AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0434920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0434920 MtrunA17_Chr3g0141721 99.265 272 2 0 1 272 1 272 0.0 550
Msa0434920 MtrunA17_Chr1g0155361 83.955 268 42 1 1 267 1 268 6.73e-171 473
Msa0434920 MtrunA17_Chr5g0404561 71.852 270 74 2 1 269 1 269 1.98e-142 400
Msa0434920 MtrunA17_Chr8g0386291 40.415 193 111 2 42 230 57 249 3.94e-41 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0434920 AT1G19580.1 80.297 269 52 1 1 268 1 269 1.71e-164 457
Msa0434920 AT1G47260.1 80.303 264 51 1 1 263 1 264 2.15e-163 454
Msa0434920 AT5G66510.1 67.176 262 77 3 1 261 1 254 3.75e-130 369
Msa0434920 AT5G66510.2 64.469 273 77 4 1 261 1 265 1.15e-126 361
Msa0434920 AT1G19580.2 80.447 179 34 1 1 178 1 179 9.34e-105 303
Msa0434920 AT5G63510.1 39.691 194 113 2 41 230 55 248 5.55e-42 144
Msa0434920 AT3G48680.1 38.660 194 115 2 41 230 59 252 6.14e-41 142
Msa0434920 AT5G63510.2 36.199 221 110 5 41 230 55 275 2.94e-36 130
Msa0434920 AT1G47420.1 55.814 86 24 2 1 85 1 73 4.83e-18 81.6

Find 101 sgRNAs with CRISPR-Local

Find 509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGAAGAGGGGTTTATTT+TGG 0.222500 3_2:+87945204 Msa0434920:three_prime_UTR
TGTGTTCTCCACTTTGGGTT+AGG 0.238845 3_2:+87945311 Msa0434920:three_prime_UTR
AAGTGTTGGCATTAGCAATT+AGG 0.272123 3_2:+87938858 Msa0434920:five_prime_UTR
TTGGAAAAGGGTCATCAATT+TGG 0.284605 3_2:+87939112 Msa0434920:CDS
AAGGTGTTGCCTACTATTAT+TGG 0.284723 3_2:+87940025 Msa0434920:CDS
TATGTACCCCGGTGGCATTT+AGG 0.296682 3_2:+87945513 Msa0434920:three_prime_UTR
TTATCAGGTAAGACATTATC+AGG 0.301201 3_2:-87945087 None:intergenic
AGGTGTTGCCTACTATTATT+GGG 0.302756 3_2:+87940026 Msa0434920:CDS
CAAACTGTGTTCTCCACTTT+GGG 0.310111 3_2:+87945306 Msa0434920:three_prime_UTR
GGAATTGATTGAAGAAGAAA+TGG 0.311067 3_2:+87938879 Msa0434920:exon
GTGTTCTCCACTTTGGGTTA+GGG 0.313928 3_2:+87945312 Msa0434920:three_prime_UTR
CTGTGCAAGGTTAGTATAAT+TGG 0.336529 3_2:-87944926 None:intergenic
CTCAAACTCAATTTCTTCAT+AGG 0.337084 3_2:-87944974 None:intergenic
CTCTATGTTGGGTGTTGTTC+GGG 0.337414 3_2:+87945041 Msa0434920:CDS
TATGGCTCCTTTCAAGTTCC+AGG 0.340667 3_2:+87945262 Msa0434920:three_prime_UTR
TTAAAATATGAGTTCTTAAG+AGG 0.347679 3_2:+87945124 Msa0434920:exon
TATTATGAGCAATCGCTTCC+TGG 0.360470 3_2:-87945280 None:intergenic
ATGTACCCCGGTGGCATTTA+GGG 0.367703 3_2:+87945514 Msa0434920:three_prime_UTR
GATGTTAACAGCATTAGAAT+TGG 0.385870 3_2:+87939941 Msa0434920:CDS
GGACAGTTGATTCGGAAAAC+TGG 0.385950 3_2:+87938931 Msa0434920:CDS
AAGACATCCTTATCAATAAC+AGG 0.391261 3_2:-87939051 None:intergenic
TAGTATAATTGGTGGCTGAC+TGG 0.391398 3_2:-87944915 None:intergenic
ACTCTATGTTGGGTGTTGTT+CGG 0.401232 3_2:+87945040 Msa0434920:CDS
TGATGAGATTATTATTAAAA+CGG 0.403560 3_2:+87945457 Msa0434920:three_prime_UTR
TCAAACTGTGTTCTCCACTT+TGG 0.403827 3_2:+87945305 Msa0434920:three_prime_UTR
GGTGATGTTCAGATTGGAAA+AGG 0.410207 3_2:+87939099 Msa0434920:CDS
CAAGGCTCCTGTTATTGATA+AGG 0.420602 3_2:+87939044 Msa0434920:CDS
GATGAGATTATTATTAAAAC+GGG 0.438359 3_2:+87945458 Msa0434920:three_prime_UTR
ATGGGTGCAATTCTGCTTGA+TGG 0.449196 3_2:+87940211 Msa0434920:CDS
ACAGCGTTGGACAGTTGATT+CGG 0.455958 3_2:+87938923 Msa0434920:CDS
ACATTATCCCCAATAATAGT+AGG 0.462118 3_2:-87940034 None:intergenic
TTCTTTCAAATTCATGGAAG+AGG 0.464818 3_2:+87945192 Msa0434920:three_prime_UTR
ACTCTAGCCTAGAAAACGTT+TGG 0.471680 3_2:-87945239 None:intergenic
GTTGCAAAGTCAAATTTAAG+TGG 0.474043 3_2:+87940001 Msa0434920:CDS
TTCCAATCTTGAAAACATCA+AGG 0.477826 3_2:+87945159 Msa0434920:three_prime_UTR
CGCTGTATATTGCTCTTCCG+AGG 0.481527 3_2:-87938906 None:intergenic
TGTTCTCCACTTTGGGTTAG+GGG 0.488974 3_2:+87945313 Msa0434920:three_prime_UTR
AGTATAATTGGTGGCTGACT+GGG 0.491691 3_2:-87944914 None:intergenic
GTCATTGGTGATGTTCAGAT+TGG 0.496337 3_2:+87939093 Msa0434920:CDS
GCACCAAGTGCAGCTGTCAT+TGG 0.497004 3_2:+87939078 Msa0434920:CDS
TCTTTCAAATTCATGGAAGA+GGG 0.500630 3_2:+87945193 Msa0434920:three_prime_UTR
TTGACTTTGCAACATGCACC+AGG 0.501255 3_2:-87939991 None:intergenic
CAGAATACAAAGATTCCATC+TGG 0.505231 3_2:+87940283 Msa0434920:CDS
ACATCGAAGAACAGCTCTCT+AGG 0.510020 3_2:+87938995 Msa0434920:CDS
CACCCACCCTAAATGCCACC+GGG 0.511292 3_2:-87945520 None:intergenic
AGCTTTCTTAGAAACTTCGC+TGG 0.514816 3_2:-87944865 None:intergenic
GAATTGATTGAAGAAGAAAT+GGG 0.516070 3_2:+87938880 Msa0434920:exon
AAAGGGTCATCAATTTGGTA+TGG 0.518770 3_2:+87939117 Msa0434920:CDS
AACAGCATTAGAATTGGAAG+TGG 0.524202 3_2:+87939947 Msa0434920:CDS
GTTCTCCACTTTGGGTTAGG+GGG 0.528626 3_2:+87945314 Msa0434920:three_prime_UTR
TCTTTGTATTCTGCCTCACA+AGG 0.530496 3_2:-87940273 None:intergenic
CATCAGAGACTGAGAGGTCG+AGG 0.534656 3_2:-87938811 None:intergenic
TCACCCACCCTAAATGCCAC+CGG 0.539298 3_2:-87945521 None:intergenic
GATAAAAGCTATCTCTTCAT+CGG 0.540749 3_2:-87944890 None:intergenic
AAAGTCAAATTTAAGTGGGA+AGG 0.542666 3_2:+87940006 Msa0434920:CDS
TTTACATGGTTGCACTGTTG+AGG 0.545648 3_2:+87940171 Msa0434920:CDS
CAGCTGCATGGACCTGTGCA+AGG 0.546560 3_2:-87944939 None:intergenic
TGAGGAGTATGACTCTATGT+TGG 0.550229 3_2:+87945029 Msa0434920:CDS
TCCAATCTTGAAAACATCAA+GGG 0.550631 3_2:+87945160 Msa0434920:three_prime_UTR
TGGTTGCACTGTTGAGGATG+AGG 0.551311 3_2:+87940177 Msa0434920:CDS
TTGCAAAGTCAAATTTAAGT+GGG 0.554283 3_2:+87940002 Msa0434920:CDS
GTGATGTTCAGATTGGAAAA+GGG 0.560739 3_2:+87939100 Msa0434920:CDS
GAAGAAGAAATGGGAACCCT+CGG 0.561046 3_2:+87938889 Msa0434920:exon
ATCGCTTCCTGGAACTTGAA+AGG 0.562878 3_2:-87945269 None:intergenic
TTGCTGCTGGAGCCCTTGTG+AGG 0.564784 3_2:+87940260 Msa0434920:CDS
TCAGGAAGAATAAGCTCTGG+TGG 0.566098 3_2:-87945069 None:intergenic
TCACCAATGACAGCTGCACT+TGG 0.572379 3_2:-87939081 None:intergenic
TGGAAGTGGAACTAACCTAC+AGG 0.572989 3_2:+87939961 Msa0434920:CDS
TGAAGAAATTGAGTTTGAGA+AGG 0.573566 3_2:+87944978 Msa0434920:CDS
CGCCTCGGTTCTCATCTCCA+AGG 0.576532 3_2:+87938967 Msa0434920:CDS
GTTCTTCGATGTAGCCACCT+TGG 0.576656 3_2:-87938984 None:intergenic
CTGAGAGGTCGAGGTAGACG+TGG 0.577266 3_2:-87938802 None:intergenic
CTTTCAAATTCATGGAAGAG+GGG 0.577553 3_2:+87945194 Msa0434920:three_prime_UTR
ATTAGACATACCTCGCCAGA+TGG 0.581701 3_2:-87940298 None:intergenic
GAGGAGTATGACTCTATGTT+GGG 0.583365 3_2:+87945030 Msa0434920:CDS
GGTCAAGCCGTTGATCGCCT+CGG 0.584423 3_2:+87938952 Msa0434920:CDS
GCTGTATATTGCTCTTCCGA+GGG 0.586697 3_2:-87938905 None:intergenic
TTATCAGGAAGAATAAGCTC+TGG 0.587187 3_2:-87945072 None:intergenic
ATTGGGGATAATGTTACCGT+AGG 0.589866 3_2:+87940043 Msa0434920:CDS
ATGAGAACCGAGGCGATCAA+CGG 0.590186 3_2:-87938959 None:intergenic
TTGAGTGTGGATATGTACCC+CGG 0.592255 3_2:+87945502 Msa0434920:three_prime_UTR
TGGTATGGATCTGTATTGAG+AGG 0.599692 3_2:+87939132 Msa0434920:CDS
GAAGTATGCAACTAAAGATG+AGG 0.603345 3_2:+87945011 Msa0434920:CDS
CAATTATACTAACCTTGCAC+AGG 0.606999 3_2:+87944927 Msa0434920:CDS
GGAAGAGCAATATACAGCGT+TGG 0.610305 3_2:+87938910 Msa0434920:CDS
TAACCTACAGGATAACTCCC+TGG 0.618045 3_2:+87939973 Msa0434920:CDS
TACCCTCCTCTGAATGAAAG+GGG 0.626071 3_2:+87938769 None:intergenic
TGCAAGGTTAGTATAATTGG+TGG 0.628820 3_2:-87944923 None:intergenic
CCAATCTTGAAAACATCAAG+GGG 0.630148 3_2:+87945161 Msa0434920:three_prime_UTR
TACAAAGATTCCATCTGGCG+AGG 0.640116 3_2:+87940288 Msa0434920:CDS
GGTGTTGCCTACTATTATTG+GGG 0.645236 3_2:+87940027 Msa0434920:CDS
CTTGAGCATCAGAGACTGAG+AGG 0.647116 3_2:-87938817 None:intergenic
CTCGGTTCTCATCTCCAAGG+TGG 0.666923 3_2:+87938970 Msa0434920:CDS
CTTTGTATTCTGCCTCACAA+GGG 0.673013 3_2:-87940272 None:intergenic
TATCTTGAACATATTTGACA+AGG 0.679511 3_2:+87939026 Msa0434920:CDS
TGACTTTGCAACATGCACCA+GGG 0.689090 3_2:-87939990 None:intergenic
CACCTTGGAGATGAGAACCG+AGG 0.703858 3_2:-87938969 None:intergenic
GCACCAGGGAGTTATCCTGT+AGG 0.704606 3_2:-87939976 None:intergenic
ATGAGATTATTATTAAAACG+GGG 0.719211 3_2:+87945459 Msa0434920:three_prime_UTR
ACCCACCCTAAATGCCACCG+GGG 0.752695 3_2:-87945519 None:intergenic
AGTGTGGATATGTACCCCGG+TGG 0.809671 3_2:+87945505 Msa0434920:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACCAAATTTAAAAAAAA+GGG - chr3_2:87939437-87939456 None:intergenic 10.0%
!! TATTACCAAATTTAAAAAAA+AGG - chr3_2:87939438-87939457 None:intergenic 10.0%
!!! AATTTTAAGAAAAAAAACAA+CGG - chr3_2:87941061-87941080 None:intergenic 10.0%
!! TATAAAAATTCAAATGATAA+AGG + chr3_2:87942599-87942618 Msa0434920:intron 10.0%
!! TTTAACAAAATTAAAAATAG+GGG + chr3_2:87943692-87943711 Msa0434920:intron 10.0%
!! GATATGAATTTCTAAATATT+TGG + chr3_2:87939179-87939198 Msa0434920:intron 15.0%
!!! ATTACCCTTTTTTTTAAATT+TGG + chr3_2:87939430-87939449 Msa0434920:intron 15.0%
!! TATATGAAAATATGTGTTAT+AGG + chr3_2:87939553-87939572 Msa0434920:intron 15.0%
!!! TTTATTCTATCTTTTGTTAT+AGG + chr3_2:87939625-87939644 Msa0434920:intron 15.0%
!!! TAGTTACTTAAGATAATTTT+AGG + chr3_2:87940910-87940929 Msa0434920:intron 15.0%
!!! AAATCTCTCATTTTAAAATT+GGG - chr3_2:87941354-87941373 None:intergenic 15.0%
!!! AAAATCTCTCATTTTAAAAT+TGG - chr3_2:87941355-87941374 None:intergenic 15.0%
!! AAGCCTAAATTTATTATTAT+AGG + chr3_2:87942410-87942429 Msa0434920:intron 15.0%
!! TGTCCTATAATAATAAATTT+AGG - chr3_2:87942416-87942435 None:intergenic 15.0%
!! TATATATTATATTAAAGCCA+TGG - chr3_2:87942441-87942460 None:intergenic 15.0%
!!! TATTATTTTATAATGGTTGT+TGG + chr3_2:87942556-87942575 Msa0434920:intron 15.0%
!!! ATTATTTTATAATGGTTGTT+GGG + chr3_2:87942557-87942576 Msa0434920:intron 15.0%
!! AAATAAAAAGAAAGATACAA+AGG - chr3_2:87943073-87943092 None:intergenic 15.0%
!! AGTTAACAAAATTGAAAATA+GGG - chr3_2:87943220-87943239 None:intergenic 15.0%
!! AAGTTAACAAAATTGAAAAT+AGG - chr3_2:87943221-87943240 None:intergenic 15.0%
!!! AAAAGTCAAAGAAATTTTTT+TGG + chr3_2:87943286-87943305 Msa0434920:intron 15.0%
!!! ATATTTTTAAATTAATGGCA+TGG - chr3_2:87943405-87943424 None:intergenic 15.0%
!! TTAACAAAATTAAAAATAGG+GGG + chr3_2:87943693-87943712 Msa0434920:intron 15.0%
!!! TTTTTTTTCTTTCAAATTCA+TGG + chr3_2:87945186-87945205 Msa0434920:three_prime_UTR 15.0%
!! TGATGAGATTATTATTAAAA+CGG + chr3_2:87945457-87945476 Msa0434920:three_prime_UTR 15.0%
!! AATCAAATAATTGGTATGTT+TGG + chr3_2:87939225-87939244 Msa0434920:intron 20.0%
!!! AGTATAAGTGTATTTTCATA+AGG - chr3_2:87939364-87939383 None:intergenic 20.0%
!! TAAACACATGATAATTTGAA+AGG - chr3_2:87939411-87939430 None:intergenic 20.0%
!! TGTTATAGGATCTTATAATT+AGG + chr3_2:87939567-87939586 Msa0434920:intron 20.0%
!! GTTATAGGATCTTATAATTA+GGG + chr3_2:87939568-87939587 Msa0434920:intron 20.0%
!!! ATTTTGAAACAATGTTTTCA+TGG + chr3_2:87939791-87939810 Msa0434920:intron 20.0%
!!! TTTTGAAACAATGTTTTCAT+GGG + chr3_2:87939792-87939811 Msa0434920:intron 20.0%
!! CTATACTTAATAATTACATG+CGG + chr3_2:87939877-87939896 Msa0434920:intron 20.0%
!!! ATTCTGTTTTGTATAGTTTA+TGG + chr3_2:87940806-87940825 Msa0434920:intron 20.0%
!!! TTAGTTACTTAGATAGTTTT+AGG + chr3_2:87940861-87940880 Msa0434920:intron 20.0%
!! AAAAATATAAGAAGATTGTC+GGG - chr3_2:87941002-87941021 None:intergenic 20.0%
!! CAAAAATATAAGAAGATTGT+CGG - chr3_2:87941003-87941022 None:intergenic 20.0%
!! AATTTATCATATCTCTAAGT+TGG - chr3_2:87941278-87941297 None:intergenic 20.0%
!!! AATCTCTCATTTTAAAATTG+GGG - chr3_2:87941353-87941372 None:intergenic 20.0%
!!! TAGAAACTTTGAAAATAAGT+GGG - chr3_2:87941861-87941880 None:intergenic 20.0%
!! TAGCATAAAAAGAAAAATTG+AGG - chr3_2:87941997-87942016 None:intergenic 20.0%
!!! TTAAATGTTAATTTTCACGT+TGG + chr3_2:87942183-87942202 Msa0434920:intron 20.0%
!!! GAAGTGCTATTATTTTATAA+TGG + chr3_2:87942549-87942568 Msa0434920:intron 20.0%
!!! TTATTTTATAATGGTTGTTG+GGG + chr3_2:87942558-87942577 Msa0434920:intron 20.0%
!! CAAATGATAAAGGTAAAATA+TGG + chr3_2:87942609-87942628 Msa0434920:intron 20.0%
!! TGGAAAAGATCTAATAAATA+TGG + chr3_2:87942852-87942871 Msa0434920:intron 20.0%
!! TTAACAAAATTGAAAATAGG+GGG - chr3_2:87943218-87943237 None:intergenic 20.0%
!! GTTAACAAAATTGAAAATAG+GGG - chr3_2:87943219-87943238 None:intergenic 20.0%
!!! AAAGTTGGTTTTAGAAATAT+GGG - chr3_2:87943250-87943269 None:intergenic 20.0%
!!! AAAAGTTGGTTTTAGAAATA+TGG - chr3_2:87943251-87943270 None:intergenic 20.0%
!!! TATTTCTAAAACCAACTTTT+TGG + chr3_2:87943251-87943270 Msa0434920:intron 20.0%
!!! TCTTTGACTTTTTAAATAGA+GGG - chr3_2:87943278-87943297 None:intergenic 20.0%
!!! TTCTTTGACTTTTTAAATAG+AGG - chr3_2:87943279-87943298 None:intergenic 20.0%
!!! GACTTTTTGTTTTAAACATA+AGG - chr3_2:87943737-87943756 None:intergenic 20.0%
!! AAAGCTATATTATGTACTAT+TGG + chr3_2:87944661-87944680 Msa0434920:intron 20.0%
!!! TTTTTTTTTTTTGTTGGTCT+AGG + chr3_2:87944727-87944746 Msa0434920:intron 20.0%
!! TTAAAATATGAGTTCTTAAG+AGG + chr3_2:87945124-87945143 Msa0434920:exon 20.0%
!! GATGAGATTATTATTAAAAC+GGG + chr3_2:87945458-87945477 Msa0434920:three_prime_UTR 20.0%
!! ATGAGATTATTATTAAAACG+GGG + chr3_2:87945459-87945478 Msa0434920:three_prime_UTR 20.0%
! GAATTGATTGAAGAAGAAAT+GGG + chr3_2:87938880-87938899 Msa0434920:exon 25.0%
! TATCTTGAACATATTTGACA+AGG + chr3_2:87939026-87939045 Msa0434920:CDS 25.0%
!! TGCTTTTGCAATCAAATAAT+TGG + chr3_2:87939216-87939235 Msa0434920:intron 25.0%
!! TGAAAGGAGTCTTATAATTA+GGG - chr3_2:87939395-87939414 None:intergenic 25.0%
!! TTGAAAGGAGTCTTATAATT+AGG - chr3_2:87939396-87939415 None:intergenic 25.0%
! CATATTTGAACTTGACATTA+TGG + chr3_2:87939912-87939931 Msa0434920:intron 25.0%
! TTGCAAAGTCAAATTTAAGT+GGG + chr3_2:87940002-87940021 Msa0434920:CDS 25.0%
! TAAGAATAAGCTTGCAAAAT+AGG + chr3_2:87940659-87940678 Msa0434920:intron 25.0%
! TTTATGTTGCAGAAAATTCT+TGG - chr3_2:87941029-87941048 None:intergenic 25.0%
!!! ACAGTAAACAAAATTTGTTG+TGG - chr3_2:87941184-87941203 None:intergenic 25.0%
!! TGTCATATCTGTATTTTCTA+GGG - chr3_2:87941236-87941255 None:intergenic 25.0%
!! TTTAGACTTAATTGCACTTT+TGG + chr3_2:87941297-87941316 Msa0434920:intron 25.0%
!! TTAGACTTAATTGCACTTTT+GGG + chr3_2:87941298-87941317 Msa0434920:intron 25.0%
! TTAAATGTTAATTCCCATGT+TGG - chr3_2:87941485-87941504 None:intergenic 25.0%
! TAAAATTAGAAGGGTAAGAA+GGG - chr3_2:87941573-87941592 None:intergenic 25.0%
! GAAAAATAACACTAGAATGT+GGG - chr3_2:87941665-87941684 None:intergenic 25.0%
! AGAAAAATAACACTAGAATG+TGG - chr3_2:87941666-87941685 None:intergenic 25.0%
!! CTAGAAACTTTGAAAATAAG+TGG - chr3_2:87941862-87941881 None:intergenic 25.0%
!! TTCTAGTAGTATTTTGTTAG+AGG + chr3_2:87941876-87941895 Msa0434920:intron 25.0%
! CAATTCATTTGAATTTGCAT+CGG + chr3_2:87941964-87941983 Msa0434920:intron 25.0%
! GAAGCATAGAAAATTCAAAA+CGG - chr3_2:87942707-87942726 None:intergenic 25.0%
! GATTTGGATCTATTTAAGAA+AGG - chr3_2:87942745-87942764 None:intergenic 25.0%
!!! GATTTCTATGTTTTTTCTGT+TGG + chr3_2:87942832-87942851 Msa0434920:intron 25.0%
! AAAGGGATAAAATCTTTCAA+GGG - chr3_2:87942961-87942980 None:intergenic 25.0%
!! TTGAAAGATTTTATCCCTTT+GGG + chr3_2:87942961-87942980 Msa0434920:intron 25.0%
! AGTTTATAGATGACAACTAA+GGG + chr3_2:87943116-87943135 Msa0434920:intron 25.0%
!!! TATTTCTAGAACCAACATTT+TGG - chr3_2:87943660-87943679 None:intergenic 25.0%
!!! AAAATGTTGGTTCTAGAAAT+AGG + chr3_2:87943659-87943678 Msa0434920:intron 25.0%
!!! AAATGTTGGTTCTAGAAATA+GGG + chr3_2:87943660-87943679 Msa0434920:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr3_2:87944018-87944037 Msa0434920:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr3_2:87944058-87944077 None:intergenic 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + chr3_2:87944065-87944084 Msa0434920:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr3_2:87944200-87944219 None:intergenic 25.0%
! TTAACCTTCTATAACAGTAT+TGG + chr3_2:87944535-87944554 Msa0434920:intron 25.0%
! AAATCCAATACTGTTATAGA+AGG - chr3_2:87944542-87944561 None:intergenic 25.0%
!! CGATTTTATTGTCAATTATG+AGG + chr3_2:87944582-87944601 Msa0434920:intron 25.0%
! AACATTAGAACTTTACTATC+TGG - chr3_2:87944760-87944779 None:intergenic 25.0%
!! GTAAAGTTCTAATGTTTGTT+TGG + chr3_2:87944764-87944783 Msa0434920:intron 25.0%
! AAACAAACCTGAAAAAGTGT+TGG + chr3_2:87938844-87938863 Msa0434920:five_prime_UTR 30.0%
GGAATTGATTGAAGAAGAAA+TGG + chr3_2:87938879-87938898 Msa0434920:exon 30.0%
AAGACATCCTTATCAATAAC+AGG - chr3_2:87939054-87939073 None:intergenic 30.0%
! CTAGAGAGCATATAGAAATA+AGG - chr3_2:87939337-87939356 None:intergenic 30.0%
!! CTTATTTCTATATGCTCTCT+AGG + chr3_2:87939335-87939354 Msa0434920:intron 30.0%
TAGGATCTTATAATTAGGGA+CGG + chr3_2:87939572-87939591 Msa0434920:intron 30.0%
TCAAGTTCAAATATGATTGC+CGG - chr3_2:87939907-87939926 None:intergenic 30.0%
TTGAACTTGACATTATGGAT+AGG + chr3_2:87939917-87939936 Msa0434920:intron 30.0%
GATGTTAACAGCATTAGAAT+TGG + chr3_2:87939941-87939960 Msa0434920:CDS 30.0%
GTTGCAAAGTCAAATTTAAG+TGG + chr3_2:87940001-87940020 Msa0434920:CDS 30.0%
AAAGTCAAATTTAAGTGGGA+AGG + chr3_2:87940006-87940025 Msa0434920:CDS 30.0%
ACATTATCCCCAATAATAGT+AGG - chr3_2:87940037-87940056 None:intergenic 30.0%
TGTATAAAATTTCACTGAGC+AGG + chr3_2:87940136-87940155 Msa0434920:intron 30.0%
CAATCCTAAATCTCATTAAG+TGG - chr3_2:87940345-87940364 None:intergenic 30.0%
! ATGAGATTTAGGATTGTGTA+CGG + chr3_2:87940349-87940368 Msa0434920:intron 30.0%
! CTTCTATTCTTTGATAACTC+CGG - chr3_2:87940443-87940462 None:intergenic 30.0%
TAGCAACTATAAGACAGAAT+AGG - chr3_2:87941093-87941112 None:intergenic 30.0%
! GTCATATCTGTATTTTCTAG+GGG - chr3_2:87941235-87941254 None:intergenic 30.0%
! CTGTCATATCTGTATTTTCT+AGG - chr3_2:87941237-87941256 None:intergenic 30.0%
GTAAAATTAGAAGGGTAAGA+AGG - chr3_2:87941574-87941593 None:intergenic 30.0%
TCCATTGGGTAAAATTAGAA+GGG - chr3_2:87941582-87941601 None:intergenic 30.0%
TTCCATTGGGTAAAATTAGA+AGG - chr3_2:87941583-87941602 None:intergenic 30.0%
! TTTTCTGTCAACATACTCAT+TGG + chr3_2:87941680-87941699 Msa0434920:intron 30.0%
CGATGCAAATTCAAATGAAT+TGG - chr3_2:87941966-87941985 None:intergenic 30.0%
! TAACTAAATCGCTATTGACT+TGG + chr3_2:87942015-87942034 Msa0434920:intron 30.0%
!! AACTAAATCGCTATTGACTT+GGG + chr3_2:87942016-87942035 Msa0434920:intron 30.0%
TGAAATTAGAAGGGTAAGAA+GGG + chr3_2:87942079-87942098 Msa0434920:intron 30.0%
!!! TTTTTTGGTCAAAATGTGCA+TGG + chr3_2:87942244-87942263 Msa0434920:intron 30.0%
!! TTTTTGGTCAAAATGTGCAT+GGG + chr3_2:87942245-87942264 Msa0434920:intron 30.0%
! AAAACCGCTCATTTTAAACT+TGG + chr3_2:87942304-87942323 Msa0434920:intron 30.0%
!!! GTTTTAGAATTGTGCGATTT+TGG - chr3_2:87942333-87942352 None:intergenic 30.0%
!! AATCGCACAATTCTAAAACT+TGG + chr3_2:87942334-87942353 Msa0434920:intron 30.0%
!! ATCGCACAATTCTAAAACTT+GGG + chr3_2:87942335-87942354 Msa0434920:intron 30.0%
AATCGCACAAATGTTAAACT+TGG + chr3_2:87942369-87942388 Msa0434920:intron 30.0%
ATCGCACAAATGTTAAACTT+GGG + chr3_2:87942370-87942389 Msa0434920:intron 30.0%
TATTATTATAGGACATGCCA+TGG + chr3_2:87942421-87942440 Msa0434920:intron 30.0%
AGAAAGGTGAAGATTTAACA+AGG - chr3_2:87942729-87942748 None:intergenic 30.0%
TCTTAAATAGATCCAAATCC+AGG + chr3_2:87942746-87942765 Msa0434920:intron 30.0%
ATGGATGATGATCTTTATCA+AGG + chr3_2:87942891-87942910 Msa0434920:intron 30.0%
CAAAGGGATAAAATCTTTCA+AGG - chr3_2:87942962-87942981 None:intergenic 30.0%
! CTTGAAAGATTTTATCCCTT+TGG + chr3_2:87942960-87942979 Msa0434920:intron 30.0%
TTGTCAGAAAAAAACCCAAA+GGG - chr3_2:87942978-87942997 None:intergenic 30.0%
! TTCTGACAAGGTTTTTAATG+AGG + chr3_2:87942989-87943008 Msa0434920:intron 30.0%
CAGTTTATAGATGACAACTA+AGG + chr3_2:87943115-87943134 Msa0434920:intron 30.0%
GTTTATAGATGACAACTAAG+GGG + chr3_2:87943117-87943136 Msa0434920:intron 30.0%
TTAATGATATGAATCCTACG+TGG + chr3_2:87943342-87943361 Msa0434920:intron 30.0%
! AAAAAGTCAGCGGAAATTTT+TGG - chr3_2:87943627-87943646 None:intergenic 30.0%
!!! TTTCCGCTGACTTTTTAAAT+AGG + chr3_2:87943631-87943650 Msa0434920:intron 30.0%
!!! TTCCGCTGACTTTTTAAATA+GGG + chr3_2:87943632-87943651 Msa0434920:intron 30.0%
!! AATGTTGGTTCTAGAAATAG+GGG + chr3_2:87943661-87943680 Msa0434920:intron 30.0%
TGTTGTTGTACTGTTATAGA+AGG - chr3_2:87943936-87943955 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG - chr3_2:87944014-87944033 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr3_2:87944053-87944072 Msa0434920:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr3_2:87944075-87944094 Msa0434920:intron 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - chr3_2:87944133-87944152 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG + chr3_2:87944134-87944153 Msa0434920:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr3_2:87944204-87944223 Msa0434920:intron 30.0%
AATTCCATGACAACATTCAA+AGG - chr3_2:87944612-87944631 None:intergenic 30.0%
TTGTCATGGAATTTATCACA+TGG + chr3_2:87944619-87944638 Msa0434920:intron 30.0%
!! ATAGCTTTAGTCTAGCAATT+GGG - chr3_2:87944649-87944668 None:intergenic 30.0%
!! TATAGCTTTAGTCTAGCAAT+TGG - chr3_2:87944650-87944669 None:intergenic 30.0%
! TGTAAACTTGCATATTTTGC+AGG + chr3_2:87944828-87944847 Msa0434920:intron 30.0%
GATAAAAGCTATCTCTTCAT+CGG - chr3_2:87944893-87944912 None:intergenic 30.0%
CTCAAACTCAATTTCTTCAT+AGG - chr3_2:87944977-87944996 None:intergenic 30.0%
TGAAGAAATTGAGTTTGAGA+AGG + chr3_2:87944978-87944997 Msa0434920:CDS 30.0%
TTATCAGGTAAGACATTATC+AGG - chr3_2:87945090-87945109 None:intergenic 30.0%
!!! AGAGCTTTTTTTGCTTTATC+AGG - chr3_2:87945105-87945124 None:intergenic 30.0%
TTCCAATCTTGAAAACATCA+AGG + chr3_2:87945159-87945178 Msa0434920:three_prime_UTR 30.0%
TCCAATCTTGAAAACATCAA+GGG + chr3_2:87945160-87945179 Msa0434920:three_prime_UTR 30.0%
TTCTTTCAAATTCATGGAAG+AGG + chr3_2:87945192-87945211 Msa0434920:three_prime_UTR 30.0%
TCTTTCAAATTCATGGAAGA+GGG + chr3_2:87945193-87945212 Msa0434920:three_prime_UTR 30.0%
! AATAACACCAAACGTTTTCT+AGG + chr3_2:87945232-87945251 Msa0434920:three_prime_UTR 30.0%
!! AAGTGTTGGCATTAGCAATT+AGG + chr3_2:87938858-87938877 Msa0434920:five_prime_UTR 35.0%
GTGATGTTCAGATTGGAAAA+GGG + chr3_2:87939100-87939119 Msa0434920:CDS 35.0%
TTGGAAAAGGGTCATCAATT+TGG + chr3_2:87939112-87939131 Msa0434920:CDS 35.0%
AAAGGGTCATCAATTTGGTA+TGG + chr3_2:87939117-87939136 Msa0434920:CDS 35.0%
! CAGGGTCTTATAAATAAGGA+CGG + chr3_2:87939526-87939545 Msa0434920:intron 35.0%
AATAATTACATGCGGCAAAC+CGG + chr3_2:87939885-87939904 Msa0434920:intron 35.0%
AACAGCATTAGAATTGGAAG+TGG + chr3_2:87939947-87939966 Msa0434920:CDS 35.0%
!! AAGGTGTTGCCTACTATTAT+TGG + chr3_2:87940025-87940044 Msa0434920:CDS 35.0%
! AGGTGTTGCCTACTATTATT+GGG + chr3_2:87940026-87940045 Msa0434920:CDS 35.0%
AATTGTTGATCGTGGCAAAA+AGG - chr3_2:87940076-87940095 None:intergenic 35.0%
ATGTAGCAAATTGTTGATCG+TGG - chr3_2:87940084-87940103 None:intergenic 35.0%
CAGAATACAAAGATTCCATC+TGG + chr3_2:87940283-87940302 Msa0434920:CDS 35.0%
TAATTTGGCTGTAAACTGTC+TGG + chr3_2:87940317-87940336 Msa0434920:intron 35.0%
GGTACCACTTAATGAGATTT+AGG + chr3_2:87940338-87940357 Msa0434920:intron 35.0%
AGAAAGAAAGCAGATAGAGA+TGG + chr3_2:87940467-87940486 Msa0434920:intron 35.0%
TACGAGATAGAGAATGATGA+TGG + chr3_2:87940519-87940538 Msa0434920:intron 35.0%
ACGAGATAGAGAATGATGAT+GGG + chr3_2:87940520-87940539 Msa0434920:intron 35.0%
AACTGTTTGACAGTTGTGAA+AGG - chr3_2:87940584-87940603 None:intergenic 35.0%
TTGCAAGCTTATTCTTACGA+GGG - chr3_2:87940656-87940675 None:intergenic 35.0%
TTTGCAAGCTTATTCTTACG+AGG - chr3_2:87940657-87940676 None:intergenic 35.0%
GAATAAGCTTGCAAAATAGG+AGG + chr3_2:87940662-87940681 Msa0434920:intron 35.0%
AGACTAACATGTACAGTGTT+AGG - chr3_2:87940709-87940728 None:intergenic 35.0%
!! ACAAAATTTGTTGTGGCTGT+AGG - chr3_2:87941177-87941196 None:intergenic 35.0%
ATCGCACAATTGTGAAACTT+GGG - chr3_2:87941326-87941345 None:intergenic 35.0%
AATCGCACAATTGTGAAACT+TGG - chr3_2:87941327-87941346 None:intergenic 35.0%
AGTTTCACAATTGTGCGATT+TGG + chr3_2:87941327-87941346 Msa0434920:intron 35.0%
TTATTTGGTCAAAATGCGCA+TGG - chr3_2:87941417-87941436 None:intergenic 35.0%
! ACCCTTCTAATTTTACCCAA+TGG + chr3_2:87941578-87941597 Msa0434920:intron 35.0%
TTGCACACGGTGTAAATTTA+AGG - chr3_2:87941790-87941809 None:intergenic 35.0%
AACAAGTGAAAACTTGCACA+CGG - chr3_2:87941803-87941822 None:intergenic 35.0%
GTGAAATTAGAAGGGTAAGA+AGG + chr3_2:87942078-87942097 Msa0434920:intron 35.0%
TTTAATGATGTGCATCTCCA+TGG - chr3_2:87942209-87942228 None:intergenic 35.0%
! TTTTGGTCAAAATGTGCATG+GGG + chr3_2:87942246-87942265 Msa0434920:intron 35.0%
! TGGGGATTAGTAAATGCAAA+AGG + chr3_2:87942264-87942283 Msa0434920:intron 35.0%
! GGGGATTAGTAAATGCAAAA+GGG + chr3_2:87942265-87942284 Msa0434920:intron 35.0%
! GGGATTAGTAAATGCAAAAG+GGG + chr3_2:87942266-87942285 Msa0434920:intron 35.0%
!! TCGCACAATTCTAAAACTTG+GGG + chr3_2:87942336-87942355 Msa0434920:intron 35.0%
TCGCACAAATGTTAAACTTG+GGG + chr3_2:87942371-87942390 Msa0434920:intron 35.0%
! TGGGGTATTCTCATCTATTT+AGG + chr3_2:87942576-87942595 Msa0434920:intron 35.0%
ACAACAGAAACAACAAGGAA+GGG - chr3_2:87942920-87942939 None:intergenic 35.0%
AACAACAGAAACAACAAGGA+AGG - chr3_2:87942921-87942940 None:intergenic 35.0%
AGCAAACAACAGAAACAACA+AGG - chr3_2:87942925-87942944 None:intergenic 35.0%
CTTGTCAGAAAAAAACCCAA+AGG - chr3_2:87942979-87942998 None:intergenic 35.0%
!!! CTTTGGGTTTTTTTCTGACA+AGG + chr3_2:87942977-87942996 Msa0434920:intron 35.0%
!! AAAGATACAAAGGCACTTGA+GGG - chr3_2:87943063-87943082 None:intergenic 35.0%
! CTAAACATAAAAGAGTGCAG+AGG - chr3_2:87943175-87943194 None:intergenic 35.0%
! CTCTGCACTCTTTTATGTTT+AGG + chr3_2:87943173-87943192 Msa0434920:intron 35.0%
AAATAGAGGGACCAAAAAGT+TGG - chr3_2:87943265-87943284 None:intergenic 35.0%
ATGATGGTACCATATTAGCA+AGG - chr3_2:87943368-87943387 None:intergenic 35.0%
AAATTAATGGCATGGAAACG+AGG - chr3_2:87943397-87943416 None:intergenic 35.0%
ACAAATGAAGAACCCTAACT+TGG + chr3_2:87943483-87943502 Msa0434920:intron 35.0%
ATTACCACGTCATCAATTTG+GGG - chr3_2:87943515-87943534 None:intergenic 35.0%
CATTACCACGTCATCAATTT+GGG - chr3_2:87943516-87943535 None:intergenic 35.0%
TCATTACCACGTCATCAATT+TGG - chr3_2:87943517-87943536 None:intergenic 35.0%
!! AAATTGATGACGTGGTAATG+AGG + chr3_2:87943516-87943535 Msa0434920:intron 35.0%
!!! TCCGCTGACTTTTTAAATAG+GGG + chr3_2:87943633-87943652 Msa0434920:intron 35.0%
TCCCCTATTTAAAAAGTCAG+CGG - chr3_2:87943637-87943656 None:intergenic 35.0%
TAAATAGGGGACCAAAATGT+TGG + chr3_2:87943646-87943665 Msa0434920:intron 35.0%
ATGACTTATTGATCCAATGG+TGG - chr3_2:87943792-87943811 None:intergenic 35.0%
GGTATGACTTATTGATCCAA+TGG - chr3_2:87943795-87943814 None:intergenic 35.0%
TTGGATCAATAAGTCATACC+TGG + chr3_2:87943795-87943814 Msa0434920:intron 35.0%
!! GATGTGACTTGTTGATTCAA+CGG + chr3_2:87943832-87943851 Msa0434920:intron 35.0%
GTAGAAAACAAACTTGTGCA+TGG + chr3_2:87943854-87943873 Msa0434920:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr3_2:87944034-87944053 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr3_2:87944046-87944065 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr3_2:87944130-87944149 None:intergenic 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr3_2:87944186-87944205 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr3_2:87944191-87944210 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr3_2:87944211-87944230 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - chr3_2:87944398-87944417 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr3_2:87944402-87944421 Msa0434920:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG - chr3_2:87944411-87944430 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG - chr3_2:87944476-87944495 None:intergenic 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr3_2:87944509-87944528 Msa0434920:intron 35.0%
AGAGCCATAGTACAAAATGA+CGG - chr3_2:87944516-87944535 None:intergenic 35.0%
CATGGAATTTATCACATGGT+TGG + chr3_2:87944623-87944642 Msa0434920:intron 35.0%
TTAGAACTTTACTATCTGGC+TGG - chr3_2:87944756-87944775 None:intergenic 35.0%
!! CTTTTCTTGAGTACTTGCTA+CGG + chr3_2:87944790-87944809 Msa0434920:intron 35.0%
! ACTTGCATATTTTGCAGGTT+TGG + chr3_2:87944833-87944852 Msa0434920:intron 35.0%
! CTTGCATATTTTGCAGGTTT+GGG + chr3_2:87944834-87944853 Msa0434920:intron 35.0%
TGCAAGGTTAGTATAATTGG+TGG - chr3_2:87944926-87944945 None:intergenic 35.0%
CTGTGCAAGGTTAGTATAAT+TGG - chr3_2:87944929-87944948 None:intergenic 35.0%
CAATTATACTAACCTTGCAC+AGG + chr3_2:87944927-87944946 Msa0434920:CDS 35.0%
! ACTTTGAATTTTCAGCTGCA+TGG - chr3_2:87944954-87944973 None:intergenic 35.0%
GAAGTATGCAACTAAAGATG+AGG + chr3_2:87945011-87945030 Msa0434920:CDS 35.0%
TTATCAGGAAGAATAAGCTC+TGG - chr3_2:87945075-87945094 None:intergenic 35.0%
CCAATCTTGAAAACATCAAG+GGG + chr3_2:87945161-87945180 Msa0434920:three_prime_UTR 35.0%
CTTTCAAATTCATGGAAGAG+GGG + chr3_2:87945194-87945213 Msa0434920:three_prime_UTR 35.0%
ATCCACACTCAACAAAAACA+CGG - chr3_2:87945494-87945513 None:intergenic 35.0%
!!! GCTAATGCCAACACTTTTTC+AGG - chr3_2:87938854-87938873 None:intergenic 40.0%
CAAGGCTCCTGTTATTGATA+AGG + chr3_2:87939044-87939063 Msa0434920:CDS 40.0%
!! GTCATTGGTGATGTTCAGAT+TGG + chr3_2:87939093-87939112 Msa0434920:CDS 40.0%
GGTGATGTTCAGATTGGAAA+AGG + chr3_2:87939099-87939118 Msa0434920:CDS 40.0%
TGGTATGGATCTGTATTGAG+AGG + chr3_2:87939132-87939151 Msa0434920:CDS 40.0%
TGGATCTGTATTGAGAGGTA+AGG + chr3_2:87939137-87939156 Msa0434920:intron 40.0%
GGATCTGTATTGAGAGGTAA+GGG + chr3_2:87939138-87939157 Msa0434920:intron 40.0%
! GTCGCAGGGTCTTATAAATA+AGG + chr3_2:87939522-87939541 Msa0434920:intron 40.0%
GATCTTATAATTAGGGACGG+AGG + chr3_2:87939575-87939594 Msa0434920:intron 40.0%
! GGTGTTGCCTACTATTATTG+GGG + chr3_2:87940027-87940046 Msa0434920:CDS 40.0%
ATTGGGGATAATGTTACCGT+AGG + chr3_2:87940043-87940062 Msa0434920:CDS 40.0%
!!! GGTCATAGTGCTGTTTTACA+TGG + chr3_2:87940157-87940176 Msa0434920:intron 40.0%
TTTACATGGTTGCACTGTTG+AGG + chr3_2:87940171-87940190 Msa0434920:CDS 40.0%
! GATGAGGCTTTTGTTGGTAT+GGG + chr3_2:87940193-87940212 Msa0434920:CDS 40.0%
CGTCGTTGAGAAAAATGCTA+TGG + chr3_2:87940237-87940256 Msa0434920:CDS 40.0%
AAAAATGCTATGGTTGCTGC+TGG + chr3_2:87940247-87940266 Msa0434920:CDS 40.0%
CTTTGTATTCTGCCTCACAA+GGG - chr3_2:87940275-87940294 None:intergenic 40.0%
TCTTTGTATTCTGCCTCACA+AGG - chr3_2:87940276-87940295 None:intergenic 40.0%
GATTGTGTACGGTATAGTAG+AGG + chr3_2:87940360-87940379 Msa0434920:intron 40.0%
AAAGCAGATAGAGATGGAGA+AGG + chr3_2:87940473-87940492 Msa0434920:intron 40.0%
ACATACTACACTGTCAGTCT+AGG + chr3_2:87940765-87940784 Msa0434920:intron 40.0%
! TTACTGTGAGAGTATGACTG+TGG + chr3_2:87941197-87941216 Msa0434920:intron 40.0%
TCGCACAATTGTGAAACTTG+GGG - chr3_2:87941325-87941344 None:intergenic 40.0%
GCAAAGGAGGATAAAGTTGA+GGG - chr3_2:87941381-87941400 None:intergenic 40.0%
TGCAAAGGAGGATAAAGTTG+AGG - chr3_2:87941382-87941401 None:intergenic 40.0%
! AGGACTAGTAAATGCAAAGG+AGG - chr3_2:87941394-87941413 None:intergenic 40.0%
! TGGAGGACTAGTAAATGCAA+AGG - chr3_2:87941397-87941416 None:intergenic 40.0%
ATAGGAGAGTGAGAGTGAAA+AGG - chr3_2:87941535-87941554 None:intergenic 40.0%
TCAACATACTCATTGGCGAT+GGG + chr3_2:87941687-87941706 Msa0434920:intron 40.0%
!! TGATGGTGGGTGAAATTAGA+AGG + chr3_2:87942069-87942088 Msa0434920:intron 40.0%
!! GATGGTGGGTGAAATTAGAA+GGG + chr3_2:87942070-87942089 Msa0434920:intron 40.0%
AGTGTGAGAGTGAGAAAGAA+TGG + chr3_2:87942102-87942121 Msa0434920:intron 40.0%
GAAAGAATGGAGGTTTGATG+TGG + chr3_2:87942115-87942134 Msa0434920:intron 40.0%
TTTGATGTGGAGGTTGAAAG+AGG + chr3_2:87942128-87942147 Msa0434920:intron 40.0%
AGGTTGAAAGAGGAAGGAAA+AGG + chr3_2:87942138-87942157 Msa0434920:intron 40.0%
TTGAAAGAGGAAGGAAAAGG+AGG + chr3_2:87942141-87942160 Msa0434920:intron 40.0%
! GTTAATTTTCACGTTGGCCA+TGG + chr3_2:87942189-87942208 Msa0434920:intron 40.0%
ATGCAAAAGGGGTAATGTTG+AGG + chr3_2:87942277-87942296 Msa0434920:intron 40.0%
TGCAAAAGGGGTAATGTTGA+GGG + chr3_2:87942278-87942297 Msa0434920:intron 40.0%
! ACCGCTCATTTTAAACTTGG+TGG + chr3_2:87942307-87942326 Msa0434920:intron 40.0%
! GCCACCAAGTTTAAAATGAG+CGG - chr3_2:87942311-87942330 None:intergenic 40.0%
!! CGCACAATTCTAAAACTTGG+GGG + chr3_2:87942337-87942356 Msa0434920:intron 40.0%
!! GCACAATTCTAAAACTTGGG+GGG + chr3_2:87942338-87942357 Msa0434920:intron 40.0%
CGCACAAATGTTAAACTTGG+GGG + chr3_2:87942372-87942391 Msa0434920:intron 40.0%
GCACAAATGTTAAACTTGGG+GGG + chr3_2:87942373-87942392 Msa0434920:intron 40.0%
AAATATGGTGAAATGCAGCC+AGG + chr3_2:87942624-87942643 Msa0434920:intron 40.0%
TGTATCCATGCCATACACTT+TGG - chr3_2:87942655-87942674 None:intergenic 40.0%
AAGATTTAGGGACCTGGATT+TGG - chr3_2:87942761-87942780 None:intergenic 40.0%
TTGTGAAAAGACGCAAAAGC+AGG - chr3_2:87942812-87942831 None:intergenic 40.0%
CCAGAATAACCAAGGAAACT+TGG - chr3_2:87943021-87943040 None:intergenic 40.0%
CCAAGTTTCCTTGGTTATTC+TGG + chr3_2:87943018-87943037 Msa0434920:intron 40.0%
! TTTCCTTGGTTATTCTGGCT+TGG + chr3_2:87943023-87943042 Msa0434920:intron 40.0%
!! TTCCTTGGTTATTCTGGCTT+GGG + chr3_2:87943024-87943043 Msa0434920:intron 40.0%
!! AAGATACAAAGGCACTTGAG+GGG - chr3_2:87943062-87943081 None:intergenic 40.0%
!! GAAAGATACAAAGGCACTTG+AGG - chr3_2:87943064-87943083 None:intergenic 40.0%
!! TAAGGGGTACCAACATAGTT+GGG + chr3_2:87943133-87943152 Msa0434920:intron 40.0%
! TTGGGGATTTTGCCAAGTTA+GGG - chr3_2:87943498-87943517 None:intergenic 40.0%
! TTTGGGGATTTTGCCAAGTT+AGG - chr3_2:87943499-87943518 None:intergenic 40.0%
!! AAATCCCCAAATTGATGACG+TGG + chr3_2:87943508-87943527 Msa0434920:intron 40.0%
CCTATGTGACATTGCTTACA+TGG - chr3_2:87943557-87943576 None:intergenic 40.0%
CCATGTAAGCAATGTCACAT+AGG + chr3_2:87943554-87943573 Msa0434920:intron 40.0%
!! TTTTTGGTACCCCTTCACTT+TGG - chr3_2:87943611-87943630 None:intergenic 40.0%
! CACAAACTTGTTTCCACCAT+TGG + chr3_2:87943776-87943795 Msa0434920:intron 40.0%
CATCAAATCGCAATTGATCC+AGG - chr3_2:87943816-87943835 None:intergenic 40.0%
CAAACCTTATCCCACTAAGT+GGG + chr3_2:87943964-87943983 Msa0434920:intron 40.0%
AAACCTTATCCCACTAAGTG+GGG + chr3_2:87943965-87943984 Msa0434920:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr3_2:87944105-87944124 None:intergenic 40.0%
TCTTCTTACAACGGCATCTA+CGG + chr3_2:87944143-87944162 Msa0434920:intron 40.0%
ACACCATTAAAGAGAGAGTG+GGG - chr3_2:87944236-87944255 None:intergenic 40.0%
GACACCATTAAAGAGAGAGT+GGG - chr3_2:87944237-87944256 None:intergenic 40.0%
TGACACCATTAAAGAGAGAG+TGG - chr3_2:87944238-87944257 None:intergenic 40.0%
AGACTAGACAGGATAGGATT+AGG - chr3_2:87944263-87944282 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG - chr3_2:87944477-87944496 None:intergenic 40.0%
AGCTTTCTTAGAAACTTCGC+TGG - chr3_2:87944868-87944887 None:intergenic 40.0%
! AGTATAATTGGTGGCTGACT+GGG - chr3_2:87944917-87944936 None:intergenic 40.0%
! TAGTATAATTGGTGGCTGAC+TGG - chr3_2:87944918-87944937 None:intergenic 40.0%
! TGAGGAGTATGACTCTATGT+TGG + chr3_2:87945029-87945048 Msa0434920:CDS 40.0%
! GAGGAGTATGACTCTATGTT+GGG + chr3_2:87945030-87945049 Msa0434920:CDS 40.0%
!! ACTCTATGTTGGGTGTTGTT+CGG + chr3_2:87945040-87945059 Msa0434920:CDS 40.0%
!! CCCCTTGATGTTTTCAAGAT+TGG - chr3_2:87945164-87945183 None:intergenic 40.0%
! CATGGAAGAGGGGTTTATTT+TGG + chr3_2:87945204-87945223 Msa0434920:three_prime_UTR 40.0%
ACTCTAGCCTAGAAAACGTT+TGG - chr3_2:87945242-87945261 None:intergenic 40.0%
! CGTTTTCTAGGCTAGAGTTA+TGG + chr3_2:87945244-87945263 Msa0434920:three_prime_UTR 40.0%
TATTATGAGCAATCGCTTCC+TGG - chr3_2:87945283-87945302 None:intergenic 40.0%
TCAAACTGTGTTCTCCACTT+TGG + chr3_2:87945305-87945324 Msa0434920:three_prime_UTR 40.0%
CAAACTGTGTTCTCCACTTT+GGG + chr3_2:87945306-87945325 Msa0434920:three_prime_UTR 40.0%
!! AACCGTGTTTTTGTTGAGTG+TGG + chr3_2:87945489-87945508 Msa0434920:three_prime_UTR 40.0%
GAAGAAGAAATGGGAACCCT+CGG + chr3_2:87938889-87938908 Msa0434920:exon 45.0%
GCTGTATATTGCTCTTCCGA+GGG - chr3_2:87938908-87938927 None:intergenic 45.0%
GGAAGAGCAATATACAGCGT+TGG + chr3_2:87938910-87938929 Msa0434920:CDS 45.0%
! ACAGCGTTGGACAGTTGATT+CGG + chr3_2:87938923-87938942 Msa0434920:CDS 45.0%
!! GGACAGTTGATTCGGAAAAC+TGG + chr3_2:87938931-87938950 Msa0434920:CDS 45.0%
ACATCGAAGAACAGCTCTCT+AGG + chr3_2:87938995-87939014 Msa0434920:CDS 45.0%
ATGTGCGTAAAATGTGTCGC+AGG + chr3_2:87939507-87939526 Msa0434920:intron 45.0%
TGTGCGTAAAATGTGTCGCA+GGG + chr3_2:87939508-87939527 Msa0434920:intron 45.0%
TGGAAGTGGAACTAACCTAC+AGG + chr3_2:87939961-87939980 Msa0434920:CDS 45.0%
TAACCTACAGGATAACTCCC+TGG + chr3_2:87939973-87939992 Msa0434920:CDS 45.0%
TGACTTTGCAACATGCACCA+GGG - chr3_2:87939993-87940012 None:intergenic 45.0%
TTGACTTTGCAACATGCACC+AGG - chr3_2:87939994-87940013 None:intergenic 45.0%
GCAAAAAGGTCACTCACCTA+CGG - chr3_2:87940062-87940081 None:intergenic 45.0%
! GTTGAGGATGAGGCTTTTGT+TGG + chr3_2:87940187-87940206 Msa0434920:CDS 45.0%
! GGATGAGGCTTTTGTTGGTA+TGG + chr3_2:87940192-87940211 Msa0434920:CDS 45.0%
ATGGGTGCAATTCTGCTTGA+TGG + chr3_2:87940211-87940230 Msa0434920:CDS 45.0%
TACAAAGATTCCATCTGGCG+AGG + chr3_2:87940288-87940307 Msa0434920:CDS 45.0%
ATTAGACATACCTCGCCAGA+TGG - chr3_2:87940301-87940320 None:intergenic 45.0%
CTGGCGAGGTATGTCTAATT+TGG + chr3_2:87940302-87940321 Msa0434920:intron 45.0%
!! TTAGGTCGCTGGTTTGAATC+CGG + chr3_2:87940394-87940413 Msa0434920:intron 45.0%
AACTCCGGCTCTACCAATTT+GGG - chr3_2:87940428-87940447 None:intergenic 45.0%
TAACTCCGGCTCTACCAATT+TGG - chr3_2:87940429-87940448 None:intergenic 45.0%
CAAGCTTATTCTTACGAGGG+AGG - chr3_2:87940653-87940672 None:intergenic 45.0%
! TACACTGTCAGTCTAGGACT+AGG + chr3_2:87940771-87940790 Msa0434920:intron 45.0%
! ACACTGTCAGTCTAGGACTA+GGG + chr3_2:87940772-87940791 Msa0434920:intron 45.0%
CTGTGTCAACACTAGCACTA+TGG + chr3_2:87941126-87941145 Msa0434920:intron 45.0%
CGCACAATTGTGAAACTTGG+GGG - chr3_2:87941324-87941343 None:intergenic 45.0%
TTTGGTCAAAATGCGCATGG+AGG - chr3_2:87941414-87941433 None:intergenic 45.0%
TTGACCAAATAACGCTGACG+TGG + chr3_2:87941425-87941444 Msa0434920:intron 45.0%
TTAGCCACGTCAGCGTTATT+TGG - chr3_2:87941432-87941451 None:intergenic 45.0%
! GGGAGTGTGAGAGTAGAAAT+AGG - chr3_2:87941553-87941572 None:intergenic 45.0%
GTTCACTCGCTCATTCCATT+GGG - chr3_2:87941596-87941615 None:intergenic 45.0%
AGTTCACTCGCTCATTCCAT+TGG - chr3_2:87941597-87941616 None:intergenic 45.0%
GTCAACATACTCATTGGCGA+TGG + chr3_2:87941686-87941705 Msa0434920:intron 45.0%
TTGTAAGCGATGACAGACAG+TGG - chr3_2:87941906-87941925 None:intergenic 45.0%
GTCTGTCATCGCTTACAACA+CGG + chr3_2:87941908-87941927 Msa0434920:intron 45.0%
AATCTCTCCAGAACCATCGA+GGG + chr3_2:87942044-87942063 Msa0434920:intron 45.0%
GTGAGAGTGAGAAAGAATGG+AGG + chr3_2:87942105-87942124 Msa0434920:intron 45.0%
AGAATGGAGGTTTGATGTGG+AGG + chr3_2:87942118-87942137 Msa0434920:intron 45.0%
ATGTGGAGGTTGAAAGAGGA+AGG + chr3_2:87942132-87942151 Msa0434920:intron 45.0%
!!! TTAGCCACGCGAGTGTTTTT+TGG + chr3_2:87942229-87942248 Msa0434920:intron 45.0%
TTGACCAAAAAACACTCGCG+TGG - chr3_2:87942236-87942255 None:intergenic 45.0%
GCAAAAGGGGTAATGTTGAG+GGG + chr3_2:87942279-87942298 Msa0434920:intron 45.0%
AGCATCCAAAGTGTATGGCA+TGG + chr3_2:87942647-87942666 Msa0434920:intron 45.0%
AACGGTAGTTGTGCTCATGT+GGG - chr3_2:87942689-87942708 None:intergenic 45.0%
AAACGGTAGTTGTGCTCATG+TGG - chr3_2:87942690-87942709 None:intergenic 45.0%
CATCCATGCAGCTCAAGAAT+TGG - chr3_2:87942878-87942897 None:intergenic 45.0%
AACCCAAGCCAGAATAACCA+AGG - chr3_2:87943029-87943048 None:intergenic 45.0%
!!! GGTTATTCTGGCTTGGGTTT+TGG + chr3_2:87943030-87943049 Msa0434920:intron 45.0%
!! CTAAGGGGTACCAACATAGT+TGG + chr3_2:87943132-87943151 Msa0434920:intron 45.0%
CCAAGACATCCCAACTATGT+TGG - chr3_2:87943145-87943164 None:intergenic 45.0%
CCAACATAGTTGGGATGTCT+TGG + chr3_2:87943142-87943161 Msa0434920:intron 45.0%
! GGAAACGAGGTGTCAAATGA+TGG - chr3_2:87943384-87943403 None:intergenic 45.0%
! TGGTAATGAGGTGTCTAGTG+AGG + chr3_2:87943528-87943547 Msa0434920:intron 45.0%
GGCGTGCTCATTAATGATGT+GGG - chr3_2:87943581-87943600 None:intergenic 45.0%
TGGCGTGCTCATTAATGATG+TGG - chr3_2:87943582-87943601 None:intergenic 45.0%
GGTGGAAACAAGTTTGTGCA+TGG - chr3_2:87943774-87943793 None:intergenic 45.0%
CCACTTAGTGGGATAAGGTT+TGG - chr3_2:87943966-87943985 None:intergenic 45.0%
CCAAACCTTATCCCACTAAG+TGG + chr3_2:87943963-87943982 Msa0434920:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr3_2:87944111-87944130 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr3_2:87944121-87944140 None:intergenic 45.0%
CTTCTTACAACGGCATCTAC+GGG + chr3_2:87944144-87944163 Msa0434920:intron 45.0%
TACCCCCACTCTCTCTTTAA+TGG + chr3_2:87944230-87944249 Msa0434920:intron 45.0%
CACCATTAAAGAGAGAGTGG+GGG - chr3_2:87944235-87944254 None:intergenic 45.0%
GTGGTAAGACTAGACAGGAT+AGG - chr3_2:87944269-87944288 None:intergenic 45.0%
GATGAGTGGTAAGACTAGAC+AGG - chr3_2:87944274-87944293 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr3_2:87944316-87944335 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr3_2:87944319-87944338 Msa0434920:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr3_2:87944355-87944374 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr3_2:87944356-87944375 None:intergenic 45.0%
TCCGTACCATACAACATTGC+CGG + chr3_2:87944360-87944379 Msa0434920:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr3_2:87944364-87944383 None:intergenic 45.0%
CTTATCGCACAAAACACCTG+AGG + chr3_2:87944431-87944450 Msa0434920:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr3_2:87944450-87944469 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr3_2:87944464-87944483 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr3_2:87944473-87944492 None:intergenic 45.0%
AGCGCCTTTGAATGTTGTCA+TGG + chr3_2:87944605-87944624 Msa0434920:intron 45.0%
! CATATTTTGCAGGTTTGGGC+TGG + chr3_2:87944838-87944857 Msa0434920:intron 45.0%
!! CTCTATGTTGGGTGTTGTTC+GGG + chr3_2:87945041-87945060 Msa0434920:CDS 45.0%
! TCAGGAAGAATAAGCTCTGG+TGG - chr3_2:87945072-87945091 None:intergenic 45.0%
!! TATGGCTCCTTTCAAGTTCC+AGG + chr3_2:87945262-87945281 Msa0434920:three_prime_UTR 45.0%
ATCGCTTCCTGGAACTTGAA+AGG - chr3_2:87945272-87945291 None:intergenic 45.0%
! TGTGTTCTCCACTTTGGGTT+AGG + chr3_2:87945311-87945330 Msa0434920:three_prime_UTR 45.0%
! GTGTTCTCCACTTTGGGTTA+GGG + chr3_2:87945312-87945331 Msa0434920:three_prime_UTR 45.0%
! TGTTCTCCACTTTGGGTTAG+GGG + chr3_2:87945313-87945332 Msa0434920:three_prime_UTR 45.0%
TTGAGTGTGGATATGTACCC+CGG + chr3_2:87945502-87945521 Msa0434920:three_prime_UTR 45.0%
!!! AATAGATATTTTTAAATTAA+TGG - chr3_2:87943410-87943429 None:intergenic 5.0%
!! AATTTAACAAAATTAAAAAT+AGG + chr3_2:87943690-87943709 Msa0434920:intron 5.0%
!! ATTTAACAAAATTAAAAATA+GGG + chr3_2:87943691-87943710 Msa0434920:intron 5.0%
!! CAAAAAAAAAAAAAAAATTA+AGG - chr3_2:87944720-87944739 None:intergenic 5.0%
!!! AATTTTTTTTTTTTTTTTGT+TGG + chr3_2:87944721-87944740 Msa0434920:intron 5.0%
CTTGAGCATCAGAGACTGAG+AGG - chr3_2:87938820-87938839 None:intergenic 50.0%
CGCTGTATATTGCTCTTCCG+AGG - chr3_2:87938909-87938928 None:intergenic 50.0%
ATGAGAACCGAGGCGATCAA+CGG - chr3_2:87938962-87938981 None:intergenic 50.0%
GTTCTTCGATGTAGCCACCT+TGG - chr3_2:87938987-87939006 None:intergenic 50.0%
TCACCAATGACAGCTGCACT+TGG - chr3_2:87939084-87939103 None:intergenic 50.0%
TGGTTGCACTGTTGAGGATG+AGG + chr3_2:87940177-87940196 Msa0434920:CDS 50.0%
!! GTAGAGGCAGAGTTAGCCTT+AGG + chr3_2:87940376-87940395 Msa0434920:intron 50.0%
GGATTCAAACCAGCGACCTA+AGG - chr3_2:87940395-87940414 None:intergenic 50.0%
CTTACGAGGGAGGTTCATAG+AGG - chr3_2:87940643-87940662 None:intergenic 50.0%
! CACTGTCAGTCTAGGACTAG+GGG + chr3_2:87940773-87940792 Msa0434920:intron 50.0%
GTGTCATGCTGTCATGGTGA+TGG - chr3_2:87941155-87941174 None:intergenic 50.0%
! CTGTAGGTGTCATGCTGTCA+TGG - chr3_2:87941161-87941180 None:intergenic 50.0%
TCTCCACGTGTTTGCCAACA+TGG + chr3_2:87941468-87941487 Msa0434920:intron 50.0%
CTCCACGTGTTTGCCAACAT+GGG + chr3_2:87941469-87941488 Msa0434920:intron 50.0%
TTCCCATGTTGGCAAACACG+TGG - chr3_2:87941474-87941493 None:intergenic 50.0%
GCGAGTGAACTTGACTACGT+TGG + chr3_2:87941606-87941625 Msa0434920:intron 50.0%
ACATACTCATTGGCGATGGG+CGG + chr3_2:87941690-87941709 Msa0434920:intron 50.0%
ATCGCTTACAACACGGCAAG+AGG + chr3_2:87941915-87941934 Msa0434920:intron 50.0%
GAATCTCTCCAGAACCATCG+AGG + chr3_2:87942043-87942062 Msa0434920:intron 50.0%
CCATACACTTTGGATGCTCC+TGG - chr3_2:87942645-87942664 None:intergenic 50.0%
!! CCAGGAGCATCCAAAGTGTA+TGG + chr3_2:87942642-87942661 Msa0434920:intron 50.0%
TGGCCAATTCTTGAGCTGCA+TGG + chr3_2:87942872-87942891 Msa0434920:intron 50.0%
AGGCAGATGCCAAGTTTCCT+TGG + chr3_2:87943009-87943028 Msa0434920:intron 50.0%
!! TTTTTGGTCCCCCTCCTCTT+TGG + chr3_2:87943302-87943321 Msa0434920:intron 50.0%
CACATCATCCAAAGAGGAGG+GGG - chr3_2:87943313-87943332 None:intergenic 50.0%
CCACATCATCCAAAGAGGAG+GGG - chr3_2:87943314-87943333 None:intergenic 50.0%
GCCACATCATCCAAAGAGGA+GGG - chr3_2:87943315-87943334 None:intergenic 50.0%
CCATATTAGCAAGGCCACGT+AGG - chr3_2:87943359-87943378 None:intergenic 50.0%
! CCTACGTGGCCTTGCTAATA+TGG + chr3_2:87943356-87943375 Msa0434920:intron 50.0%
GCCACCTCATCCAAAGTGAA+GGG + chr3_2:87943598-87943617 Msa0434920:intron 50.0%
CCACCTCATCCAAAGTGAAG+GGG + chr3_2:87943599-87943618 Msa0434920:intron 50.0%
GTACCCCTTCACTTTGGATG+AGG - chr3_2:87943605-87943624 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr3_2:87943969-87943988 Msa0434920:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+CGG - chr3_2:87944308-87944327 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr3_2:87944369-87944388 None:intergenic 50.0%
! GTTCTCCACTTTGGGTTAGG+GGG + chr3_2:87945314-87945333 Msa0434920:three_prime_UTR 50.0%
ACTTTCCCCCTAACCCAAAG+TGG - chr3_2:87945322-87945341 None:intergenic 50.0%
! TTAGGGGGAAAGTGTGTGGT+AGG + chr3_2:87945329-87945348 Msa0434920:three_prime_UTR 50.0%
CATCAGAGACTGAGAGGTCG+AGG - chr3_2:87938814-87938833 None:intergenic 55.0%
CACCTTGGAGATGAGAACCG+AGG - chr3_2:87938972-87938991 None:intergenic 55.0%
CTCGGTTCTCATCTCCAAGG+TGG + chr3_2:87938970-87938989 Msa0434920:CDS 55.0%
GCACCAAGTGCAGCTGTCAT+TGG + chr3_2:87939078-87939097 Msa0434920:CDS 55.0%
GCACCAGGGAGTTATCCTGT+AGG - chr3_2:87939979-87939998 None:intergenic 55.0%
!! CAGAGTTAGCCTTAGGTCGC+TGG + chr3_2:87940383-87940402 Msa0434920:intron 55.0%
! CTGGTTTGAATCCGGCAGGT+CGG + chr3_2:87940402-87940421 Msa0434920:intron 55.0%
TCGGCCCAAATTGGTAGAGC+CGG + chr3_2:87940421-87940440 Msa0434920:intron 55.0%
CATCAAGCCCTCGATGGTTC+TGG - chr3_2:87942054-87942073 None:intergenic 55.0%
CAGAACCATCGAGGGCTTGA+TGG + chr3_2:87942052-87942071 Msa0434920:intron 55.0%
AACCATCGAGGGCTTGATGG+TGG + chr3_2:87942055-87942074 Msa0434920:intron 55.0%
! ACCATCGAGGGCTTGATGGT+GGG + chr3_2:87942056-87942075 Msa0434920:intron 55.0%
CCCCTCCTCTTTGGATGATG+TGG + chr3_2:87943311-87943330 Msa0434920:intron 55.0%
CGCCACATCATCCAAAGAGG+AGG - chr3_2:87943316-87943335 None:intergenic 55.0%
GTGCGCCACATCATCCAAAG+AGG - chr3_2:87943319-87943338 None:intergenic 55.0%
CGCCACCTCATCCAAAGTGA+AGG + chr3_2:87943597-87943616 Msa0434920:intron 55.0%
CCCCTTCACTTTGGATGAGG+TGG - chr3_2:87943602-87943621 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr3_2:87943971-87943990 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr3_2:87943977-87943996 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr3_2:87943978-87943997 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr3_2:87943977-87943996 Msa0434920:intron 55.0%
CGGATGTTGCGTTGGATGAG+TGG - chr3_2:87944288-87944307 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG - chr3_2:87944382-87944401 None:intergenic 55.0%
! TGGGTTAGGGGGAAAGTGTG+TGG + chr3_2:87945325-87945344 Msa0434920:three_prime_UTR 55.0%
AGTGTGGATATGTACCCCGG+TGG + chr3_2:87945505-87945524 Msa0434920:three_prime_UTR 55.0%
CTGAGAGGTCGAGGTAGACG+TGG - chr3_2:87938805-87938824 None:intergenic 60.0%
GGTCAAGCCGTTGATCGCCT+CGG + chr3_2:87938952-87938971 Msa0434920:CDS 60.0%
CGCCTCGGTTCTCATCTCCA+AGG + chr3_2:87938967-87938986 Msa0434920:CDS 60.0%
TTGCTGCTGGAGCCCTTGTG+AGG + chr3_2:87940260-87940279 Msa0434920:CDS 60.0%
!! GTCGCTGGTTTGAATCCGGC+AGG + chr3_2:87940398-87940417 Msa0434920:intron 60.0%
ACCAATTTGGGCCGACCTGC+CGG - chr3_2:87940416-87940435 None:intergenic 60.0%
ACCCACCATCAAGCCCTCGA+TGG - chr3_2:87942060-87942079 None:intergenic 60.0%
CGGAGATGCGGATGTTGCGT+TGG - chr3_2:87944296-87944315 None:intergenic 60.0%
CAGCTGCATGGACCTGTGCA+AGG - chr3_2:87944942-87944961 None:intergenic 60.0%
TCCGGCAGGTCGGCCCAAAT+TGG + chr3_2:87940412-87940431 Msa0434920:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 87938784 87945534 87938784 ID=Msa0434920;Name=Msa0434920
chr3_2 mRNA 87938784 87945534 87938784 ID=Msa0434920-mRNA-1;Parent=Msa0434920;Name=Msa0434920-mRNA-1;_AED=0.04;_eAED=0.04;_QI=114|1|1|1|1|1|4|400|272
chr3_2 exon 87938784 87939153 87938784 ID=Msa0434920-mRNA-1:exon:25722;Parent=Msa0434920-mRNA-1
chr3_2 exon 87939939 87940064 87939939 ID=Msa0434920-mRNA-1:exon:25723;Parent=Msa0434920-mRNA-1
chr3_2 exon 87940158 87940309 87940158 ID=Msa0434920-mRNA-1:exon:25724;Parent=Msa0434920-mRNA-1
chr3_2 exon 87944850 87945534 87944850 ID=Msa0434920-mRNA-1:exon:25725;Parent=Msa0434920-mRNA-1
chr3_2 five_prime_UTR 87938784 87938897 87938784 ID=Msa0434920-mRNA-1:five_prime_utr;Parent=Msa0434920-mRNA-1
chr3_2 CDS 87938898 87939153 87938898 ID=Msa0434920-mRNA-1:cds;Parent=Msa0434920-mRNA-1
chr3_2 CDS 87939939 87940064 87939939 ID=Msa0434920-mRNA-1:cds;Parent=Msa0434920-mRNA-1
chr3_2 CDS 87940158 87940309 87940158 ID=Msa0434920-mRNA-1:cds;Parent=Msa0434920-mRNA-1
chr3_2 CDS 87944850 87945134 87944850 ID=Msa0434920-mRNA-1:cds;Parent=Msa0434920-mRNA-1
chr3_2 three_prime_UTR 87945135 87945534 87945135 ID=Msa0434920-mRNA-1:three_prime_utr;Parent=Msa0434920-mRNA-1
Gene Sequence

>Msa0434920

ATGGGAACCCTCGGAAGAGCAATATACAGCGTTGGACAGTTGATTCGGAAAACTGGTCAAGCCGTTGATCGCCTCGGTTCTCATCTCCAAGGTGGCTACATCGAAGAACAGCTCTCTAGGCATCGAACTATCTTGAACATATTTGACAAGGCTCCTGTTATTGATAAGGATGTCTTTGTTGCACCAAGTGCAGCTGTCATTGGTGATGTTCAGATTGGAAAAGGGTCATCAATTTGGTATGGATCTGTATTGAGAGGTGATGTTAACAGCATTAGAATTGGAAGTGGAACTAACCTACAGGATAACTCCCTGGTGCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCTACTATTATTGGGGATAATGTTACCGTAGGTCATAGTGCTGTTTTACATGGTTGCACTGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAATTCTGCTTGATGGCGTCGTCGTTGAGAAAAATGCTATGGTTGCTGCTGGAGCCCTTGTGAGGCAGAATACAAAGATTCCATCTGGCGAGGTTTGGGCTGGCAATCCAGCGAAGTTTCTAAGAAAGCTCACCGATGAAGAGATAGCTTTTATCTCCCAGTCAGCCACCAATTATACTAACCTTGCACAGGTCCATGCAGCTGAAAATTCAAAGTCCTATGAAGAAATTGAGTTTGAGAAGGTGCTGCGTAAGAAGTATGCAACTAAAGATGAGGAGTATGACTCTATGTTGGGTGTTGTTCGGGAGATTCCACCAGAGCTTATTCTTCCTGATAATGTCTTACCTGATAAAGCAAAAAAAGCTCTTAAAATATGA
Protein sequence

>Msa0434920

MGTLGRAIYSVGQLIRKTGQAVDRLGSHLQGGYIEEQLSRHRTILNIFDKAPVIDKDVFVAPSAAVIGDVQIGKGSSIWYGSVLRGDVNSIRIGSGTNLQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGAILLDGVVVEKNAMVAAGALVRQNTKIPSGEVWAGNPAKFLRKLTDEEIAFISQSATNYTNLAQVHAAENSKSYEEIEFEKVLRKKYATKDEEYDSMLGVVREIPPELILPDNVLPDKAKKALKI*