | chr7_3:2352241-2352260 | None:intergenic | 45.0% |
| !! | GTGCCTTGTTTATGTCTCTC+TGG | - | chr7_3:2344826-2344845 | Msa1089000:three_prime_UTR | 45.0% |
| AGCCCAGAGAGACATAAACA+AGG | + | chr7_3:2352259-2352278 | None:intergenic | 45.0% | |
| TTGTTTATGTCTCTCTGGGC+TGG | - | chr7_3:2352258-2352277 | Msa1089000:intron | 45.0% | |
| TCCCCCTATCTATTATCAGG+GGG | - | chr7_3:2352766-2352785 | Msa1089000:intron | 45.0% | |
| AGCCCCCTGATAATAGATAG+GGG | + | chr7_3:2352771-2352790 | None:intergenic | 45.0% | |
| GAGCCCCCTGATAATAGATA+GGG | + | chr7_3:2352772-2352791 | None:intergenic | 45.0% | |
| TGAGCCCCCTGATAATAGAT+AGG | + | chr7_3:2352773-2352792 | None:intergenic | 45.0% | |
| !!! | CAGGGGGCTCAATTTTAACT+TGG | - | chr7_3:2352782-2352801 | Msa1089000:intron | 45.0% |
| GTGAACCTCAAGACTTCTCA+AGG | - | chr7_3:2353313-2353332 | Msa1089000:intron | 45.0% | |
| !! | TTTAAAAAAAAAAAAATTTG+AGG | - | chr7_3:2344554-2344573 | Msa1089000:intron | 5.0% |
| !!! | TTTTGAATTAAAATAAAAAT+AGG | + | chr7_3:2344691-2344710 | None:intergenic | 5.0% |
| !! | TTAAAAAAAAAAAAAAAACT+CGG | + | chr7_3:2345115-2345134 | None:intergenic | 5.0% |
| !!! | TTAAAAAAATCTAATTTTTT+TGG | + | chr7_3:2348932-2348951 | None:intergenic | 5.0% |
| !!! | AAATTTAATATGAATTTTTA+CGG | - | chr7_3:2348960-2348979 | Msa1089000:intron | 5.0% |
| !!! | TAAAAAAATTTAATTTACTT+TGG | - | chr7_3:2349013-2349032 | Msa1089000:intron | 5.0% |
| !!! | AAAAAAATTTAATTTACTTT+GGG | - | chr7_3:2349014-2349033 | Msa1089000:intron | 5.0% |
| !!! | TAAATAAATAATTCTTTTTT+AGG | + | chr7_3:2349333-2349352 | None:intergenic | 5.0% |
| !! | AATTATATTTAAAAAAAACA+CGG | - | chr7_3:2349416-2349435 | Msa1089000:intron | 5.0% |
| TCGTGCTCGTGCCAGAAAAA+AGG | - | chr7_3:2343693-2343712 | Msa1089000:three_prime_UTR | 50.0% | |
| AGGCGAGTCAAATTGGGTTC+TGG | - | chr7_3:2343972-2343991 | Msa1089000:intron | 50.0% | |
| GGCGAGTCAAATTGGGTTCT+GGG | - | chr7_3:2343973-2343992 | Msa1089000:intron | 50.0% | |
| GCGAGTCAAATTGGGTTCTG+GGG | - | chr7_3:2343974-2343993 | Msa1089000:intron | 50.0% | |
| !! | TGGGTTCTGGGGAGTCAAAT+TGG | - | chr7_3:2343985-2344004 | Msa1089000:intron | 50.0% |
| !! | GGGTTCTGGGGAGTCAAATT+GGG | - | chr7_3:2343986-2344005 | Msa1089000:intron | 50.0% |
| TGGGGAGTCAAATTGGGTTC+TGG | - | chr7_3:2343992-2344011 | Msa1089000:intron | 50.0% | |
| GGGGAGTCAAATTGGGTTCT+GGG | - | chr7_3:2343993-2344012 | Msa1089000:intron | 50.0% | |
| GGGAGTCAAATTGGGTTCTG+GGG | - | chr7_3:2343994-2344013 | Msa1089000:intron | 50.0% | |
| GGCGGAAGATAAAGCTCAGA+CGG | + | chr7_3:2344239-2344258 | None:intergenic | 50.0% | |
| GACCCAAAGACCGACTAATG+CGG | - | chr7_3:2345320-2345339 | Msa1089000:intron | 50.0% | |
| CTCCGCATTAGTCGGTCTTT+GGG | + | chr7_3:2345325-2345344 | None:intergenic | 50.0% | |
| TCAATCCCACCGTCCATTAG+CGG | - | chr7_3:2345347-2345366 | Msa1089000:intron | 50.0% | |
| GTGAACCTCAAGGCTTCTCA+AGG | - | chr7_3:2345925-2345944 | Msa1089000:intron | 50.0% | |
| TCAGTCCTTGAGAAGCCTTG+AGG | + | chr7_3:2345933-2345952 | None:intergenic | 50.0% | |
| CCACACTACATCACTCCAAC+TGG | + | chr7_3:2348518-2348537 | None:intergenic | 50.0% | |
| CCAGTTGGAGTGATGTAGTG+TGG | - | chr7_3:2348515-2348534 | Msa1089000:intron | 50.0% | |
| AGTGCTCTTGCGATAAGCAC+GGG | + | chr7_3:2349651-2349670 | None:intergenic | 50.0% | |
| GTCAGCTAGTGTCTTGCTAG+TGG | - | chr7_3:2349741-2349760 | Msa1089000:intron | 50.0% | |
| AGTAGGATCTTGGAGCGAGA+GGG | + | chr7_3:2349917-2349936 | None:intergenic | 50.0% | |
| CGAGGAACGAGACCTTAAAG+AGG | - | chr7_3:2350212-2350231 | Msa1089000:intron | 50.0% | |
| CAACTCTCGCTGTCGACATA+AGG | + | chr7_3:2350239-2350258 | None:intergenic | 50.0% | |
| ! | GAGTTGGCTCATACTCCACA+AGG | + | chr7_3:2350273-2350292 | None:intergenic | 50.0% |
| CTCTAAGCTGCGAAAATGGG+CGG | - | chr7_3:2350493-2350512 | Msa1089000:intron | 50.0% | |
| GGAAGGGTCGACTAGGTTAA+CGG | - | chr7_3:2350518-2350537 | Msa1089000:intron | 50.0% | |
| ATGGGAGCGAAAGGATAGTG+TGG | - | chr7_3:2350657-2350676 | Msa1089000:intron | 50.0% | |
| AGGAAGAAGACAGTTGGGGT+TGG | - | chr7_3:2350750-2350769 | Msa1089000:intron | 50.0% | |
| GGAAGAAGACAGTTGGGGTT+GGG | - | chr7_3:2350751-2350770 | Msa1089000:intron | 50.0% | |
| ! | TGGGGTTGGGTGCCATAAAA+TGG | - | chr7_3:2350764-2350783 | Msa1089000:intron | 50.0% |
| ! | GGTTGGGTGCCATAAAATGG+TGG | - | chr7_3:2350767-2350786 | Msa1089000:intron | 50.0% |
| GATGAATCTGTCCAACAGCG+GGG | - | chr7_3:2350958-2350977 | Msa1089000:intron | 50.0% | |
| !! | TGCATCCGTCATTTGGTGTG+CGG | - | chr7_3:2351066-2351085 | Msa1089000:intron | 50.0% |
| TGTGGCACAGCAAGGAACTT+TGG | - | chr7_3:2351917-2351936 | Msa1089000:intron | 50.0% | |
| ! | GGCCTGTTTTCAGCTCTTAC+CGG | - | chr7_3:2352038-2352057 | Msa1089000:intron | 50.0% |
| TGCCGGTAAGAGCTGAAAAC+AGG | + | chr7_3:2352043-2352062 | None:intergenic | 50.0% | |
| GCCATTCTTGTGCCCATTCT+CGG | - | chr7_3:2352138-2352157 | Msa1089000:intron | 50.0% | |
| TCCGAGAATGGGCACAAGAA+TGG | + | chr7_3:2352142-2352161 | None:intergenic | 50.0% | |
| GCCCCCTGATAATAGATAGG+GGG | + | chr7_3:2352770-2352789 | None:intergenic | 50.0% | |
| !! | TTCTGGGGCTCACGTGATGT+TGG | - | chr7_3:2344009-2344028 | Msa1089000:intron | 55.0% |
| CCTCCGCATTAGTCGGTCTT+TGG | + | chr7_3:2345326-2345345 | None:intergenic | 55.0% | |
| CCAAAGACCGACTAATGCGG+AGG | - | chr7_3:2345323-2345342 | Msa1089000:intron | 55.0% | |
| CAATCCCACCGTCCATTAGC+GGG | - | chr7_3:2345348-2345367 | Msa1089000:intron | 55.0% | |
| AATCCCACCGTCCATTAGCG+GGG | - | chr7_3:2345349-2345368 | Msa1089000:intron | 55.0% | |
| TAATTGAGCCCCCCCGCTAA+TGG | + | chr7_3:2345363-2345382 | None:intergenic | 55.0% | |
| GATACAGGTAACCGGGGACT+AGG | + | chr7_3:2347161-2347180 | None:intergenic | 55.0% | |
| CTGCGCCCTTTGTTCTCAAG+TGG | + | chr7_3:2347825-2347844 | None:intergenic | 55.0% | |
| GAGTAGGATCTTGGAGCGAG+AGG | + | chr7_3:2349918-2349937 | None:intergenic | 55.0% | |
| TAGCGTCATAGCGATGCGAG+AGG | + | chr7_3:2349968-2349987 | None:intergenic | 55.0% | |
| AAGCTGCGAAAATGGGCGGA+TGG | - | chr7_3:2350497-2350516 | Msa1089000:intron | 55.0% | |
| TGCGAAAATGGGCGGATGGA+AGG | - | chr7_3:2350501-2350520 | Msa1089000:intron | 55.0% | |
| GCGAAAATGGGCGGATGGAA+GGG | - | chr7_3:2350502-2350521 | Msa1089000:intron | 55.0% | |
| CGAGGAAACCGCACACAAAG+TGG | + | chr7_3:2350625-2350644 | None:intergenic | 55.0% | |
| GTGGTTCGAGATGAGAGGGT+AGG | - | chr7_3:2350676-2350695 | Msa1089000:intron | 55.0% | |
| TGAGAGGGTAGGCAAGCCAA+AGG | - | chr7_3:2350687-2350706 | Msa1089000:intron | 55.0% | |
| !! | CCTGTCAGAGAGGTTGGCTT+CGG | - | chr7_3:2350841-2350860 | Msa1089000:intron | 55.0% |
| TTGAGGGATAACCCCGCTGT+TGG | + | chr7_3:2350972-2350991 | None:intergenic | 55.0% | |
| TGGACTGCATTCTGTGCGGA+TGG | - | chr7_3:2351002-2351021 | Msa1089000:intron | 55.0% | |
| GGACTGCATTCTGTGCGGAT+GGG | - | chr7_3:2351003-2351022 | Msa1089000:intron | 55.0% | |
| GGACACCGCACACCAAATGA+CGG | + | chr7_3:2351074-2351093 | None:intergenic | 55.0% | |
| !! | TCATTTGGTGTGCGGTGTCC+TGG | - | chr7_3:2351074-2351093 | Msa1089000:intron | 55.0% |
| GGGGTGACAAAGATCACACC+AGG | + | chr7_3:2351095-2351114 | None:intergenic | 55.0% | |
| GGACTTGGCCATCAACCCTT+TGG | + | chr7_3:2351282-2351301 | None:intergenic | 55.0% | |
| GCACAGCAAGGAACTTTGGC+AGG | - | chr7_3:2351921-2351940 | Msa1089000:intron | 55.0% | |
| CAGCAAGGAACTTTGGCAGG+CGG | - | chr7_3:2351924-2351943 | Msa1089000:intron | 55.0% | |
| ATCCCACCGTCCATTAGCGG+GGG | - | chr7_3:2345350-2345369 | Msa1089000:intron | 60.0% | |
| CCGAAGCCAACCTCTCTGAC+AGG | + | chr7_3:2350844-2350863 | None:intergenic | 60.0% | |
| CAAGGAACTTTGGCAGGCGG+CGG | - | chr7_3:2351927-2351946 | Msa1089000:intron | 60.0% | |
| GCACGACATAGCGACGCGAG+AGG | + | chr7_3:2343679-2343698 | None:intergenic | 65.0% | |
| TCCCACCGTCCATTAGCGGG+GGG | - | chr7_3:2345351-2345370 | Msa1089000:intron | 65.0% | |
| TGAGCCCCCCCGCTAATGGA+CGG | + | chr7_3:2345359-2345378 | None:intergenic | 65.0% | |
| GGCGGATGGAAGGGTCGACT+AGG | - | chr7_3:2350511-2350530 | Msa1089000:intron | 65.0% | |
| GCGACGCGAGAGGAGCGAGA+GGG | + | chr7_3:2343669-2343688 | None:intergenic | 70.0% | |
| AGCGACGCGAGAGGAGCGAG+AGG | + | chr7_3:2343670-2343689 | None:intergenic | 70.0% | |
| ! | CCCCCCCGCTAATGGACGGT+GGG | + | chr7_3:2345355-2345374 | None:intergenic | 70.0% |
| CCCACCGTCCATTAGCGGGG+GGG | - | chr7_3:2345352-2345371 | Msa1089000:intron | 70.0% | |
| GCGATAAGCACGGGCCCGTG+TGG | + | chr7_3:2349642-2349661 | None:intergenic | 70.0% | |
| ! | GCCCCCCCGCTAATGGACGG+TGG | + | chr7_3:2345356-2345375 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 2343597 | 2353568 | 2343597 | ID=Msa1089000;Name=Msa1089000 |
| chr7_3 | mRNA | 2343597 | 2353568 | 2343597 | ID=Msa1089000-mRNA-1;Parent=Msa1089000;Name=Msa1089000-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.25|0.4|0.6|0|0|5|544|81 |
| chr7_3 | exon | 2343597 | 2343906 | 2343597 | ID=Msa1089000-mRNA-1:exon:968;Parent=Msa1089000-mRNA-1 |
| chr7_3 | exon | 2344801 | 2345260 | 2344801 | ID=Msa1089000-mRNA-1:exon:967;Parent=Msa1089000-mRNA-1 |
| chr7_3 | exon | 2348689 | 2348694 | 2348689 | ID=Msa1089000-mRNA-1:exon:966;Parent=Msa1089000-mRNA-1 |
| chr7_3 | exon | 2351143 | 2351149 | 2351143 | ID=Msa1089000-mRNA-1:exon:965;Parent=Msa1089000-mRNA-1 |
| chr7_3 | exon | 2353562 | 2353568 | 2353562 | ID=Msa1089000-mRNA-1:exon:964;Parent=Msa1089000-mRNA-1 |
| chr7_3 | CDS | 2353562 | 2353568 | 2353562 | ID=Msa1089000-mRNA-1:cds;Parent=Msa1089000-mRNA-1 |
| chr7_3 | CDS | 2351143 | 2351149 | 2351143 | ID=Msa1089000-mRNA-1:cds;Parent=Msa1089000-mRNA-1 |
| chr7_3 | CDS | 2348689 | 2348694 | 2348689 | ID=Msa1089000-mRNA-1:cds;Parent=Msa1089000-mRNA-1 |
| chr7_3 | CDS | 2345035 | 2345260 | 2345035 | ID=Msa1089000-mRNA-1:cds;Parent=Msa1089000-mRNA-1 |
| chr7_3 | three_prime_UTR | 2344801 | 2345034 | 2344801 | ID=Msa1089000-mRNA-1:three_prime_utr;Parent=Msa1089000-mRNA-1 |
| chr7_3 | three_prime_UTR | 2343597 | 2343906 | 2343597 | ID=Msa1089000-mRNA-1:three_prime_utr;Parent=Msa1089000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
