Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031430 | BAM84273.1 | 87.356 | 261 | 27 | 2 | 3 | 257 | 194 | 454 | 1.51e-147 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031430 | sp|P52914|NTPA_PEA | 60.769 | 260 | 95 | 3 | 4 | 256 | 195 | 454 | 3.20e-100 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031430 | M1VNS8 | 87.356 | 261 | 27 | 2 | 3 | 257 | 194 | 454 | 7.19e-148 | 430 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036150 | Msa1031430 | 0.805674 | 1.191298e-49 | -8.615850e-47 |
| Msa0044320 | Msa1031430 | 0.804698 | 1.906153e-49 | -8.615850e-47 |
| Msa0046410 | Msa1031430 | 0.800549 | 1.368340e-48 | -8.615850e-47 |
| Msa0047230 | Msa1031430 | 0.824336 | 8.532018e-54 | -8.615850e-47 |
| Msa0056160 | Msa1031430 | 0.800801 | 1.215631e-48 | -8.615850e-47 |
| Msa0072710 | Msa1031430 | 0.821129 | 4.757648e-53 | -8.615850e-47 |
| Msa0114960 | Msa1031430 | 0.805408 | 1.354072e-49 | -8.615850e-47 |
| Msa0607440 | Msa1031430 | 0.809812 | 1.572263e-50 | -8.615850e-47 |
| Msa0615430 | Msa1031430 | 0.827767 | 1.304045e-54 | -8.615850e-47 |
| Msa0618260 | Msa1031430 | 0.840275 | 9.593503e-58 | -8.615850e-47 |
| Msa0639880 | Msa1031430 | 0.821968 | 3.044606e-53 | -8.615850e-47 |
| Msa0645780 | Msa1031430 | 0.820653 | 6.121580e-53 | -8.615850e-47 |
| Msa0654880 | Msa1031430 | 0.827153 | 1.831150e-54 | -8.615850e-47 |
| Msa0657820 | Msa1031430 | 0.831557 | 1.560164e-55 | -8.615850e-47 |
| Msa0657860 | Msa1031430 | 0.815705 | 8.062851e-52 | -8.615850e-47 |
| Msa0677590 | Msa1031430 | 0.804761 | 1.849818e-49 | -8.615850e-47 |
| Msa0698480 | Msa1031430 | 0.833050 | 6.661595e-56 | -8.615850e-47 |
| Msa0698650 | Msa1031430 | 0.827656 | 1.386855e-54 | -8.615850e-47 |
| Msa0714020 | Msa1031430 | 0.800253 | 1.571519e-48 | -8.615850e-47 |
| Msa0714160 | Msa1031430 | 0.800127 | 1.667031e-48 | -8.615850e-47 |
| Msa0726000 | Msa1031430 | 0.810359 | 1.198690e-50 | -8.615850e-47 |
| Msa0749900 | Msa1031430 | 0.805193 | 1.502374e-49 | -8.615850e-47 |
| Msa0766030 | Msa1031430 | 0.810559 | 1.085343e-50 | -8.615850e-47 |
| Msa0829430 | Msa1031430 | 0.807707 | 4.431252e-50 | -8.615850e-47 |
| Msa0830120 | Msa1031430 | 0.806807 | 6.875919e-50 | -8.615850e-47 |
| Msa0830450 | Msa1031430 | 0.807277 | 5.467218e-50 | -8.615850e-47 |
| Msa0841980 | Msa1031430 | 0.815396 | 9.447341e-52 | -8.615850e-47 |
| Msa0842050 | Msa1031430 | 0.837686 | 4.490724e-57 | -8.615850e-47 |
| Msa0123900 | Msa1031430 | 0.807733 | 4.375076e-50 | -8.615850e-47 |
| Msa0127210 | Msa1031430 | 0.800850 | 1.187767e-48 | -8.615850e-47 |
| Msa0153640 | Msa1031430 | 0.803279 | 3.760261e-49 | -8.615850e-47 |
| Msa0164630 | Msa1031430 | 0.841269 | 5.265045e-58 | -8.615850e-47 |
| Msa0206600 | Msa1031430 | 0.819705 | 1.009222e-52 | -8.615850e-47 |
| Msa0210870 | Msa1031430 | 0.839761 | 1.305692e-57 | -8.615850e-47 |
| Msa0217470 | Msa1031430 | 0.802540 | 5.344915e-49 | -8.615850e-47 |
| Msa0365360 | Msa1031430 | 0.815790 | 7.716057e-52 | -8.615850e-47 |
| Msa0367310 | Msa1031430 | 0.830079 | 3.593321e-55 | -8.615850e-47 |
| Msa0381990 | Msa1031430 | 0.812375 | 4.376281e-51 | -8.615850e-47 |
| Msa0389060 | Msa1031430 | 0.801405 | 9.143716e-49 | -8.615850e-47 |
| Msa0390840 | Msa1031430 | 0.837474 | 5.087250e-57 | -8.615850e-47 |
| Msa0402640 | Msa1031430 | 0.811413 | 7.089116e-51 | -8.615850e-47 |
| Msa0409000 | Msa1031430 | 0.817485 | 3.217503e-52 | -8.615850e-47 |
| Msa0413040 | Msa1031430 | 0.819074 | 1.405350e-52 | -8.615850e-47 |
| Msa0423600 | Msa1031430 | 0.805396 | 1.362220e-49 | -8.615850e-47 |
| Msa0452010 | Msa1031430 | 0.806744 | 7.088158e-50 | -8.615850e-47 |
| Msa0459920 | Msa1031430 | 0.812808 | 3.519415e-51 | -8.615850e-47 |
| Msa0470650 | Msa1031430 | 0.802924 | 4.454389e-49 | -8.615850e-47 |
| Msa0475740 | Msa1031430 | 0.801285 | 9.676103e-49 | -8.615850e-47 |
| Msa0476490 | Msa1031430 | 0.806171 | 9.363269e-50 | -8.615850e-47 |
| Msa0985430 | Msa1031430 | 0.803953 | 2.726048e-49 | -8.615850e-47 |
| Msa1008960 | Msa1031430 | 0.817337 | 3.475741e-52 | -8.615850e-47 |
| Msa1014350 | Msa1031430 | 0.815400 | 9.428372e-52 | -8.615850e-47 |
| Msa1018720 | Msa1031430 | 0.803974 | 2.698813e-49 | -8.615850e-47 |
| Msa1031420 | Msa1031430 | 0.851566 | 8.164799e-61 | -8.615850e-47 |
| Msa1031430 | Msa1036350 | 0.806901 | 6.568791e-50 | -8.615850e-47 |
| Msa1031430 | Msa1061130 | 0.803960 | 2.716028e-49 | -8.615850e-47 |
| Msa1031430 | Msa1070510 | 0.960924 | 4.137966e-119 | -8.615850e-47 |
| Msa1031430 | Msa1081700 | 0.801698 | 7.963050e-49 | -8.615850e-47 |
| Msa1031430 | Msa1093390 | 0.814117 | 1.813801e-51 | -8.615850e-47 |
| Msa1031430 | Msa1096280 | 0.825421 | 4.730766e-54 | -8.615850e-47 |
| Msa1031430 | Msa1101190 | 0.814557 | 1.450101e-51 | -8.615850e-47 |
| Msa1031430 | Msa1106320 | 0.804470 | 2.127655e-49 | -8.615850e-47 |
| Msa1031430 | Msa1113210 | 0.844234 | 8.575608e-59 | -8.615850e-47 |
| Msa1031430 | Msa1133180 | 0.802826 | 4.665421e-49 | -8.615850e-47 |
| Msa1031430 | Msa1138450 | 0.822330 | 2.510117e-53 | -8.615850e-47 |
| Msa1031430 | Msa1140940 | 0.810468 | 1.135867e-50 | -8.615850e-47 |
| Msa1031430 | Msa1161160 | 0.800273 | 1.557224e-48 | -8.615850e-47 |
| Msa1031430 | Msa1179130 | 0.821458 | 3.995809e-53 | -8.615850e-47 |
| Msa1031430 | Msa1182480 | 0.819268 | 1.269568e-52 | -8.615850e-47 |
| Msa1031430 | Msa1182800 | 0.808301 | 3.312458e-50 | -8.615850e-47 |
| Msa1031430 | Msa1182830 | 0.805695 | 1.178970e-49 | -8.615850e-47 |
| Msa1031430 | Msa1196990 | 0.833758 | 4.435990e-56 | -8.615850e-47 |
| Msa1031430 | Msa1208250 | 0.808259 | 3.382433e-50 | -8.615850e-47 |
| Msa1031430 | Msa1211280 | 0.833457 | 5.274430e-56 | -8.615850e-47 |
| Msa1031430 | Msa1211370 | 0.820243 | 7.604224e-53 | -8.615850e-47 |
| Msa1031430 | Msa1233770 | 0.819129 | 1.366010e-52 | -8.615850e-47 |
| Msa1031430 | Msa1272070 | 0.803613 | 3.206197e-49 | -8.615850e-47 |
| Msa1031430 | Msa1275920 | 0.808060 | 3.728776e-50 | -8.615850e-47 |
| Msa1031430 | Msa1276080 | 0.811082 | 8.363486e-51 | -8.615850e-47 |
| Msa1031430 | Msa1314180 | 0.821657 | 3.592721e-53 | -8.615850e-47 |
| Msa1031430 | Msa1329820 | 0.814672 | 1.367347e-51 | -8.615850e-47 |
| Msa1031430 | Msa1338550 | 0.849443 | 3.224219e-60 | -8.615850e-47 |
| Msa1031430 | Msa1357380 | 0.806544 | 7.811971e-50 | -8.615850e-47 |
| Msa1031430 | Msa1366700 | 0.805397 | 1.361587e-49 | -8.615850e-47 |
| Msa1031430 | Msa1386020 | 0.829543 | 4.853249e-55 | -8.615850e-47 |
| Msa1031430 | Msa1388230 | 0.803877 | 2.825796e-49 | -8.615850e-47 |
| Msa1031430 | Msa1391600 | 0.816589 | 5.116232e-52 | -8.615850e-47 |
| Msa1031430 | Msa1397540 | 0.814626 | 1.399863e-51 | -8.615850e-47 |
| Msa1031430 | Msa1413880 | 0.824628 | 7.279728e-54 | -8.615850e-47 |
| Msa1031430 | Msa1425110 | 0.800337 | 1.511387e-48 | -8.615850e-47 |
| Msa1031430 | Msa1437650 | 0.809586 | 1.758946e-50 | -8.615850e-47 |
| Msa1031430 | Msa1443440 | 0.813998 | 1.927406e-51 | -8.615850e-47 |
| Msa1031430 | Msa1450420 | 0.801667 | 8.083147e-49 | -8.615850e-47 |
| Msa1031430 | Msa1466170 | 0.804909 | 1.722167e-49 | -8.615850e-47 |
| Msa0251140 | Msa1031430 | 0.827862 | 1.237491e-54 | -8.615850e-47 |
| Msa0265620 | Msa1031430 | 0.806489 | 8.025350e-50 | -8.615850e-47 |
| Msa0272420 | Msa1031430 | 0.826221 | 3.055785e-54 | -8.615850e-47 |
| Msa0296640 | Msa1031430 | 0.815293 | 9.956088e-52 | -8.615850e-47 |
| Msa0304020 | Msa1031430 | 0.832863 | 7.414713e-56 | -8.615850e-47 |
| Msa0305860 | Msa1031430 | 0.808470 | 3.049480e-50 | -8.615850e-47 |
| Msa0312570 | Msa1031430 | 0.821237 | 4.492590e-53 | -8.615850e-47 |
| Msa0340530 | Msa1031430 | 0.830901 | 2.262252e-55 | -8.615850e-47 |
| Msa0361500 | Msa1031430 | 0.839677 | 1.372971e-57 | -8.615850e-47 |
| Msa0492050 | Msa1031430 | 0.801853 | 7.402716e-49 | -8.615850e-47 |
| Msa0530930 | Msa1031430 | 0.804983 | 1.662644e-49 | -8.615850e-47 |
| Msa0535020 | Msa1031430 | 0.810872 | 9.287446e-51 | -8.615850e-47 |
| Msa0535050 | Msa1031430 | 0.813718 | 2.221578e-51 | -8.615850e-47 |
| Msa0539900 | Msa1031430 | 0.808860 | 2.516272e-50 | -8.615850e-47 |
| Msa0561420 | Msa1031430 | 0.830221 | 3.318203e-55 | -8.615850e-47 |
| Msa0566010 | Msa1031430 | 0.806271 | 8.920922e-50 | -8.615850e-47 |
| Msa0599250 | Msa1031430 | 0.807934 | 3.966591e-50 | -8.615850e-47 |
| Msa0846180 | Msa1031430 | 0.801817 | 7.527132e-49 | -8.615850e-47 |
| Msa0853920 | Msa1031430 | 0.808658 | 2.779106e-50 | -8.615850e-47 |
| Msa0871470 | Msa1031430 | 0.825350 | 4.916609e-54 | -8.615850e-47 |
| Msa0904630 | Msa1031430 | 0.801319 | 9.524049e-49 | -8.615850e-47 |
| Msa0906150 | Msa1031430 | 0.800838 | 1.194259e-48 | -8.615850e-47 |
| Msa0911910 | Msa1031430 | 0.816461 | 5.465261e-52 | -8.615850e-47 |
| Msa0936650 | Msa1031430 | 0.816013 | 6.881362e-52 | -8.615850e-47 |
| Msa0974570 | Msa1031430 | 0.801042 | 1.084908e-48 | -8.615850e-47 |
| Msa0975280 | Msa1031430 | 0.820870 | 5.458368e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031430 | MtrunA17_Chr7g0252921 | 86.973 | 261 | 28 | 2 | 3 | 257 | 194 | 454 | 3.51e-151 | 429 |
| Msa1031430 | MtrunA17_Chr7g0252891 | 63.740 | 262 | 87 | 4 | 4 | 257 | 217 | 478 | 3.83e-107 | 318 |
| Msa1031430 | MtrunA17_Chr7g0252881 | 63.462 | 260 | 88 | 3 | 4 | 256 | 196 | 455 | 2.55e-106 | 315 |
| Msa1031430 | MtrunA17_Chr4g0015031 | 62.452 | 261 | 91 | 3 | 4 | 257 | 206 | 466 | 9.65e-106 | 314 |
| Msa1031430 | MtrunA17_Chr7g0252911 | 58.846 | 260 | 101 | 2 | 4 | 257 | 196 | 455 | 5.29e-105 | 311 |
| Msa1031430 | MtrunA17_Chr7g0252941 | 86.782 | 174 | 18 | 1 | 50 | 218 | 6 | 179 | 8.35e-92 | 269 |
| Msa1031430 | MtrunA17_Chr6g0461671 | 54.183 | 251 | 108 | 2 | 4 | 247 | 232 | 482 | 4.56e-84 | 259 |
| Msa1031430 | MtrunA17_Chr7g0252861 | 55.020 | 249 | 103 | 4 | 4 | 245 | 219 | 465 | 7.54e-81 | 250 |
| Msa1031430 | MtrunA17_Chr7g0252901 | 46.296 | 108 | 50 | 1 | 150 | 257 | 1 | 100 | 5.84e-29 | 105 |
| Msa1031430 | MtrunA17_Chr7g0252931 | 81.250 | 48 | 8 | 1 | 4 | 51 | 21 | 67 | 8.04e-21 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031430 | AT5G18280.1 | 50.602 | 249 | 116 | 3 | 4 | 245 | 222 | 470 | 3.81e-77 | 241 |
| Msa1031430 | AT3G04080.1 | 50.602 | 249 | 116 | 3 | 4 | 245 | 221 | 469 | 2.70e-74 | 234 |
Find 64 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATCTACGATACGAATTT+TGG | 0.153561 | 7_1:-66073251 | None:intergenic |
| GTACATGAAACGATCAAATT+TGG | 0.196830 | 7_1:-66074730 | None:intergenic |
| CAGTATACATTGTTTGTTGA+TGG | 0.280650 | 7_1:+66073382 | Msa1031430:CDS |
| GGCATATTACAAGCACTAAT+AGG | 0.286453 | 7_1:-66074940 | None:intergenic |
| CATTGATTTCGTTGCATATA+TGG | 0.296216 | 7_1:+66075015 | Msa1031430:three_prime_UTR |
| CACTTTGCATTCATCAAAGT+TGG | 0.320663 | 7_1:-66072597 | None:intergenic |
| TGGAACGGTGGAGGAGGAAG+TGG | 0.352169 | 7_1:+66072686 | Msa1031430:CDS |
| CCTTGTGAGAAATGTACTTT+TGG | 0.372554 | 7_1:+66072656 | Msa1031430:CDS |
| AAAGGCACATATACATATTC+AGG | 0.381400 | 7_1:+66072539 | Msa1031430:intron |
| ACATTGTTTGTTGATGGATT+TGG | 0.386236 | 7_1:+66073388 | Msa1031430:CDS |
| TCTTTCAGTTATTTGCGCTT+TGG | 0.386501 | 7_1:+66072338 | Msa1031430:intron |
| CGTATCGTAGATCTGAAAAC+TGG | 0.387189 | 7_1:+66073259 | Msa1031430:CDS |
| ATATTCAGGAGAGGAGTATA+AGG | 0.395985 | 7_1:+66072553 | Msa1031430:CDS |
| TACATGAAACGATCAAATTT+GGG | 0.400032 | 7_1:-66074729 | None:intergenic |
| TCAAAGTTGGGGCCAGAAGC+AGG | 0.404729 | 7_1:-66072584 | None:intergenic |
| GCATATTACAAGCACTAATA+GGG | 0.410279 | 7_1:-66074939 | None:intergenic |
| CACATATCCACTTATTTATG+AGG | 0.413364 | 7_1:+66073324 | Msa1031430:CDS |
| ACTTTGCATTCATCAAAGTT+GGG | 0.421434 | 7_1:-66072596 | None:intergenic |
| AAGCTTCAAGAATTAAACTT+AGG | 0.422573 | 7_1:+66074763 | Msa1031430:exon |
| CTTGCTCTCTTGAATGTACA+TGG | 0.427223 | 7_1:-66072158 | None:intergenic |
| ATAAGATCCAAGCATGCATA+TGG | 0.431391 | 7_1:-66073355 | None:intergenic |
| TAATCTCTTGCAATGGGTCT+AGG | 0.432068 | 7_1:-66074620 | None:intergenic |
| CCAGCTAAAATGCAAGGATT+AGG | 0.433680 | 7_1:-66072407 | None:intergenic |
| AATAAGTGGATATGTGGCTT+TGG | 0.441902 | 7_1:-66073317 | None:intergenic |
| CATCAACAAACAATGTATAC+TGG | 0.442196 | 7_1:-66073381 | None:intergenic |
| TATCTTAGGATATTGCTTGT+TGG | 0.453391 | 7_1:-66074966 | None:intergenic |
| TCCTCTCCCTCAGGTACTTG+TGG | 0.454926 | 7_1:-66072192 | None:intergenic |
| CCACGGTAATCTCTTGCAAT+GGG | 0.459035 | 7_1:-66074626 | None:intergenic |
| GGGATATGGAACGGTGGAGG+AGG | 0.473543 | 7_1:+66072680 | Msa1031430:CDS |
| AATATTACCTCTATGTTCAC+AGG | 0.473842 | 7_1:+66072250 | Msa1031430:CDS |
| ATGTATGGATCCTCTCCCTC+AGG | 0.486133 | 7_1:-66072201 | None:intergenic |
| GGTGGGATATGGAACGGTGG+AGG | 0.488863 | 7_1:+66072677 | Msa1031430:CDS |
| TAATCTTCCATATGCATGCT+TGG | 0.498926 | 7_1:+66073348 | Msa1031430:CDS |
| CTCATAAATAAGTGGATATG+TGG | 0.500526 | 7_1:-66073323 | None:intergenic |
| TAGGATATTGCTTGTTGGCA+CGG | 0.500703 | 7_1:-66074961 | None:intergenic |
| GCCACGGTAATCTCTTGCAA+TGG | 0.500788 | 7_1:-66074627 | None:intergenic |
| GCACGACATATTACAACCAT+TGG | 0.514887 | 7_1:-66074917 | None:intergenic |
| ACGCATTAGGTGATGTTGGA+GGG | 0.515965 | 7_1:+66072121 | Msa1031430:intron |
| CAAAGTTGGGGCCAGAAGCA+GGG | 0.521616 | 7_1:-66072583 | None:intergenic |
| GACGCATTAGGTGATGTTGG+AGG | 0.524394 | 7_1:+66072120 | Msa1031430:intron |
| GTGGATGCAGCATGGCCTCT+AGG | 0.524509 | 7_1:+66074678 | Msa1031430:CDS |
| CTTTGCATTCATCAAAGTTG+GGG | 0.530483 | 7_1:-66072595 | None:intergenic |
| CGCATTAGGTGATGTTGGAG+GGG | 0.533947 | 7_1:+66072122 | Msa1031430:intron |
| TCCACAAGTACCTGAGGGAG+AGG | 0.539184 | 7_1:+66072191 | Msa1031430:CDS |
| GGTGACGCATTAGGTGATGT+TGG | 0.560563 | 7_1:+66072117 | Msa1031430:intron |
| AGATTATCCTCATAAATAAG+TGG | 0.574466 | 7_1:-66073331 | None:intergenic |
| AATAAAACCTGTGAACATAG+AGG | 0.575004 | 7_1:-66072257 | None:intergenic |
| AAACGATCAAATTTGGGCAA+TGG | 0.575531 | 7_1:-66074723 | None:intergenic |
| ATATTCAATTTGATTTGCCA+CGG | 0.578091 | 7_1:-66074643 | None:intergenic |
| TGAATATCAAGACGCAGTTG+TGG | 0.588633 | 7_1:+66074659 | Msa1031430:CDS |
| GGAACGGTGGAGGAGGAAGT+GGG | 0.591214 | 7_1:+66072687 | Msa1031430:CDS |
| GCATTAGGTGATGTTGGAGG+GGG | 0.604173 | 7_1:+66072123 | Msa1031430:intron |
| AAAGTTGGGGCCAGAAGCAG+GGG | 0.606784 | 7_1:-66072582 | None:intergenic |
| TGATAGCCAGCTAAAATGCA+AGG | 0.615009 | 7_1:-66072413 | None:intergenic |
| AGTTTGTAAAACAAAATACA+AGG | 0.630812 | 7_1:+66073291 | Msa1031430:CDS |
| CACATATACATATTCAGGAG+AGG | 0.631559 | 7_1:+66072544 | Msa1031430:CDS |
| GCTTCTGTTGCATTGCCTAG+AGG | 0.632703 | 7_1:-66074693 | None:intergenic |
| AAGAGCTCCACAAGTACCTG+AGG | 0.640256 | 7_1:+66072185 | Msa1031430:CDS |
| ACGCAGTTGTGGATGCAGCA+TGG | 0.643145 | 7_1:+66074670 | Msa1031430:CDS |
| CCAAAAGTACATTTCTCACA+AGG | 0.649040 | 7_1:-66072656 | None:intergenic |
| TGTGTATAATATGTATCCAA+TGG | 0.653679 | 7_1:+66074901 | Msa1031430:three_prime_UTR |
| AGAGCTCCACAAGTACCTGA+GGG | 0.666757 | 7_1:+66072186 | Msa1031430:CDS |
| TTTGGTGGGATATGGAACGG+TGG | 0.747214 | 7_1:+66072674 | Msa1031430:CDS |
| CCCATTGCAAGAGATTACCG+TGG | 0.756212 | 7_1:+66074626 | Msa1031430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTAAAAATAAAAATGA+CGG | - | chr7_1:66071817-66071836 | None:intergenic | 10.0% |
| !!! | TTGTTTTATAATTTGAAAAA+TGG | - | chr7_1:66072830-66072849 | None:intergenic | 10.0% |
| !! | ATGTAAAAAAAAATTATGTT+GGG | - | chr7_1:66074116-66074135 | None:intergenic | 10.0% |
| !! | TATGTAAAAAAAAATTATGT+TGG | - | chr7_1:66074117-66074136 | None:intergenic | 10.0% |
| !!! | TTTTCATTTTATTTTATCTT+AGG | - | chr7_1:66074983-66075002 | None:intergenic | 10.0% |
| !!! | TTTTGGTCAATTTAATTTAT+TGG | - | chr7_1:66071628-66071647 | None:intergenic | 15.0% |
| !!! | TCAAAAGCATTTTTTTTTTA+AGG | - | chr7_1:66071741-66071760 | None:intergenic | 15.0% |
| !! | ATAAAAAAGATTGTACTTAA+AGG | + | chr7_1:66072222-66072241 | Msa1031430:CDS | 15.0% |
| !!! | TGTTGATAAAATTAATTGTA+GGG | + | chr7_1:66072468-66072487 | Msa1031430:intron | 15.0% |
| !!! | ATCTAAAATCATTATATTCT+AGG | + | chr7_1:66073170-66073189 | Msa1031430:intron | 15.0% |
| !!! | ATTGATCCTTTAAATTATTT+TGG | - | chr7_1:66073664-66073683 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr7_1:66073773-66073792 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr7_1:66073900-66073919 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr7_1:66073899-66073918 | Msa1031430:intron | 15.0% |
| !! | TGAATATAATAGAAATTACA+AGG | + | chr7_1:66074254-66074273 | Msa1031430:intron | 15.0% |
| !! | AATTTAAAAGACATTAACTT+AGG | - | chr7_1:66074566-66074585 | None:intergenic | 15.0% |
| !!! | TTGTGAAGCAATATTATTTT+TGG | + | chr7_1:66071657-66071676 | Msa1031430:intron | 20.0% |
| !!! | AGTACAATCTTTTTTATGTA+TGG | - | chr7_1:66072219-66072238 | None:intergenic | 20.0% |
| !!! | GGTTTTATTCTTAATATTCT+TGG | + | chr7_1:66072271-66072290 | Msa1031430:intron | 20.0% |
| !!! | CTGTTGATAAAATTAATTGT+AGG | + | chr7_1:66072467-66072486 | Msa1031430:intron | 20.0% |
| !!! | TTTTTTAACTAGATCTTGAT+CGG | + | chr7_1:66072870-66072889 | Msa1031430:intron | 20.0% |
| !!! | AAGATAAATGTACTTTTTCT+AGG | - | chr7_1:66073112-66073131 | None:intergenic | 20.0% |
| !!! | AAAAAGTACATTTATCTTTC+TGG | + | chr7_1:66073114-66073133 | Msa1031430:intron | 20.0% |
| !! | AGTTTGTAAAACAAAATACA+AGG | + | chr7_1:66073291-66073310 | Msa1031430:CDS | 20.0% |
| !!! | AATTGAAAGCGTTTATATTT+GGG | - | chr7_1:66073499-66073518 | None:intergenic | 20.0% |
| !!! | AAATTGAAAGCGTTTATATT+TGG | - | chr7_1:66073500-66073519 | None:intergenic | 20.0% |
| !! | GTATGACCAAAATAATTTAA+AGG | + | chr7_1:66073655-66073674 | Msa1031430:intron | 20.0% |
| !!! | ATTTTAGGTTAAATTACATC+AGG | - | chr7_1:66073715-66073734 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr7_1:66073813-66073832 | None:intergenic | 20.0% |
| !!! | TCGTTTTAAAAGTAATACTT+TGG | - | chr7_1:66073876-66073895 | None:intergenic | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr7_1:66073933-66073952 | None:intergenic | 20.0% |
| !!! | CCTAAAAAGAAGAATTTTTA+AGG | - | chr7_1:66074189-66074208 | None:intergenic | 20.0% |
| !!! | CCTTAAAAATTCTTCTTTTT+AGG | + | chr7_1:66074186-66074205 | Msa1031430:intron | 20.0% |
| !! | AAATCATATTGTAACAAGTT+AGG | - | chr7_1:66074424-66074443 | None:intergenic | 20.0% |
| !! | CACACAACTTATTAAATAAA+TGG | + | chr7_1:66074839-66074858 | Msa1031430:intron | 20.0% |
| !! | CAACTTATTAAATAAATGGA+TGG | + | chr7_1:66074843-66074862 | Msa1031430:intron | 20.0% |
| !! | TGGTCAATTTAATTTATTGG+AGG | - | chr7_1:66071625-66071644 | None:intergenic | 25.0% |
| ! | TAATATTGCTTCACAAATGA+GGG | - | chr7_1:66071653-66071672 | None:intergenic | 25.0% |
| ! | ATAATATTGCTTCACAAATG+AGG | - | chr7_1:66071654-66071673 | None:intergenic | 25.0% |
| ! | ATTGTTATCACCAAATACAA+AGG | + | chr7_1:66071849-66071868 | Msa1031430:intron | 25.0% |
| ! | ACATAAGTAACCTTTGTATT+TGG | - | chr7_1:66071862-66071881 | None:intergenic | 25.0% |
| ! | GAAAGTTAAAAGAAAGTGAA+AGG | - | chr7_1:66071911-66071930 | None:intergenic | 25.0% |
| !!! | GAAATTTTGAAAGTCACTAA+TGG | + | chr7_1:66072380-66072399 | Msa1031430:CDS | 25.0% |
| ! | AATGGCTTATCATCAATTTA+AGG | - | chr7_1:66072508-66072527 | None:intergenic | 25.0% |
| !!! | AGCCATTTTTTATTCTTCAA+AGG | + | chr7_1:66072521-66072540 | Msa1031430:intron | 25.0% |
| !! | TGCCTTTGAAGAATAAAAAA+TGG | - | chr7_1:66072526-66072545 | None:intergenic | 25.0% |
| ! | ATGCAAAGTGATAATTCTTT+AGG | + | chr7_1:66072610-66072629 | Msa1031430:intron | 25.0% |
| !! | ATTTTATTACGTGCTTACAA+GGG | + | chr7_1:66072736-66072755 | Msa1031430:CDS | 25.0% |
| !! | AATGATTTTAGATTTTTGCG+AGG | - | chr7_1:66073163-66073182 | None:intergenic | 25.0% |
| !!! | TATGTTATTTCTACATGTGT+AGG | + | chr7_1:66073198-66073217 | Msa1031430:intron | 25.0% |
| ! | AGATTATCCTCATAAATAAG+TGG | - | chr7_1:66073334-66073353 | None:intergenic | 25.0% |
| ! | ATGTGACCAAAATAACTTAA+AGG | + | chr7_1:66073595-66073614 | Msa1031430:intron | 25.0% |
| !!! | ATTGGTCCTTTAAGTTATTT+TGG | - | chr7_1:66073604-66073623 | None:intergenic | 25.0% |
| ! | AAACGAACCAATAGTTAATA+AGG | + | chr7_1:66073890-66073909 | Msa1031430:intron | 25.0% |
| !! | CAAGTAAAAAGCATATAAGA+AGG | - | chr7_1:66074031-66074050 | None:intergenic | 25.0% |
| !!! | TGTGTGGTTATTTATTTTCA+TGG | - | chr7_1:66074077-66074096 | None:intergenic | 25.0% |
| !!! | CTTGATTTCTAAAATATGTG+TGG | - | chr7_1:66074093-66074112 | None:intergenic | 25.0% |
| ! | CATATGCTAATTACAAGAAA+TGG | + | chr7_1:66074133-66074152 | Msa1031430:intron | 25.0% |
| ! | TGCTTCAAAAAAATTATTGC+AGG | + | chr7_1:66074281-66074300 | Msa1031430:intron | 25.0% |
| ! | GCTTCAAAAAAATTATTGCA+GGG | + | chr7_1:66074282-66074301 | Msa1031430:intron | 25.0% |
| ! | CTTCAAAAAAATTATTGCAG+GGG | + | chr7_1:66074283-66074302 | Msa1031430:intron | 25.0% |
| !!! | TCATTAAGAGTGTTGAAATT+CGG | - | chr7_1:66074350-66074369 | None:intergenic | 25.0% |
| ! | ATGAAAGCTAACTTAAAGTT+TGG | + | chr7_1:66074366-66074385 | Msa1031430:intron | 25.0% |
| !!! | ATATTCAATTTGATTTGCCA+CGG | - | chr7_1:66074646-66074665 | None:intergenic | 25.0% |
| ! | TACATGAAACGATCAAATTT+GGG | - | chr7_1:66074732-66074751 | None:intergenic | 25.0% |
| ! | AAGCTTCAAGAATTAAACTT+AGG | + | chr7_1:66074763-66074782 | Msa1031430:exon | 25.0% |
| ! | TAGCCAATAAAATAAAAGCA+CGG | + | chr7_1:66074810-66074829 | Msa1031430:intron | 25.0% |
| ! | TGTGTATAATATGTATCCAA+TGG | + | chr7_1:66074901-66074920 | Msa1031430:three_prime_UTR | 25.0% |
| ATGGAAAGTTTCATATTGGT+GGG | + | chr7_1:66071548-66071567 | Msa1031430:intron | 30.0% | |
| AAGAAAGTGAAAGGAAAGAA+AGG | - | chr7_1:66071902-66071921 | None:intergenic | 30.0% | |
| AATATTACCTCTATGTTCAC+AGG | + | chr7_1:66072250-66072269 | Msa1031430:CDS | 30.0% | |
| AATAAAACCTGTGAACATAG+AGG | - | chr7_1:66072260-66072279 | None:intergenic | 30.0% | |
| ! | AAAGGCACATATACATATTC+AGG | + | chr7_1:66072539-66072558 | Msa1031430:intron | 30.0% |
| ACTTTGCATTCATCAAAGTT+GGG | - | chr7_1:66072599-66072618 | None:intergenic | 30.0% | |
| ! | CATTTTATTACGTGCTTACA+AGG | + | chr7_1:66072735-66072754 | Msa1031430:CDS | 30.0% |
| ATTTCCAACATTCACGTATT+GGG | + | chr7_1:66072801-66072820 | Msa1031430:intron | 30.0% | |
| ATCAGATTTCATACTGTCAA+CGG | - | chr7_1:66072933-66072952 | None:intergenic | 30.0% | |
| !! | TTATTTCTACATGTGTAGGT+TGG | + | chr7_1:66073202-66073221 | Msa1031430:intron | 30.0% |
| CTCATAAATAAGTGGATATG+TGG | - | chr7_1:66073326-66073345 | None:intergenic | 30.0% | |
| CACATATCCACTTATTTATG+AGG | + | chr7_1:66073324-66073343 | Msa1031430:CDS | 30.0% | |
| CATCAACAAACAATGTATAC+TGG | - | chr7_1:66073384-66073403 | None:intergenic | 30.0% | |
| ! | CAGTATACATTGTTTGTTGA+TGG | + | chr7_1:66073382-66073401 | Msa1031430:CDS | 30.0% |
| !! | ACATTGTTTGTTGATGGATT+TGG | + | chr7_1:66073388-66073407 | Msa1031430:CDS | 30.0% |
| ! | GTTTGAAGTTTGTAACAGAT+TGG | - | chr7_1:66073622-66073641 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr7_1:66073981-66074000 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr7_1:66073982-66074001 | Msa1031430:intron | 30.0% |
| ACAAGAAATGGTGTATTTGT+TGG | + | chr7_1:66074145-66074164 | Msa1031430:intron | 30.0% | |
| ACAATGACTAAGAACTTAGA+AGG | + | chr7_1:66074395-66074414 | Msa1031430:intron | 30.0% | |
| GTACATGAAACGATCAAATT+TGG | - | chr7_1:66074733-66074752 | None:intergenic | 30.0% | |
| GCATATTACAAGCACTAATA+GGG | - | chr7_1:66074942-66074961 | None:intergenic | 30.0% | |
| TATCTTAGGATATTGCTTGT+TGG | - | chr7_1:66074969-66074988 | None:intergenic | 30.0% | |
| !! | CATTGATTTCGTTGCATATA+TGG | + | chr7_1:66075015-66075034 | Msa1031430:three_prime_UTR | 30.0% |
| ! | ATCATGTTTCTGCTCATCAT+GGG | - | chr7_1:66071597-66071616 | None:intergenic | 35.0% |
| GAAGCAAAGAAAGAGTCAAA+AGG | - | chr7_1:66071694-66071713 | None:intergenic | 35.0% | |
| GAAAGTGAGTAGAAAGTGAA+TGG | - | chr7_1:66071969-66071988 | None:intergenic | 35.0% | |
| GTGAAAGGAAAGATTGTTGA+AGG | - | chr7_1:66071995-66072014 | None:intergenic | 35.0% | |
| ATCTTTCCTCTCACTTTCTT+TGG | + | chr7_1:66072016-66072035 | Msa1031430:intron | 35.0% | |
| TCTTTCAGTTATTTGCGCTT+TGG | + | chr7_1:66072338-66072357 | Msa1031430:intron | 35.0% | |
| CACATATACATATTCAGGAG+AGG | + | chr7_1:66072544-66072563 | Msa1031430:CDS | 35.0% | |
| ! | ATATTCAGGAGAGGAGTATA+AGG | + | chr7_1:66072553-66072572 | Msa1031430:CDS | 35.0% |
| CTTTGCATTCATCAAAGTTG+GGG | - | chr7_1:66072598-66072617 | None:intergenic | 35.0% | |
| CACTTTGCATTCATCAAAGT+TGG | - | chr7_1:66072600-66072619 | None:intergenic | 35.0% | |
| ! | CCAAAAGTACATTTCTCACA+AGG | - | chr7_1:66072659-66072678 | None:intergenic | 35.0% |
| ! | CCTTGTGAGAAATGTACTTT+TGG | + | chr7_1:66072656-66072675 | Msa1031430:CDS | 35.0% |
| ! | TGTGAGAAATGTACTTTTGG+TGG | + | chr7_1:66072659-66072678 | Msa1031430:CDS | 35.0% |
| ! | GTGAGAAATGTACTTTTGGT+GGG | + | chr7_1:66072660-66072679 | Msa1031430:CDS | 35.0% |
| ! | AATGTACTTTTGGTGGGATA+TGG | + | chr7_1:66072666-66072685 | Msa1031430:CDS | 35.0% |
| GATTTCCAACATTCACGTAT+TGG | + | chr7_1:66072800-66072819 | Msa1031430:intron | 35.0% | |
| ! | ACGATACGAATTTTGGACTT+GGG | - | chr7_1:66073247-66073266 | None:intergenic | 35.0% |
| ! | TACGATACGAATTTTGGACT+TGG | - | chr7_1:66073248-66073267 | None:intergenic | 35.0% |
| ! | CAGATCTACGATACGAATTT+TGG | - | chr7_1:66073254-66073273 | None:intergenic | 35.0% |
| AATAAGTGGATATGTGGCTT+TGG | - | chr7_1:66073320-66073339 | None:intergenic | 35.0% | |
| TAATCTTCCATATGCATGCT+TGG | + | chr7_1:66073348-66073367 | Msa1031430:CDS | 35.0% | |
| ATAAGATCCAAGCATGCATA+TGG | - | chr7_1:66073358-66073377 | None:intergenic | 35.0% | |
| TGTTAACCTAAACGATGATG+TGG | + | chr7_1:66073528-66073547 | Msa1031430:intron | 35.0% | |
| GTTACAAACCTCAAACGTAA+AGG | + | chr7_1:66073686-66073705 | Msa1031430:intron | 35.0% | |
| !! | AAACGGAGGGAGTATATTTT+AGG | - | chr7_1:66073730-66073749 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr7_1:66073747-66073766 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr7_1:66073847-66073866 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr7_1:66073851-66073870 | None:intergenic | 35.0% |
| AGCATACCTCTAGTATTCTT+AGG | + | chr7_1:66074537-66074556 | Msa1031430:intron | 35.0% | |
| ! | AAACATGTATTTGTTGACGC+AGG | + | chr7_1:66074597-66074616 | Msa1031430:intron | 35.0% |
| AAACGATCAAATTTGGGCAA+TGG | - | chr7_1:66074726-66074745 | None:intergenic | 35.0% | |
| !!! | GTGCCGTGCTTTTATTTTAT+TGG | - | chr7_1:66074816-66074835 | None:intergenic | 35.0% |
| GGCATATTACAAGCACTAAT+AGG | - | chr7_1:66074943-66074962 | None:intergenic | 35.0% | |
| ! | TCATGTTTCTGCTCATCATG+GGG | - | chr7_1:66071596-66071615 | None:intergenic | 40.0% |
| ! | GATCATGTTTCTGCTCATCA+TGG | - | chr7_1:66071598-66071617 | None:intergenic | 40.0% |
| GTGAGAGGAAAGATAGTGAA+AGG | - | chr7_1:66072010-66072029 | None:intergenic | 40.0% | |
| CTTGCTCTCTTGAATGTACA+TGG | - | chr7_1:66072161-66072180 | None:intergenic | 40.0% | |
| CCAGCTAAAATGCAAGGATT+AGG | - | chr7_1:66072410-66072429 | None:intergenic | 40.0% | |
| !! | CCTAATCCTTGCATTTTAGC+TGG | + | chr7_1:66072407-66072426 | Msa1031430:CDS | 40.0% |
| TGATAGCCAGCTAAAATGCA+AGG | - | chr7_1:66072416-66072435 | None:intergenic | 40.0% | |
| !!! | TGCATTTTAGCTGGCTATCA+TGG | + | chr7_1:66072416-66072435 | Msa1031430:CDS | 40.0% |
| ! | ACTTTTGGTGGGATATGGAA+CGG | + | chr7_1:66072671-66072690 | Msa1031430:CDS | 40.0% |
| TATGTTCCAAATGCGTAGTG+AGG | + | chr7_1:66072904-66072923 | Msa1031430:intron | 40.0% | |
| ATGTTCCAAATGCGTAGTGA+GGG | + | chr7_1:66072905-66072924 | Msa1031430:intron | 40.0% | |
| CGTATCGTAGATCTGAAAAC+TGG | + | chr7_1:66073259-66073278 | Msa1031430:CDS | 40.0% | |
| TCAGGTTTCCTTTACGTTTG+AGG | - | chr7_1:66073697-66073716 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr7_1:66073986-66074005 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr7_1:66073848-66073867 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+TGG | + | chr7_1:66073986-66074005 | Msa1031430:intron | 40.0% |
| GCAATCAGAAGTGAAATACG+AGG | + | chr7_1:66074230-66074249 | Msa1031430:intron | 40.0% | |
| AGGTTGCCTAAGAATACTAG+AGG | - | chr7_1:66074546-66074565 | None:intergenic | 40.0% | |
| TAATCTCTTGCAATGGGTCT+AGG | - | chr7_1:66074623-66074642 | None:intergenic | 40.0% | |
| TGAATATCAAGACGCAGTTG+TGG | + | chr7_1:66074659-66074678 | Msa1031430:CDS | 40.0% | |
| GCACGACATATTACAACCAT+TGG | - | chr7_1:66074920-66074939 | None:intergenic | 40.0% | |
| ! | TAGGATATTGCTTGTTGGCA+CGG | - | chr7_1:66074964-66074983 | None:intergenic | 40.0% |
| ! | TCATGGGGCGGAAAGTTTTT+AGG | - | chr7_1:66071581-66071600 | None:intergenic | 45.0% |
| !!! | CTTCACAAATGAGGGCGTTT+TGG | - | chr7_1:66071645-66071664 | None:intergenic | 45.0% |
| GGATCACCAAAGAAAGTGAG+AGG | - | chr7_1:66072025-66072044 | None:intergenic | 45.0% | |
| CTGTCCAATAGCATTTCCCA+AGG | - | chr7_1:66072082-66072101 | None:intergenic | 45.0% | |
| GGAAATGCTATTGGACAGCT+GGG | + | chr7_1:66072084-66072103 | Msa1031430:intron | 45.0% | |
| ACGCATTAGGTGATGTTGGA+GGG | + | chr7_1:66072121-66072140 | Msa1031430:intron | 45.0% | |
| TCCAACATTCACGTATTGGG+TGG | + | chr7_1:66072804-66072823 | Msa1031430:intron | 45.0% | |
| !! | ATTTTGGACTTGGGCTTGCT+TGG | - | chr7_1:66073238-66073257 | None:intergenic | 45.0% |
| CTTCTGCCACATCATCGTTT+AGG | - | chr7_1:66073537-66073556 | None:intergenic | 45.0% | |
| CTAAACGATGATGTGGCAGA+AGG | + | chr7_1:66073535-66073554 | Msa1031430:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr7_1:66073985-66074004 | None:intergenic | 45.0% |
| CCACGGTAATCTCTTGCAAT+GGG | - | chr7_1:66074629-66074648 | None:intergenic | 45.0% | |
| ATGGATGGCACACACAACAT+AGG | + | chr7_1:66074858-66074877 | Msa1031430:intron | 45.0% | |
| !! | GGCGGAAAGTTTTTAGGCAG+GGG | - | chr7_1:66071575-66071594 | None:intergenic | 50.0% |
| !! | GGGCGGAAAGTTTTTAGGCA+GGG | - | chr7_1:66071576-66071595 | None:intergenic | 50.0% |
| ! | TGTTTCTGCTCATCATGGGG+CGG | - | chr7_1:66071593-66071612 | None:intergenic | 50.0% |
| ACCCTAAGAGCCCCAACTTT+GGG | + | chr7_1:66072051-66072070 | Msa1031430:intron | 50.0% | |
| ACCCAAAGTTGGGGCTCTTA+GGG | - | chr7_1:66072055-66072074 | None:intergenic | 50.0% | |
| GAGGCCTTGGGAAATGCTAT+TGG | + | chr7_1:66072075-66072094 | Msa1031430:intron | 50.0% | |
| GGGAAATGCTATTGGACAGC+TGG | + | chr7_1:66072083-66072102 | Msa1031430:intron | 50.0% | |
| AATGCTATTGGACAGCTGGG+AGG | + | chr7_1:66072087-66072106 | Msa1031430:intron | 50.0% | |
| GGAACTTTGGGTGACGCATT+AGG | + | chr7_1:66072108-66072127 | Msa1031430:intron | 50.0% | |
| GGTGACGCATTAGGTGATGT+TGG | + | chr7_1:66072117-66072136 | Msa1031430:intron | 50.0% | |
| GACGCATTAGGTGATGTTGG+AGG | + | chr7_1:66072120-66072139 | Msa1031430:intron | 50.0% | |
| CGCATTAGGTGATGTTGGAG+GGG | + | chr7_1:66072122-66072141 | Msa1031430:intron | 50.0% | |
| GCATTAGGTGATGTTGGAGG+GGG | + | chr7_1:66072123-66072142 | Msa1031430:intron | 50.0% | |
| AAGAGCTCCACAAGTACCTG+AGG | + | chr7_1:66072185-66072204 | Msa1031430:CDS | 50.0% | |
| AGAGCTCCACAAGTACCTGA+GGG | + | chr7_1:66072186-66072205 | Msa1031430:CDS | 50.0% | |
| ATGTATGGATCCTCTCCCTC+AGG | - | chr7_1:66072204-66072223 | None:intergenic | 50.0% | |
| !! | AAGGCATTTTCCCCTGCTTC+TGG | + | chr7_1:66072572-66072591 | Msa1031430:CDS | 50.0% |
| TTTGGTGGGATATGGAACGG+TGG | + | chr7_1:66072674-66072693 | Msa1031430:CDS | 50.0% | |
| GCCACCCAATACGTGAATGT+TGG | - | chr7_1:66072808-66072827 | None:intergenic | 50.0% | |
| CCCATTGCAAGAGATTACCG+TGG | + | chr7_1:66074626-66074645 | Msa1031430:CDS | 50.0% | |
| GCCACGGTAATCTCTTGCAA+TGG | - | chr7_1:66074630-66074649 | None:intergenic | 50.0% | |
| GCTTCTGTTGCATTGCCTAG+AGG | - | chr7_1:66074696-66074715 | None:intergenic | 50.0% | |
| !! | GGGGCGGAAAGTTTTTAGGC+AGG | - | chr7_1:66071577-66071596 | None:intergenic | 55.0% |
| TGGGGCTCTTAGGGTGTGTT+TGG | - | chr7_1:66072046-66072065 | None:intergenic | 55.0% | |
| CACCCTAAGAGCCCCAACTT+TGG | + | chr7_1:66072050-66072069 | Msa1031430:intron | 55.0% | |
| CACCCAAAGTTGGGGCTCTT+AGG | - | chr7_1:66072056-66072075 | None:intergenic | 55.0% | |
| AAGAGCCCCAACTTTGGGTG+AGG | + | chr7_1:66072056-66072075 | Msa1031430:intron | 55.0% | |
| CAAGGCCTCACCCAAAGTTG+GGG | - | chr7_1:66072064-66072083 | None:intergenic | 55.0% | |
| CCAAGGCCTCACCCAAAGTT+GGG | - | chr7_1:66072065-66072084 | None:intergenic | 55.0% | |
| CCAACTTTGGGTGAGGCCTT+GGG | + | chr7_1:66072063-66072082 | Msa1031430:intron | 55.0% | |
| TGGACAGCTGGGAGGAACTT+TGG | + | chr7_1:66072095-66072114 | Msa1031430:intron | 55.0% | |
| GGACAGCTGGGAGGAACTTT+GGG | + | chr7_1:66072096-66072115 | Msa1031430:intron | 55.0% | |
| TCCACAAGTACCTGAGGGAG+AGG | + | chr7_1:66072191-66072210 | Msa1031430:CDS | 55.0% | |
| TCCTCTCCCTCAGGTACTTG+TGG | - | chr7_1:66072195-66072214 | None:intergenic | 55.0% | |
| AAAGTTGGGGCCAGAAGCAG+GGG | - | chr7_1:66072585-66072604 | None:intergenic | 55.0% | |
| CAAAGTTGGGGCCAGAAGCA+GGG | - | chr7_1:66072586-66072605 | None:intergenic | 55.0% | |
| TCAAAGTTGGGGCCAGAAGC+AGG | - | chr7_1:66072587-66072606 | None:intergenic | 55.0% | |
| CGGTTCCCTCACTACGCATT+TGG | - | chr7_1:66072913-66072932 | None:intergenic | 55.0% | |
| ACGCAGTTGTGGATGCAGCA+TGG | + | chr7_1:66074670-66074689 | Msa1031430:CDS | 55.0% | |
| CCCAACTTTGGGTGAGGCCT+TGG | + | chr7_1:66072062-66072081 | Msa1031430:intron | 60.0% | |
| CCCAAGGCCTCACCCAAAGT+TGG | - | chr7_1:66072066-66072085 | None:intergenic | 60.0% | |
| GGTGGGATATGGAACGGTGG+AGG | + | chr7_1:66072677-66072696 | Msa1031430:CDS | 60.0% | |
| GGGATATGGAACGGTGGAGG+AGG | + | chr7_1:66072680-66072699 | Msa1031430:CDS | 60.0% | |
| TGGAACGGTGGAGGAGGAAG+TGG | + | chr7_1:66072686-66072705 | Msa1031430:CDS | 60.0% | |
| GGAACGGTGGAGGAGGAAGT+GGG | + | chr7_1:66072687-66072706 | Msa1031430:CDS | 60.0% | |
| GTGGATGCAGCATGGCCTCT+AGG | + | chr7_1:66074678-66074697 | Msa1031430:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 66071548 | 66075051 | 66071548 | ID=Msa1031430;Name=Msa1031430 |
| chr7_1 | mRNA | 66071548 | 66075051 | 66071548 | ID=Msa1031430-mRNA-1;Parent=Msa1031430;Name=Msa1031430-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.71|0.5|0.87|0.42|0.37|8|234|258 |
| chr7_1 | exon | 66071548 | 66071554 | 66071548 | ID=Msa1031430-mRNA-1:exon:14727;Parent=Msa1031430-mRNA-1 |
| chr7_1 | exon | 66072130 | 66072271 | 66072130 | ID=Msa1031430-mRNA-1:exon:14728;Parent=Msa1031430-mRNA-1 |
| chr7_1 | exon | 66072346 | 66072437 | 66072346 | ID=Msa1031430-mRNA-1:exon:14729;Parent=Msa1031430-mRNA-1 |
| chr7_1 | exon | 66072543 | 66072616 | 66072543 | ID=Msa1031430-mRNA-1:exon:14730;Parent=Msa1031430-mRNA-1 |
| chr7_1 | exon | 66072632 | 66072757 | 66072632 | ID=Msa1031430-mRNA-1:exon:14731;Parent=Msa1031430-mRNA-1 |
| chr7_1 | exon | 66073220 | 66073409 | 66073220 | ID=Msa1031430-mRNA-1:exon:14732;Parent=Msa1031430-mRNA-1 |
| chr7_1 | exon | 66074619 | 66074826 | 66074619 | ID=Msa1031430-mRNA-1:exon:14733;Parent=Msa1031430-mRNA-1 |
| chr7_1 | exon | 66074880 | 66075051 | 66074880 | ID=Msa1031430-mRNA-1:exon:14734;Parent=Msa1031430-mRNA-1 |
| chr7_1 | CDS | 66071548 | 66071554 | 66071548 | ID=Msa1031430-mRNA-1:cds;Parent=Msa1031430-mRNA-1 |
| chr7_1 | CDS | 66072130 | 66072271 | 66072130 | ID=Msa1031430-mRNA-1:cds;Parent=Msa1031430-mRNA-1 |
| chr7_1 | CDS | 66072346 | 66072437 | 66072346 | ID=Msa1031430-mRNA-1:cds;Parent=Msa1031430-mRNA-1 |
| chr7_1 | CDS | 66072543 | 66072616 | 66072543 | ID=Msa1031430-mRNA-1:cds;Parent=Msa1031430-mRNA-1 |
| chr7_1 | CDS | 66072632 | 66072757 | 66072632 | ID=Msa1031430-mRNA-1:cds;Parent=Msa1031430-mRNA-1 |
| chr7_1 | CDS | 66073220 | 66073409 | 66073220 | ID=Msa1031430-mRNA-1:cds;Parent=Msa1031430-mRNA-1 |
| chr7_1 | CDS | 66074619 | 66074764 | 66074619 | ID=Msa1031430-mRNA-1:cds;Parent=Msa1031430-mRNA-1 |
| chr7_1 | three_prime_UTR | 66074765 | 66074826 | 66074765 | ID=Msa1031430-mRNA-1:three_prime_utr;Parent=Msa1031430-mRNA-1 |
| chr7_1 | three_prime_UTR | 66074880 | 66075051 | 66074880 | ID=Msa1031430-mRNA-1:three_prime_utr;Parent=Msa1031430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
