Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101850 | KEH16686.1 | 86.517 | 89 | 11 | 1 | 55 | 143 | 160 | 247 | 1.59e-45 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101850 | A0A072THJ7 | 86.517 | 89 | 11 | 1 | 55 | 143 | 160 | 247 | 7.57e-46 | 164 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1019000 | Msa1101850 | 0.806963 | 6.371705e-50 | -8.615850e-47 |
| Msa1101850 | Msa1101860 | 0.886203 | 4.196170e-72 | -8.615850e-47 |
| Msa0965610 | Msa1101850 | 0.810506 | 1.114562e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101850 | MtrunA17_Chr7g0231021 | 86.517 | 89 | 11 | 1 | 55 | 143 | 148 | 235 | 1.66e-49 | 163 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 65 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCAAGGATATTAAGAATT+AGG | 0.120291 | 7_3:-32909883 | Msa1101850:intron |
| ATAGGGTTTGTTATAAATTA+TGG | 0.203465 | 7_3:-32912167 | Msa1101850:CDS |
| ATTCGAACGGTTGGAAATTT+AGG | 0.232838 | 7_3:-32910021 | Msa1101850:intron |
| ATTACCATTAATATTTGATT+TGG | 0.235324 | 7_3:+32912065 | None:intergenic |
| GACAAACGTGCTGAGAAATT+TGG | 0.260967 | 7_3:+32910055 | None:intergenic |
| AGGGCGACATAAAGTTTAAT+TGG | 0.261510 | 7_3:-32910081 | Msa1101850:CDS |
| GACAAATGTACCGAGAAATT+TGG | 0.264070 | 7_3:+32912261 | None:intergenic |
| ATCAAGGATATTAAGAATTA+GGG | 0.265204 | 7_3:-32909882 | Msa1101850:intron |
| ATTGTCTATCTTTAGAAGTT+AGG | 0.281728 | 7_3:-32912191 | Msa1101850:CDS |
| GTTCGCCATGTACGGTATAT+TGG | 0.291782 | 7_3:-32909693 | Msa1101850:CDS |
| ACGGTTAGCGGCGGCTGATT+TGG | 0.297200 | 7_3:-32909774 | Msa1101850:CDS |
| TTACCATTAATATTTGATTT+GGG | 0.300680 | 7_3:+32912066 | None:intergenic |
| ATATTAAGAATTAGGGTATT+AGG | 0.310105 | 7_3:-32909875 | Msa1101850:CDS |
| TATCTTTAGAAGTTAGGTAT+AGG | 0.311418 | 7_3:-32912185 | Msa1101850:CDS |
| TTCGCCATGTACGGTATATT+GGG | 0.311879 | 7_3:-32909692 | Msa1101850:CDS |
| TTTGGATTCAGATTTGTCTA+AGG | 0.320621 | 7_3:-32910101 | Msa1101850:intron |
| ATCCCCAAATCAAATATTAA+TGG | 0.327088 | 7_3:-32912069 | Msa1101850:intron |
| TTTATATTGGATGGCCATTA+GGG | 0.327462 | 7_3:-32909656 | None:intergenic |
| AGGGTGACATAAAGTTTAAT+TGG | 0.350901 | 7_3:-32912287 | Msa1101850:CDS |
| ATCTTTAGAAGTTAGGTATA+GGG | 0.397217 | 7_3:-32912184 | Msa1101850:CDS |
| CCCTCTCGACAACGGCAATA+AGG | 0.397415 | 7_3:-32909832 | Msa1101850:CDS |
| TGATTTGGTTCTTCCTCAAC+CGG | 0.404195 | 7_3:-32909759 | Msa1101850:CDS |
| TTATCTATTTGAAAATCCTT+TGG | 0.432958 | 7_3:-32912124 | Msa1101850:CDS |
| ACTTCTAAAGATAGACAATC+TGG | 0.436157 | 7_3:+32912195 | None:intergenic |
| GAAGAGAACTTGAGGCATAA+AGG | 0.443186 | 7_3:+32909734 | None:intergenic |
| TGCCTCAAGTTCTCTTCAGA+TGG | 0.461584 | 7_3:-32909728 | Msa1101850:CDS |
| TGGAAGAAATCTATTAAACT+TGG | 0.464368 | 7_3:-32912147 | Msa1101850:CDS |
| AGCAAATATGGGTTCGAAGA+TGG | 0.472593 | 7_3:-32915923 | None:intergenic |
| AGGCATAAAGGTACCGGTTG+AGG | 0.473604 | 7_3:+32909746 | None:intergenic |
| ATCTAGCGAATTCGAACGGT+TGG | 0.478140 | 7_3:-32910030 | Msa1101850:CDS |
| CACAATTGATGATAGTGAAA+AGG | 0.479164 | 7_3:-32910469 | Msa1101850:CDS |
| CACAATTGATGATAGTGAAA+AGG | 0.479164 | 7_3:-32912670 | Msa1101850:CDS |
| ATCAACATCAACACGGTTAG+CGG | 0.485787 | 7_3:-32909786 | Msa1101850:CDS |
| TCATCAATTGTGTTCTCAGC+AGG | 0.498222 | 7_3:+32910480 | None:intergenic |
| TCATCAATTGTGTTCTCAGC+AGG | 0.498222 | 7_3:+32912681 | None:intergenic |
| TAATTGGTTTCCAAATTTCT+CGG | 0.498589 | 7_3:-32912271 | Msa1101850:CDS |
| TCCTTATTGCCGTTGTCGAG+AGG | 0.506075 | 7_3:+32909831 | None:intergenic |
| ATCCAATATAAAAGAGGCTA+TGG | 0.511344 | 7_3:+32909667 | None:intergenic |
| ATTTGAAAATCCTTTGGTAG+AGG | 0.511453 | 7_3:-32912118 | Msa1101850:CDS |
| GCCTCAAGTTCTCTTCAGAT+GGG | 0.514336 | 7_3:-32909727 | Msa1101850:CDS |
| AAGAGAGAGTTCGCCATGTA+CGG | 0.520977 | 7_3:-32909701 | Msa1101850:CDS |
| CCTTATTGCCGTTGTCGAGA+GGG | 0.525198 | 7_3:+32909832 | None:intergenic |
| TTGGATTCAGATTTGTCTAA+GGG | 0.526335 | 7_3:-32910100 | Msa1101850:intron |
| TGAAAATCCTTTGGTAGAGG+TGG | 0.528555 | 7_3:-32912115 | Msa1101850:CDS |
| TACCATTAATATTTGATTTG+GGG | 0.529935 | 7_3:+32912067 | None:intergenic |
| AACTTGAGGCATAAAGGTAC+CGG | 0.555236 | 7_3:+32909740 | None:intergenic |
| GAGAGGGCTACATGAAAGCC+AGG | 0.559671 | 7_3:+32909848 | None:intergenic |
| ATTAGGGTATTAGGAATACC+TGG | 0.565957 | 7_3:-32909866 | Msa1101850:CDS |
| ATGGCCATCCAATATAAAAG+AGG | 0.568952 | 7_3:+32909661 | None:intergenic |
| TCATCAATCATCACTCCGAA+TGG | 0.572242 | 7_3:-32912721 | Msa1101850:CDS |
| CCCCATCTGAAGAGAACTTG+AGG | 0.579491 | 7_3:+32909726 | None:intergenic |
| GGTCCCCAATATACCGTACA+TGG | 0.581393 | 7_3:+32909688 | None:intergenic |
| TCTAGCGAATTCGAACGCCT+TGG | 0.591653 | 7_3:-32912235 | Msa1101850:CDS |
| TTGGATTCAGATTTGTGTGA+GGG | 0.598838 | 7_3:-32912306 | Msa1101850:intron |
| TCATCAATCATCACTCCGAA+TGG | 0.612308 | 7_3:-32910520 | Msa1101850:CDS |
| TCAGTGTCCACCTCTACCAA+AGG | 0.616602 | 7_3:+32912108 | None:intergenic |
| TCTGATCTAGCGAATTCGAA+CGG | 0.627124 | 7_3:-32910034 | Msa1101850:CDS |
| ACAACGGCAATAAGGAGAGA+AGG | 0.629591 | 7_3:-32909824 | Msa1101850:CDS |
| TCATGTAGCCCTCTCGACAA+CGG | 0.631243 | 7_3:-32909840 | Msa1101850:CDS |
| AACATCAACACGGTTAGCGG+CGG | 0.656218 | 7_3:-32909783 | Msa1101850:CDS |
| TTTGGATTCAGATTTGTGTG+AGG | 0.656640 | 7_3:-32912307 | Msa1101850:intron |
| TCGCCATGTACGGTATATTG+GGG | 0.657155 | 7_3:-32909691 | Msa1101850:CDS |
| CCTCAAGTTCTCTTCAGATG+GGG | 0.658827 | 7_3:-32909726 | Msa1101850:CDS |
| AACAAACATCAACATCAACA+CGG | 0.699037 | 7_3:-32909793 | Msa1101850:CDS |
| AGCATCTATAGTCACAACCA+AGG | 0.708480 | 7_3:+32912218 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr7_3:32912334-32912353 | None:intergenic | 0.0% |
| !! | TGATTTATAAAATTAAACAT+TGG | + | chr7_3:32910474-32910493 | None:intergenic | 10.0% |
| !!! | TGTTTAATTTTATAAATCAA+TGG | - | chr7_3:32910475-32910494 | Msa1101850:CDS | 10.0% |
| !! | TTATTAAATTTCATCATATT+CGG | - | chr7_3:32911644-32911663 | Msa1101850:intron | 10.0% |
| !! | ATATATATATATATATAGGA+AGG | + | chr7_3:32914559-32914578 | None:intergenic | 10.0% |
| !!! | TATAAATAGTAGTTTTTCAT+AGG | - | chr7_3:32909829-32909848 | Msa1101850:CDS | 15.0% |
| !!! | AATTGTTGTTAGAAATTTTT+TGG | + | chr7_3:32910505-32910524 | None:intergenic | 15.0% |
| !!! | TTTAGAGTTAATTAAGTTTT+TGG | - | chr7_3:32910579-32910598 | Msa1101850:intron | 15.0% |
| !!! | AAGTGTGATTTATTTTTATA+GGG | + | chr7_3:32910637-32910656 | None:intergenic | 15.0% |
| !!! | AAAGTGTGATTTATTTTTAT+AGG | + | chr7_3:32910638-32910657 | None:intergenic | 15.0% |
| !!! | TAAAAATAAATCACACTTTT+TGG | - | chr7_3:32910639-32910658 | Msa1101850:intron | 15.0% |
| !!! | AAAATTTTCATCAACATTTT+TGG | - | chr7_3:32910733-32910752 | Msa1101850:intron | 15.0% |
| !!! | AAAGTGTGATTTTATTTTAT+AGG | - | chr7_3:32910792-32910811 | Msa1101850:intron | 15.0% |
| !!! | AAGTGTGATTTTATTTTATA+GGG | - | chr7_3:32910793-32910812 | Msa1101850:intron | 15.0% |
| !! | ACAAAATTGTGAATATTTAT+AGG | - | chr7_3:32910823-32910842 | Msa1101850:intron | 15.0% |
| !!! | TTATCATAATTTTGTTATAC+TGG | + | chr7_3:32910963-32910982 | None:intergenic | 15.0% |
| !!! | ATTATGATAAAACATTGTTT+TGG | - | chr7_3:32910973-32910992 | Msa1101850:intron | 15.0% |
| !!! | TTTAAGTGATTAAATTTTGA+AGG | - | chr7_3:32911333-32911352 | Msa1101850:intron | 15.0% |
| !!! | TTAAGTGATTAAATTTTGAA+GGG | - | chr7_3:32911334-32911353 | Msa1101850:intron | 15.0% |
| !!! | TATCATTACTCTTTAAATTT+TGG | + | chr7_3:32911390-32911409 | None:intergenic | 15.0% |
| !!! | AATTAAACATTTTAACATCA+AGG | + | chr7_3:32911859-32911878 | None:intergenic | 15.0% |
| !! | TGAAAATGAAATTATTTCAA+TGG | + | chr7_3:32912189-32912208 | None:intergenic | 15.0% |
| !! | CAAAGAAATTAAAGAATTTA+TGG | - | chr7_3:32912254-32912273 | Msa1101850:CDS | 15.0% |
| !! | TATATATGTTCTTAATCTTA+GGG | + | chr7_3:32912321-32912340 | None:intergenic | 15.0% |
| !! | ATATATATGTTCTTAATCTT+AGG | + | chr7_3:32912322-32912341 | None:intergenic | 15.0% |
| !! | AAAAACTATGTATATATTAG+TGG | + | chr7_3:32912776-32912795 | None:intergenic | 15.0% |
| !!! | TTTTAATTTTGTAAGGTTTT+AGG | + | chr7_3:32913030-32913049 | None:intergenic | 15.0% |
| !!! | AACTATAATTTTCTTCATAT+TGG | - | chr7_3:32913130-32913149 | Msa1101850:intron | 15.0% |
| !!! | ACTATAATTTTCTTCATATT+GGG | - | chr7_3:32913131-32913150 | Msa1101850:intron | 15.0% |
| !!! | TTACCATTAATATTTGATTT+GGG | + | chr7_3:32913511-32913530 | None:intergenic | 15.0% |
| !! | ATTACCATTAATATTTGATT+TGG | + | chr7_3:32913512-32913531 | None:intergenic | 15.0% |
| !! | AAATATTAATGGTAATAATC+AGG | - | chr7_3:32913516-32913535 | Msa1101850:intron | 15.0% |
| !! | AATATTAATGGTAATAATCA+GGG | - | chr7_3:32913517-32913536 | Msa1101850:intron | 15.0% |
| !!! | TGGATTTTATATATATGTTA+TGG | - | chr7_3:32913556-32913575 | Msa1101850:intron | 15.0% |
| !! | CATAAATAAAATAAAAAGAG+AGG | + | chr7_3:32913685-32913704 | None:intergenic | 15.0% |
| !!! | CTTTTTATTTTATTTATGAG+TGG | - | chr7_3:32913687-32913706 | Msa1101850:intron | 15.0% |
| !! | AATTATTATTACACATTAAG+TGG | - | chr7_3:32913875-32913894 | Msa1101850:intron | 15.0% |
| !! | AAAAACTATGTATATATTAG+TGG | + | chr7_3:32912776-32912795 | None:intergenic | 15.0% |
| !!! | AACTATAATTTTCTTCATAT+TGG | - | chr7_3:32913130-32913149 | Msa1101850:intron | 15.0% |
| !!! | ACTATAATTTTCTTCATATT+GGG | - | chr7_3:32913131-32913150 | Msa1101850:intron | 15.0% |
| !! | AAGAACACTTAAAGAAAAAA+GGG | + | chr7_3:32909979-32909998 | None:intergenic | 20.0% |
| !! | TTTCTCTATAAATATGTCTT+GGG | + | chr7_3:32910223-32910242 | None:intergenic | 20.0% |
| !!! | TGTTGATGGAAAATTTTATA+AGG | + | chr7_3:32910697-32910716 | None:intergenic | 20.0% |
| !! | ATAAAGACTAAAAATGTTGA+TGG | + | chr7_3:32910711-32910730 | None:intergenic | 20.0% |
| !!! | TAAGTGATTAAATTTTGAAG+GGG | - | chr7_3:32911335-32911354 | Msa1101850:intron | 20.0% |
| !! | AATAAGAAATGAGAAAAACA+AGG | + | chr7_3:32911448-32911467 | None:intergenic | 20.0% |
| !!! | TTGTTTTTCTCATTTCTTAT+TGG | - | chr7_3:32911447-32911466 | Msa1101850:intron | 20.0% |
| !! | TTAATAAGCTTATTGATCAA+TGG | + | chr7_3:32911631-32911650 | None:intergenic | 20.0% |
| !!! | ACAATAACTCTTTTCATATA+TGG | + | chr7_3:32911963-32911982 | None:intergenic | 20.0% |
| !!! | TTATGGTGTAATAGTAATTT+TGG | + | chr7_3:32912105-32912124 | None:intergenic | 20.0% |
| !! | TAGTAAAGTTCAAAGATTAA+GGG | + | chr7_3:32912526-32912545 | None:intergenic | 20.0% |
| !! | TTAGTAAAGTTCAAAGATTA+AGG | + | chr7_3:32912527-32912546 | None:intergenic | 20.0% |
| !! | ACTTATGAAAACTTATAAAC+TGG | - | chr7_3:32912681-32912700 | Msa1101850:CDS | 20.0% |
| !! | CAAAATAAAAAGAATCCATT+CGG | + | chr7_3:32912871-32912890 | None:intergenic | 20.0% |
| !!! | TCTATGGTTTTAATTTTGTA+AGG | + | chr7_3:32913037-32913056 | None:intergenic | 20.0% |
| !!! | ATAGGGTTTGTTATAAATTA+TGG | - | chr7_3:32913407-32913426 | Msa1101850:intron | 20.0% |
| !! | TTATCTATTTGAAAATCCTT+TGG | - | chr7_3:32913450-32913469 | Msa1101850:intron | 20.0% |
| !!! | TACCATTAATATTTGATTTG+GGG | + | chr7_3:32913510-32913529 | None:intergenic | 20.0% |
| !! | TGTAATATGTCTAGTAATTA+TGG | - | chr7_3:32913712-32913731 | Msa1101850:intron | 20.0% |
| !!! | TACAAATTCTAAAAAGCATA+AGG | + | chr7_3:32913761-32913780 | None:intergenic | 20.0% |
| !!! | TAATCAAACTTGAACTTTTT+TGG | - | chr7_3:32913833-32913852 | Msa1101850:intron | 20.0% |
| !! | TCACTAAATCATTTAACATA+TGG | - | chr7_3:32913948-32913967 | Msa1101850:intron | 20.0% |
| !! | CACTAAATCATTTAACATAT+GGG | - | chr7_3:32913949-32913968 | Msa1101850:intron | 20.0% |
| !! | ACTAAATCATTTAACATATG+GGG | - | chr7_3:32913950-32913969 | Msa1101850:intron | 20.0% |
| !! | CATTAAAAGTTACTATTTAG+AGG | + | chr7_3:32914207-32914226 | None:intergenic | 20.0% |
| !! | TCACACATATTAAGAATTTA+TGG | - | chr7_3:32914499-32914518 | Msa1101850:intron | 20.0% |
| !!! | TGTCTTTAATTTATTAAGCA+AGG | + | chr7_3:32914529-32914548 | None:intergenic | 20.0% |
| !! | TGCTTAATAAATTAAAGACA+TGG | - | chr7_3:32914529-32914548 | Msa1101850:intron | 20.0% |
| !! | TAGTAAAGTTCAAAGATTAA+GGG | + | chr7_3:32912526-32912545 | None:intergenic | 20.0% |
| !! | TTAGTAAAGTTCAAAGATTA+AGG | + | chr7_3:32912527-32912546 | None:intergenic | 20.0% |
| !! | TATCAAGGATATTAAGAATT+AGG | - | chr7_3:32915691-32915710 | Msa1101850:intron | 20.0% |
| !! | ATCAAGGATATTAAGAATTA+GGG | - | chr7_3:32915692-32915711 | Msa1101850:intron | 20.0% |
| !!! | ATATTAAGAATTAGGGTATT+AGG | - | chr7_3:32915699-32915718 | Msa1101850:intron | 20.0% |
| !! | GTAGTTTTTCATAGGAAAAA+CGG | - | chr7_3:32909837-32909856 | Msa1101850:CDS | 25.0% |
| !! | TAGTTTTTCATAGGAAAAAC+GGG | - | chr7_3:32909838-32909857 | Msa1101850:CDS | 25.0% |
| !!! | TGCATTGATTAAATAAGAGT+TGG | + | chr7_3:32909951-32909970 | None:intergenic | 25.0% |
| ! | CAAGAACACTTAAAGAAAAA+AGG | + | chr7_3:32909980-32909999 | None:intergenic | 25.0% |
| !! | TTGTTAGAAATTCTGTGTTT+TGG | + | chr7_3:32910082-32910101 | None:intergenic | 25.0% |
| ! | TTCTCTATAAATATGTCTTG+GGG | + | chr7_3:32910222-32910241 | None:intergenic | 25.0% |
| ! | CTTTCTCTATAAATATGTCT+TGG | + | chr7_3:32910224-32910243 | None:intergenic | 25.0% |
| ! | AGACATATTTATAGAGAAAG+TGG | - | chr7_3:32910224-32910243 | Msa1101850:intron | 25.0% |
| ! | AATAGATATTAGACATCACA+TGG | + | chr7_3:32910407-32910426 | None:intergenic | 25.0% |
| !! | CACTAACGAAAAATTTTGTA+GGG | + | chr7_3:32910666-32910685 | None:intergenic | 25.0% |
| !! | ACACTAACGAAAAATTTTGT+AGG | + | chr7_3:32910667-32910686 | None:intergenic | 25.0% |
| !! | ACATTTTCCTTAAGCATTTA+GGG | + | chr7_3:32910760-32910779 | None:intergenic | 25.0% |
| !!! | AGACTTTTTTAAATCTGCAT+TGG | + | chr7_3:32910935-32910954 | None:intergenic | 25.0% |
| ! | AGCATGTGTTGAAAATTTAT+CGG | + | chr7_3:32911076-32911095 | None:intergenic | 25.0% |
| ! | TTTCCAATTACGATCATAAA+GGG | + | chr7_3:32911100-32911119 | None:intergenic | 25.0% |
| ! | AGAAGAAGAAGATTATGAAT+TGG | - | chr7_3:32911129-32911148 | Msa1101850:intron | 25.0% |
| ! | ATTATGAATTGGAATGTAGA+GGG | - | chr7_3:32911140-32911159 | Msa1101850:intron | 25.0% |
| !!! | AACCACTTTTTAACAACTTT+TGG | + | chr7_3:32911545-32911564 | None:intergenic | 25.0% |
| ! | TTAAATGATCCATATTTGCA+AGG | - | chr7_3:32911587-32911606 | Msa1101850:intron | 25.0% |
| !!! | TGTTTTTGGCGATAAAATAT+TGG | - | chr7_3:32911723-32911742 | Msa1101850:intron | 25.0% |
| !!! | GTTTTTGGCGATAAAATATT+GGG | - | chr7_3:32911724-32911743 | Msa1101850:intron | 25.0% |
| !!! | TTTTTGGCGATAAAATATTG+GGG | - | chr7_3:32911725-32911744 | Msa1101850:intron | 25.0% |
| ! | ACTAACAAAATGCATAATCA+GGG | + | chr7_3:32911827-32911846 | None:intergenic | 25.0% |
| !! | TGTCTTTAATTTATTGAGCA+AGG | + | chr7_3:32912284-32912303 | None:intergenic | 25.0% |
| ! | TGCTCAATAAATTAAAGACA+TGG | - | chr7_3:32912284-32912303 | Msa1101850:CDS | 25.0% |
| !!! | TTTTTTTATGACGTTGTTGT+TGG | + | chr7_3:32912957-32912976 | None:intergenic | 25.0% |
| !! | TACTGAAAGATTTTCTTCTA+TGG | + | chr7_3:32913053-32913072 | None:intergenic | 25.0% |
| !! | TAATTTTCTTCATATTGGGT+TGG | - | chr7_3:32913135-32913154 | Msa1101850:intron | 25.0% |
| !! | AGACTGAATCTTCAAATTTT+TGG | + | chr7_3:32913240-32913259 | None:intergenic | 25.0% |
| ! | AAAATTTGAAGATTCAGTCT+TGG | - | chr7_3:32913240-32913259 | Msa1101850:intron | 25.0% |
| !! | TAATTGGTTTCCAAATTTCT+CGG | - | chr7_3:32913303-32913322 | Msa1101850:intron | 25.0% |
| !! | ATTGTCTATCTTTAGAAGTT+AGG | - | chr7_3:32913383-32913402 | Msa1101850:intron | 25.0% |
| !! | TATCTTTAGAAGTTAGGTAT+AGG | - | chr7_3:32913389-32913408 | Msa1101850:intron | 25.0% |
| !! | ATCTTTAGAAGTTAGGTATA+GGG | - | chr7_3:32913390-32913409 | Msa1101850:intron | 25.0% |
| ! | TGGAAGAAATCTATTAAACT+TGG | - | chr7_3:32913427-32913446 | Msa1101850:intron | 25.0% |
| ! | ATCCCCAAATCAAATATTAA+TGG | - | chr7_3:32913505-32913524 | Msa1101850:intron | 25.0% |
| ! | AGGGTTAAGTATATAATCAA+TGG | - | chr7_3:32913536-32913555 | Msa1101850:intron | 25.0% |
| ! | TTATAAAATTGCATGGTGAA+AGG | + | chr7_3:32914144-32914163 | None:intergenic | 25.0% |
| !! | TTCACCATGCAATTTTATAA+TGG | - | chr7_3:32914144-32914163 | Msa1101850:intron | 25.0% |
| !! | TCACCATGCAATTTTATAAT+GGG | - | chr7_3:32914145-32914164 | Msa1101850:intron | 25.0% |
| ! | TTTCCCATTATAAAATTGCA+TGG | + | chr7_3:32914151-32914170 | None:intergenic | 25.0% |
| ! | AATATGTGTAATCAATGCAT+TGG | - | chr7_3:32914229-32914248 | Msa1101850:intron | 25.0% |
| ! | CTGATTATAGAAGCAAATTA+TGG | - | chr7_3:32914395-32914414 | Msa1101850:intron | 25.0% |
| !! | AATTTGTTTGAGAATTTGGA+GGG | + | chr7_3:32914440-32914459 | None:intergenic | 25.0% |
| !!! | TAATTTGTTTGAGAATTTGG+AGG | + | chr7_3:32914441-32914460 | None:intergenic | 25.0% |
| !!! | GAGTAATTTGTTTGAGAATT+TGG | + | chr7_3:32914444-32914463 | None:intergenic | 25.0% |
| ! | CAAAATAAAAAGAAGCCATT+CGG | + | chr7_3:32915072-32915091 | None:intergenic | 25.0% |
| ! | TGCTTATAAAATTTGACTAG+TGG | + | chr7_3:32915186-32915205 | None:intergenic | 25.0% |
| !! | TCTATTGTTGTGATTTTGTA+AGG | + | chr7_3:32915240-32915259 | None:intergenic | 25.0% |
| !! | TAATTTTCTTCATATTGGGT+TGG | - | chr7_3:32913135-32913154 | Msa1101850:intron | 25.0% |
| !! | AGACTGAATCTTCAAATTTT+TGG | + | chr7_3:32913240-32913259 | None:intergenic | 25.0% |
| ! | CAACAATTATGAATCAATAG+CGG | - | chr7_3:32915615-32915634 | Msa1101850:intron | 25.0% |
| TTGAGTGTAAGTTTGTATGA+TGG | + | chr7_3:32909872-32909891 | None:intergenic | 30.0% | |
| CAATATGTCCTAAGATTTAC+TGG | - | chr7_3:32910114-32910133 | Msa1101850:intron | 30.0% | |
| AAGATCAACCAGTAAATCTT+AGG | + | chr7_3:32910125-32910144 | None:intergenic | 30.0% | |
| TATTTATAGAGAAAGTGGAG+AGG | - | chr7_3:32910229-32910248 | Msa1101850:intron | 30.0% | |
| ATTTATAGAGAAAGTGGAGA+GGG | - | chr7_3:32910230-32910249 | Msa1101850:intron | 30.0% | |
| GTGACTATTCATGAAAGAAT+TGG | + | chr7_3:32910291-32910310 | None:intergenic | 30.0% | |
| TTCTTTCATGAATAGTCACT+AGG | - | chr7_3:32910292-32910311 | Msa1101850:intron | 30.0% | |
| CCATTCAACTCTTTATGAAA+GGG | + | chr7_3:32910330-32910349 | None:intergenic | 30.0% | |
| ACCATTCAACTCTTTATGAA+AGG | + | chr7_3:32910331-32910350 | None:intergenic | 30.0% | |
| TAGTTGAATGAATCCATGAT+GGG | + | chr7_3:32910358-32910377 | None:intergenic | 30.0% | |
| ATAGTTGAATGAATCCATGA+TGG | + | chr7_3:32910359-32910378 | None:intergenic | 30.0% | |
| TCATGGATTCATTCAACTAT+AGG | - | chr7_3:32910359-32910378 | Msa1101850:intron | 30.0% | |
| TGGTTGAATAGTATCTTGAT+GGG | + | chr7_3:32910454-32910473 | None:intergenic | 30.0% | |
| TTGGTTGAATAGTATCTTGA+TGG | + | chr7_3:32910455-32910474 | None:intergenic | 30.0% | |
| AATTACAAGCCAAGTACAAA+AGG | - | chr7_3:32910521-32910540 | Msa1101850:CDS | 30.0% | |
| ! | CAAGATTTTCCTTTTGTACT+TGG | + | chr7_3:32910533-32910552 | None:intergenic | 30.0% |
| TACCAAGTTGCACAAATTAT+TGG | + | chr7_3:32910556-32910575 | None:intergenic | 30.0% | |
| ! | GACATTTTCCTTAAGCATTT+AGG | + | chr7_3:32910761-32910780 | None:intergenic | 30.0% |
| ATATCCAGGTCTTAAAATCT+CGG | + | chr7_3:32910868-32910887 | None:intergenic | 30.0% | |
| ! | CTTTTGCTAAACTAATATCC+AGG | + | chr7_3:32910882-32910901 | None:intergenic | 30.0% |
| ! | TTTTGGATATCAGTTTCGTA+GGG | - | chr7_3:32910990-32911009 | Msa1101850:intron | 30.0% |
| CTTTCCAATTACGATCATAA+AGG | + | chr7_3:32911101-32911120 | None:intergenic | 30.0% | |
| CTTTATGATCGTAATTGGAA+AGG | - | chr7_3:32911099-32911118 | Msa1101850:intron | 30.0% | |
| GATTATGAATTGGAATGTAG+AGG | - | chr7_3:32911139-32911158 | Msa1101850:intron | 30.0% | |
| CAATTGTCTGATAAGTTCAA+GGG | - | chr7_3:32911216-32911235 | Msa1101850:intron | 30.0% | |
| GCAATGATTAATTGAGCTTA+GGG | - | chr7_3:32911303-32911322 | Msa1101850:intron | 30.0% | |
| ATGCTAGAATTAACGATTAC+AGG | - | chr7_3:32911362-32911381 | Msa1101850:intron | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | + | chr7_3:32911422-32911441 | None:intergenic | 30.0% | |
| TTCTTATTGGCCAAAAACAA+TGG | - | chr7_3:32911460-32911479 | Msa1101850:intron | 30.0% | |
| ! | TTTTCTCTCTCCATTGTTTT+TGG | + | chr7_3:32911473-32911492 | None:intergenic | 30.0% |
| GTCCAAAAGTTGTTAAAAAG+TGG | - | chr7_3:32911540-32911559 | Msa1101850:intron | 30.0% | |
| ATGTTTAGTCCTTGCAAATA+TGG | + | chr7_3:32911599-32911618 | None:intergenic | 30.0% | |
| TTCATCATATTCGGAGTTAA+TGG | - | chr7_3:32911653-32911672 | Msa1101850:intron | 30.0% | |
| GGTAGTATAATAATACGACT+TGG | - | chr7_3:32911674-32911693 | Msa1101850:intron | 30.0% | |
| GACTAACAAAATGCATAATC+AGG | + | chr7_3:32911828-32911847 | None:intergenic | 30.0% | |
| !!! | GAAAGATTATTTTAGTGTCG+AGG | - | chr7_3:32911990-32912009 | Msa1101850:intron | 30.0% |
| AAAATGACTAATCATTACCG+AGG | - | chr7_3:32912077-32912096 | Msa1101850:CDS | 30.0% | |
| AAATGACTAATCATTACCGA+GGG | - | chr7_3:32912078-32912097 | Msa1101850:CDS | 30.0% | |
| !! | TAATAGTAATTTTGGTCCCT+CGG | + | chr7_3:32912097-32912116 | None:intergenic | 30.0% |
| !! | AGAGACTTGTTAAGAGATAA+TGG | + | chr7_3:32912433-32912452 | None:intergenic | 30.0% |
| !! | AAGAATTTAGCTTGTTGAAG+GGG | + | chr7_3:32912724-32912743 | None:intergenic | 30.0% |
| !! | GAAGAATTTAGCTTGTTGAA+GGG | + | chr7_3:32912725-32912744 | None:intergenic | 30.0% |
| !! | AGAAGAATTTAGCTTGTTGA+AGG | + | chr7_3:32912726-32912745 | None:intergenic | 30.0% |
| TAATTTACCGCATATTTCAC+AGG | - | chr7_3:32912823-32912842 | Msa1101850:intron | 30.0% | |
| AATTTACCGCATATTTCACA+GGG | - | chr7_3:32912824-32912843 | Msa1101850:intron | 30.0% | |
| ! | CACAATTGATGATAGTGAAA+AGG | - | chr7_3:32912904-32912923 | Msa1101850:intron | 30.0% |
| !! | TTAAGTGTTGCTTGTGAAAA+TGG | + | chr7_3:32913187-32913206 | None:intergenic | 30.0% |
| AGGGTGACATAAAGTTTAAT+TGG | - | chr7_3:32913287-32913306 | Msa1101850:intron | 30.0% | |
| ! | ACTTCTAAAGATAGACAATC+TGG | + | chr7_3:32913382-32913401 | None:intergenic | 30.0% |
| ATTTGAAAATCCTTTGGTAG+AGG | - | chr7_3:32913456-32913475 | Msa1101850:intron | 30.0% | |
| AGAATAAAGTATGCCATGTT+TGG | - | chr7_3:32913594-32913613 | Msa1101850:intron | 30.0% | |
| CAAAAGAGATTGAATCAGAA+TGG | - | chr7_3:32913634-32913653 | Msa1101850:intron | 30.0% | |
| TATGTCTAGTAATTATGGCT+TGG | - | chr7_3:32913717-32913736 | Msa1101850:intron | 30.0% | |
| CAAAGGTGAAATGTAAATTC+TGG | + | chr7_3:32913795-32913814 | None:intergenic | 30.0% | |
| CAATTGTTACTCTCTTTCAA+AGG | + | chr7_3:32913812-32913831 | None:intergenic | 30.0% | |
| TTCTATAATCAGCAGAATCA+TGG | + | chr7_3:32914387-32914406 | None:intergenic | 30.0% | |
| GCAAATGACCTAGTTAATTA+GGG | + | chr7_3:32914474-32914493 | None:intergenic | 30.0% | |
| AGCAAATGACCTAGTTAATT+AGG | + | chr7_3:32914475-32914494 | None:intergenic | 30.0% | |
| !! | AGAGACTTGTTAAGAGATAA+TGG | + | chr7_3:32912433-32912452 | None:intergenic | 30.0% |
| GCTTATGAAAACCTATAAAC+TGG | - | chr7_3:32914885-32914904 | Msa1101850:intron | 30.0% | |
| ATGCATTTAAGCCAGTTTAT+AGG | + | chr7_3:32912695-32912714 | None:intergenic | 30.0% | |
| AAGAAATTAGCATGTTGAAG+GGG | + | chr7_3:32914928-32914947 | None:intergenic | 30.0% | |
| GAAGAAATTAGCATGTTGAA+GGG | + | chr7_3:32914929-32914948 | None:intergenic | 30.0% | |
| AGAAGAAATTAGCATGTTGA+AGG | + | chr7_3:32914930-32914949 | None:intergenic | 30.0% | |
| TAATTTACCGCATATTTCAC+AGG | - | chr7_3:32912823-32912842 | Msa1101850:intron | 30.0% | |
| ! | CACAATTGATGATAGTGAAA+AGG | - | chr7_3:32912904-32912923 | Msa1101850:intron | 30.0% |
| TTCCAATATTCCAACAACAA+CGG | - | chr7_3:32912944-32912963 | Msa1101850:intron | 30.0% | |
| !!! | TTTTTTTATGCCGTTGTTGT+TGG | + | chr7_3:32915158-32915177 | None:intergenic | 30.0% |
| TTTGGATTCAGATTTGTCTA+AGG | - | chr7_3:32915473-32915492 | Msa1101850:intron | 30.0% | |
| TTGGATTCAGATTTGTCTAA+GGG | - | chr7_3:32915474-32915493 | Msa1101850:intron | 30.0% | |
| GCATTGAACATGATTATGAT+CGG | - | chr7_3:32915649-32915668 | Msa1101850:intron | 30.0% | |
| ! | ACGACATGTTTGATTTATCA+AGG | - | chr7_3:32915676-32915695 | Msa1101850:intron | 30.0% |
| AACAAACATCAACATCAACA+CGG | - | chr7_3:32915781-32915800 | Msa1101850:intron | 30.0% | |
| ATCCAATATAAAAGAGGCTA+TGG | + | chr7_3:32915910-32915929 | None:intergenic | 30.0% | |
| ! | ATAGCCTCTTTTATATTGGA+TGG | - | chr7_3:32915909-32915928 | Msa1101850:CDS | 30.0% |
| ! | TTCGATAAAGCAGTTTTCGA+AGG | - | chr7_3:32909682-32909701 | Msa1101850:CDS | 35.0% |
| ! | TTTTCGAAGGTGGTTATCAA+CGG | - | chr7_3:32909695-32909714 | Msa1101850:CDS | 35.0% |
| !! | TAAGTAAAACTGTCGACTTG+TGG | - | chr7_3:32909759-32909778 | Msa1101850:CDS | 35.0% |
| ! | TTACACTCAAAGTATCCGTA+TGG | - | chr7_3:32909882-32909901 | Msa1101850:intron | 35.0% |
| TAAGTTCGATTGAGTTCAAG+TGG | - | chr7_3:32910013-32910032 | Msa1101850:intron | 35.0% | |
| GAAAATCCAACGTAAACACA+TGG | - | chr7_3:32910179-32910198 | Msa1101850:intron | 35.0% | |
| TTTATAGAGAAAGTGGAGAG+GGG | - | chr7_3:32910231-32910250 | Msa1101850:intron | 35.0% | |
| CATTGTAACCCTACATGAAA+GGG | + | chr7_3:32910262-32910281 | None:intergenic | 35.0% | |
| CAACTCTTTATGAAAGGGTA+TGG | + | chr7_3:32910325-32910344 | None:intergenic | 35.0% | |
| CCCTTTCATAAAGAGTTGAA+TGG | - | chr7_3:32910327-32910346 | Msa1101850:intron | 35.0% | |
| GATATTAGACATCACATGGT+AGG | + | chr7_3:32910403-32910422 | None:intergenic | 35.0% | |
| ! | AATAGTATCTTGATGGGTCT+TGG | + | chr7_3:32910448-32910467 | None:intergenic | 35.0% |
| ! | TGCCAATAATTTGTGCAACT+TGG | - | chr7_3:32910551-32910570 | Msa1101850:intron | 35.0% |
| ! | TTTTGGTCCCTAAATGCTTA+AGG | - | chr7_3:32910750-32910769 | Msa1101850:intron | 35.0% |
| ATGCTTAAGGAAAATGTCAC+AGG | - | chr7_3:32910763-32910782 | Msa1101850:intron | 35.0% | |
| TGCTTAAGGAAAATGTCACA+GGG | - | chr7_3:32910764-32910783 | Msa1101850:intron | 35.0% | |
| TATCCAGGTCTTAAAATCTC+GGG | + | chr7_3:32910867-32910886 | None:intergenic | 35.0% | |
| !! | GTTTTGGATATCAGTTTCGT+AGG | - | chr7_3:32910989-32911008 | Msa1101850:intron | 35.0% |
| CTTCCCTTTATGATCGTAAT+TGG | - | chr7_3:32911094-32911113 | Msa1101850:intron | 35.0% | |
| TGAGGGAAACAAGAACAATA+TGG | - | chr7_3:32911176-32911195 | Msa1101850:intron | 35.0% | |
| GAGGGAAACAAGAACAATAT+GGG | - | chr7_3:32911177-32911196 | Msa1101850:intron | 35.0% | |
| CAAGAACAATATGGGTATTC+TGG | - | chr7_3:32911185-32911204 | Msa1101850:intron | 35.0% | |
| GCAATTGTCTGATAAGTTCA+AGG | - | chr7_3:32911215-32911234 | Msa1101850:intron | 35.0% | |
| TGACTGTTAATTGGTCAAGT+TGG | + | chr7_3:32911260-32911279 | None:intergenic | 35.0% | |
| GGCAATGATTAATTGAGCTT+AGG | - | chr7_3:32911302-32911321 | Msa1101850:intron | 35.0% | |
| GAGAGAGAAAAAAGAAGAGA+GGG | - | chr7_3:32911482-32911501 | Msa1101850:intron | 35.0% | |
| AGAGAGAAAAAAGAAGAGAG+GGG | - | chr7_3:32911483-32911502 | Msa1101850:intron | 35.0% | |
| TATTGGGGTAATAGTCACTT+TGG | - | chr7_3:32911740-32911759 | Msa1101850:intron | 35.0% | |
| TTGAAGTTGTGGTACATTGA+AGG | + | chr7_3:32911798-32911817 | None:intergenic | 35.0% | |
| ! | TTTTGTCGTATTCTCAGCTT+GGG | + | chr7_3:32912136-32912155 | None:intergenic | 35.0% |
| ! | ATTTTGTCGTATTCTCAGCT+TGG | + | chr7_3:32912137-32912156 | None:intergenic | 35.0% |
| TCATTTCCTTGTCTCTTTCT+AGG | - | chr7_3:32912206-32912225 | Msa1101850:CDS | 35.0% | |
| AAGTTACCTAGAAAGAGACA+AGG | + | chr7_3:32912215-32912234 | None:intergenic | 35.0% | |
| TGTCTCTTTCTAGGTAACTT+CGG | - | chr7_3:32912215-32912234 | Msa1101850:CDS | 35.0% | |
| TACTTGACAAAGTGCAGATT+AGG | + | chr7_3:32912467-32912486 | None:intergenic | 35.0% | |
| ! | TGACGTTGTTGTTGGAATAT+TGG | + | chr7_3:32912949-32912968 | None:intergenic | 35.0% |
| TTTGGATTCAGATTTGTGTG+AGG | - | chr7_3:32913267-32913286 | Msa1101850:intron | 35.0% | |
| TTGGATTCAGATTTGTGTGA+GGG | - | chr7_3:32913268-32913287 | Msa1101850:intron | 35.0% | |
| GACAAATGTACCGAGAAATT+TGG | + | chr7_3:32913316-32913335 | None:intergenic | 35.0% | |
| TCATTAACCATGGAAGAAAG+AGG | - | chr7_3:32913901-32913920 | Msa1101850:intron | 35.0% | |
| CATTAACCATGGAAGAAAGA+GGG | - | chr7_3:32913902-32913921 | Msa1101850:intron | 35.0% | |
| ATTAACCATGGAAGAAAGAG+GGG | - | chr7_3:32913903-32913922 | Msa1101850:intron | 35.0% | |
| ATCATTTAACATATGGGGTC+TGG | - | chr7_3:32913955-32913974 | Msa1101850:intron | 35.0% | |
| ATGACCTAGTTAATTAGGGA+CGG | + | chr7_3:32914470-32914489 | None:intergenic | 35.0% | |
| AAAGTGCAGATTCTATTCTC+AGG | + | chr7_3:32914662-32914681 | None:intergenic | 35.0% | |
| ATCTGTTCCTGTGAAATATG+CGG | + | chr7_3:32915035-32915054 | None:intergenic | 35.0% | |
| AGATTCAGTCTTTGTACGTT+TGG | - | chr7_3:32915455-32915474 | Msa1101850:intron | 35.0% | |
| AGGGCGACATAAAGTTTAAT+TGG | - | chr7_3:32915493-32915512 | Msa1101850:intron | 35.0% | |
| ATTCGAACGGTTGGAAATTT+AGG | - | chr7_3:32915553-32915572 | Msa1101850:intron | 35.0% | |
| ! | ATTAGGGTATTAGGAATACC+TGG | - | chr7_3:32915708-32915727 | Msa1101850:intron | 35.0% |
| ! | GACCATAGCCTCTTTTATAT+TGG | - | chr7_3:32915905-32915924 | Msa1101850:CDS | 35.0% |
| ATGGCCATCCAATATAAAAG+AGG | + | chr7_3:32915916-32915935 | None:intergenic | 35.0% | |
| ! | GATAAAGCAGTTTTCGAAGG+TGG | - | chr7_3:32909685-32909704 | Msa1101850:CDS | 40.0% |
| AGTTACCATGTGTAAACCAG+CGG | - | chr7_3:32910148-32910167 | Msa1101850:intron | 40.0% | |
| GATCATCCATGTGTTTACGT+TGG | + | chr7_3:32910188-32910207 | None:intergenic | 40.0% | |
| CCATTGTAACCCTACATGAA+AGG | + | chr7_3:32910263-32910282 | None:intergenic | 40.0% | |
| CCTTTCATGTAGGGTTACAA+TGG | - | chr7_3:32910260-32910279 | Msa1101850:intron | 40.0% | |
| ! | TTGAATGAATCCATGATGGG+TGG | + | chr7_3:32910355-32910374 | None:intergenic | 40.0% |
| !!! | TAACCCGAGATTTTAAGACC+TGG | - | chr7_3:32910861-32910880 | Msa1101850:intron | 40.0% |
| TGGAATGTAGAGGGTAAAGA+AGG | - | chr7_3:32911149-32911168 | Msa1101850:intron | 40.0% | |
| ! | AGGGTAAAGAAGGTATGTGA+GGG | - | chr7_3:32911159-32911178 | Msa1101850:intron | 40.0% |
| GGAGAGAGAAAAAAGAAGAG+AGG | - | chr7_3:32911481-32911500 | Msa1101850:intron | 40.0% | |
| TGGAATAAGCCAAATGACGA+AGG | - | chr7_3:32911694-32911713 | Msa1101850:intron | 40.0% | |
| ACATCAAAGCCTTCGTCATT+TGG | + | chr7_3:32911706-32911725 | None:intergenic | 40.0% | |
| !! | GACGAAGGCTTTGATGTTTT+TGG | - | chr7_3:32911709-32911728 | Msa1101850:intron | 40.0% |
| !!! | CAGGGACTATTTTGAAGTTG+TGG | + | chr7_3:32911809-32911828 | None:intergenic | 40.0% |
| ! | CAGCTTGGGCTAATGTTTTA+TGG | + | chr7_3:32912122-32912141 | None:intergenic | 40.0% |
| GTTCTTAATCTTAGGGAGCA+AGG | + | chr7_3:32912314-32912333 | None:intergenic | 40.0% | |
| TGGTTGAACTTGAATGAGCA+AGG | + | chr7_3:32912413-32912432 | None:intergenic | 40.0% | |
| TCTTGTCCCTGTGAAATATG+CGG | + | chr7_3:32912833-32912852 | None:intergenic | 40.0% | |
| TCATCAATCATCACTCCGAA+TGG | - | chr7_3:32912853-32912872 | Msa1101850:intron | 40.0% | |
| TCATCAATTGTGTTCTCAGC+AGG | + | chr7_3:32912896-32912915 | None:intergenic | 40.0% | |
| AGATTCAGTCTTGGTACGTT+TGG | - | chr7_3:32913249-32913268 | Msa1101850:intron | 40.0% | |
| AGCATCTATAGTCACAACCA+AGG | + | chr7_3:32913359-32913378 | None:intergenic | 40.0% | |
| TGAAAATCCTTTGGTAGAGG+TGG | - | chr7_3:32913459-32913478 | Msa1101850:intron | 40.0% | |
| CTGAGAACAATCTCCAAACA+TGG | + | chr7_3:32913610-32913629 | None:intergenic | 40.0% | |
| TAAGTGGCTGTCATTAACCA+TGG | - | chr7_3:32913891-32913910 | Msa1101850:intron | 40.0% | |
| TGGAATCTAACTCAAGGGAA+GGG | + | chr7_3:32914030-32914049 | None:intergenic | 40.0% | |
| GAAATGTTAACGAATGCCTC+CGG | - | chr7_3:32914167-32914186 | Msa1101850:intron | 40.0% | |
| AAATGCCGATCTCGATCAAA+TGG | - | chr7_3:32914345-32914364 | Msa1101850:intron | 40.0% | |
| AGTGACCATTTGATCGAGAT+CGG | + | chr7_3:32914353-32914372 | None:intergenic | 40.0% | |
| TGGTTGAACTTGAATGAGCA+AGG | + | chr7_3:32912413-32912432 | None:intergenic | 40.0% | |
| TCATCAATCATCACTCCGAA+TGG | - | chr7_3:32912853-32912872 | Msa1101850:intron | 40.0% | |
| TCATCAATTGTGTTCTCAGC+AGG | + | chr7_3:32912896-32912915 | None:intergenic | 40.0% | |
| ! | TGCCGTTGTTGTTGGAATAT+TGG | + | chr7_3:32915150-32915169 | None:intergenic | 40.0% |
| GACAAACGTGCTGAGAAATT+TGG | + | chr7_3:32915522-32915541 | None:intergenic | 40.0% | |
| TCTGATCTAGCGAATTCGAA+CGG | - | chr7_3:32913334-32913353 | Msa1101850:intron | 40.0% | |
| ATCAACATCAACACGGTTAG+CGG | - | chr7_3:32915788-32915807 | Msa1101850:intron | 40.0% | |
| !! | TGATTTGGTTCTTCCTCAAC+CGG | - | chr7_3:32915815-32915834 | Msa1101850:intron | 40.0% |
| ! | AACTTGAGGCATAAAGGTAC+CGG | + | chr7_3:32915837-32915856 | None:intergenic | 40.0% |
| GAAGAGAACTTGAGGCATAA+AGG | + | chr7_3:32915843-32915862 | None:intergenic | 40.0% | |
| TTCGCCATGTACGGTATATT+GGG | - | chr7_3:32915882-32915901 | Msa1101850:CDS | 40.0% | |
| ACTCGTTTCTCGCTTCCATA+CGG | + | chr7_3:32909900-32909919 | None:intergenic | 45.0% | |
| !! | AACAACCGCTGGTTTACACA+TGG | + | chr7_3:32910156-32910175 | None:intergenic | 45.0% |
| ! | GGATTTTCGTAAACAACCGC+TGG | + | chr7_3:32910167-32910186 | None:intergenic | 45.0% |
| GTAACCCTACATGAAAGGGT+AGG | + | chr7_3:32910258-32910277 | None:intergenic | 45.0% | |
| TTGAATGGTTCCACCCATCA+TGG | - | chr7_3:32910342-32910361 | Msa1101850:intron | 45.0% | |
| ! | GAGGGTAAAGAAGGTATGTG+AGG | - | chr7_3:32911158-32911177 | Msa1101850:intron | 45.0% |
| GGTGAGGTGTGACTGTTAAT+TGG | + | chr7_3:32911269-32911288 | None:intergenic | 45.0% | |
| TCATTGCCACGTCACTAATC+AGG | + | chr7_3:32911290-32911309 | None:intergenic | 45.0% | |
| ! | CTTTTCCCCTCTTTCTTCCA+TGG | + | chr7_3:32913911-32913930 | None:intergenic | 45.0% |
| AAGATTTCGAGGGAAGAGAC+GGG | + | chr7_3:32914002-32914021 | None:intergenic | 45.0% | |
| GAAGATTTCGAGGGAAGAGA+CGG | + | chr7_3:32914003-32914022 | None:intergenic | 45.0% | |
| AAGGGAGAGGAAGATTTCGA+GGG | + | chr7_3:32914012-32914031 | None:intergenic | 45.0% | |
| GTGGAATCTAACTCAAGGGA+AGG | + | chr7_3:32914031-32914050 | None:intergenic | 45.0% | |
| ACGCGTGGAATCTAACTCAA+GGG | + | chr7_3:32914035-32914054 | None:intergenic | 45.0% | |
| CATTGATGTCATGAGTGCAC+GGG | + | chr7_3:32914073-32914092 | None:intergenic | 45.0% | |
| CCATTGATGTCATGAGTGCA+CGG | + | chr7_3:32914074-32914093 | None:intergenic | 45.0% | |
| CATGGTGAAAGGTGATCATG+TGG | + | chr7_3:32914133-32914152 | None:intergenic | 45.0% | |
| !! | AGAGGTCTTAAAGAGTGCTC+CGG | + | chr7_3:32914189-32914208 | None:intergenic | 45.0% |
| !! | AGAATCCTTAAAGAGTGCCC+CGG | - | chr7_3:32914295-32914314 | Msa1101850:intron | 45.0% |
| ! | TTTTGTTAACGAGTGCCTCC+GGG | + | chr7_3:32914316-32914335 | None:intergenic | 45.0% |
| !! | GTTTTGTTAACGAGTGCCTC+CGG | + | chr7_3:32914317-32914336 | None:intergenic | 45.0% |
| !! | CGAGATCGGCATTTTGAGAA+GGG | + | chr7_3:32914339-32914358 | None:intergenic | 45.0% |
| !! | TCGAGATCGGCATTTTGAGA+AGG | + | chr7_3:32914340-32914359 | None:intergenic | 45.0% |
| TTGGAGGGAAAGTGAAGAGA+AGG | + | chr7_3:32914425-32914444 | None:intergenic | 45.0% | |
| CCTAGTTAATTAGGGACGGA+GGG | + | chr7_3:32914466-32914485 | None:intergenic | 45.0% | |
| ACCTAGTTAATTAGGGACGG+AGG | + | chr7_3:32914467-32914486 | None:intergenic | 45.0% | |
| ATCTAGCGAATTCGAACGGT+TGG | - | chr7_3:32915544-32915563 | Msa1101850:intron | 45.0% | |
| ACAACGGCAATAAGGAGAGA+AGG | - | chr7_3:32915750-32915769 | Msa1101850:intron | 45.0% | |
| TGCCTCAAGTTCTCTTCAGA+TGG | - | chr7_3:32915846-32915865 | Msa1101850:intron | 45.0% | |
| GCCTCAAGTTCTCTTCAGAT+GGG | - | chr7_3:32915847-32915866 | Msa1101850:intron | 45.0% | |
| CCTCAAGTTCTCTTCAGATG+GGG | - | chr7_3:32915848-32915867 | Msa1101850:intron | 45.0% | |
| AAGAGAGAGTTCGCCATGTA+CGG | - | chr7_3:32915873-32915892 | Msa1101850:CDS | 45.0% | |
| GTTCGCCATGTACGGTATAT+TGG | - | chr7_3:32915881-32915900 | Msa1101850:CDS | 45.0% | |
| TCGCCATGTACGGTATATTG+GGG | - | chr7_3:32915883-32915902 | Msa1101850:CDS | 45.0% | |
| GGGACCTACCCTTTCATGTA+GGG | - | chr7_3:32910251-32910270 | Msa1101850:intron | 50.0% | |
| ACCTCACCTGATTAGTGACG+TGG | - | chr7_3:32911281-32911300 | Msa1101850:intron | 50.0% | |
| TCTAGCGAATTCGAACGCCT+TGG | - | chr7_3:32913339-32913358 | Msa1101850:intron | 50.0% | |
| TCAGTGTCCACCTCTACCAA+AGG | + | chr7_3:32913469-32913488 | None:intergenic | 50.0% | |
| AGATTTCGAGGGAAGAGACG+GGG | + | chr7_3:32914001-32914020 | None:intergenic | 50.0% | |
| GAAGGGAGAGGAAGATTTCG+AGG | + | chr7_3:32914013-32914032 | None:intergenic | 50.0% | |
| TCTAACTCAAGGGAAGGGAG+AGG | + | chr7_3:32914025-32914044 | None:intergenic | 50.0% | |
| GACGCGTGGAATCTAACTCA+AGG | + | chr7_3:32914036-32914055 | None:intergenic | 50.0% | |
| CCGTGCACTCATGACATCAA+TGG | - | chr7_3:32914071-32914090 | Msa1101850:intron | 50.0% | |
| TTTGTTAACGAGTGCCTCCG+GGG | + | chr7_3:32914315-32914334 | None:intergenic | 50.0% | |
| GAGGGAAAGTGAAGAGAAGG+AGG | + | chr7_3:32914422-32914441 | None:intergenic | 50.0% | |
| CCCTCCGTCCCTAATTAACT+AGG | - | chr7_3:32914463-32914482 | Msa1101850:intron | 50.0% | |
| TCATGTAGCCCTCTCGACAA+CGG | - | chr7_3:32915734-32915753 | Msa1101850:intron | 50.0% | |
| CCTTATTGCCGTTGTCGAGA+GGG | + | chr7_3:32915745-32915764 | None:intergenic | 50.0% | |
| TCCTTATTGCCGTTGTCGAG+AGG | + | chr7_3:32915746-32915765 | None:intergenic | 50.0% | |
| AACATCAACACGGTTAGCGG+CGG | - | chr7_3:32915791-32915810 | Msa1101850:intron | 50.0% | |
| !! | AGGCATAAAGGTACCGGTTG+AGG | + | chr7_3:32915831-32915850 | None:intergenic | 50.0% |
| CCCCATCTGAAGAGAACTTG+AGG | + | chr7_3:32915851-32915870 | None:intergenic | 50.0% | |
| GGTCCCCAATATACCGTACA+TGG | + | chr7_3:32915889-32915908 | None:intergenic | 50.0% | |
| GGGGACCTACCCTTTCATGT+AGG | - | chr7_3:32910250-32910269 | Msa1101850:intron | 55.0% | |
| GCCACGTCACTAATCAGGTG+AGG | + | chr7_3:32911285-32911304 | None:intergenic | 55.0% | |
| ! | AAAGTTGATCGCGTGACGCG+TGG | + | chr7_3:32914050-32914069 | None:intergenic | 55.0% |
| !! | GGTCTTAAAGAGTGCTCCGG+AGG | + | chr7_3:32914186-32914205 | None:intergenic | 55.0% |
| !! | ATCCTTAAAGAGTGCCCCGG+AGG | - | chr7_3:32914298-32914317 | Msa1101850:intron | 55.0% |
| GAGAGGGCTACATGAAAGCC+AGG | + | chr7_3:32915729-32915748 | None:intergenic | 55.0% | |
| CCCTCTCGACAACGGCAATA+AGG | - | chr7_3:32915742-32915761 | Msa1101850:intron | 55.0% | |
| TCGAGGGAAGAGACGGGGAA+AGG | + | chr7_3:32913996-32914015 | None:intergenic | 60.0% | |
| ! | TGCCTCCGGGGCACTCTTTA+AGG | + | chr7_3:32914303-32914322 | None:intergenic | 60.0% |
| ACGGTTAGCGGCGGCTGATT+TGG | - | chr7_3:32915800-32915819 | Msa1101850:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 32909658 | 32915938 | 32909658 | ID=Msa1101850;Name=Msa1101850 |
| chr7_3 | mRNA | 32909658 | 32915938 | 32909658 | ID=Msa1101850-mRNA-1;Parent=Msa1101850;Name=Msa1101850-mRNA-1;_AED=0.62;_eAED=0.62;_QI=0|0|0|0.66|1|1|6|0|276 |
| chr7_3 | exon | 32915864 | 32915938 | 32915864 | ID=Msa1101850-mRNA-1:exon:7152;Parent=Msa1101850-mRNA-1 |
| chr7_3 | exon | 32912664 | 32912751 | 32912664 | ID=Msa1101850-mRNA-1:exon:7151;Parent=Msa1101850-mRNA-1 |
| chr7_3 | exon | 32912070 | 32912318 | 32912070 | ID=Msa1101850-mRNA-1:exon:7150;Parent=Msa1101850-mRNA-1 |
| chr7_3 | exon | 32910463 | 32910549 | 32910463 | ID=Msa1101850-mRNA-1:exon:7149;Parent=Msa1101850-mRNA-1 |
| chr7_3 | exon | 32910022 | 32910112 | 32910022 | ID=Msa1101850-mRNA-1:exon:7148;Parent=Msa1101850-mRNA-1 |
| chr7_3 | exon | 32909658 | 32909898 | 32909658 | ID=Msa1101850-mRNA-1:exon:7147;Parent=Msa1101850-mRNA-1 |
| chr7_3 | CDS | 32915864 | 32915938 | 32915864 | ID=Msa1101850-mRNA-1:cds;Parent=Msa1101850-mRNA-1 |
| chr7_3 | CDS | 32912664 | 32912751 | 32912664 | ID=Msa1101850-mRNA-1:cds;Parent=Msa1101850-mRNA-1 |
| chr7_3 | CDS | 32912070 | 32912318 | 32912070 | ID=Msa1101850-mRNA-1:cds;Parent=Msa1101850-mRNA-1 |
| chr7_3 | CDS | 32910463 | 32910549 | 32910463 | ID=Msa1101850-mRNA-1:cds;Parent=Msa1101850-mRNA-1 |
| chr7_3 | CDS | 32910022 | 32910112 | 32910022 | ID=Msa1101850-mRNA-1:cds;Parent=Msa1101850-mRNA-1 |
| chr7_3 | CDS | 32909658 | 32909898 | 32909658 | ID=Msa1101850-mRNA-1:cds;Parent=Msa1101850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
