Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102850 | XP_003608058.1 | 82.955 | 88 | 13 | 1 | 78 | 163 | 129 | 216 | 7.71e-42 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102850 | G7JNK7 | 82.955 | 88 | 13 | 1 | 78 | 163 | 129 | 216 | 3.68e-42 | 162 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1102850 | Msa1240030 | 0.800396 | 1.470125e-48 | -8.615850e-47 |
| Msa0570840 | Msa1102850 | 0.805603 | 1.232809e-49 | -8.615850e-47 |
| Msa0592090 | Msa1102850 | -0.819836 | 9.420346e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102850 | MtrunA17_Chr4g0045521 | 82.955 | 88 | 13 | 1 | 78 | 163 | 129 | 216 | 7.09e-46 | 162 |
| Msa1102850 | MtrunA17_Chr1g0174651 | 83.333 | 78 | 11 | 1 | 162 | 237 | 8 | 85 | 3.01e-39 | 137 |
| Msa1102850 | MtrunA17_Chr2g0306021 | 77.632 | 76 | 15 | 1 | 164 | 237 | 56 | 131 | 5.00e-36 | 130 |
| Msa1102850 | MtrunA17_Chr7g0227751 | 77.632 | 76 | 15 | 1 | 164 | 237 | 329 | 404 | 3.15e-33 | 130 |
| Msa1102850 | MtrunA17_Chr6g0466851 | 78.947 | 76 | 14 | 1 | 164 | 237 | 697 | 772 | 9.32e-33 | 132 |
| Msa1102850 | MtrunA17_Chr5g0402961 | 52.809 | 89 | 40 | 1 | 77 | 163 | 112 | 200 | 4.83e-23 | 100 |
| Msa1102850 | MtrunA17_Chr5g0402951 | 52.874 | 87 | 39 | 1 | 79 | 163 | 112 | 198 | 6.47e-23 | 100 |
| Msa1102850 | MtrunA17_Chr7g0239401 | 49.206 | 63 | 30 | 1 | 177 | 237 | 15 | 77 | 1.10e-14 | 69.7 |
| Msa1102850 | MtrunA17_Chr2g0318091 | 40.217 | 92 | 52 | 2 | 149 | 237 | 8 | 99 | 3.68e-14 | 68.9 |
| Msa1102850 | MtrunA17_Chr6g0476801 | 39.726 | 73 | 42 | 1 | 183 | 253 | 18 | 90 | 3.25e-13 | 65.9 |
| Msa1102850 | MtrunA17_Chr3g0091111 | 47.368 | 57 | 28 | 1 | 183 | 237 | 18 | 74 | 3.91e-13 | 65.5 |
| Msa1102850 | MtrunA17_Chr3g0094391 | 47.368 | 57 | 28 | 1 | 183 | 237 | 58 | 114 | 4.74e-13 | 66.6 |
| Msa1102850 | MtrunA17_Chr7g0244771 | 60.526 | 38 | 15 | 0 | 183 | 220 | 39 | 76 | 1.20e-12 | 63.5 |
| Msa1102850 | MtrunA17_Chr8g0365151 | 57.143 | 42 | 18 | 0 | 177 | 218 | 12 | 53 | 1.84e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102850 | AT4G37110.3 | 51.685 | 89 | 40 | 2 | 78 | 163 | 34 | 122 | 3.05e-23 | 100 |
| Msa1102850 | AT4G37110.4 | 51.685 | 89 | 40 | 2 | 78 | 163 | 34 | 122 | 3.05e-23 | 100 |
| Msa1102850 | AT4G37110.1 | 51.685 | 89 | 40 | 2 | 78 | 163 | 129 | 217 | 5.03e-23 | 101 |
| Msa1102850 | AT2G23530.1 | 54.217 | 83 | 36 | 1 | 83 | 163 | 116 | 198 | 5.39e-23 | 102 |
| Msa1102850 | AT4G37110.2 | 51.685 | 89 | 40 | 2 | 78 | 163 | 116 | 204 | 6.15e-23 | 100 |
Find 103 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACTTTCCTTCCATCTTTA+AGG | 0.121511 | 7_3:+37182583 | Msa1102850:CDS |
| GTTCTGGCTCTCTTTCCTTT+AGG | 0.253838 | 7_3:-37182749 | None:intergenic |
| CAGAAGAAACTGAAATTATC+AGG | 0.261443 | 7_3:+37182561 | Msa1102850:CDS |
| GCCTTCTTCTTCTTCAGCTT+GGG | 0.269411 | 7_3:-37183034 | None:intergenic |
| GAAGAGCATGAGAAGCTTCT+TGG | 0.277660 | 7_3:+37179436 | Msa1102850:CDS |
| GGGCTCTGTTGGTCTGCTTC+TGG | 0.280112 | 7_3:+37178734 | Msa1102850:CDS |
| TGCTCTTCAGTGTAAACTTC+AGG | 0.282121 | 7_3:-37179421 | None:intergenic |
| TTTGGCAGGTCTGATTTCTT+GGG | 0.300809 | 7_3:+37178677 | Msa1102850:intron |
| TAGTGTCCTCGCCAAGAAAA+TGG | 0.330822 | 7_3:+37181234 | Msa1102850:intron |
| AAGGAAAGGTAAGGCAGATT+TGG | 0.337872 | 7_3:+37182952 | Msa1102850:CDS |
| ACTAATTTAGCTAAGAGTTC+AGG | 0.345975 | 7_3:-37182614 | None:intergenic |
| AGCCTTCTTCTTCTTCAGCT+TGG | 0.346323 | 7_3:-37183035 | None:intergenic |
| ATCTCCACAAAGTTGTCCTT+GGG | 0.357284 | 7_3:-37180595 | None:intergenic |
| TTGGAGATTGTGAGACTGAT+TGG | 0.363050 | 7_3:+37179455 | Msa1102850:CDS |
| CTGGCCCTCTTTCCTTTAGT+AGG | 0.364632 | 7_3:-37182794 | None:intergenic |
| TTCTGACTCAGTACTAGTTC+TGG | 0.378125 | 7_3:-37182813 | None:intergenic |
| TTTAAAACCTTGAGTAGGTT+AGG | 0.382538 | 7_3:-37178937 | None:intergenic |
| GATTGGGAATTGAATGTAGA+TGG | 0.394321 | 7_3:+37179472 | Msa1102850:CDS |
| TTGGTGGCATTTCTCTCCCT+TGG | 0.401022 | 7_3:-37179530 | None:intergenic |
| AGGATTACTTTCCTTAAAGA+TGG | 0.413842 | 7_3:-37182594 | None:intergenic |
| TCTGTTTCTGTCAAGGATAA+AGG | 0.415035 | 7_3:+37182887 | Msa1102850:CDS |
| TGGCATTTCTCTCCCTTGGT+TGG | 0.424787 | 7_3:-37179526 | None:intergenic |
| AAGAAAATGGTATAGATTGC+GGG | 0.427225 | 7_3:+37181247 | Msa1102850:CDS |
| ATAAATTTAACAACATATCA+TGG | 0.435583 | 7_3:+37181120 | Msa1102850:CDS |
| GCTCTTCAGTGTAAACTTCA+GGG | 0.440452 | 7_3:-37179420 | None:intergenic |
| CCTTCAACTTGTGAGTCCTA+TGG | 0.444502 | 7_3:+37183060 | Msa1102850:CDS |
| AGCTTCCTCCAGCTGCTCTT+CGG | 0.446301 | 7_3:-37182981 | None:intergenic |
| ATCAGATTCTGAACTAGTTC+TGG | 0.448130 | 7_3:-37182765 | None:intergenic |
| GAGGAAGCTGCTCTTGCTAA+AGG | 0.453872 | 7_3:+37182674 | Msa1102850:CDS |
| GAGAGAAATGCCACCAATGC+AGG | 0.458561 | 7_3:+37179536 | Msa1102850:CDS |
| GATAATTTCAGTTTCTTCTG+TGG | 0.459916 | 7_3:-37182558 | None:intergenic |
| AGGTGTTGGCAGGGCTCTGT+TGG | 0.462463 | 7_3:+37178723 | Msa1102850:CDS |
| CTTCTATTCCTCAGAAAAGA+AGG | 0.465143 | 7_3:+37182933 | Msa1102850:CDS |
| TATATTACTAAACCTGTACT+TGG | 0.468946 | 7_3:-37181145 | None:intergenic |
| GGAACTTAGCAGGTGTTGGC+AGG | 0.470189 | 7_3:+37178713 | Msa1102850:CDS |
| AATCTCCACAAAGTTGTCCT+TGG | 0.473885 | 7_3:-37180596 | None:intergenic |
| AGGAAGCTGCTCTTGCTAAA+GGG | 0.478652 | 7_3:+37182675 | Msa1102850:CDS |
| AACCATTATACCTGCATTGG+TGG | 0.480761 | 7_3:-37179546 | None:intergenic |
| TGGAGATTGTGAGACTGATT+GGG | 0.490730 | 7_3:+37179456 | Msa1102850:CDS |
| TTGGCAGGTCTGATTTCTTG+GGG | 0.493199 | 7_3:+37178678 | Msa1102850:intron |
| GTGAGTAAGCATGACAGACT+TGG | 0.496134 | 7_3:+37178868 | Msa1102850:CDS |
| TGCTAAAGGGAAAGGGAAGA+AGG | 0.497876 | 7_3:+37182688 | Msa1102850:CDS |
| TTACTTTCCTTAAAGATGGA+AGG | 0.498484 | 7_3:-37182590 | None:intergenic |
| TCTGATGCTGCTCCTACTAA+AGG | 0.498971 | 7_3:+37182782 | Msa1102850:CDS |
| TAAAACCATTATACCTGCAT+TGG | 0.499059 | 7_3:-37179549 | None:intergenic |
| GGTAATCACCGAAGAGCAGC+TGG | 0.501289 | 7_3:+37182973 | Msa1102850:CDS |
| TTACCCCAAGGACAACTTTG+TGG | 0.504429 | 7_3:+37180591 | Msa1102850:CDS |
| TAATTCGCATTTGTTGCAAT+CGG | 0.506211 | 7_3:-37180571 | None:intergenic |
| AGATGACTCCAAGAATGAAA+AGG | 0.507567 | 7_3:+37183086 | Msa1102850:CDS |
| TTCTGACACAGCAACTGCCT+TGG | 0.513583 | 7_3:-37182711 | None:intergenic |
| TACAGGTATTTCGCTCTGCA+AGG | 0.515177 | 7_3:+37181078 | Msa1102850:CDS |
| ACTAAACGAGATTCCAAAGA+TGG | 0.516699 | 7_3:+37181311 | Msa1102850:CDS |
| GCTGTTTCTGATGCACCTAA+AGG | 0.517713 | 7_3:+37182734 | Msa1102850:CDS |
| TGAGTAAGCATGACAGACTT+GGG | 0.521824 | 7_3:+37178869 | Msa1102850:CDS |
| ATTAGTAGCTGAGTACGTCT+TGG | 0.526842 | 7_3:+37182631 | Msa1102850:CDS |
| CATATCATGGGTCCAAGTAC+AGG | 0.531891 | 7_3:+37181133 | Msa1102850:CDS |
| CATAGGACTCACAAGTTGAA+GGG | 0.535256 | 7_3:-37183059 | None:intergenic |
| CTGCTCCTACTAAAGGAAAG+AGG | 0.546365 | 7_3:+37182789 | Msa1102850:CDS |
| TAGATGGATATGATGAGGAT+GGG | 0.547781 | 7_3:+37179488 | Msa1102850:CDS |
| CTTGGAGTCATCTCAACCAT+AGG | 0.550102 | 7_3:-37183076 | None:intergenic |
| CAAGAAAATGGTATAGATTG+CGG | 0.552461 | 7_3:+37181246 | Msa1102850:CDS |
| GTAGATGGATATGATGAGGA+TGG | 0.552923 | 7_3:+37179487 | Msa1102850:CDS |
| GTGAGGAACTTAGCAGGTGT+TGG | 0.554362 | 7_3:+37178709 | Msa1102850:CDS |
| AGCTAAATCTGTTTCTGTCA+AGG | 0.555932 | 7_3:+37182880 | Msa1102850:CDS |
| CCATAGGACTCACAAGTTGA+AGG | 0.557869 | 7_3:-37183060 | None:intergenic |
| TGAAGAAATAGAGAAAGAAG+AGG | 0.561102 | 7_3:+37183006 | Msa1102850:CDS |
| CTGCTCTTGCTAAAGGGAAA+GGG | 0.564781 | 7_3:+37182681 | Msa1102850:CDS |
| ACAGGTATTTCGCTCTGCAA+GGG | 0.569396 | 7_3:+37181079 | Msa1102850:CDS |
| GCTGCTCTTGCTAAAGGGAA+AGG | 0.570460 | 7_3:+37182680 | Msa1102850:CDS |
| TAAATTTAACAACATATCAT+GGG | 0.570631 | 7_3:+37181121 | Msa1102850:CDS |
| GCTTTGCTAGGTAGATGTAA+TGG | 0.571349 | 7_3:+37178822 | Msa1102850:intron |
| CCCTAAAGATGAAAAGTGGT+TGG | 0.573258 | 7_3:+37182529 | Msa1102850:CDS |
| ATTGCGGGTACTTTGTGATG+AGG | 0.574387 | 7_3:+37181262 | Msa1102850:CDS |
| GTGGAGATTGCCTCTGCACA+AGG | 0.575809 | 7_3:+37180610 | Msa1102850:CDS |
| TCAGAAAAGAAGGAAAGGTA+AGG | 0.576029 | 7_3:+37182943 | Msa1102850:CDS |
| TAATCTTCCTAACCTACTCA+AGG | 0.577353 | 7_3:+37178930 | Msa1102850:CDS |
| GTTTGCGTGAGGAACTTAGC+AGG | 0.578312 | 7_3:+37178703 | Msa1102850:CDS |
| AGTAGCTGAGTACGTCTTGG+AGG | 0.580046 | 7_3:+37182634 | Msa1102850:CDS |
| AGATGGATATGATGAGGATG+GGG | 0.583160 | 7_3:+37179489 | Msa1102850:CDS |
| GCCCAAGCTGAAGAAGAAGA+AGG | 0.585869 | 7_3:+37183033 | Msa1102850:CDS |
| TGCTCCTACTAAAGGAAAGA+GGG | 0.589238 | 7_3:+37182790 | Msa1102850:CDS |
| GAACTTAGCAGGTGTTGGCA+GGG | 0.589475 | 7_3:+37178714 | Msa1102850:CDS |
| CAGCCCCTAAAGATGAAAAG+TGG | 0.592920 | 7_3:+37182525 | Msa1102850:CDS |
| GTAGATATTTATATAGCAGA+AGG | 0.594686 | 7_3:+37179391 | Msa1102850:CDS |
| ATTCCTCAGAAAAGAAGGAA+AGG | 0.603333 | 7_3:+37182938 | Msa1102850:CDS |
| AAAGGAAAGATGCAGAAGGT+TGG | 0.604356 | 7_3:+37182905 | Msa1102850:CDS |
| AGAAGAAACTGAAATTATCA+GGG | 0.604538 | 7_3:+37182562 | Msa1102850:CDS |
| GGAAGATGCAAGCTCTCAAG+AGG | 0.607715 | 7_3:+37182655 | Msa1102850:CDS |
| AACAATGTTACCTTGTGCAG+AGG | 0.608718 | 7_3:-37180620 | None:intergenic |
| AGGGAAAGGGAAGAAGGCCA+AGG | 0.610530 | 7_3:+37182694 | Msa1102850:CDS |
| TTCTTGGGGCTGTTTGCGTG+AGG | 0.614889 | 7_3:+37178692 | Msa1102850:CDS |
| GACTCCAAGAATGAAAAGGA+TGG | 0.617486 | 7_3:+37183090 | Msa1102850:CDS |
| CTTATAATTGATCCAACCAA+GGG | 0.624435 | 7_3:+37179514 | Msa1102850:CDS |
| ATAGGACTCACAAGTTGAAG+GGG | 0.642424 | 7_3:-37183058 | None:intergenic |
| GGATAAAGGAAAGATGCAGA+AGG | 0.648967 | 7_3:+37182901 | Msa1102850:CDS |
| TCTTATAATTGATCCAACCA+AGG | 0.650776 | 7_3:+37179513 | Msa1102850:CDS |
| GGAAAGTTGAGTCAACGAGA+TGG | 0.657702 | 7_3:+37178408 | Msa1102850:CDS |
| GAGTAAGCATGACAGACTTG+GGG | 0.673439 | 7_3:+37178870 | Msa1102850:CDS |
| TCTCCACAAAGTTGTCCTTG+GGG | 0.697145 | 7_3:-37180594 | None:intergenic |
| AATCACCGAAGAGCAGCTGG+AGG | 0.697673 | 7_3:+37182976 | Msa1102850:CDS |
| AACAAATGCGAATTACCCCA+AGG | 0.697686 | 7_3:+37180579 | Msa1102850:CDS |
| GAATGTAGATGGATATGATG+AGG | 0.717269 | 7_3:+37179483 | Msa1102850:CDS |
| GATTACATGATCTAGCACAA+TGG | 0.739039 | 7_3:-37178912 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATATATATATATA+TGG | + | chr7_3:37180759-37180778 | Msa1102850:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr7_3:37180760-37180779 | Msa1102850:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr7_3:37180972-37180991 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr7_3:37180760-37180779 | None:intergenic | 0.0% |
| !!! | TTATATACACTAATTTTTTA+AGG | - | chr7_3:37181180-37181199 | None:intergenic | 10.0% |
| !!! | AAAAATATCATATAACTTTT+AGG | - | chr7_3:37181506-37181525 | None:intergenic | 10.0% |
| !!! | TATATGATATTTTTATGATA+AGG | + | chr7_3:37181512-37181531 | Msa1102850:intron | 10.0% |
| !! | CTTTAAATTGATAAAAAAAA+CGG | + | chr7_3:37182065-37182084 | Msa1102850:intron | 10.0% |
| !! | AAGCATATTATATTTAACTA+AGG | + | chr7_3:37179759-37179778 | Msa1102850:intron | 15.0% |
| !! | AGCATATTATATTTAACTAA+GGG | + | chr7_3:37179760-37179779 | Msa1102850:intron | 15.0% |
| !!! | TTTTAAATTGTTTTACCTTT+TGG | + | chr7_3:37180372-37180391 | Msa1102850:intron | 15.0% |
| !!! | AGAAGTTTTAATAAAATCAT+TGG | + | chr7_3:37180514-37180533 | Msa1102850:intron | 15.0% |
| !!! | CAAACATATTCTTTATTTTT+GGG | - | chr7_3:37180693-37180712 | None:intergenic | 15.0% |
| !!! | TCAAACATATTCTTTATTTT+TGG | - | chr7_3:37180694-37180713 | None:intergenic | 15.0% |
| !! | ATAAATTTAACAACATATCA+TGG | + | chr7_3:37181120-37181139 | Msa1102850:CDS | 15.0% |
| !! | TAAATTTAACAACATATCAT+GGG | + | chr7_3:37181121-37181140 | Msa1102850:CDS | 15.0% |
| !!! | AATATAGTGTTATTGTTTAA+TGG | + | chr7_3:37181645-37181664 | Msa1102850:intron | 15.0% |
| !! | GATCTTTATGTTAATATTAT+AGG | + | chr7_3:37181819-37181838 | Msa1102850:intron | 15.0% |
| !!! | TACATACATTTTTTATGATA+TGG | + | chr7_3:37181871-37181890 | Msa1102850:intron | 15.0% |
| !! | TATAAAGTCAGAAATTTAAA+GGG | - | chr7_3:37181956-37181975 | None:intergenic | 15.0% |
| !! | ATATAAAGTCAGAAATTTAA+AGG | - | chr7_3:37181957-37181976 | None:intergenic | 15.0% |
| !!! | TTTGATGACATTAATTTCTA+TGG | + | chr7_3:37179192-37179211 | Msa1102850:intron | 20.0% |
| !!! | TTGATGACATTAATTTCTAT+GGG | + | chr7_3:37179193-37179212 | Msa1102850:intron | 20.0% |
| !!! | TCAAGTTAAGGTATTATTAA+AGG | + | chr7_3:37179337-37179356 | Msa1102850:intron | 20.0% |
| !! | CTAGTATTGTTAAAAAAAGA+AGG | + | chr7_3:37179366-37179385 | Msa1102850:intron | 20.0% |
| !!! | TGACAATTTATTTTGAAACA+AGG | + | chr7_3:37179658-37179677 | Msa1102850:intron | 20.0% |
| !!! | TATATTTTGTAGATTTCTAC+AGG | + | chr7_3:37181061-37181080 | Msa1102850:intron | 20.0% |
| !! | TAAAAATAACATACCATCTT+TGG | - | chr7_3:37181327-37181346 | None:intergenic | 20.0% |
| !! | ATTAAGTTTATTGAGTAACA+TGG | + | chr7_3:37181372-37181391 | Msa1102850:intron | 20.0% |
| !!! | ATGATATTTTTATGATAAGG+TGG | + | chr7_3:37181515-37181534 | Msa1102850:intron | 20.0% |
| !!! | TGATATTTTTATGATAAGGT+GGG | + | chr7_3:37181516-37181535 | Msa1102850:intron | 20.0% |
| !! | TAAAGATCAAAATCTTCTAT+GGG | - | chr7_3:37181807-37181826 | None:intergenic | 20.0% |
| !! | ATAAAGATCAAAATCTTCTA+TGG | - | chr7_3:37181808-37181827 | None:intergenic | 20.0% |
| !!! | AATTTTGGCACATTATAATT+GGG | - | chr7_3:37181923-37181942 | None:intergenic | 20.0% |
| !!! | TAATTTTGGCACATTATAAT+TGG | - | chr7_3:37181924-37181943 | None:intergenic | 20.0% |
| !!! | AAGGGAAAAACATATAATTT+TGG | - | chr7_3:37181938-37181957 | None:intergenic | 20.0% |
| !!! | ATGGTTTTAACGAATGAATT+GGG | + | chr7_3:37178387-37178406 | Msa1102850:CDS | 25.0% |
| ! | GGTTATATGCTAATTTAACT+TGG | + | chr7_3:37178507-37178526 | Msa1102850:intron | 25.0% |
| !!! | TTGTTTTTAAAACCTTGAGT+AGG | - | chr7_3:37178945-37178964 | None:intergenic | 25.0% |
| ! | GCTTCTATTTATAACACTAA+AGG | + | chr7_3:37179026-37179045 | Msa1102850:intron | 25.0% |
| !! | GTTTATTGTTAATGTGGTTT+TGG | - | chr7_3:37179101-37179120 | None:intergenic | 25.0% |
| ! | TTAAGCGTTTATTGTTAATG+TGG | - | chr7_3:37179107-37179126 | None:intergenic | 25.0% |
| ! | TGATGACATTAATTTCTATG+GGG | + | chr7_3:37179194-37179213 | Msa1102850:intron | 25.0% |
| ! | GTATTGTTAAAAAAAGAAGG+AGG | + | chr7_3:37179369-37179388 | Msa1102850:intron | 25.0% |
| ! | GTAGATATTTATATAGCAGA+AGG | + | chr7_3:37179391-37179410 | Msa1102850:CDS | 25.0% |
| ! | AATTACCAGTGTTTAGTTAA+AGG | - | chr7_3:37179977-37179996 | None:intergenic | 25.0% |
| !!! | CATCTTTTTTACTGTATACT+TGG | + | chr7_3:37180006-37180025 | Msa1102850:intron | 25.0% |
| !!! | TATGCAGTGTTTTTAAATGA+AGG | + | chr7_3:37180198-37180217 | Msa1102850:intron | 25.0% |
| ! | ACATAAAAAATACACCATTG+TGG | - | chr7_3:37180302-37180321 | None:intergenic | 25.0% |
| !! | ATAAAACGTTTTGTACCAAA+AGG | - | chr7_3:37180390-37180409 | None:intergenic | 25.0% |
| ! | TCAAAGAAACAAGTAACATA+TGG | - | chr7_3:37180488-37180507 | None:intergenic | 25.0% |
| ! | TATATTACTAAACCTGTACT+TGG | - | chr7_3:37181148-37181167 | None:intergenic | 25.0% |
| ! | TAAGATAAATCCAAGAAGAA+TGG | + | chr7_3:37181463-37181482 | Msa1102850:intron | 25.0% |
| ! | TTCAAAATACTACTGATCAT+GGG | - | chr7_3:37181611-37181630 | None:intergenic | 25.0% |
| ! | ATTCAAAATACTACTGATCA+TGG | - | chr7_3:37181612-37181631 | None:intergenic | 25.0% |
| !! | TATTGTTTAATGGTGTTTTC+TGG | + | chr7_3:37181655-37181674 | Msa1102850:intron | 25.0% |
| !!! | TATAAAGAAAAAAAAGCGCT+AGG | - | chr7_3:37182142-37182161 | None:intergenic | 25.0% |
| !! | AAAGCGTTATCTAAACATAA+TGG | + | chr7_3:37182161-37182180 | Msa1102850:intron | 25.0% |
| ! | AGAAGAAACTGAAATTATCA+GGG | + | chr7_3:37182562-37182581 | Msa1102850:CDS | 25.0% |
| GAGATGGTTATAGACTTATA+GGG | + | chr7_3:37178424-37178443 | Msa1102850:intron | 30.0% | |
| ACATATTCAATTGAATGGCA+AGG | - | chr7_3:37178481-37178500 | None:intergenic | 30.0% | |
| TTGCCATTCAATTGAATATG+TGG | + | chr7_3:37178480-37178499 | Msa1102850:intron | 30.0% | |
| !! | TTTTGGTGATAGCTTTTGAT+TGG | + | chr7_3:37178588-37178607 | Msa1102850:intron | 30.0% |
| ! | TTTAAAACCTTGAGTAGGTT+AGG | - | chr7_3:37178940-37178959 | None:intergenic | 30.0% |
| TTAAGCGTTTATTGTTAGTG+TGG | - | chr7_3:37179070-37179089 | None:intergenic | 30.0% | |
| ACAATAAACGCTTAACTACA+AGG | + | chr7_3:37179075-37179094 | Msa1102850:intron | 30.0% | |
| GAAAGCAAGAACAATAAATC+AGG | - | chr7_3:37179265-37179284 | None:intergenic | 30.0% | |
| GCTTTCTAAATTTGTACTGT+TGG | + | chr7_3:37179279-37179298 | Msa1102850:intron | 30.0% | |
| ! | TGTTGACTAAGATCAAGTTA+AGG | + | chr7_3:37179325-37179344 | Msa1102850:intron | 30.0% |
| TCTTATAATTGATCCAACCA+AGG | + | chr7_3:37179513-37179532 | Msa1102850:CDS | 30.0% | |
| CTTATAATTGATCCAACCAA+GGG | + | chr7_3:37179514-37179533 | Msa1102850:CDS | 30.0% | |
| TAAAACCATTATACCTGCAT+TGG | - | chr7_3:37179552-37179571 | None:intergenic | 30.0% | |
| ! | TTACTAGTTTGTCAGAAGAA+TGG | + | chr7_3:37179729-37179748 | Msa1102850:intron | 30.0% |
| ! | TTGCACCATTGGATTTATTT+TGG | - | chr7_3:37179903-37179922 | None:intergenic | 30.0% |
| TTAGTCAATAAGTTGTAGCT+TGG | + | chr7_3:37180114-37180133 | Msa1102850:intron | 30.0% | |
| TAGCAGCTTAATTTCAAGAT+GGG | - | chr7_3:37180156-37180175 | None:intergenic | 30.0% | |
| ATAGCAGCTTAATTTCAAGA+TGG | - | chr7_3:37180157-37180176 | None:intergenic | 30.0% | |
| TAAAAAATACACCATTGTGG+TGG | - | chr7_3:37180299-37180318 | None:intergenic | 30.0% | |
| ! | TCTTTTACACACAGAATTGT+TGG | + | chr7_3:37180540-37180559 | Msa1102850:intron | 30.0% |
| ! | TAATTCGCATTTGTTGCAAT+CGG | - | chr7_3:37180574-37180593 | None:intergenic | 30.0% |
| !! | ACACCAACTTACTTTTATGA+AGG | + | chr7_3:37180850-37180869 | Msa1102850:intron | 30.0% |
| ACACCTTCATAAAAGTAAGT+TGG | - | chr7_3:37180856-37180875 | None:intergenic | 30.0% | |
| CAAGAAAATGGTATAGATTG+CGG | + | chr7_3:37181246-37181265 | Msa1102850:CDS | 30.0% | |
| AAGAAAATGGTATAGATTGC+GGG | + | chr7_3:37181247-37181266 | Msa1102850:CDS | 30.0% | |
| TGAAATGATACCATTCTTCT+TGG | - | chr7_3:37181476-37181495 | None:intergenic | 30.0% | |
| ! | CTCAATATATTTGCTAGAAG+TGG | + | chr7_3:37181549-37181568 | Msa1102850:intron | 30.0% |
| !! | GTGTTTTCTGGTATATATTC+AGG | + | chr7_3:37181667-37181686 | Msa1102850:intron | 30.0% |
| !! | TTTTCTGGTATATATTCAGG+TGG | + | chr7_3:37181670-37181689 | Msa1102850:intron | 30.0% |
| !!! | GTTTTTTATCCAAAACAAGC+AGG | - | chr7_3:37181747-37181766 | None:intergenic | 30.0% |
| AGCATCACTACTACAAAAAT+GGG | - | chr7_3:37182426-37182445 | None:intergenic | 30.0% | |
| AAGCATCACTACTACAAAAA+TGG | - | chr7_3:37182427-37182446 | None:intergenic | 30.0% | |
| GATAATTTCAGTTTCTTCTG+TGG | - | chr7_3:37182561-37182580 | None:intergenic | 30.0% | |
| CAGAAGAAACTGAAATTATC+AGG | + | chr7_3:37182561-37182580 | Msa1102850:CDS | 30.0% | |
| TTACTTTCCTTAAAGATGGA+AGG | - | chr7_3:37182593-37182612 | None:intergenic | 30.0% | |
| AGGATTACTTTCCTTAAAGA+TGG | - | chr7_3:37182597-37182616 | None:intergenic | 30.0% | |
| ACTAATTTAGCTAAGAGTTC+AGG | - | chr7_3:37182617-37182636 | None:intergenic | 30.0% | |
| TGAAGAAATAGAGAAAGAAG+AGG | + | chr7_3:37183006-37183025 | Msa1102850:CDS | 30.0% | |
| CGAGATGGTTATAGACTTAT+AGG | + | chr7_3:37178423-37178442 | Msa1102850:intron | 35.0% | |
| ATGGTTATAGACTTATAGGG+TGG | + | chr7_3:37178427-37178446 | Msa1102850:intron | 35.0% | |
| CGTCCACATATTCAATTGAA+TGG | - | chr7_3:37178486-37178505 | None:intergenic | 35.0% | |
| TTCAATTGAATATGTGGACG+TGG | + | chr7_3:37178486-37178505 | Msa1102850:intron | 35.0% | |
| !!! | TGGGTCTGTTTGTGTTTTTT+TGG | + | chr7_3:37178571-37178590 | Msa1102850:intron | 35.0% |
| !! | TGATAGCTTTTGATTGGATG+CGG | + | chr7_3:37178594-37178613 | Msa1102850:intron | 35.0% |
| GATTACATGATCTAGCACAA+TGG | - | chr7_3:37178915-37178934 | None:intergenic | 35.0% | |
| TAATCTTCCTAACCTACTCA+AGG | + | chr7_3:37178930-37178949 | Msa1102850:CDS | 35.0% | |
| AACACTAAAGGCAGAATACA+AGG | + | chr7_3:37179038-37179057 | Msa1102850:intron | 35.0% | |
| GTTTATTGTTAGTGTGGCTT+TGG | - | chr7_3:37179064-37179083 | None:intergenic | 35.0% | |
| TGACATTAATTTCTATGGGG+TGG | + | chr7_3:37179197-37179216 | Msa1102850:intron | 35.0% | |
| ATTAATTTCTATGGGGTGGT+TGG | + | chr7_3:37179201-37179220 | Msa1102850:intron | 35.0% | |
| TTTGTACTGTTGGCAGTATT+TGG | + | chr7_3:37179289-37179308 | Msa1102850:intron | 35.0% | |
| GATTGGGAATTGAATGTAGA+TGG | + | chr7_3:37179472-37179491 | Msa1102850:CDS | 35.0% | |
| GAATGTAGATGGATATGATG+AGG | + | chr7_3:37179483-37179502 | Msa1102850:CDS | 35.0% | |
| TAGATGGATATGATGAGGAT+GGG | + | chr7_3:37179488-37179507 | Msa1102850:CDS | 35.0% | |
| ATGTATCACAACCGTTTATC+TGG | + | chr7_3:37179816-37179835 | Msa1102850:intron | 35.0% | |
| ATTATGCCATGCCAGATAAA+CGG | - | chr7_3:37179830-37179849 | None:intergenic | 35.0% | |
| TATGTTTCGCGACATATATC+AGG | + | chr7_3:37179949-37179968 | Msa1102850:intron | 35.0% | |
| ATGTTTCGCGACATATATCA+GGG | + | chr7_3:37179950-37179969 | Msa1102850:intron | 35.0% | |
| TGATCTTCTCTATGAAAGTC+AGG | - | chr7_3:37180078-37180097 | None:intergenic | 35.0% | |
| TAAATGAAGGCCATGACTAA+TGG | + | chr7_3:37180211-37180230 | Msa1102850:intron | 35.0% | |
| ! | ACAGTTTTCCCTTCACAAAT+TGG | - | chr7_3:37180266-37180285 | None:intergenic | 35.0% |
| AGAACCAATGTTGTCAATCA+TGG | - | chr7_3:37180347-37180366 | None:intergenic | 35.0% | |
| CTGCAGTTAATGCATAAAGT+TGG | + | chr7_3:37180449-37180468 | Msa1102850:intron | 35.0% | |
| CTAAAAGACACCTTCACAAA+AGG | - | chr7_3:37180801-37180820 | None:intergenic | 35.0% | |
| AAAGTGAAAATCACACCTTG+AGG | + | chr7_3:37180898-37180917 | Msa1102850:intron | 35.0% | |
| ! | CGCAATCTATACCATTTTCT+TGG | - | chr7_3:37181248-37181267 | None:intergenic | 35.0% |
| ACTAAACGAGATTCCAAAGA+TGG | + | chr7_3:37181311-37181330 | Msa1102850:CDS | 35.0% | |
| AAAAAAAACGGCATCTGCAA+AGG | + | chr7_3:37182077-37182096 | Msa1102850:intron | 35.0% | |
| AAAAAAACGGCATCTGCAAA+GGG | + | chr7_3:37182078-37182097 | Msa1102850:intron | 35.0% | |
| GTCTTTAAACCTGTCTTAGA+TGG | + | chr7_3:37182212-37182231 | Msa1102850:intron | 35.0% | |
| ! | AAAAAAACGCCATCTAAGAC+AGG | - | chr7_3:37182224-37182243 | None:intergenic | 35.0% |
| !!! | TTTTGTGAAAGCGCTATCTA+AGG | + | chr7_3:37182241-37182260 | Msa1102850:intron | 35.0% |
| !!! | TTTTGAAGCGCTACTGTAAA+TGG | - | chr7_3:37182368-37182387 | None:intergenic | 35.0% |
| !! | CAACCACTTTTCATCTTTAG+GGG | - | chr7_3:37182531-37182550 | None:intergenic | 35.0% |
| !! | CCAACCACTTTTCATCTTTA+GGG | - | chr7_3:37182532-37182551 | None:intergenic | 35.0% |
| !! | TCCAACCACTTTTCATCTTT+AGG | - | chr7_3:37182533-37182552 | None:intergenic | 35.0% |
| ATCAGATTCTGAACTAGTTC+TGG | - | chr7_3:37182768-37182787 | None:intergenic | 35.0% | |
| !! | AGCTAAATCTGTTTCTGTCA+AGG | + | chr7_3:37182880-37182899 | Msa1102850:CDS | 35.0% |
| !! | TCTGTTTCTGTCAAGGATAA+AGG | + | chr7_3:37182887-37182906 | Msa1102850:CDS | 35.0% |
| CTTCTATTCCTCAGAAAAGA+AGG | + | chr7_3:37182933-37182952 | Msa1102850:CDS | 35.0% | |
| ATTCCTCAGAAAAGAAGGAA+AGG | + | chr7_3:37182938-37182957 | Msa1102850:CDS | 35.0% | |
| ! | TTACCTTTCCTTCTTTTCTG+AGG | - | chr7_3:37182944-37182963 | None:intergenic | 35.0% |
| TCAGAAAAGAAGGAAAGGTA+AGG | + | chr7_3:37182943-37182962 | Msa1102850:CDS | 35.0% | |
| AGATGACTCCAAGAATGAAA+AGG | + | chr7_3:37183086-37183105 | Msa1102850:CDS | 35.0% | |
| TGAATCCTGTTAGATGATCC+TGG | + | chr7_3:37178531-37178550 | Msa1102850:intron | 40.0% | |
| !!! | TGGCAAGAGTTTTGAGTAGT+AGG | + | chr7_3:37178617-37178636 | Msa1102850:intron | 40.0% |
| !!! | GGCAAGAGTTTTGAGTAGTA+GGG | + | chr7_3:37178618-37178637 | Msa1102850:intron | 40.0% |
| !!! | AAGAGTTTTGAGTAGTAGGG+AGG | + | chr7_3:37178621-37178640 | Msa1102850:intron | 40.0% |
| ! | TTTTGGCAGGTCTGATTTCT+TGG | + | chr7_3:37178676-37178695 | Msa1102850:intron | 40.0% |
| TTTGGCAGGTCTGATTTCTT+GGG | + | chr7_3:37178677-37178696 | Msa1102850:intron | 40.0% | |
| TTTGTGTGTTTCACCTCTGT+TGG | + | chr7_3:37178792-37178811 | Msa1102850:intron | 40.0% | |
| GCTTTGCTAGGTAGATGTAA+TGG | + | chr7_3:37178822-37178841 | Msa1102850:intron | 40.0% | |
| TGAGTAAGCATGACAGACTT+GGG | + | chr7_3:37178869-37178888 | Msa1102850:CDS | 40.0% | |
| GTCTGTACTTGCATAGTTTC+TGG | + | chr7_3:37179139-37179158 | Msa1102850:intron | 40.0% | |
| !!! | GCTGGTTTTTTTGGGTTGAA+TGG | + | chr7_3:37179166-37179185 | Msa1102850:intron | 40.0% |
| GCTCTTCAGTGTAAACTTCA+GGG | - | chr7_3:37179423-37179442 | None:intergenic | 40.0% | |
| TGCTCTTCAGTGTAAACTTC+AGG | - | chr7_3:37179424-37179443 | None:intergenic | 40.0% | |
| TTGGAGATTGTGAGACTGAT+TGG | + | chr7_3:37179455-37179474 | Msa1102850:CDS | 40.0% | |
| TGGAGATTGTGAGACTGATT+GGG | + | chr7_3:37179456-37179475 | Msa1102850:CDS | 40.0% | |
| GTAGATGGATATGATGAGGA+TGG | + | chr7_3:37179487-37179506 | Msa1102850:CDS | 40.0% | |
| AGATGGATATGATGAGGATG+GGG | + | chr7_3:37179489-37179508 | Msa1102850:CDS | 40.0% | |
| AACCATTATACCTGCATTGG+TGG | - | chr7_3:37179549-37179568 | None:intergenic | 40.0% | |
| AGAGCAGAACACAGTGAATT+AGG | - | chr7_3:37179585-37179604 | None:intergenic | 40.0% | |
| ATATAAGCCCTCACCTTTGA+GGG | + | chr7_3:37179612-37179631 | Msa1102850:intron | 40.0% | |
| GAAACTAACAAACCCCTCAA+AGG | - | chr7_3:37179628-37179647 | None:intergenic | 40.0% | |
| !!! | ATTTATTTTGGCCGAGAGCA+TGG | - | chr7_3:37179891-37179910 | None:intergenic | 40.0% |
| CTCGGCCAAAATAAATCCAA+TGG | + | chr7_3:37179895-37179914 | Msa1102850:intron | 40.0% | |
| AGGGTCCTTTAACTAAACAC+TGG | + | chr7_3:37179969-37179988 | Msa1102850:intron | 40.0% | |
| AGTTGTAGCTTGGAATGAGA+CGG | + | chr7_3:37180124-37180143 | Msa1102850:intron | 40.0% | |
| CACCATAGCCAATTTGTGAA+GGG | + | chr7_3:37180255-37180274 | Msa1102850:intron | 40.0% | |
| TTCCCTTCACAAATTGGCTA+TGG | - | chr7_3:37180260-37180279 | None:intergenic | 40.0% | |
| TTGTGAAGGGAAAACTGTCA+TGG | + | chr7_3:37180268-37180287 | Msa1102850:intron | 40.0% | |
| AACAAATGCGAATTACCCCA+AGG | + | chr7_3:37180579-37180598 | Msa1102850:CDS | 40.0% | |
| ATCTCCACAAAGTTGTCCTT+GGG | - | chr7_3:37180598-37180617 | None:intergenic | 40.0% | |
| AATCTCCACAAAGTTGTCCT+TGG | - | chr7_3:37180599-37180618 | None:intergenic | 40.0% | |
| AACAATGTTACCTTGTGCAG+AGG | - | chr7_3:37180623-37180642 | None:intergenic | 40.0% | |
| ! | CTAGAAGACACCTTTTGTGA+AGG | + | chr7_3:37180788-37180807 | Msa1102850:intron | 40.0% |
| ! | TTTTAGCAAGTCACACCTCA+AGG | - | chr7_3:37180916-37180935 | None:intergenic | 40.0% |
| TTGCTAAAAGACACCACCAA+AGG | + | chr7_3:37180927-37180946 | Msa1102850:intron | 40.0% | |
| TGCTAAAAGACACCACCAAA+GGG | + | chr7_3:37180928-37180947 | Msa1102850:intron | 40.0% | |
| ! | TCTATACCATTTTCTTGGCG+AGG | - | chr7_3:37181243-37181262 | None:intergenic | 40.0% |
| TCTGGTATATATTCAGGTGG+AGG | + | chr7_3:37181673-37181692 | Msa1102850:intron | 40.0% | |
| !! | GATGATTTGCCTGCTTGTTT+TGG | + | chr7_3:37181735-37181754 | Msa1102850:intron | 40.0% |
| !! | TGTCAAAAAGCGCTAGCAAA+GGG | - | chr7_3:37182270-37182289 | None:intergenic | 40.0% |
| !! | ATGTCAAAAAGCGCTAGCAA+AGG | - | chr7_3:37182271-37182290 | None:intergenic | 40.0% |
| CCCTAAAGATGAAAAGTGGT+TGG | + | chr7_3:37182529-37182548 | Msa1102850:CDS | 40.0% | |
| GGACTTTCCTTCCATCTTTA+AGG | + | chr7_3:37182583-37182602 | Msa1102850:CDS | 40.0% | |
| ATTAGTAGCTGAGTACGTCT+TGG | + | chr7_3:37182631-37182650 | Msa1102850:CDS | 40.0% | |
| TGCTCCTACTAAAGGAAAGA+GGG | + | chr7_3:37182790-37182809 | Msa1102850:CDS | 40.0% | |
| TTCTGACTCAGTACTAGTTC+TGG | - | chr7_3:37182816-37182835 | None:intergenic | 40.0% | |
| GGATAAAGGAAAGATGCAGA+AGG | + | chr7_3:37182901-37182920 | Msa1102850:CDS | 40.0% | |
| AAAGGAAAGATGCAGAAGGT+TGG | + | chr7_3:37182905-37182924 | Msa1102850:CDS | 40.0% | |
| AAGGAAAGGTAAGGCAGATT+TGG | + | chr7_3:37182952-37182971 | Msa1102850:CDS | 40.0% | |
| ! | ATAGGACTCACAAGTTGAAG+GGG | - | chr7_3:37183061-37183080 | None:intergenic | 40.0% |
| ! | CATAGGACTCACAAGTTGAA+GGG | - | chr7_3:37183062-37183081 | None:intergenic | 40.0% |
| GACTCCAAGAATGAAAAGGA+TGG | + | chr7_3:37183090-37183109 | Msa1102850:CDS | 40.0% | |
| ! | TCTGCCATCCTTTTCATTCT+TGG | - | chr7_3:37183097-37183116 | None:intergenic | 40.0% |
| GGAAAGTTGAGTCAACGAGA+TGG | + | chr7_3:37178408-37178427 | Msa1102850:CDS | 45.0% | |
| TCTAGCCAGGATCATCTAAC+AGG | - | chr7_3:37178539-37178558 | None:intergenic | 45.0% | |
| GTTAGATGATCCTGGCTAGA+TGG | + | chr7_3:37178539-37178558 | Msa1102850:intron | 45.0% | |
| !! | TAGCTTTTGATTGGATGCGG+TGG | + | chr7_3:37178597-37178616 | Msa1102850:intron | 45.0% |
| !! | GTTTTGAGTAGTAGGGAGGA+TGG | + | chr7_3:37178625-37178644 | Msa1102850:intron | 45.0% |
| AGTAGCAGGCACAAAACAGA+TGG | - | chr7_3:37178654-37178673 | None:intergenic | 45.0% | |
| ! | TTTGTGCCTGCTACTGCTTT+TGG | + | chr7_3:37178659-37178678 | Msa1102850:intron | 45.0% |
| TTGGCAGGTCTGATTTCTTG+GGG | + | chr7_3:37178678-37178697 | Msa1102850:intron | 45.0% | |
| CAAAGCAACAACACCAACAG+AGG | - | chr7_3:37178808-37178827 | None:intergenic | 45.0% | |
| !! | GTTGGTGTTGTTGCTTTGCT+AGG | + | chr7_3:37178810-37178829 | Msa1102850:intron | 45.0% |
| GTGAGTAAGCATGACAGACT+TGG | + | chr7_3:37178868-37178887 | Msa1102850:CDS | 45.0% | |
| GAGTAAGCATGACAGACTTG+GGG | + | chr7_3:37178870-37178889 | Msa1102850:CDS | 45.0% | |
| !!! | TCTGGCTGTGCTGGTTTTTT+TGG | + | chr7_3:37179157-37179176 | Msa1102850:intron | 45.0% |
| !!! | CTGGCTGTGCTGGTTTTTTT+GGG | + | chr7_3:37179158-37179177 | Msa1102850:intron | 45.0% |
| ! | GAAGAGCATGAGAAGCTTCT+TGG | + | chr7_3:37179436-37179455 | Msa1102850:CDS | 45.0% |
| TGCCACCAATGCAGGTATAA+TGG | + | chr7_3:37179544-37179563 | Msa1102850:intron | 45.0% | |
| GATATAAGCCCTCACCTTTG+AGG | + | chr7_3:37179611-37179630 | Msa1102850:intron | 45.0% | |
| TATAAGCCCTCACCTTTGAG+GGG | + | chr7_3:37179613-37179632 | Msa1102850:intron | 45.0% | |
| AACAAACCCCTCAAAGGTGA+GGG | - | chr7_3:37179622-37179641 | None:intergenic | 45.0% | |
| TAACAAACCCCTCAAAGGTG+AGG | - | chr7_3:37179623-37179642 | None:intergenic | 45.0% | |
| TCACAACCGTTTATCTGGCA+TGG | + | chr7_3:37179821-37179840 | Msa1102850:intron | 45.0% | |
| CTGGCATGGCATAATTGTGA+TGG | + | chr7_3:37179835-37179854 | Msa1102850:intron | 45.0% | |
| CAATCCAACTACCATGCTCT+CGG | + | chr7_3:37179877-37179896 | Msa1102850:intron | 45.0% | |
| !! | CACGAAGTGTTTTGCACCAT+TGG | - | chr7_3:37179914-37179933 | None:intergenic | 45.0% |
| AACCACCACTCCATTAGTCA+TGG | - | chr7_3:37180224-37180243 | None:intergenic | 45.0% | |
| CCTTCACAAATTGGCTATGG+TGG | - | chr7_3:37180257-37180276 | None:intergenic | 45.0% | |
| CCACCATAGCCAATTTGTGA+AGG | + | chr7_3:37180254-37180273 | Msa1102850:intron | 45.0% | |
| ATGTTGTCAATCATGGCTGG+CGG | - | chr7_3:37180340-37180359 | None:intergenic | 45.0% | |
| CCAATGTTGTCAATCATGGC+TGG | - | chr7_3:37180343-37180362 | None:intergenic | 45.0% | |
| CCAGCCATGATTGACAACAT+TGG | + | chr7_3:37180340-37180359 | Msa1102850:intron | 45.0% | |
| TTACCCCAAGGACAACTTTG+TGG | + | chr7_3:37180591-37180610 | Msa1102850:CDS | 45.0% | |
| TCTCCACAAAGTTGTCCTTG+GGG | - | chr7_3:37180597-37180616 | None:intergenic | 45.0% | |
| TACAGGTATTTCGCTCTGCA+AGG | + | chr7_3:37181078-37181097 | Msa1102850:CDS | 45.0% | |
| ACAGGTATTTCGCTCTGCAA+GGG | + | chr7_3:37181079-37181098 | Msa1102850:CDS | 45.0% | |
| CATATCATGGGTCCAAGTAC+AGG | + | chr7_3:37181133-37181152 | Msa1102850:CDS | 45.0% | |
| TAGTGTCCTCGCCAAGAAAA+TGG | + | chr7_3:37181234-37181253 | Msa1102850:intron | 45.0% | |
| ATTGCGGGTACTTTGTGATG+AGG | + | chr7_3:37181262-37181281 | Msa1102850:CDS | 45.0% | |
| ATTCAGGTGGAGGATTCAAG+TGG | + | chr7_3:37181683-37181702 | Msa1102850:intron | 45.0% | |
| GGAGGAGAGTGAACGAAATT+TGG | + | chr7_3:37181704-37181723 | Msa1102850:intron | 45.0% | |
| ! | GTAAAGCGCTAGCTAAAGCA+TGG | - | chr7_3:37182309-37182328 | None:intergenic | 45.0% |
| CAGCCCCTAAAGATGAAAAG+TGG | + | chr7_3:37182525-37182544 | Msa1102850:CDS | 45.0% | |
| AGGAAGCTGCTCTTGCTAAA+GGG | + | chr7_3:37182675-37182694 | Msa1102850:CDS | 45.0% | |
| CTGCTCTTGCTAAAGGGAAA+GGG | + | chr7_3:37182681-37182700 | Msa1102850:CDS | 45.0% | |
| TGCTAAAGGGAAAGGGAAGA+AGG | + | chr7_3:37182688-37182707 | Msa1102850:CDS | 45.0% | |
| !! | GCTGTTTCTGATGCACCTAA+AGG | + | chr7_3:37182734-37182753 | Msa1102850:CDS | 45.0% |
| !! | GTTCTGGCTCTCTTTCCTTT+AGG | - | chr7_3:37182752-37182771 | None:intergenic | 45.0% |
| TCTGATGCTGCTCCTACTAA+AGG | + | chr7_3:37182782-37182801 | Msa1102850:CDS | 45.0% | |
| CTGCTCCTACTAAAGGAAAG+AGG | + | chr7_3:37182789-37182808 | Msa1102850:CDS | 45.0% | |
| GCCTTCTTCTTCTTCAGCTT+GGG | - | chr7_3:37183037-37183056 | None:intergenic | 45.0% | |
| AGCCTTCTTCTTCTTCAGCT+TGG | - | chr7_3:37183038-37183057 | None:intergenic | 45.0% | |
| ! | CCATAGGACTCACAAGTTGA+AGG | - | chr7_3:37183063-37183082 | None:intergenic | 45.0% |
| CCTTCAACTTGTGAGTCCTA+TGG | + | chr7_3:37183060-37183079 | Msa1102850:CDS | 45.0% | |
| CTTGGAGTCATCTCAACCAT+AGG | - | chr7_3:37183079-37183098 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTAAG+AGG | + | chr7_3:37180047-37180066 | Msa1102850:intron | 5.0% |
| TCCTGGCTAGATGGCTAGAT+AGG | + | chr7_3:37178548-37178567 | Msa1102850:intron | 50.0% | |
| ACCTATCTAGCCATCTAGCC+AGG | - | chr7_3:37178552-37178571 | None:intergenic | 50.0% | |
| TGGCTAGATGGCTAGATAGG+TGG | + | chr7_3:37178551-37178570 | Msa1102850:intron | 50.0% | |
| GGCTAGATGGCTAGATAGGT+GGG | + | chr7_3:37178552-37178571 | Msa1102850:intron | 50.0% | |
| GTTTGCGTGAGGAACTTAGC+AGG | + | chr7_3:37178703-37178722 | Msa1102850:CDS | 50.0% | |
| GTGAGGAACTTAGCAGGTGT+TGG | + | chr7_3:37178709-37178728 | Msa1102850:CDS | 50.0% | |
| !! | GAACTTAGCAGGTGTTGGCA+GGG | + | chr7_3:37178714-37178733 | Msa1102850:CDS | 50.0% |
| !! | TGCATAGTTTCTGGCTGTGC+TGG | + | chr7_3:37179148-37179167 | Msa1102850:intron | 50.0% |
| TGGCATTTCTCTCCCTTGGT+TGG | - | chr7_3:37179529-37179548 | None:intergenic | 50.0% | |
| ! | TTGGTGGCATTTCTCTCCCT+TGG | - | chr7_3:37179533-37179552 | None:intergenic | 50.0% |
| GAGAGAAATGCCACCAATGC+AGG | + | chr7_3:37179536-37179555 | Msa1102850:CDS | 50.0% | |
| GAAGGCCATGACTAATGGAG+TGG | + | chr7_3:37180216-37180235 | Msa1102850:intron | 50.0% | |
| AAGACACCACCAAAGGGTAG+TGG | + | chr7_3:37180934-37180953 | Msa1102850:intron | 50.0% | |
| TACAAGCCACTACCCTTTGG+TGG | - | chr7_3:37180943-37180962 | None:intergenic | 50.0% | |
| TGCTACAAGCCACTACCCTT+TGG | - | chr7_3:37180946-37180965 | None:intergenic | 50.0% | |
| AGTAGCTGAGTACGTCTTGG+AGG | + | chr7_3:37182634-37182653 | Msa1102850:CDS | 50.0% | |
| GGAAGATGCAAGCTCTCAAG+AGG | + | chr7_3:37182655-37182674 | Msa1102850:CDS | 50.0% | |
| GAGGAAGCTGCTCTTGCTAA+AGG | + | chr7_3:37182674-37182693 | Msa1102850:CDS | 50.0% | |
| GCTGCTCTTGCTAAAGGGAA+AGG | + | chr7_3:37182680-37182699 | Msa1102850:CDS | 50.0% | |
| TTCTGACACAGCAACTGCCT+TGG | - | chr7_3:37182714-37182733 | None:intergenic | 50.0% | |
| CTGGCCCTCTTTCCTTTAGT+AGG | - | chr7_3:37182797-37182816 | None:intergenic | 50.0% | |
| GCCCAAGCTGAAGAAGAAGA+AGG | + | chr7_3:37183033-37183052 | Msa1102850:CDS | 50.0% | |
| !! | TGCCTGCTACTGCTTTTGGC+AGG | + | chr7_3:37178663-37178682 | Msa1102850:intron | 55.0% |
| GACCTGCCAAAAGCAGTAGC+AGG | - | chr7_3:37178668-37178687 | None:intergenic | 55.0% | |
| TTCTTGGGGCTGTTTGCGTG+AGG | + | chr7_3:37178692-37178711 | Msa1102850:CDS | 55.0% | |
| !! | GGAACTTAGCAGGTGTTGGC+AGG | + | chr7_3:37178713-37178732 | Msa1102850:CDS | 55.0% |
| ! | CTGTTGGTCTGCTTCTGGTG+TGG | + | chr7_3:37178739-37178758 | Msa1102850:intron | 55.0% |
| ! | TTGGCCGAGAGCATGGTAGT+TGG | - | chr7_3:37179884-37179903 | None:intergenic | 55.0% |
| GGCCATGACTAATGGAGTGG+TGG | + | chr7_3:37180219-37180238 | Msa1102850:intron | 55.0% | |
| GTGGAGATTGCCTCTGCACA+AGG | + | chr7_3:37180610-37180629 | Msa1102850:CDS | 55.0% | |
| CAGGTGGAGGATTCAAGTGG+AGG | + | chr7_3:37181686-37181705 | Msa1102850:intron | 55.0% | |
| AGCGCTACTGTAAATGGCGC+TGG | - | chr7_3:37182362-37182381 | None:intergenic | 55.0% | |
| AGGGAAAGGGAAGAAGGCCA+AGG | + | chr7_3:37182694-37182713 | Msa1102850:CDS | 55.0% | |
| GGTAATCACCGAAGAGCAGC+TGG | + | chr7_3:37182973-37182992 | Msa1102850:CDS | 55.0% | |
| AATCACCGAAGAGCAGCTGG+AGG | + | chr7_3:37182976-37182995 | Msa1102850:CDS | 55.0% | |
| AGCTTCCTCCAGCTGCTCTT+CGG | - | chr7_3:37182984-37183003 | None:intergenic | 55.0% | |
| !! | AGGTGTTGGCAGGGCTCTGT+TGG | + | chr7_3:37178723-37178742 | Msa1102850:CDS | 60.0% |
| ! | GGGCTCTGTTGGTCTGCTTC+TGG | + | chr7_3:37178734-37178753 | Msa1102850:CDS | 60.0% |
| TCATGGCAGCGCCACCACAA+TGG | + | chr7_3:37180285-37180304 | Msa1102850:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 37178387 | 37183150 | 37178387 | ID=Msa1102850;Name=Msa1102850 |
| chr7_3 | mRNA | 37178387 | 37183150 | 37178387 | ID=Msa1102850-mRNA-1;Parent=Msa1102850;Name=Msa1102850-mRNA-1;_AED=0.69;_eAED=0.69;_QI=0|0.12|0|0.55|1|1|9|0|464 |
| chr7_3 | exon | 37178387 | 37178429 | 37178387 | ID=Msa1102850-mRNA-1:exon:7660;Parent=Msa1102850-mRNA-1 |
| chr7_3 | exon | 37178685 | 37178755 | 37178685 | ID=Msa1102850-mRNA-1:exon:7661;Parent=Msa1102850-mRNA-1 |
| chr7_3 | exon | 37178832 | 37178951 | 37178832 | ID=Msa1102850-mRNA-1:exon:7662;Parent=Msa1102850-mRNA-1 |
| chr7_3 | exon | 37179385 | 37179557 | 37179385 | ID=Msa1102850-mRNA-1:exon:7663;Parent=Msa1102850-mRNA-1 |
| chr7_3 | exon | 37180554 | 37180631 | 37180554 | ID=Msa1102850-mRNA-1:exon:7664;Parent=Msa1102850-mRNA-1 |
| chr7_3 | exon | 37181073 | 37181154 | 37181073 | ID=Msa1102850-mRNA-1:exon:7665;Parent=Msa1102850-mRNA-1 |
| chr7_3 | exon | 37181237 | 37181332 | 37181237 | ID=Msa1102850-mRNA-1:exon:7666;Parent=Msa1102850-mRNA-1 |
| chr7_3 | exon | 37181420 | 37181436 | 37181420 | ID=Msa1102850-mRNA-1:exon:7667;Parent=Msa1102850-mRNA-1 |
| chr7_3 | exon | 37182436 | 37183150 | 37182436 | ID=Msa1102850-mRNA-1:exon:7668;Parent=Msa1102850-mRNA-1 |
| chr7_3 | CDS | 37178387 | 37178429 | 37178387 | ID=Msa1102850-mRNA-1:cds;Parent=Msa1102850-mRNA-1 |
| chr7_3 | CDS | 37178685 | 37178755 | 37178685 | ID=Msa1102850-mRNA-1:cds;Parent=Msa1102850-mRNA-1 |
| chr7_3 | CDS | 37178832 | 37178951 | 37178832 | ID=Msa1102850-mRNA-1:cds;Parent=Msa1102850-mRNA-1 |
| chr7_3 | CDS | 37179385 | 37179557 | 37179385 | ID=Msa1102850-mRNA-1:cds;Parent=Msa1102850-mRNA-1 |
| chr7_3 | CDS | 37180554 | 37180631 | 37180554 | ID=Msa1102850-mRNA-1:cds;Parent=Msa1102850-mRNA-1 |
| chr7_3 | CDS | 37181073 | 37181154 | 37181073 | ID=Msa1102850-mRNA-1:cds;Parent=Msa1102850-mRNA-1 |
| chr7_3 | CDS | 37181237 | 37181332 | 37181237 | ID=Msa1102850-mRNA-1:cds;Parent=Msa1102850-mRNA-1 |
| chr7_3 | CDS | 37181420 | 37181436 | 37181420 | ID=Msa1102850-mRNA-1:cds;Parent=Msa1102850-mRNA-1 |
| chr7_3 | CDS | 37182436 | 37183150 | 37182436 | ID=Msa1102850-mRNA-1:cds;Parent=Msa1102850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
