Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101190 | XP_003624590.2 | 97.363 | 455 | 11 | 1 | 1 | 454 | 1 | 455 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101190 | sp|P52914|NTPA_PEA | 68.062 | 454 | 143 | 2 | 1 | 452 | 1 | 454 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101190 | Q84UD9 | 97.363 | 455 | 11 | 1 | 1 | 454 | 1 | 455 | 0.0 | 904 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0110350 | Msa1101190 | 0.809614 | 1.734508e-50 | -8.615850e-47 |
| Msa1031420 | Msa1101190 | 0.938749 | 4.020844e-99 | -8.615850e-47 |
| Msa1031430 | Msa1101190 | 0.814557 | 1.450101e-51 | -8.615850e-47 |
| Msa1101190 | Msa1338550 | 0.822614 | 2.156076e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101190 | MtrunA17_Chr7g0252921 | 97.363 | 455 | 11 | 1 | 1 | 454 | 1 | 455 | 0.0 | 904 |
| Msa1101190 | MtrunA17_Chr7g0252911 | 67.955 | 440 | 141 | 0 | 14 | 453 | 16 | 455 | 0.0 | 636 |
| Msa1101190 | MtrunA17_Chr4g0015031 | 68.943 | 454 | 139 | 2 | 1 | 452 | 12 | 465 | 0.0 | 630 |
| Msa1101190 | MtrunA17_Chr7g0252891 | 69.011 | 455 | 138 | 3 | 1 | 452 | 23 | 477 | 0.0 | 628 |
| Msa1101190 | MtrunA17_Chr7g0252881 | 69.545 | 440 | 133 | 1 | 14 | 452 | 16 | 455 | 0.0 | 626 |
| Msa1101190 | MtrunA17_Chr7g0252861 | 58.636 | 440 | 178 | 3 | 5 | 442 | 29 | 466 | 0.0 | 513 |
| Msa1101190 | MtrunA17_Chr6g0461671 | 56.944 | 432 | 185 | 1 | 13 | 443 | 51 | 482 | 3.32e-174 | 497 |
| Msa1101190 | MtrunA17_Chr7g0252941 | 94.253 | 174 | 10 | 0 | 241 | 414 | 6 | 179 | 1.88e-106 | 313 |
| Msa1101190 | MtrunA17_Chr5g0417201 | 29.206 | 428 | 251 | 16 | 35 | 437 | 72 | 472 | 1.35e-37 | 144 |
| Msa1101190 | MtrunA17_Chr7g0252901 | 48.571 | 105 | 46 | 1 | 348 | 452 | 3 | 99 | 1.18e-29 | 111 |
| Msa1101190 | MtrunA17_Chr4g0058831 | 23.629 | 474 | 260 | 18 | 36 | 437 | 45 | 488 | 6.89e-24 | 104 |
| Msa1101190 | MtrunA17_Chr7g0252931 | 67.647 | 68 | 18 | 2 | 178 | 245 | 7 | 70 | 1.46e-20 | 85.5 |
| Msa1101190 | MtrunA17_Chr8g0369851 | 31.633 | 196 | 112 | 4 | 37 | 210 | 96 | 291 | 3.76e-19 | 90.5 |
| Msa1101190 | MtrunA17_Chr5g0407961 | 24.364 | 472 | 232 | 19 | 43 | 437 | 97 | 520 | 7.03e-16 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101190 | AT5G18280.1 | 55.072 | 414 | 185 | 1 | 30 | 442 | 58 | 471 | 1.34e-160 | 462 |
| Msa1101190 | AT3G04080.1 | 54.975 | 402 | 180 | 1 | 42 | 442 | 69 | 470 | 7.98e-154 | 445 |
| Msa1101190 | AT1G14240.1 | 28.702 | 439 | 265 | 13 | 22 | 437 | 50 | 463 | 8.77e-45 | 163 |
| Msa1101190 | AT1G14240.4 | 28.702 | 439 | 265 | 13 | 22 | 437 | 50 | 463 | 8.77e-45 | 163 |
| Msa1101190 | AT1G14240.2 | 28.702 | 439 | 265 | 13 | 22 | 437 | 50 | 463 | 8.77e-45 | 163 |
| Msa1101190 | AT1G14240.3 | 28.604 | 437 | 264 | 14 | 22 | 437 | 50 | 459 | 2.63e-41 | 153 |
| Msa1101190 | AT1G14250.1 | 28.372 | 430 | 257 | 16 | 34 | 437 | 63 | 467 | 1.41e-40 | 152 |
| Msa1101190 | AT1G14230.1 | 28.571 | 420 | 250 | 15 | 43 | 437 | 81 | 475 | 4.75e-40 | 150 |
| Msa1101190 | AT2G02970.1 | 28.372 | 430 | 250 | 14 | 43 | 442 | 87 | 488 | 5.22e-39 | 148 |
| Msa1101190 | AT4G19180.3 | 25.879 | 313 | 173 | 11 | 41 | 307 | 143 | 442 | 2.53e-16 | 82.0 |
| Msa1101190 | AT4G19180.1 | 25.879 | 313 | 173 | 11 | 41 | 307 | 143 | 442 | 2.53e-16 | 82.0 |
| Msa1101190 | AT4G19180.2 | 25.879 | 313 | 173 | 11 | 41 | 307 | 143 | 442 | 2.53e-16 | 82.0 |
Find 105 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATCCTTGATACGAATTT+TGG | 0.128519 | 7_3:-31763900 | None:intergenic |
| GTACATGAAACGATCAAATT+TGG | 0.196830 | 7_3:-31764307 | None:intergenic |
| CCCAAGCTTAACGGGTGTTT+TGG | 0.212332 | 7_3:-31760096 | None:intergenic |
| TGCAGGCAACAGCAGGTTTA+AGG | 0.216942 | 7_3:+31760711 | Msa1101190:intron |
| AACAGCAGGTTTAAGGCTTT+TGG | 0.255686 | 7_3:+31760718 | Msa1101190:CDS |
| GGTGACAATTAACTATGTTT+TGG | 0.262537 | 7_3:+31762633 | Msa1101190:intron |
| CAATATACGTTGTTTGTTGA+TGG | 0.267754 | 7_3:+31764031 | Msa1101190:CDS |
| CTCTTTGCATTCATCAATGT+TGG | 0.306724 | 7_3:-31763459 | None:intergenic |
| TATATTGTTTCCATGATATT+GGG | 0.324491 | 7_3:-31759644 | None:intergenic |
| GAATTCTTCCGAATTGATAT+TGG | 0.324511 | 7_3:+31760745 | Msa1101190:CDS |
| GTATATTGTTTCCATGATAT+TGG | 0.332361 | 7_3:-31759645 | None:intergenic |
| CATCAACAAACAACGTATAT+TGG | 0.340754 | 7_3:-31764030 | None:intergenic |
| TCTTTGCATTCATCAATGTT+GGG | 0.343236 | 7_3:-31763458 | None:intergenic |
| CGTATCAAGGATCTGAAAAC+TGG | 0.349928 | 7_3:+31763908 | Msa1101190:CDS |
| TGGAACGGTGGAGGAGGAAG+TGG | 0.352169 | 7_3:+31763548 | Msa1101190:CDS |
| GAGGTTAGAGTTTCTTGTTT+TGG | 0.355671 | 7_3:-31759688 | None:intergenic |
| CTCAAGAAGGTTCTTATTTG+TGG | 0.356315 | 7_3:+31760939 | Msa1101190:CDS |
| CCAAAACACCCGTTAAGCTT+GGG | 0.375488 | 7_3:+31760096 | Msa1101190:CDS |
| AAAGGCACATATACATATTC+AGG | 0.381400 | 7_3:+31763401 | Msa1101190:intron |
| GATCTAAGTTCTGATCAAAA+TGG | 0.383146 | 7_3:-31759762 | None:intergenic |
| AGAGACTCTGCTGCTTCCTT+CGG | 0.385467 | 7_3:-31760023 | None:intergenic |
| TCTTTCAGTTATTTGCGCTT+TGG | 0.390237 | 7_3:+31762934 | Msa1101190:intron |
| CCATATGGGAAATGTACTTT+TGG | 0.395209 | 7_3:+31763518 | Msa1101190:CDS |
| ATATTCAGGAGAGGAGTATA+AGG | 0.395985 | 7_3:+31763415 | Msa1101190:CDS |
| AGTTTGTAAAACAAAATATA+AGG | 0.398841 | 7_3:+31763940 | Msa1101190:CDS |
| TACATGAAACGATCAAATTT+GGG | 0.400032 | 7_3:-31764306 | None:intergenic |
| GTGAATGATCCATGTCCATA+TGG | 0.403181 | 7_3:+31763503 | Msa1101190:CDS |
| TATGCTAGTTGTGTTATAAC+CGG | 0.415958 | 7_3:+31759519 | Msa1101190:five_prime_UTR |
| ATCTGCGTATGCACTCAAAC+CGG | 0.416171 | 7_3:-31759997 | None:intergenic |
| TCAAGAAGGTTCTTATTTGT+GGG | 0.427679 | 7_3:+31760940 | Msa1101190:CDS |
| AATAAGTGGATATGTGGCTT+TGG | 0.427953 | 7_3:-31763966 | None:intergenic |
| TAGTTAGTTAGATGAATTGA+AGG | 0.429874 | 7_3:-31759492 | None:intergenic |
| ATAAGATCCAAGCATGCATA+TGG | 0.431391 | 7_3:-31764004 | None:intergenic |
| AAAACCAACCCCAAGCTTAA+CGG | 0.432045 | 7_3:-31760105 | None:intergenic |
| TAATCTCTTGCAATGGGTCT+AGG | 0.432068 | 7_3:-31764197 | None:intergenic |
| CCAGCTAAAATGCAAGGATT+AGG | 0.433680 | 7_3:-31763003 | None:intergenic |
| ACGTTGTTTGTTGATGGATT+TGG | 0.437309 | 7_3:+31764037 | Msa1101190:CDS |
| CTTTCTGCTTGCTCTAAAAG+TGG | 0.437669 | 7_3:-31760050 | None:intergenic |
| CCCAAAACACCCGTTAAGCT+TGG | 0.438583 | 7_3:+31760095 | Msa1101190:CDS |
| TACCGCTTCCAATATCAATT+CGG | 0.439103 | 7_3:-31760753 | None:intergenic |
| ATGCAAAGAGATAATTCTTA+AGG | 0.447865 | 7_3:+31763472 | Msa1101190:CDS |
| TCCTCTCCTTGAGGTACTTG+TGG | 0.454926 | 7_3:-31762760 | None:intergenic |
| AAACCAACCCCAAGCTTAAC+GGG | 0.457717 | 7_3:-31760104 | None:intergenic |
| CCACGGTAATCTCTTGCAAT+GGG | 0.459035 | 7_3:-31764203 | None:intergenic |
| ATCTCTTCCTCCCAATATCA+TGG | 0.459648 | 7_3:+31759634 | Msa1101190:CDS |
| TACGCTGTCGTCTTTGATGC+TGG | 0.466964 | 7_3:+31759712 | Msa1101190:CDS |
| ATTATTGATGGTACTCAAGA+AGG | 0.468345 | 7_3:+31760926 | Msa1101190:CDS |
| ACAGTGGCAGTAGCTGATCT+TGG | 0.468636 | 7_3:+31762682 | Msa1101190:CDS |
| GGGATATGGAACGGTGGAGG+AGG | 0.473543 | 7_3:+31763542 | Msa1101190:CDS |
| AATATTACCTCTATGTTCAC+AGG | 0.473842 | 7_3:+31762818 | Msa1101190:CDS |
| GTCTTTGATGCTGGTAGCAC+CGG | 0.473853 | 7_3:+31759721 | Msa1101190:CDS |
| CCAAAAGTACATTTCCCATA+TGG | 0.474809 | 7_3:-31763518 | None:intergenic |
| GGTGGGATATGGAACGGTGG+AGG | 0.488863 | 7_3:+31763539 | Msa1101190:CDS |
| TTCCGAATTGATATTGGAAG+CGG | 0.494804 | 7_3:+31760751 | Msa1101190:CDS |
| TAAGCTTCTAGATTTAAACT+TGG | 0.496048 | 7_3:+31764339 | Msa1101190:exon |
| GTGGCAGTAGCTGATCTTGG+AGG | 0.499054 | 7_3:+31762685 | Msa1101190:CDS |
| GCCACGGTAATCTCTTGCAA+TGG | 0.500788 | 7_3:-31764204 | None:intergenic |
| AAGCTTCTAGATTTAAACTT+GGG | 0.503631 | 7_3:+31764340 | Msa1101190:exon |
| ATGATAATGCAGGCAACAGC+AGG | 0.504918 | 7_3:+31760704 | Msa1101190:intron |
| GAAGGGAAACTATTTGAAAC+CGG | 0.506307 | 7_3:-31759538 | None:intergenic |
| TATTGGGAGGAAGAGATTGT+AGG | 0.515388 | 7_3:-31759628 | None:intergenic |
| TGAATGATCCATGTCCATAT+GGG | 0.518375 | 7_3:+31763504 | Msa1101190:CDS |
| CTTTGCATTCATCAATGTTG+GGG | 0.519197 | 7_3:-31763457 | None:intergenic |
| GTGGATGCAGCATGGCCTCT+AGG | 0.524509 | 7_3:+31764255 | Msa1101190:CDS |
| TAGTATGTGGCCAGTGGGAA+GGG | 0.525439 | 7_3:-31759555 | None:intergenic |
| CAAATAGTTTCCCTTCCCAC+TGG | 0.529857 | 7_3:+31759545 | Msa1101190:five_prime_UTR |
| CAATTCCAAAATTCGTATCA+AGG | 0.530942 | 7_3:+31763895 | Msa1101190:CDS |
| AAATAAGCATATGATTGGTA+AGG | 0.538345 | 7_3:+31759428 | Msa1101190:five_prime_UTR |
| TAGTCTTCCATATGCATGCT+TGG | 0.538512 | 7_3:+31763997 | Msa1101190:CDS |
| TTCATGTTGTAGACAACGCC+CGG | 0.539719 | 7_3:+31759978 | Msa1101190:intron |
| TTTAGAGCAAGCAGAAAGAG+TGG | 0.540525 | 7_3:+31760055 | Msa1101190:CDS |
| GATGCAGTAGGAATTATTGA+TGG | 0.541442 | 7_3:+31760914 | Msa1101190:CDS |
| TCTGCGTATGCACTCAAACC+GGG | 0.541965 | 7_3:-31759996 | None:intergenic |
| AACTTAGATCTTCTTCACAT+TGG | 0.549130 | 7_3:+31759775 | Msa1101190:CDS |
| TGGCAGTAGCTGATCTTGGA+GGG | 0.552378 | 7_3:+31762686 | Msa1101190:CDS |
| ATGTATGGATCCTCTCCTTG+AGG | 0.555015 | 7_3:-31762769 | None:intergenic |
| AATGTTGGGGCCAGAAGCAG+TGG | 0.573188 | 7_3:-31763444 | None:intergenic |
| CAAAACACCCGTTAAGCTTG+GGG | 0.575382 | 7_3:+31760097 | Msa1101190:CDS |
| ATATTCAATTTGATTTGCCA+CGG | 0.578091 | 7_3:-31764220 | None:intergenic |
| CACAATGATACAAATGAGAG+TGG | 0.584547 | 7_3:-31764430 | None:intergenic |
| GCAGTAGCTGATCTTGGAGG+GGG | 0.588259 | 7_3:+31762688 | Msa1101190:CDS |
| GTAGACATGAACACGGCTAC+CGG | 0.589772 | 7_3:-31759740 | None:intergenic |
| TCCATGCTTGTTGTAGTATG+TGG | 0.591213 | 7_3:-31759568 | None:intergenic |
| GGAACGGTGGAGGAGGAAGT+GGG | 0.591214 | 7_3:+31763549 | Msa1101190:CDS |
| ATCAAAGACGACAGCGTACG+AGG | 0.591264 | 7_3:-31759707 | None:intergenic |
| GGCAGTAGCTGATCTTGGAG+GGG | 0.592478 | 7_3:+31762687 | Msa1101190:CDS |
| GCCACATACTACAACAAGCA+TGG | 0.594864 | 7_3:+31759567 | Msa1101190:exon |
| AATTAAACCTGTGAACATAG+AGG | 0.597635 | 7_3:-31762825 | None:intergenic |
| GTAGTATGTGGCCAGTGGGA+AGG | 0.602099 | 7_3:-31759556 | None:intergenic |
| TGATAGCCAGCTAAAATGCA+AGG | 0.615009 | 7_3:-31763009 | None:intergenic |
| GCTTCTATTGCATTGCCTAG+AGG | 0.615740 | 7_3:-31764270 | None:intergenic |
| TGTTGTAGTATGTGGCCAGT+GGG | 0.622928 | 7_3:-31759560 | None:intergenic |
| ATTGTTTCCATGATATTGGG+AGG | 0.626102 | 7_3:-31759641 | None:intergenic |
| TGAATATCAAGATGCAGTTG+TGG | 0.629356 | 7_3:+31764236 | Msa1101190:CDS |
| AACGTACAATCTGATGCAGT+AGG | 0.629562 | 7_3:+31760902 | Msa1101190:CDS |
| TAGCAGATATATACCCCTGT+AGG | 0.630726 | 7_3:-31763611 | None:intergenic |
| CACATATACATATTCAGGAG+AGG | 0.631559 | 7_3:+31763406 | Msa1101190:CDS |
| TCCACAAGTACCTCAAGGAG+AGG | 0.636834 | 7_3:+31762759 | Msa1101190:CDS |
| AAAGCTCCACAAGTACCTCA+AGG | 0.645580 | 7_3:+31762754 | Msa1101190:CDS |
| GTACATTTCCCATATGGACA+TGG | 0.648948 | 7_3:-31763512 | None:intergenic |
| CAAAATGGTAGACATGAACA+CGG | 0.665622 | 7_3:-31759747 | None:intergenic |
| TTGTTGTAGTATGTGGCCAG+TGG | 0.699635 | 7_3:-31759561 | None:intergenic |
| ATGCAGTTGTGGATGCAGCA+TGG | 0.702608 | 7_3:+31764247 | Msa1101190:CDS |
| TTTGGTGGGATATGGAACGG+TGG | 0.747214 | 7_3:+31763536 | Msa1101190:CDS |
| CCCATTGCAAGAGATTACCG+TGG | 0.756212 | 7_3:+31764203 | Msa1101190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAAATTAAAATAATA+AGG | + | chr7_3:31761781-31761800 | Msa1101190:intron | 0.0% |
| !! | TATTAAAATTAAAATAATAA+GGG | + | chr7_3:31761782-31761801 | Msa1101190:intron | 0.0% |
| !! | ATTAATTAAATATTACATCT+TGG | + | chr7_3:31759826-31759845 | Msa1101190:intron | 10.0% |
| !! | ATCATATAATATATATTTAG+AGG | - | chr7_3:31760504-31760523 | None:intergenic | 10.0% |
| !! | TTAATCTTTACAATTATTAT+AGG | + | chr7_3:31761049-31761068 | Msa1101190:intron | 10.0% |
| !! | TAATCTTTACAATTATTATA+GGG | + | chr7_3:31761050-31761069 | Msa1101190:intron | 10.0% |
| !!! | TAAGTAATTTTTTTTTTGTA+GGG | - | chr7_3:31761153-31761172 | None:intergenic | 10.0% |
| !!! | ATAAGTAATTTTTTTTTTGT+AGG | - | chr7_3:31761154-31761173 | None:intergenic | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | - | chr7_3:31761215-31761234 | None:intergenic | 10.0% |
| !!! | AATTTTTGCAATATTTTTTT+CGG | + | chr7_3:31761381-31761400 | Msa1101190:intron | 10.0% |
| !! | TAATCAATACTTATAATAAT+GGG | - | chr7_3:31761611-31761630 | None:intergenic | 10.0% |
| !! | TTAATCAATACTTATAATAA+TGG | - | chr7_3:31761612-31761631 | None:intergenic | 10.0% |
| !! | AAAAAAATGAACAAAAAAAA+AGG | - | chr7_3:31763338-31763357 | None:intergenic | 10.0% |
| !!! | CATGAATTTAAATTTTAAAA+AGG | - | chr7_3:31763638-31763657 | None:intergenic | 10.0% |
| !!! | TTTAAAATTTAAATTCATGT+CGG | + | chr7_3:31763639-31763658 | Msa1101190:intron | 10.0% |
| !! | AATTTAATAGATATTAACTT+AGG | - | chr7_3:31764148-31764167 | None:intergenic | 10.0% |
| !!! | GCATAATATTTTAATCAAAT+TGG | + | chr7_3:31759462-31759481 | Msa1101190:five_prime_UTR | 15.0% |
| !!! | TAATGTTGAGTTTTATAATA+AGG | + | chr7_3:31759801-31759820 | Msa1101190:CDS | 15.0% |
| !!! | TGTTTTTTTTTTTTGTTACA+AGG | + | chr7_3:31760303-31760322 | Msa1101190:intron | 15.0% |
| !! | AAATAAAAAGTAAAAAGTCT+TGG | - | chr7_3:31760552-31760571 | None:intergenic | 15.0% |
| !!! | AGACTTTTTACTTTTTATTT+TGG | + | chr7_3:31760552-31760571 | Msa1101190:intron | 15.0% |
| !!! | TTTCGTATTTTAACTTTTTT+TGG | + | chr7_3:31760627-31760646 | Msa1101190:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr7_3:31761537-31761556 | None:intergenic | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | - | chr7_3:31761186-31761205 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | - | chr7_3:31761187-31761206 | None:intergenic | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | + | chr7_3:31761346-31761365 | Msa1101190:intron | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | + | chr7_3:31761465-31761484 | Msa1101190:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr7_3:31761537-31761556 | Msa1101190:intron | 15.0% |
| !!! | CTTTGATTTATATTTTGTTT+TGG | - | chr7_3:31761673-31761692 | None:intergenic | 15.0% |
| !! | AAACAAAATATAAATCAAAG+TGG | + | chr7_3:31761673-31761692 | Msa1101190:intron | 15.0% |
| !! | AATCAATGCTTATAAATTTA+AGG | - | chr7_3:31761959-31761978 | None:intergenic | 15.0% |
| !! | AACCTATAAATATATTGAAT+TGG | - | chr7_3:31762161-31762180 | None:intergenic | 15.0% |
| !! | ATAAAAAAGATTGTACTTAA+AGG | + | chr7_3:31762790-31762809 | Msa1101190:CDS | 15.0% |
| !! | TTTCTAAATTCTTCAATTTA+AGG | - | chr7_3:31763100-31763119 | None:intergenic | 15.0% |
| !!! | CAATGATTTTATTTTTTCTA+GGG | - | chr7_3:31763127-31763146 | None:intergenic | 15.0% |
| !!! | TCAATGATTTTATTTTTTCT+AGG | - | chr7_3:31763128-31763147 | None:intergenic | 15.0% |
| !!! | CTTTAAATCCTTTAATTTTA+GGG | - | chr7_3:31763183-31763202 | None:intergenic | 15.0% |
| !! | AGTTTGTAAAACAAAATATA+AGG | + | chr7_3:31763940-31763959 | Msa1101190:CDS | 15.0% |
| !! | TATATTGTTTCCATGATATT+GGG | - | chr7_3:31759647-31759666 | None:intergenic | 20.0% |
| !!! | TTTTGGAAATATTTTACGAT+TGG | - | chr7_3:31759674-31759693 | None:intergenic | 20.0% |
| !! | AATTAATTAACGCAGAATTA+TGG | + | chr7_3:31759867-31759886 | Msa1101190:intron | 20.0% |
| !!! | TTACAATGTCTTAATTTTGA+TGG | + | chr7_3:31760129-31760148 | Msa1101190:intron | 20.0% |
| !!! | ACAAACATGACAAATAATTT+TGG | - | chr7_3:31760261-31760280 | None:intergenic | 20.0% |
| !!! | TGAAATTTATATGATAATGC+AGG | + | chr7_3:31760694-31760713 | Msa1101190:intron | 20.0% |
| !!! | TTAAGGTTTTAACACTTTTT+TGG | + | chr7_3:31760806-31760825 | Msa1101190:intron | 20.0% |
| !!! | TATAGGGTTAATTATGTTTT+TGG | + | chr7_3:31761066-31761085 | Msa1101190:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | - | chr7_3:31761435-31761454 | None:intergenic | 20.0% |
| !!! | TAATGGGTTAATTATGTTTT+TGG | - | chr7_3:31761595-31761614 | None:intergenic | 20.0% |
| !!! | ATATATACATCAACTTTTCA+TGG | + | chr7_3:31761721-31761740 | Msa1101190:intron | 20.0% |
| !! | AAATCATTACTTTGATCTAT+AGG | + | chr7_3:31762134-31762153 | Msa1101190:intron | 20.0% |
| !! | AATCATTACTTTGATCTATA+GGG | + | chr7_3:31762135-31762154 | Msa1101190:intron | 20.0% |
| !! | CAATATATTTATAGGTTGTT+TGG | + | chr7_3:31762164-31762183 | Msa1101190:intron | 20.0% |
| !!! | CCTAAAGAAAATTTTATAGT+GGG | + | chr7_3:31762330-31762349 | Msa1101190:intron | 20.0% |
| !! | TAAACCACATTTAATTGAAT+CGG | + | chr7_3:31762360-31762379 | Msa1101190:intron | 20.0% |
| !!! | ATAGTTTTTTACCTAAAAAC+CGG | + | chr7_3:31762449-31762468 | Msa1101190:intron | 20.0% |
| !!! | AGTACAATCTTTTTTATGTA+TGG | - | chr7_3:31762787-31762806 | None:intergenic | 20.0% |
| !! | GGTTTAATTCTTAATATTCT+TGG | + | chr7_3:31762839-31762858 | Msa1101190:intron | 20.0% |
| !! | ACTGATCCAAAAAAATTATT+CGG | - | chr7_3:31763151-31763170 | None:intergenic | 20.0% |
| !! | AGTTTAATCCCTAAAATTAA+AGG | + | chr7_3:31763172-31763191 | Msa1101190:intron | 20.0% |
| !!! | GCTTTAAATCCTTTAATTTT+AGG | - | chr7_3:31763184-31763203 | None:intergenic | 20.0% |
| !!! | ATTAAAGGATTTAAAGCTAT+AGG | + | chr7_3:31763187-31763206 | Msa1101190:intron | 20.0% |
| !!! | TATAATCTCTAAAATTGCAT+GGG | - | chr7_3:31763292-31763311 | None:intergenic | 20.0% |
| !!! | ATATAATCTCTAAAATTGCA+TGG | - | chr7_3:31763293-31763312 | None:intergenic | 20.0% |
| !!! | TGCAATTTTAGAGATTATAT+TGG | + | chr7_3:31763293-31763312 | Msa1101190:intron | 20.0% |
| !!! | GCAATTTTAGAGATTATATT+GGG | + | chr7_3:31763294-31763313 | Msa1101190:intron | 20.0% |
| !!! | CCAATCATATGCTTATTTTT+AGG | - | chr7_3:31759426-31759445 | None:intergenic | 25.0% |
| ! | CCTAAAAATAAGCATATGAT+TGG | + | chr7_3:31759423-31759442 | Msa1101190:five_prime_UTR | 25.0% |
| ! | AAATAAGCATATGATTGGTA+AGG | + | chr7_3:31759428-31759447 | Msa1101190:five_prime_UTR | 25.0% |
| ! | TAGTTAGTTAGATGAATTGA+AGG | - | chr7_3:31759495-31759514 | None:intergenic | 25.0% |
| ! | GTATATTGTTTCCATGATAT+TGG | - | chr7_3:31759648-31759667 | None:intergenic | 25.0% |
| ! | AAGATGAATTTCTAATCACA+AGG | - | chr7_3:31760439-31760458 | None:intergenic | 25.0% |
| ! | AACTTCATTTCTCATGTTTA+AGG | + | chr7_3:31760789-31760808 | Msa1101190:intron | 25.0% |
| !!! | TTTTGCAATATTTTTTTCGG+AGG | + | chr7_3:31761384-31761403 | Msa1101190:intron | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | - | chr7_3:31761411-31761430 | None:intergenic | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | + | chr7_3:31761476-31761495 | Msa1101190:intron | 25.0% |
| !!! | GTATTGATTAAAATAGCCTT+TGG | + | chr7_3:31761621-31761640 | Msa1101190:intron | 25.0% |
| ! | AATCAAAGTGGTAATTGAAT+AGG | + | chr7_3:31761685-31761704 | Msa1101190:intron | 25.0% |
| ! | GGCCAATTCAATATATTTAT+AGG | + | chr7_3:31762156-31762175 | Msa1101190:intron | 25.0% |
| ! | AGTTTATAGAAACTACTAAG+TGG | - | chr7_3:31762265-31762284 | None:intergenic | 25.0% |
| !! | GCCTAAAGAAAATTTTATAG+TGG | + | chr7_3:31762329-31762348 | Msa1101190:intron | 25.0% |
| !! | CCCACTATAAAATTTTCTTT+AGG | - | chr7_3:31762333-31762352 | None:intergenic | 25.0% |
| !! | AAAACCGATTCAATTAAATG+TGG | - | chr7_3:31762367-31762386 | None:intergenic | 25.0% |
| !! | AACGGCATAAATTTTATCTA+TGG | + | chr7_3:31762421-31762440 | Msa1101190:intron | 25.0% |
| !!! | TTTTTTTTTATCGTGTAGCA+GGG | - | chr7_3:31762496-31762515 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTATCGTGTAGC+AGG | - | chr7_3:31762497-31762516 | None:intergenic | 25.0% |
| ! | CTACTCTATCCAAAAAAAAT+TGG | - | chr7_3:31762566-31762585 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTGGATAGAGTAG+CGG | + | chr7_3:31762566-31762585 | Msa1101190:intron | 25.0% |
| !! | TAGGAAAGAACTTTTCAAAT+TGG | - | chr7_3:31762594-31762613 | None:intergenic | 25.0% |
| !! | GTGACAATTAACTATGTTTT+GGG | + | chr7_3:31762634-31762653 | Msa1101190:CDS | 25.0% |
| !!! | TAACTATGTTTTGGGAAATT+TGG | + | chr7_3:31762642-31762661 | Msa1101190:CDS | 25.0% |
| !!! | AACTATGTTTTGGGAAATTT+GGG | + | chr7_3:31762643-31762662 | Msa1101190:CDS | 25.0% |
| !!! | GAAATTTTGAAAGTCACTAA+TGG | + | chr7_3:31762976-31762995 | Msa1101190:CDS | 25.0% |
| ! | TACACATTTGATAAAATGCT+AGG | + | chr7_3:31763059-31763078 | Msa1101190:intron | 25.0% |
| ! | ACACATTTGATAAAATGCTA+GGG | + | chr7_3:31763060-31763079 | Msa1101190:intron | 25.0% |
| !!! | CATTGACCGAATAATTTTTT+TGG | + | chr7_3:31763142-31763161 | Msa1101190:intron | 25.0% |
| ! | ATGCAAAGAGATAATTCTTA+AGG | + | chr7_3:31763472-31763491 | Msa1101190:CDS | 25.0% |
| ! | AAATTGAACTTGAATCTAGA+CGG | - | chr7_3:31763710-31763729 | None:intergenic | 25.0% |
| !!! | AAAATAGGCATTTTTTGAAC+TGG | + | chr7_3:31763752-31763771 | Msa1101190:intron | 25.0% |
| ! | AATATTAGTAGAAGTTCGTT+AGG | - | chr7_3:31763833-31763852 | None:intergenic | 25.0% |
| !!! | AATATTGTTTCTACATGTGT+AGG | + | chr7_3:31763847-31763866 | Msa1101190:intron | 25.0% |
| !!! | TTGATACGAATTTTGGAATT+GGG | - | chr7_3:31763896-31763915 | None:intergenic | 25.0% |
| ! | AACATACCTATAGTATTCTT+AGG | + | chr7_3:31764119-31764138 | Msa1101190:intron | 25.0% |
| !!! | ATATTCAATTTGATTTGCCA+CGG | - | chr7_3:31764223-31764242 | None:intergenic | 25.0% |
| ! | TACATGAAACGATCAAATTT+GGG | - | chr7_3:31764309-31764328 | None:intergenic | 25.0% |
| ! | TAAGCTTCTAGATTTAAACT+TGG | + | chr7_3:31764339-31764358 | Msa1101190:exon | 25.0% |
| ! | AAGCTTCTAGATTTAAACTT+GGG | + | chr7_3:31764340-31764359 | Msa1101190:exon | 25.0% |
| !!! | TAGCACAACTCTTATTTTAT+TGG | - | chr7_3:31764393-31764412 | None:intergenic | 25.0% |
| TATGCTAGTTGTGTTATAAC+CGG | + | chr7_3:31759519-31759538 | Msa1101190:five_prime_UTR | 30.0% | |
| ! | GATCTAAGTTCTGATCAAAA+TGG | - | chr7_3:31759765-31759784 | None:intergenic | 30.0% |
| AACTTAGATCTTCTTCACAT+TGG | + | chr7_3:31759775-31759794 | Msa1101190:CDS | 30.0% | |
| !!! | GCTTATGGTTGTGTTTTTTT+TGG | + | chr7_3:31760217-31760236 | Msa1101190:intron | 30.0% |
| GAATTCTTCCGAATTGATAT+TGG | + | chr7_3:31760745-31760764 | Msa1101190:CDS | 30.0% | |
| ! | ATTATTGATGGTACTCAAGA+AGG | + | chr7_3:31760926-31760945 | Msa1101190:CDS | 30.0% |
| ! | TCAAGAAGGTTCTTATTTGT+GGG | + | chr7_3:31760940-31760959 | Msa1101190:CDS | 30.0% |
| ! | TACAAGGTTGCAATTTTGTA+GGG | - | chr7_3:31761093-31761112 | None:intergenic | 30.0% |
| ! | TTACAAGGTTGCAATTTTGT+AGG | - | chr7_3:31761094-31761113 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | - | chr7_3:31761552-31761571 | None:intergenic | 30.0% | |
| ! | CAAGTTTAGAACACTATGAA+CGG | + | chr7_3:31761249-31761268 | Msa1101190:intron | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | + | chr7_3:31761507-31761526 | Msa1101190:intron | 30.0% |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | + | chr7_3:31761508-31761527 | Msa1101190:intron | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | + | chr7_3:31761552-31761571 | Msa1101190:intron | 30.0% | |
| TACCAATTCTCAAAAACCAA+AGG | - | chr7_3:31761640-31761659 | None:intergenic | 30.0% | |
| ! | GTTATCTTGAAGAGTTGTTT+TGG | + | chr7_3:31761850-31761869 | Msa1101190:intron | 30.0% |
| CTTTAGCATTTCTTATGCTT+GGG | + | chr7_3:31761874-31761893 | Msa1101190:intron | 30.0% | |
| TTTAGCATTTCTTATGCTTG+GGG | + | chr7_3:31761875-31761894 | Msa1101190:intron | 30.0% | |
| ATCTCAATATGTGTTTGGTA+GGG | - | chr7_3:31762309-31762328 | None:intergenic | 30.0% | |
| AACAAGTCTTCTAACTTGAA+CGG | + | chr7_3:31762403-31762422 | Msa1101190:intron | 30.0% | |
| !!! | TTTTTTTTATCGTGTAGCAG+GGG | - | chr7_3:31762495-31762514 | None:intergenic | 30.0% |
| ! | GGTGACAATTAACTATGTTT+TGG | + | chr7_3:31762633-31762652 | Msa1101190:intron | 30.0% |
| !! | AAAAGATTTTTCAGAGACAG+TGG | + | chr7_3:31762666-31762685 | Msa1101190:CDS | 30.0% |
| AATATTACCTCTATGTTCAC+AGG | + | chr7_3:31762818-31762837 | Msa1101190:CDS | 30.0% | |
| AATTAAACCTGTGAACATAG+AGG | - | chr7_3:31762828-31762847 | None:intergenic | 30.0% | |
| ! | AGGATTTAAAGCTATAGGAT+AGG | + | chr7_3:31763192-31763211 | Msa1101190:intron | 30.0% |
| TTAAAGCTATAGGATAGGAT+AGG | + | chr7_3:31763197-31763216 | Msa1101190:intron | 30.0% | |
| ! | ATTGCATGGGTTATACAATT+TGG | - | chr7_3:31763279-31763298 | None:intergenic | 30.0% |
| CACAAACCATTCTTATAACA+TGG | + | chr7_3:31763362-31763381 | Msa1101190:intron | 30.0% | |
| AAAGGTCCATGTTATAAGAA+TGG | - | chr7_3:31763371-31763390 | None:intergenic | 30.0% | |
| !!! | GGACCTTTTTTATTCTTCAA+AGG | + | chr7_3:31763383-31763402 | Msa1101190:intron | 30.0% |
| ! | GTGCCTTTGAAGAATAAAAA+AGG | - | chr7_3:31763389-31763408 | None:intergenic | 30.0% |
| ! | AAAGGCACATATACATATTC+AGG | + | chr7_3:31763401-31763420 | Msa1101190:intron | 30.0% |
| TCTTTGCATTCATCAATGTT+GGG | - | chr7_3:31763461-31763480 | None:intergenic | 30.0% | |
| AATTTCTCTCATCACACATT+TGG | - | chr7_3:31763804-31763823 | None:intergenic | 30.0% | |
| !!! | ATTTTGGAATTGGGCTTATT+TGG | - | chr7_3:31763887-31763906 | None:intergenic | 30.0% |
| !!! | CTTGATACGAATTTTGGAAT+TGG | - | chr7_3:31763897-31763916 | None:intergenic | 30.0% |
| CAATTCCAAAATTCGTATCA+AGG | + | chr7_3:31763895-31763914 | Msa1101190:CDS | 30.0% | |
| CTCAAAAATAAGTGGATATG+TGG | - | chr7_3:31763975-31763994 | None:intergenic | 30.0% | |
| !!! | CACATATCCACTTATTTTTG+AGG | + | chr7_3:31763973-31763992 | Msa1101190:CDS | 30.0% |
| AGACTATCCTCAAAAATAAG+TGG | - | chr7_3:31763983-31764002 | None:intergenic | 30.0% | |
| CATCAACAAACAACGTATAT+TGG | - | chr7_3:31764033-31764052 | None:intergenic | 30.0% | |
| ! | CAATATACGTTGTTTGTTGA+TGG | + | chr7_3:31764031-31764050 | Msa1101190:CDS | 30.0% |
| GTACATGAAACGATCAAATT+TGG | - | chr7_3:31764310-31764329 | None:intergenic | 30.0% | |
| ! | GAAGGGAAACTATTTGAAAC+CGG | - | chr7_3:31759541-31759560 | None:intergenic | 35.0% |
| ATTGTTTCCATGATATTGGG+AGG | - | chr7_3:31759644-31759663 | None:intergenic | 35.0% | |
| !! | GAGGTTAGAGTTTCTTGTTT+TGG | - | chr7_3:31759691-31759710 | None:intergenic | 35.0% |
| CAAAATGGTAGACATGAACA+CGG | - | chr7_3:31759750-31759769 | None:intergenic | 35.0% | |
| ! | CTCACTAGTTTCATAGCTTA+TGG | + | chr7_3:31760202-31760221 | Msa1101190:intron | 35.0% |
| TTCCGAATTGATATTGGAAG+CGG | + | chr7_3:31760751-31760770 | Msa1101190:CDS | 35.0% | |
| TACCGCTTCCAATATCAATT+CGG | - | chr7_3:31760756-31760775 | None:intergenic | 35.0% | |
| AGCTTTCATTTCCACATCTT+AGG | + | chr7_3:31760847-31760866 | Msa1101190:intron | 35.0% | |
| GATGCAGTAGGAATTATTGA+TGG | + | chr7_3:31760914-31760933 | Msa1101190:CDS | 35.0% | |
| ! | CTCAAGAAGGTTCTTATTTG+TGG | + | chr7_3:31760939-31760958 | Msa1101190:CDS | 35.0% |
| !!! | TGTTTTTGGTCCCTACAAAA+TGG | - | chr7_3:31761080-31761099 | None:intergenic | 35.0% |
| !!! | AGCCTTTGGTTTTTGAGAAT+TGG | + | chr7_3:31761635-31761654 | Msa1101190:intron | 35.0% |
| CCAAGCATAAGAAATGCTAA+AGG | - | chr7_3:31761876-31761895 | None:intergenic | 35.0% | |
| CCTTTAGCATTTCTTATGCT+TGG | + | chr7_3:31761873-31761892 | Msa1101190:intron | 35.0% | |
| CATCTCAATATGTGTTTGGT+AGG | - | chr7_3:31762310-31762329 | None:intergenic | 35.0% | |
| TAGGCATCTCAATATGTGTT+TGG | - | chr7_3:31762314-31762333 | None:intergenic | 35.0% | |
| !!! | TGAGATTTGTACCGGTTTTT+AGG | - | chr7_3:31762463-31762482 | None:intergenic | 35.0% |
| !!! | GCAGCGAAACCAATTTTTTT+TGG | + | chr7_3:31762554-31762573 | Msa1101190:intron | 35.0% |
| TACACAAATGTTGCAAGGTT+AGG | - | chr7_3:31762613-31762632 | None:intergenic | 35.0% | |
| TAACCTTGCAACATTTGTGT+AGG | + | chr7_3:31762612-31762631 | Msa1101190:intron | 35.0% | |
| TCTTTCAGTTATTTGCGCTT+TGG | + | chr7_3:31762934-31762953 | Msa1101190:intron | 35.0% | |
| CACATATACATATTCAGGAG+AGG | + | chr7_3:31763406-31763425 | Msa1101190:CDS | 35.0% | |
| ! | ATATTCAGGAGAGGAGTATA+AGG | + | chr7_3:31763415-31763434 | Msa1101190:CDS | 35.0% |
| CTTTGCATTCATCAATGTTG+GGG | - | chr7_3:31763460-31763479 | None:intergenic | 35.0% | |
| CTCTTTGCATTCATCAATGT+TGG | - | chr7_3:31763462-31763481 | None:intergenic | 35.0% | |
| TGAATGATCCATGTCCATAT+GGG | + | chr7_3:31763504-31763523 | Msa1101190:CDS | 35.0% | |
| ! | CCAAAAGTACATTTCCCATA+TGG | - | chr7_3:31763521-31763540 | None:intergenic | 35.0% |
| ! | CCATATGGGAAATGTACTTT+TGG | + | chr7_3:31763518-31763537 | Msa1101190:CDS | 35.0% |
| ! | TATGGGAAATGTACTTTTGG+TGG | + | chr7_3:31763521-31763540 | Msa1101190:CDS | 35.0% |
| ! | ATGGGAAATGTACTTTTGGT+GGG | + | chr7_3:31763522-31763541 | Msa1101190:CDS | 35.0% |
| ! | AATGTACTTTTGGTGGGATA+TGG | + | chr7_3:31763528-31763547 | Msa1101190:CDS | 35.0% |
| ! | TCATTTTATTACGTGCCTAC+AGG | + | chr7_3:31763596-31763615 | Msa1101190:CDS | 35.0% |
| ! | CATTTTATTACGTGCCTACA+GGG | + | chr7_3:31763597-31763616 | Msa1101190:CDS | 35.0% |
| ! | ATTTTATTACGTGCCTACAG+GGG | + | chr7_3:31763598-31763617 | Msa1101190:CDS | 35.0% |
| ! | CAGATCCTTGATACGAATTT+TGG | - | chr7_3:31763903-31763922 | None:intergenic | 35.0% |
| AATAAGTGGATATGTGGCTT+TGG | - | chr7_3:31763969-31763988 | None:intergenic | 35.0% | |
| ATAAGATCCAAGCATGCATA+TGG | - | chr7_3:31764007-31764026 | None:intergenic | 35.0% | |
| !! | ACGTTGTTTGTTGATGGATT+TGG | + | chr7_3:31764037-31764056 | Msa1101190:CDS | 35.0% |
| AGGTTGCCTAAGAATACTAT+AGG | - | chr7_3:31764128-31764147 | None:intergenic | 35.0% | |
| ! | AAACATCTATTTGTTGACGC+AGG | + | chr7_3:31764174-31764193 | Msa1101190:intron | 35.0% |
| TGAATATCAAGATGCAGTTG+TGG | + | chr7_3:31764236-31764255 | Msa1101190:CDS | 35.0% | |
| CACAATGATACAAATGAGAG+TGG | - | chr7_3:31764433-31764452 | None:intergenic | 35.0% | |
| !! | TCCATGCTTGTTGTAGTATG+TGG | - | chr7_3:31759571-31759590 | None:intergenic | 40.0% |
| TATTGGGAGGAAGAGATTGT+AGG | - | chr7_3:31759631-31759650 | None:intergenic | 40.0% | |
| ATCTCTTCCTCCCAATATCA+TGG | + | chr7_3:31759634-31759653 | Msa1101190:CDS | 40.0% | |
| !! | CTTTCTGCTTGCTCTAAAAG+TGG | - | chr7_3:31760053-31760072 | None:intergenic | 40.0% |
| ! | TTTAGAGCAAGCAGAAAGAG+TGG | + | chr7_3:31760055-31760074 | Msa1101190:CDS | 40.0% |
| AAAACCAACCCCAAGCTTAA+CGG | - | chr7_3:31760108-31760127 | None:intergenic | 40.0% | |
| !! | AACAGCAGGTTTAAGGCTTT+TGG | + | chr7_3:31760718-31760737 | Msa1101190:CDS | 40.0% |
| !! | CAGGTTTAAGGCTTTTGGAT+GGG | + | chr7_3:31760723-31760742 | Msa1101190:CDS | 40.0% |
| AACGTACAATCTGATGCAGT+AGG | + | chr7_3:31760902-31760921 | Msa1101190:CDS | 40.0% | |
| !! | TTACAAGGTCGCCATTTTGT+AGG | + | chr7_3:31761567-31761586 | Msa1101190:intron | 40.0% |
| !! | TACAAGGTCGCCATTTTGTA+GGG | + | chr7_3:31761568-31761587 | Msa1101190:intron | 40.0% |
| !! | TGAGTGCAGTTGTTTGCTAT+AGG | + | chr7_3:31762072-31762091 | Msa1101190:intron | 40.0% |
| ATAGGAGACATACTGATGTG+TGG | + | chr7_3:31762090-31762109 | Msa1101190:intron | 40.0% | |
| ACTCCAACTCAGGTTTAGAA+TGG | + | chr7_3:31762201-31762220 | Msa1101190:intron | 40.0% | |
| TTTCGCTGTGAGATTTGTAC+CGG | - | chr7_3:31762471-31762490 | None:intergenic | 40.0% | |
| TCACCTACACAAATGTTGCA+AGG | - | chr7_3:31762618-31762637 | None:intergenic | 40.0% | |
| CCAGCTAAAATGCAAGGATT+AGG | - | chr7_3:31763006-31763025 | None:intergenic | 40.0% | |
| !! | CCTAATCCTTGCATTTTAGC+TGG | + | chr7_3:31763003-31763022 | Msa1101190:CDS | 40.0% |
| TGATAGCCAGCTAAAATGCA+AGG | - | chr7_3:31763012-31763031 | None:intergenic | 40.0% | |
| !!! | TGCATTTTAGCTGGCTATCA+TGG | + | chr7_3:31763012-31763031 | Msa1101190:CDS | 40.0% |
| GCTATAGGATAGGATAGGAT+AGG | + | chr7_3:31763202-31763221 | Msa1101190:intron | 40.0% | |
| GTGAATGATCCATGTCCATA+TGG | + | chr7_3:31763503-31763522 | Msa1101190:CDS | 40.0% | |
| GTACATTTCCCATATGGACA+TGG | - | chr7_3:31763515-31763534 | None:intergenic | 40.0% | |
| ! | ACTTTTGGTGGGATATGGAA+CGG | + | chr7_3:31763533-31763552 | Msa1101190:CDS | 40.0% |
| TAGCAGATATATACCCCTGT+AGG | - | chr7_3:31763614-31763633 | None:intergenic | 40.0% | |
| GACGGTCTATTCTGATCAAA+TGG | - | chr7_3:31763692-31763711 | None:intergenic | 40.0% | |
| CGTATCAAGGATCTGAAAAC+TGG | + | chr7_3:31763908-31763927 | Msa1101190:CDS | 40.0% | |
| TAGTCTTCCATATGCATGCT+TGG | + | chr7_3:31763997-31764016 | Msa1101190:CDS | 40.0% | |
| TAATCTCTTGCAATGGGTCT+AGG | - | chr7_3:31764200-31764219 | None:intergenic | 40.0% | |
| CAAATAGTTTCCCTTCCCAC+TGG | + | chr7_3:31759545-31759564 | Msa1101190:five_prime_UTR | 45.0% | |
| TGTTGTAGTATGTGGCCAGT+GGG | - | chr7_3:31759563-31759582 | None:intergenic | 45.0% | |
| TTGTTGTAGTATGTGGCCAG+TGG | - | chr7_3:31759564-31759583 | None:intergenic | 45.0% | |
| GCCACATACTACAACAAGCA+TGG | + | chr7_3:31759567-31759586 | Msa1101190:exon | 45.0% | |
| TTCATGTTGTAGACAACGCC+CGG | + | chr7_3:31759978-31759997 | Msa1101190:intron | 45.0% | |
| ATCTGCGTATGCACTCAAAC+CGG | - | chr7_3:31760000-31760019 | None:intergenic | 45.0% | |
| TGCATACGCAGATAATCCGA+AGG | + | chr7_3:31760007-31760026 | Msa1101190:CDS | 45.0% | |
| !! | CCAAGCTTAACGGGTGTTTT+GGG | - | chr7_3:31760098-31760117 | None:intergenic | 45.0% |
| CCAAAACACCCGTTAAGCTT+GGG | + | chr7_3:31760096-31760115 | Msa1101190:CDS | 45.0% | |
| CAAAACACCCGTTAAGCTTG+GGG | + | chr7_3:31760097-31760116 | Msa1101190:CDS | 45.0% | |
| AAACCAACCCCAAGCTTAAC+GGG | - | chr7_3:31760107-31760126 | None:intergenic | 45.0% | |
| ! | ATGATAATGCAGGCAACAGC+AGG | + | chr7_3:31760704-31760723 | Msa1101190:intron | 45.0% |
| !! | GCAGGTTTAAGGCTTTTGGA+TGG | + | chr7_3:31760722-31760741 | Msa1101190:CDS | 45.0% |
| CAAACTCGACACCTAAGATG+TGG | - | chr7_3:31760861-31760880 | None:intergenic | 45.0% | |
| ! | TAAGGGGACACGTATTGATG+TGG | + | chr7_3:31761799-31761818 | Msa1101190:intron | 45.0% |
| TTGATGTGGATGTGCTTAGC+AGG | + | chr7_3:31761813-31761832 | Msa1101190:intron | 45.0% | |
| ! | GGATGTGCTTAGCAGGATTT+TGG | + | chr7_3:31761820-31761839 | Msa1101190:intron | 45.0% |
| GACATACTGATGTGTGGATG+TGG | + | chr7_3:31762096-31762115 | Msa1101190:intron | 45.0% | |
| GATGTGTGGATGTGGTTAAG+AGG | + | chr7_3:31762104-31762123 | Msa1101190:intron | 45.0% | |
| ACGTCTATCTACTCCAACTC+AGG | + | chr7_3:31762191-31762210 | Msa1101190:intron | 45.0% | |
| ! | GTGCCATTCTAAACCTGAGT+TGG | - | chr7_3:31762207-31762226 | None:intergenic | 45.0% |
| GTGTTTGGTAGGGCGTATAT+TGG | - | chr7_3:31762299-31762318 | None:intergenic | 45.0% | |
| AAAGCTCCACAAGTACCTCA+AGG | + | chr7_3:31762754-31762773 | Msa1101190:CDS | 45.0% | |
| ATGTATGGATCCTCTCCTTG+AGG | - | chr7_3:31762772-31762791 | None:intergenic | 45.0% | |
| !! | AAGGCATTTTCCACTGCTTC+TGG | + | chr7_3:31763434-31763453 | Msa1101190:CDS | 45.0% |
| CCACGGTAATCTCTTGCAAT+GGG | - | chr7_3:31764206-31764225 | None:intergenic | 45.0% | |
| GCTTCTATTGCATTGCCTAG+AGG | - | chr7_3:31764273-31764292 | None:intergenic | 45.0% | |
| !! | ATTAAAATTAAAATAATAAG+GGG | + | chr7_3:31761783-31761802 | Msa1101190:intron | 5.0% |
| !!! | AAACAAATTTTTTTTTTTTT+TGG | - | chr7_3:31762053-31762072 | None:intergenic | 5.0% |
| !! | TATAAAACAAAAATTAAAAT+AGG | + | chr7_3:31763737-31763756 | Msa1101190:intron | 5.0% |
| TAGTATGTGGCCAGTGGGAA+GGG | - | chr7_3:31759558-31759577 | None:intergenic | 50.0% | |
| ATCAAAGACGACAGCGTACG+AGG | - | chr7_3:31759710-31759729 | None:intergenic | 50.0% | |
| TACGCTGTCGTCTTTGATGC+TGG | + | chr7_3:31759712-31759731 | Msa1101190:CDS | 50.0% | |
| GTCTTTGATGCTGGTAGCAC+CGG | + | chr7_3:31759721-31759740 | Msa1101190:CDS | 50.0% | |
| GTAGACATGAACACGGCTAC+CGG | - | chr7_3:31759743-31759762 | None:intergenic | 50.0% | |
| TCTGCGTATGCACTCAAACC+GGG | - | chr7_3:31759999-31760018 | None:intergenic | 50.0% | |
| ! | AGAGACTCTGCTGCTTCCTT+CGG | - | chr7_3:31760026-31760045 | None:intergenic | 50.0% |
| !! | GTTTTGGGCTGCAGATTCAC+AGG | - | chr7_3:31760083-31760102 | None:intergenic | 50.0% |
| CCCAAAACACCCGTTAAGCT+TGG | + | chr7_3:31760095-31760114 | Msa1101190:CDS | 50.0% | |
| !! | CCCAAGCTTAACGGGTGTTT+TGG | - | chr7_3:31760099-31760118 | None:intergenic | 50.0% |
| TGCAGGCAACAGCAGGTTTA+AGG | + | chr7_3:31760711-31760730 | Msa1101190:intron | 50.0% | |
| ACAGTGGCAGTAGCTGATCT+TGG | + | chr7_3:31762682-31762701 | Msa1101190:CDS | 50.0% | |
| TGGCAGTAGCTGATCTTGGA+GGG | + | chr7_3:31762686-31762705 | Msa1101190:CDS | 50.0% | |
| TGGAGGGGGATCAGTTCAAA+TGG | + | chr7_3:31762702-31762721 | Msa1101190:CDS | 50.0% | |
| TCCACAAGTACCTCAAGGAG+AGG | + | chr7_3:31762759-31762778 | Msa1101190:CDS | 50.0% | |
| ! | TCCTCTCCTTGAGGTACTTG+TGG | - | chr7_3:31762763-31762782 | None:intergenic | 50.0% |
| TTTGGTGGGATATGGAACGG+TGG | + | chr7_3:31763536-31763555 | Msa1101190:CDS | 50.0% | |
| CCCATTGCAAGAGATTACCG+TGG | + | chr7_3:31764203-31764222 | Msa1101190:CDS | 50.0% | |
| GCCACGGTAATCTCTTGCAA+TGG | - | chr7_3:31764207-31764226 | None:intergenic | 50.0% | |
| ATGCAGTTGTGGATGCAGCA+TGG | + | chr7_3:31764247-31764266 | Msa1101190:CDS | 50.0% | |
| GTAGTATGTGGCCAGTGGGA+AGG | - | chr7_3:31759559-31759578 | None:intergenic | 55.0% | |
| ACACCCGTTAAGCTTGGGGT+TGG | + | chr7_3:31760101-31760120 | Msa1101190:intron | 55.0% | |
| GTGGCAGTAGCTGATCTTGG+AGG | + | chr7_3:31762685-31762704 | Msa1101190:CDS | 55.0% | |
| GGCAGTAGCTGATCTTGGAG+GGG | + | chr7_3:31762687-31762706 | Msa1101190:CDS | 55.0% | |
| GCAGTAGCTGATCTTGGAGG+GGG | + | chr7_3:31762688-31762707 | Msa1101190:CDS | 55.0% | |
| AATGTTGGGGCCAGAAGCAG+TGG | - | chr7_3:31763447-31763466 | None:intergenic | 55.0% | |
| GGTGGGATATGGAACGGTGG+AGG | + | chr7_3:31763539-31763558 | Msa1101190:CDS | 60.0% | |
| GGGATATGGAACGGTGGAGG+AGG | + | chr7_3:31763542-31763561 | Msa1101190:CDS | 60.0% | |
| TGGAACGGTGGAGGAGGAAG+TGG | + | chr7_3:31763548-31763567 | Msa1101190:CDS | 60.0% | |
| GGAACGGTGGAGGAGGAAGT+GGG | + | chr7_3:31763549-31763568 | Msa1101190:CDS | 60.0% | |
| GTGGATGCAGCATGGCCTCT+AGG | + | chr7_3:31764255-31764274 | Msa1101190:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 31759379 | 31764482 | 31759379 | ID=Msa1101190;Name=Msa1101190 |
| chr7_3 | mRNA | 31759379 | 31764482 | 31759379 | ID=Msa1101190-mRNA-1;Parent=Msa1101190;Name=Msa1101190-mRNA-1;_AED=0.09;_eAED=0.09;_QI=207|0.87|0.88|1|1|1|9|141|454 |
| chr7_3 | exon | 31759379 | 31759822 | 31759379 | ID=Msa1101190-mRNA-1:exon:6775;Parent=Msa1101190-mRNA-1 |
| chr7_3 | exon | 31759990 | 31760118 | 31759990 | ID=Msa1101190-mRNA-1:exon:6776;Parent=Msa1101190-mRNA-1 |
| chr7_3 | exon | 31760716 | 31760772 | 31760716 | ID=Msa1101190-mRNA-1:exon:6777;Parent=Msa1101190-mRNA-1 |
| chr7_3 | exon | 31760869 | 31760961 | 31760869 | ID=Msa1101190-mRNA-1:exon:6778;Parent=Msa1101190-mRNA-1 |
| chr7_3 | exon | 31762634 | 31762839 | 31762634 | ID=Msa1101190-mRNA-1:exon:6779;Parent=Msa1101190-mRNA-1 |
| chr7_3 | exon | 31762942 | 31763033 | 31762942 | ID=Msa1101190-mRNA-1:exon:6780;Parent=Msa1101190-mRNA-1 |
| chr7_3 | exon | 31763405 | 31763619 | 31763405 | ID=Msa1101190-mRNA-1:exon:6781;Parent=Msa1101190-mRNA-1 |
| chr7_3 | exon | 31763869 | 31764058 | 31763869 | ID=Msa1101190-mRNA-1:exon:6782;Parent=Msa1101190-mRNA-1 |
| chr7_3 | exon | 31764196 | 31764482 | 31764196 | ID=Msa1101190-mRNA-1:exon:6783;Parent=Msa1101190-mRNA-1 |
| chr7_3 | five_prime_UTR | 31759379 | 31759585 | 31759379 | ID=Msa1101190-mRNA-1:five_prime_utr;Parent=Msa1101190-mRNA-1 |
| chr7_3 | CDS | 31759586 | 31759822 | 31759586 | ID=Msa1101190-mRNA-1:cds;Parent=Msa1101190-mRNA-1 |
| chr7_3 | CDS | 31759990 | 31760118 | 31759990 | ID=Msa1101190-mRNA-1:cds;Parent=Msa1101190-mRNA-1 |
| chr7_3 | CDS | 31760716 | 31760772 | 31760716 | ID=Msa1101190-mRNA-1:cds;Parent=Msa1101190-mRNA-1 |
| chr7_3 | CDS | 31760869 | 31760961 | 31760869 | ID=Msa1101190-mRNA-1:cds;Parent=Msa1101190-mRNA-1 |
| chr7_3 | CDS | 31762634 | 31762839 | 31762634 | ID=Msa1101190-mRNA-1:cds;Parent=Msa1101190-mRNA-1 |
| chr7_3 | CDS | 31762942 | 31763033 | 31762942 | ID=Msa1101190-mRNA-1:cds;Parent=Msa1101190-mRNA-1 |
| chr7_3 | CDS | 31763405 | 31763619 | 31763405 | ID=Msa1101190-mRNA-1:cds;Parent=Msa1101190-mRNA-1 |
| chr7_3 | CDS | 31763869 | 31764058 | 31763869 | ID=Msa1101190-mRNA-1:cds;Parent=Msa1101190-mRNA-1 |
| chr7_3 | CDS | 31764196 | 31764341 | 31764196 | ID=Msa1101190-mRNA-1:cds;Parent=Msa1101190-mRNA-1 |
| chr7_3 | three_prime_UTR | 31764342 | 31764482 | 31764342 | ID=Msa1101190-mRNA-1:three_prime_utr;Parent=Msa1101190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
