AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0570840


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0570840 MtrunA17_Chr8g0385681 88.177 203 8 1 1 187 53 255 1.87e-127 358
Msa0570840 MtrunA17_Chr8g0385691 84.158 202 16 1 1 186 50 251 2.35e-121 343
Msa0570840 MtrunA17_Chr3g0131581 65.842 202 53 1 1 186 70 271 3.95e-97 282
Msa0570840 MtrunA17_Chr1g0161441 38.835 206 104 4 3 187 34 238 5.08e-43 144
Msa0570840 MtrunA17_Chr1g0155071 29.798 198 116 5 1 178 46 240 3.38e-21 88.2
Msa0570840 MtrunA17_Chr4g0058811 29.730 148 102 2 4 150 77 223 9.42e-21 86.7
Msa0570840 MtrunA17_Chr4g0058791 28.276 145 102 2 4 147 75 218 7.45e-20 84.0
Msa0570840 MtrunA17_Chr3g0115591 28.061 196 119 5 1 177 52 244 1.03e-16 76.3
Msa0570840 MtrunA17_Chr1g0205531 28.378 148 104 2 1 147 42 188 1.48e-14 70.9
Msa0570840 MtrunA17_Chr5g0425421 28.378 148 102 3 1 147 49 193 2.31e-14 70.1
Msa0570840 MtrunA17_Chr8g0373391 28.000 200 123 5 1 181 46 243 2.05e-13 67.0
Msa0570840 MtrunA17_Chr7g0254621 26.667 195 121 5 3 178 49 240 3.42e-13 66.6
Msa0570840 MtrunA17_Chr3g0131071 27.805 205 118 6 3 177 252 456 4.65e-11 60.8
Msa0570840 MtrunA17_Chr3g0144911 29.858 211 113 7 1 177 111 320 5.78e-11 60.5
Msa0570840 MtrunA17_Chr4g0014901 30.435 207 109 8 3 177 274 477 9.04e-11 60.1
Msa0570840 MtrunA17_Chr2g0293201 28.780 205 114 9 3 177 147 349 9.73e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0570840 AT1G01630.1 59.406 202 66 1 1 186 53 254 3.23e-85 252
Msa0570840 AT1G14820.2 38.835 206 104 4 3 187 20 224 2.12e-37 129
Msa0570840 AT1G14820.1 38.835 206 104 4 3 187 20 224 2.12e-37 129
Msa0570840 AT1G14820.3 38.835 206 104 4 3 187 33 237 2.45e-37 129
Msa0570840 AT5G63060.2 32.432 148 98 2 4 150 43 189 4.16e-20 84.3
Msa0570840 AT1G75170.2 28.788 198 118 5 1 178 47 241 6.78e-20 85.1
Msa0570840 AT1G75170.1 28.788 198 118 5 1 178 47 241 6.78e-20 85.1
Msa0570840 AT5G63060.1 32.432 148 98 2 4 150 78 224 9.89e-20 84.3
Msa0570840 AT4G36640.1 28.856 201 120 5 1 181 44 241 3.00e-18 80.5
Msa0570840 AT4G36640.3 28.856 201 120 5 1 181 44 241 3.00e-18 80.5
Msa0570840 AT4G08690.2 26.804 194 120 4 3 177 48 238 5.40e-18 80.1
Msa0570840 AT4G08690.1 26.804 194 120 4 3 177 48 238 5.40e-18 80.1
Msa0570840 AT4G08690.3 26.804 194 120 4 3 177 48 238 5.40e-18 80.1
Msa0570840 AT1G22180.2 30.303 198 110 8 3 178 51 242 1.05e-14 71.2
Msa0570840 AT1G22180.4 30.303 198 110 8 3 178 51 242 1.05e-14 71.2
Msa0570840 AT3G22410.1 30.872 149 99 4 1 147 34 180 1.21e-13 68.6
Msa0570840 AT1G05370.1 28.966 145 102 1 3 147 47 190 2.66e-13 67.8
Msa0570840 AT4G36640.2 26.087 184 113 5 18 181 1 181 1.07e-11 62.0
Msa0570840 AT1G75170.3 26.531 147 87 3 54 181 17 161 4.24e-11 60.1
Msa0570840 AT4G09160.2 27.805 205 116 7 3 177 319 521 8.85e-11 60.5
Msa0570840 AT4G09160.1 27.805 205 116 7 3 177 344 546 9.01e-11 60.5

Find 75 sgRNAs with CRISPR-Local

Find 758 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACTTCCCCAATCTTTC+AGG 0.132673 4_1:+73213367 None:intergenic
CTCATAATTTATGTTATATA+TGG 0.218621 4_1:-73210728 Msa0570840:three_prime_UTR
AACTATATATACCTGCAAAA+TGG 0.312721 4_1:+73213497 None:intergenic
GACCAATCTTGTCGCGTCCT+TGG 0.313425 4_1:+73213889 None:intergenic
TTATAGTCTCATTAATTTCC+CGG 0.334057 4_1:+73210811 None:intergenic
CGGCCGTGACACCGTGATTT+GGG 0.344203 4_1:+73222329 None:intergenic
AGGCCTTGTCGTCTGCAATT+TGG 0.345554 4_1:+73213916 None:intergenic
TCGGCCGTGACACCGTGATT+TGG 0.350819 4_1:+73222328 None:intergenic
AATTACCTTTCCATTTGAAT+TGG 0.355040 4_1:+73222230 None:intergenic
GGGTAGAAGGTTATGAGATT+TGG 0.368711 4_1:+73222349 None:intergenic
ACCAATCTTGTCGCGTCCTT+GGG 0.377029 4_1:+73213890 None:intergenic
GGATTACTACCCTGAAAGAT+TGG 0.396743 4_1:-73213377 Msa0570840:CDS
ATTAGTTTAATTAGATATCC+TGG 0.398913 4_1:+73210839 None:intergenic
AAGAAGAATTCCATGGTTAC+TGG 0.399039 4_1:+73210669 None:intergenic
AGACATTCATTTGTTTCAAA+TGG 0.402002 4_1:-73213966 Msa0570840:CDS
AGTATTTGTGGAGAACAATA+AGG 0.402414 4_1:-73210941 Msa0570840:CDS
GGAATTCTTCTTTGCAATCT+CGG 0.425699 4_1:-73210658 Msa0570840:three_prime_UTR
GATTACTACCCTGAAAGATT+GGG 0.426754 4_1:-73213376 Msa0570840:CDS
TGTTACTCAAGTACTTGAAA+TGG 0.431463 4_1:-73213989 Msa0570840:CDS
AGTCAACTCCCTGAGATATA+CGG 0.435275 4_1:-73210886 Msa0570840:CDS
ATCCTTGCAGATAGTATTTG+TGG 0.435946 4_1:-73210953 Msa0570840:intron
GACACCGTGATTTGGGTAGA+AGG 0.445021 4_1:+73222336 None:intergenic
AGTTTGCCACCGTATATCTC+AGG 0.454754 4_1:+73210877 None:intergenic
CCAGGACAAGAGAAATTTGT+TGG 0.459213 4_1:-73213585 Msa0570840:CDS
CCACCGAAGGCAATGAGTAT+AGG 0.460670 4_1:+73213864 None:intergenic
ATGAACCTGTGATAGAGATA+TGG 0.468267 4_1:+73213941 None:intergenic
GCCCAAGGACGCGACAAGAT+TGG 0.471686 4_1:-73213891 Msa0570840:CDS
CCAACAAATTTCTCTTGTCC+TGG 0.481649 4_1:+73213585 None:intergenic
GAAGGGAGTGCCGGAGTAAG+TGG 0.486876 4_1:+73222275 None:intergenic
ACAACTTCCCCAATCTTTCA+GGG 0.493166 4_1:+73213368 None:intergenic
CCGGAGTAAGTGGTCGGTGC+CGG 0.506675 4_1:+73222285 None:intergenic
TTTAATTAGATATCCTGGAT+GGG 0.507649 4_1:+73210844 None:intergenic
CAGATCTGAATGAGAGAGAA+GGG 0.507851 4_1:+73222258 None:intergenic
AAAAGAAAATAGTCAAAGAA+AGG 0.508788 4_1:+73210752 None:intergenic
CGACCTATACTCATTGCCTT+CGG 0.509268 4_1:-73213867 Msa0570840:CDS
GACGACAAGGCCTTCGCCCA+AGG 0.521166 4_1:-73213906 Msa0570840:CDS
GTTTAATTAGATATCCTGGA+TGG 0.523947 4_1:+73210843 None:intergenic
AAACATTATCAAAAGAAAGA+TGG 0.532424 4_1:-73213840 Msa0570840:CDS
CTTGTCGCGTCCTTGGGCGA+AGG 0.534331 4_1:+73213896 None:intergenic
AATGAGAGAGAAGGGAGTGC+CGG 0.536023 4_1:+73222266 None:intergenic
AGAAGGTTATGAGATTTGGT+AGG 0.539474 4_1:+73222353 None:intergenic
TGTTGGTATAGCAGAACTCA+AGG 0.548158 4_1:-73213568 Msa0570840:CDS
ACAGATCTGAATGAGAGAGA+AGG 0.553174 4_1:+73222257 None:intergenic
TATAGCAGAACTCAAGGGAT+GGG 0.554676 4_1:-73213562 Msa0570840:CDS
AGTGATGTTCGTGGATACAT+TGG 0.558957 4_1:-73213528 Msa0570840:CDS
ACTGCAATTAGTCCCCATCC+AGG 0.559870 4_1:-73210857 Msa0570840:CDS
TTAATTAGATATCCTGGATG+GGG 0.560226 4_1:+73210845 None:intergenic
TGGTTCCATATCTCTATCAC+AGG 0.560409 4_1:-73213946 Msa0570840:CDS
AGTCGGAAATCAGTGAGAAT+CGG 0.561627 4_1:+73222309 None:intergenic
AGTTGTATTTCCAGTAACCA+TGG 0.562231 4_1:-73210679 Msa0570840:three_prime_UTR
CCTATACTCATTGCCTTCGG+TGG 0.567691 4_1:-73213864 Msa0570840:CDS
AAGTGGTCGGTGCCGGCAGT+CGG 0.570531 4_1:+73222292 None:intergenic
TACTCAAATAGTGATGTTCG+TGG 0.571932 4_1:-73213537 Msa0570840:CDS
CTAATTAAACTAATCAACAC+CGG 0.572195 4_1:-73210830 Msa0570840:exon
GATTGCAAAGAAGAATTCCA+TGG 0.576206 4_1:+73210662 None:intergenic
TCGTGATTTAGATGTGGAGA+AGG 0.580581 4_1:-73214021 Msa0570840:CDS
ACAAATTTCTCTTGTCCTGG+TGG 0.587062 4_1:+73213588 None:intergenic
TGATGTATCAGCATGCCACC+AGG 0.599653 4_1:-73213603 Msa0570840:intron
TCTCACTGATTTCCGACTGC+CGG 0.609683 4_1:-73222304 Msa0570840:five_prime_UTR
CTACCCAAATCACGGTGTCA+CGG 0.613411 4_1:-73222332 Msa0570840:five_prime_UTR
TAGCCAAATTGCAGACGACA+AGG 0.617317 4_1:-73213919 Msa0570840:CDS
GTATAGCAGAACTCAAGGGA+TGG 0.617434 4_1:-73213563 Msa0570840:CDS
ATATACCTGCAAAATGGAGA+GGG 0.622606 4_1:+73213503 None:intergenic
TTCTTGATAAACTATGTGCA+AGG 0.626670 4_1:-73213711 Msa0570840:intron
CCGGCACCGACCACTTACTC+CGG 0.629493 4_1:-73222285 Msa0570840:five_prime_UTR
ATAGCAGAACTCAAGGGATG+GGG 0.630684 4_1:-73213561 Msa0570840:CDS
ATTACTACCCTGAAAGATTG+GGG 0.630792 4_1:-73213375 Msa0570840:CDS
GTTTGCCACCGTATATCTCA+GGG 0.637203 4_1:+73210878 None:intergenic
ACGAGCTCGTGATTTAGATG+TGG 0.640280 4_1:-73214027 Msa0570840:CDS
TATATACCTGCAAAATGGAG+AGG 0.641453 4_1:+73213502 None:intergenic
GTTGGTATAGCAGAACTCAA+GGG 0.644604 4_1:-73213567 Msa0570840:CDS
TAATTAAACTAATCAACACC+GGG 0.646365 4_1:-73210829 Msa0570840:three_prime_UTR
ATAACCTTCTACCCAAATCA+CGG 0.647067 4_1:-73222340 Msa0570840:five_prime_UTR
GGAGTGCCGGAGTAAGTGGT+CGG 0.651920 4_1:+73222279 None:intergenic
CAACTCCCTGAGATATACGG+TGG 0.738091 4_1:-73210883 Msa0570840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTTTTATATTTTTTA+TGG + chr4_1:73213876-73213895 None:intergenic 0.0%
!! TTAATATAAATAATTTAAAT+AGG + chr4_1:73220556-73220575 None:intergenic 0.0%
!!! AATATAATAAATATTTTATT+AGG - chr4_1:73220883-73220902 Msa0570840:intron 0.0%
!!! TTTAATTTAAATAATTAATT+AGG - chr4_1:73221363-73221382 Msa0570840:intron 0.0%
!!! TATAAGAGTATTTTTTTTTT+TGG - chr4_1:73211677-73211696 Msa0570840:intron 10.0%
!! TTTACAATAAACAAAAATTA+GGG + chr4_1:73211987-73212006 None:intergenic 10.0%
!!! TTTTACAATAAACAAAAATT+AGG + chr4_1:73211988-73212007 None:intergenic 10.0%
!!! GAATACTATTAAATTTTATT+TGG + chr4_1:73213473-73213492 None:intergenic 10.0%
!! CTAGAATTAATTTAAAAATA+GGG + chr4_1:73213744-73213763 None:intergenic 10.0%
!! ACTAGAATTAATTTAAAAAT+AGG + chr4_1:73213745-73213764 None:intergenic 10.0%
!!! AATTTGATATTATTTTTTAC+CGG + chr4_1:73214194-73214213 None:intergenic 10.0%
!! AAATATTTATCTATAAACTT+AGG + chr4_1:73214735-73214754 None:intergenic 10.0%
!!! TATTTTGAAACAAATTTTTT+TGG + chr4_1:73215016-73215035 None:intergenic 10.0%
!! ATAACATCATATTAATATTA+GGG - chr4_1:73215364-73215383 Msa0570840:intron 10.0%
!! AAGAAAAAAAACATATAAAT+CGG + chr4_1:73216951-73216970 None:intergenic 10.0%
!!! ATCTTTTTTCATTTAATTTT+TGG + chr4_1:73217970-73217989 None:intergenic 10.0%
!!! TGAACTTTTTTTAAATAAAA+AGG + chr4_1:73218546-73218565 None:intergenic 10.0%
!!! GATGTTTTAAATTAAATTAT+AGG - chr4_1:73219791-73219810 Msa0570840:intron 10.0%
!!! AAATTCAGATTTTTAAAATA+GGG + chr4_1:73220465-73220484 None:intergenic 10.0%
!!! AAAATTCAGATTTTTAAAAT+AGG + chr4_1:73220466-73220485 None:intergenic 10.0%
!! ATATAAATAATTTAAATAGG+TGG + chr4_1:73220553-73220572 None:intergenic 10.0%
!! ATTATATAAATATGTATATG+CGG + chr4_1:73220866-73220885 None:intergenic 10.0%
!!! TTTTTTTCATGTATTTTTAA+TGG - chr4_1:73221067-73221086 Msa0570840:intron 10.0%
!!! TTTTTTCATGTATTTTTAAT+GGG - chr4_1:73221068-73221087 Msa0570840:intron 10.0%
!! AATTTAAATAATTAATTAGG+TGG - chr4_1:73221366-73221385 Msa0570840:intron 10.0%
!!! AGCTATATATATTTTTATTG+CGG + chr4_1:73211227-73211246 None:intergenic 15.0%
!! ATGTATCAGTAAATTAAATT+AGG - chr4_1:73211310-73211329 Msa0570840:intron 15.0%
!! TTTATAATTTACATTGCATA+TGG - chr4_1:73211338-73211357 Msa0570840:intron 15.0%
!!! TTATGGAATTATTTTACTTA+TGG - chr4_1:73211371-73211390 Msa0570840:intron 15.0%
!! GTTATAACAATTTAATCAAT+AGG - chr4_1:73211860-73211879 Msa0570840:intron 15.0%
!! TTAATAACATAGATCAATAT+CGG - chr4_1:73212152-73212171 Msa0570840:intron 15.0%
!!! AGAACATTTTACAATTAAAA+AGG - chr4_1:73212530-73212549 Msa0570840:intron 15.0%
!!! ATTTTACAATTAAAAAGGAA+CGG - chr4_1:73212535-73212554 Msa0570840:intron 15.0%
!!! CTTAAAAAAATTATTTGCTA+TGG + chr4_1:73212671-73212690 None:intergenic 15.0%
!! TAAAGCCTATTTAATTAAAT+AGG - chr4_1:73212858-73212877 Msa0570840:intron 15.0%
!! TTATACATAAAAAGCTTAAT+AGG + chr4_1:73212929-73212948 None:intergenic 15.0%
!! TAAATAATGAAATCTTATGA+AGG + chr4_1:73213049-73213068 None:intergenic 15.0%
!! AGTGAGTTTAAAAAAAAAAT+AGG - chr4_1:73213610-73213629 Msa0570840:intron 15.0%
!! GTGAGTTTAAAAAAAAAATA+GGG - chr4_1:73213611-73213630 Msa0570840:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr4_1:73213713-73213732 None:intergenic 15.0%
!!! AAAAAGAAGAAATACTTTTT+TGG + chr4_1:73214135-73214154 None:intergenic 15.0%
!!! TTTTGTTCAAATTAATAATG+AGG - chr4_1:73214519-73214538 Msa0570840:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr4_1:73215119-73215138 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr4_1:73215143-73215162 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr4_1:73215142-73215161 Msa0570840:intron 15.0%
!! GATAACATCATATTAATATT+AGG - chr4_1:73215363-73215382 Msa0570840:intron 15.0%
!!! ATTTTTGAAGGAAAAAAATA+GGG - chr4_1:73216283-73216302 Msa0570840:intron 15.0%
!!! AAATATTGAATACGATTTTT+CGG + chr4_1:73216365-73216384 None:intergenic 15.0%
!! ATGAAAGATAATATCAAATT+AGG - chr4_1:73216466-73216485 Msa0570840:intron 15.0%
!!! AGTCTGATTATTTTTTTTAA+AGG - chr4_1:73216662-73216681 Msa0570840:intron 15.0%
!!! TGATTATTTTTTTTAAAGGA+AGG - chr4_1:73216692-73216711 Msa0570840:intron 15.0%
!! TTAATTAGGAGTTATATATA+CGG - chr4_1:73216905-73216924 Msa0570840:intron 15.0%
!! GTTAGATCAAATATATAAAT+CGG + chr4_1:73216983-73217002 None:intergenic 15.0%
!! TCAAATTATATAAATACCAA+CGG - chr4_1:73217043-73217062 Msa0570840:intron 15.0%
!! TGAATAAATAACAAAGTTTA+TGG - chr4_1:73217121-73217140 Msa0570840:intron 15.0%
!! AATATTAATTGACTAAGTTA+AGG + chr4_1:73217178-73217197 None:intergenic 15.0%
!! ATTATAAATGTCATCAATAT+AGG + chr4_1:73218135-73218154 None:intergenic 15.0%
!! AGTGCTATATTAATATATAA+AGG + chr4_1:73219625-73219644 None:intergenic 15.0%
!! TTGAAATGAAAAAAAGATAA+AGG + chr4_1:73220053-73220072 None:intergenic 15.0%
!! CTTAAAAAATCATATGTAAA+TGG + chr4_1:73219904-73219923 None:intergenic 15.0%
!!! TTCATGATTTTATTTTCTTA+TGG - chr4_1:73219931-73219950 Msa0570840:intron 15.0%
!!! ATCTTTTTTTCATTTCAATT+TGG + chr4_1:73219868-73219887 None:intergenic 15.0%
!! TTGAAATGAAAAAAAGATAA+AGG - chr4_1:73220053-73220072 Msa0570840:intron 15.0%
!!! TAATTTTGCCTAAATTATAT+GGG - chr4_1:73220117-73220136 Msa0570840:intron 15.0%
!!! TTTTAATAATAGTACCTAAT+AGG - chr4_1:73220228-73220247 Msa0570840:intron 15.0%
!!! AAATTCAGAGTTTTAAAATA+GGG + chr4_1:73220406-73220425 None:intergenic 15.0%
!!! AAAATTCAGAGTTTTAAAAT+AGG + chr4_1:73220407-73220426 None:intergenic 15.0%
!!! AATTCAGATTTTTAAAATAG+GGG + chr4_1:73220464-73220483 None:intergenic 15.0%
!! TTATATAAATATGTATATGC+GGG + chr4_1:73220865-73220884 None:intergenic 15.0%
!! TTATTAGGTGTATTAATATT+AGG - chr4_1:73220898-73220917 Msa0570840:intron 15.0%
!! TGAAAATAAAGATAAAATGT+AGG + chr4_1:73221168-73221187 None:intergenic 15.0%
!!! AGAATTTTTTCTTCATTTTA+AGG - chr4_1:73221198-73221217 Msa0570840:intron 15.0%
!! AGAAAATAAAGATAAAATGT+AGG + chr4_1:73221273-73221292 None:intergenic 15.0%
!!! AAAATTCTGAGTTTTAAAAT+AGG - chr4_1:73221495-73221514 Msa0570840:intron 15.0%
!!! AAATTCTGAGTTTTAAAATA+GGG - chr4_1:73221496-73221515 Msa0570840:intron 15.0%
!!! TAAGCAAAAAATACTTTTTT+AGG + chr4_1:73221842-73221861 None:intergenic 15.0%
!! ATGAGATGTTATATATAATT+TGG + chr4_1:73222010-73222029 None:intergenic 15.0%
!! CTCATAATTTATGTTATATA+TGG - chr4_1:73222326-73222345 Msa0570840:five_prime_UTR 15.0%
!!! TACTTACAAAGAATATTTTC+TGG - chr4_1:73211033-73211052 Msa0570840:intron 20.0%
!! TGAATAATTTCAAATTATGC+AGG + chr4_1:73211088-73211107 None:intergenic 20.0%
!!! GAATGAAATTTGAAACTTAT+AGG - chr4_1:73211117-73211136 Msa0570840:intron 20.0%
!!! CACTTAATCATTTTTATAAG+AGG - chr4_1:73211442-73211461 Msa0570840:intron 20.0%
!!! TGAGAGACTTTTTTTTTTAA+AGG - chr4_1:73212189-73212208 Msa0570840:intron 20.0%
!! TCTAAAAGTGACAATTAAAA+AGG + chr4_1:73212301-73212320 None:intergenic 20.0%
!! GACAAATTCTTATTAGTATT+TGG + chr4_1:73212649-73212668 None:intergenic 20.0%
!! TTATTTAGTAGCACATATAT+TGG - chr4_1:73213013-73213032 Msa0570840:intron 20.0%
!! ATGTAAACCTATTACTAAAT+AGG + chr4_1:73213115-73213134 None:intergenic 20.0%
!!! TAAATTTTATTTGGTCATTG+TGG + chr4_1:73213464-73213483 None:intergenic 20.0%
!!! AAAATAGTTGATAGAATTTG+TGG + chr4_1:73213557-73213576 None:intergenic 20.0%
!!! GAAAAGTTGGTATATTTATA+GGG + chr4_1:73213654-73213673 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr4_1:73213714-73213733 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr4_1:73213717-73213736 Msa0570840:CDS 20.0%
!!! AAATTCTAAATTTTTTTGGG+AGG - chr4_1:73213918-73213937 Msa0570840:CDS 20.0%
!!! AAAAAGTTGGTATGTTTATA+GGG - chr4_1:73214091-73214110 Msa0570840:intron 20.0%
!!! AGTCTATCATAAATTTTATC+CGG - chr4_1:73214172-73214191 Msa0570840:intron 20.0%
!! CAAATTAATCATCATATTGA+AGG - chr4_1:73214240-73214259 Msa0570840:intron 20.0%
!!! TTTTGAAAACGACAAATAAA+AGG + chr4_1:73214378-73214397 None:intergenic 20.0%
!! ACCCAAAAAATAAAATAATG+AGG - chr4_1:73214549-73214568 Msa0570840:intron 20.0%
!!! GCCTCATTATTTTATTTTTT+GGG + chr4_1:73214553-73214572 None:intergenic 20.0%
!!! TGCCTCATTATTTTATTTTT+TGG + chr4_1:73214554-73214573 None:intergenic 20.0%
!!! TATCTTATTTTCATCAAACT+CGG + chr4_1:73214902-73214921 None:intergenic 20.0%
!!! TTTTTAATTGATAGAACATC+TGG + chr4_1:73214929-73214948 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr4_1:73215056-73215075 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr4_1:73215133-73215152 Msa0570840:intron 20.0%
!! TAATATGATGTTATCTATCA+CGG + chr4_1:73215358-73215377 None:intergenic 20.0%
!!! TTTTTATATCAGAACTTCTT+CGG - chr4_1:73215394-73215413 Msa0570840:intron 20.0%
!!! TTTGACAGATTTTTCTTTAT+CGG + chr4_1:73215473-73215492 None:intergenic 20.0%
!! TAATACCTTTATAGTTGTAT+TGG - chr4_1:73215495-73215514 Msa0570840:intron 20.0%
!! AATACCTTTATAGTTGTATT+GGG - chr4_1:73215496-73215515 Msa0570840:intron 20.0%
!!! GGGCATTTTTAAAAAAAATA+GGG + chr4_1:73215601-73215620 None:intergenic 20.0%
!!! AGGGCATTTTTAAAAAAAAT+AGG + chr4_1:73215602-73215621 None:intergenic 20.0%
!!! ACTCTATTTTTTAAAGTTTC+CGG + chr4_1:73215745-73215764 None:intergenic 20.0%
!!! AAATTCATATCTTTTGTATC+CGG + chr4_1:73215903-73215922 None:intergenic 20.0%
!!! TTATCAATAACTTGTGTTAT+AGG + chr4_1:73216021-73216040 None:intergenic 20.0%
!!! TTTTCAAAAAACATAAATGC+TGG - chr4_1:73216204-73216223 Msa0570840:intron 20.0%
!!! CATTTTTGAAGGAAAAAAAT+AGG - chr4_1:73216282-73216301 Msa0570840:intron 20.0%
!!! TATACGGTTTTGTATTTTTT+TGG - chr4_1:73216921-73216940 Msa0570840:intron 20.0%
!!! ATACGGTTTTGTATTTTTTT+GGG - chr4_1:73216922-73216941 Msa0570840:intron 20.0%
!!! CTTAATATTCAACTTCTTTT+AGG + chr4_1:73217239-73217258 None:intergenic 20.0%
!! AAAAGAAGTTGAATATTAAG+TGG - chr4_1:73217239-73217258 Msa0570840:intron 20.0%
!! AAGGCAATTATCAATATATA+TGG - chr4_1:73217404-73217423 Msa0570840:intron 20.0%
!! TACAAACAAATTATACTATC+AGG + chr4_1:73217523-73217542 None:intergenic 20.0%
!!! TGTCTTTTTTCTTATTCATT+TGG - chr4_1:73217651-73217670 Msa0570840:intron 20.0%
!! TTGAGAATCATAAAATCATA+GGG - chr4_1:73217699-73217718 Msa0570840:intron 20.0%
!!! AAAAAAAAAGTGTATTGATG+AGG - chr4_1:73217781-73217800 Msa0570840:intron 20.0%
!! TCAATATAGGTTAAAATAGT+TGG + chr4_1:73218122-73218141 None:intergenic 20.0%
!!! CTTTTTACATATCAGATTAT+CGG + chr4_1:73218199-73218218 None:intergenic 20.0%
!! ATAATCTGATATGTAAAAAG+TGG - chr4_1:73218199-73218218 Msa0570840:intron 20.0%
!!! TTTTTCATACCTCTAAAAAA+AGG - chr4_1:73218594-73218613 Msa0570840:intron 20.0%
!!! TGAAAAATACCTTTTTTTAG+AGG + chr4_1:73218606-73218625 None:intergenic 20.0%
!! AAACATTATCAAAAGAAAGA+TGG - chr4_1:73219214-73219233 Msa0570840:intron 20.0%
!!! TAATTCCTTATTTCAATCTA+TGG - chr4_1:73219370-73219389 Msa0570840:intron 20.0%
!!! AATTTCACAGTTTTATAAAC+TGG + chr4_1:73219398-73219417 None:intergenic 20.0%
!! AGTTTATAAAACTGTGAAAT+TGG - chr4_1:73219397-73219416 Msa0570840:intron 20.0%
!! TATATATTAATATAGCACTC+AGG - chr4_1:73219626-73219645 Msa0570840:intron 20.0%
!!! TAATCCCTTAACTTTATTTT+AGG - chr4_1:73219828-73219847 Msa0570840:intron 20.0%
!! GTTACCTAAAATAAAGTTAA+GGG + chr4_1:73219835-73219854 None:intergenic 20.0%
!! TGTTACCTAAAATAAAGTTA+AGG + chr4_1:73219836-73219855 None:intergenic 20.0%
!! CTTGAAAATGTATATGAAAA+TGG - chr4_1:73220015-73220034 Msa0570840:intron 20.0%
!!! GTAATTTTGCCTAAATTATA+TGG - chr4_1:73220116-73220135 Msa0570840:intron 20.0%
!!! AATTCAGAGTTTTAAAATAG+GGG + chr4_1:73220405-73220424 None:intergenic 20.0%
!! ATTCCGAAAAACATTAAATT+GGG + chr4_1:73221467-73221486 None:intergenic 20.0%
!! AATTCCGAAAAACATTAAAT+TGG + chr4_1:73221466-73221485 None:intergenic 20.0%
!!! TTTAATGTTTTTCGGAATTT+TGG - chr4_1:73220436-73220455 Msa0570840:intron 20.0%
!!! ATTCAGATTTTTAAAATAGG+GGG + chr4_1:73220463-73220482 None:intergenic 20.0%
!! TGAAAAATATTAAATTGGAG+GGG + chr4_1:73220490-73220509 None:intergenic 20.0%
!! CTGAAAAATATTAAATTGGA+GGG + chr4_1:73220491-73220510 None:intergenic 20.0%
!! ACTCCTGAAAAATATTAAAT+TGG + chr4_1:73220495-73220514 None:intergenic 20.0%
!!! ATTTAATATTTTTCAGGAGT+TGG - chr4_1:73220495-73220514 Msa0570840:intron 20.0%
!!! CTCTTTTAAGTATGTTTTTT+TGG - chr4_1:73220953-73220972 Msa0570840:intron 20.0%
!! ATGATCATTCAAATATTTAC+AGG - chr4_1:73221035-73221054 Msa0570840:intron 20.0%
!!! GTTTTTCCATGTATTTTTAA+TGG - chr4_1:73221113-73221132 Msa0570840:intron 20.0%
!! AAAGTTCCATTAAAAATACA+TGG + chr4_1:73221122-73221141 None:intergenic 20.0%
!!! AGAATTTTTTCTGCATTTTA+AGG - chr4_1:73221303-73221322 Msa0570840:intron 20.0%
!! AATTCCGAAAAACATTAAAT+TGG - chr4_1:73221466-73221485 Msa0570840:intron 20.0%
!! ATTCCGAAAAACATTAAATT+GGG - chr4_1:73221467-73221486 Msa0570840:intron 20.0%
!!! AATTCTGAGTTTTAAAATAG+GGG - chr4_1:73221497-73221516 Msa0570840:intron 20.0%
!!! CTTTTAAGAAAAAGTAATGT+GGG - chr4_1:73221581-73221600 Msa0570840:intron 20.0%
!!! TTTTAAGAAAAAGTAATGTG+GGG - chr4_1:73221582-73221601 Msa0570840:intron 20.0%
!!! TAAGCAAAAAACACTTTTTT+AGG - chr4_1:73221753-73221772 Msa0570840:intron 20.0%
!! GAGAATAATTAATTCATATG+AGG - chr4_1:73221905-73221924 Msa0570840:intron 20.0%
!! ATATATAACATCTCATTGTA+TGG - chr4_1:73222014-73222033 Msa0570840:intron 20.0%
!!! TGTTTAAGTTTGATATATTG+AGG - chr4_1:73222051-73222070 Msa0570840:intron 20.0%
!!! GTTTAAGTTTGATATATTGA+GGG - chr4_1:73222052-73222071 Msa0570840:intron 20.0%
!!! ATTAGTTTAATTAGATATCC+TGG + chr4_1:73222218-73222237 None:intergenic 20.0%
!! AAAAGAAAATAGTCAAAGAA+AGG + chr4_1:73222305-73222324 None:intergenic 20.0%
!!! ATCTGTTTTTCCAATTCAAA+TGG - chr4_1:73210814-73210833 Msa0570840:three_prime_UTR 25.0%
!! TTTTTCCAATTCAAATGGAA+AGG - chr4_1:73210819-73210838 Msa0570840:three_prime_UTR 25.0%
! AATTACCTTTCCATTTGAAT+TGG + chr4_1:73210827-73210846 None:intergenic 25.0%
!!! CAAGCAACATATTTTTTTGT+TGG + chr4_1:73211161-73211180 None:intergenic 25.0%
! TTACATTGCATATGGAATTA+TGG - chr4_1:73211346-73211365 Msa0570840:intron 25.0%
!!! CGACTTATTTTAATTTTCGA+AGG - chr4_1:73211585-73211604 Msa0570840:intron 25.0%
! GAAGAAGAAAAAAAGTTCAA+CGG - chr4_1:73211736-73211755 Msa0570840:intron 25.0%
!!! TTTTTTGTAACTAAAGCATG+TGG + chr4_1:73211779-73211798 None:intergenic 25.0%
! CTTTAGACTTCTGAATTTAT+TGG - chr4_1:73212027-73212046 Msa0570840:intron 25.0%
! AAGTGACAATTAAAAAGGAA+CGG + chr4_1:73212296-73212315 None:intergenic 25.0%
! TATTTAACTGTCTCTTTCAA+AGG - chr4_1:73212336-73212355 Msa0570840:intron 25.0%
!! GTAACATTTATTGATTGTCT+TGG - chr4_1:73212492-73212511 Msa0570840:intron 25.0%
!!! GTCTCGTATATTTTTTTTAG+AGG + chr4_1:73212584-73212603 None:intergenic 25.0%
! CTAAATAACCATTCATATGA+AGG + chr4_1:73213001-73213020 None:intergenic 25.0%
!!! ATTTTGGCCTATTTAGTAAT+AGG - chr4_1:73213105-73213124 Msa0570840:intron 25.0%
!! TGTAAACTAGGCTTTTAAAT+AGG - chr4_1:73213152-73213171 Msa0570840:intron 25.0%
!! GTGATTATTGACTATAATCA+AGG - chr4_1:73213531-73213550 Msa0570840:CDS 25.0%
!!! CGAAAAGTTGGTATATTTAT+AGG + chr4_1:73213655-73213674 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr4_1:73213685-73213704 None:intergenic 25.0%
!! AAATTTTCCATCTTCACTTT+TGG + chr4_1:73214027-73214046 None:intergenic 25.0%
!! TGAAGATGGAAAATTTTTGA+GGG - chr4_1:73214031-73214050 Msa0570840:CDS 25.0%
! AAGTTGAAGGAAAAATTTAG+AGG - chr4_1:73214059-73214078 Msa0570840:intron 25.0%
! AGTTGAAGGAAAAATTTAGA+GGG - chr4_1:73214060-73214079 Msa0570840:intron 25.0%
!!! CAAAAAGTTGGTATGTTTAT+AGG - chr4_1:73214090-73214109 Msa0570840:intron 25.0%
! TAATTGCTCACCATTTAATA+CGG - chr4_1:73214213-73214232 Msa0570840:intron 25.0%
!! AATTTGTTCACCGTATTAAA+TGG + chr4_1:73214226-73214245 None:intergenic 25.0%
! TTCTCAAAACTAGAGTTTAT+AGG + chr4_1:73214824-73214843 None:intergenic 25.0%
!! CGGTTTCTAAGAAAAATAAT+TGG - chr4_1:73215414-73215433 Msa0570840:intron 25.0%
! ATAAAATTCGAAAACGTCAA+GGG + chr4_1:73215621-73215640 None:intergenic 25.0%
! TATAAAATTCGAAAACGTCA+AGG + chr4_1:73215622-73215641 None:intergenic 25.0%
!! CGTTTTCGAATTTTATAATC+TGG - chr4_1:73215625-73215644 Msa0570840:intron 25.0%
!! TTTTTCCAGATTTTGTAATC+CGG - chr4_1:73215692-73215711 Msa0570840:intron 25.0%
!!! TTTTTTCGGATTTTGTAATC+CGG - chr4_1:73215723-73215742 Msa0570840:intron 25.0%
! TTTGCAATGATAGATATGAT+AGG - chr4_1:73215921-73215940 Msa0570840:intron 25.0%
!! TAATTCTAAAAACGATAACC+AGG - chr4_1:73216076-73216095 Msa0570840:intron 25.0%
!! TGGTGTTTTCAAATTTCATT+TGG + chr4_1:73216230-73216249 None:intergenic 25.0%
! AAGTAATACTCTATGATCTA+TGG - chr4_1:73216332-73216351 Msa0570840:intron 25.0%
! ACTAACATTTGATATCCTTA+AGG + chr4_1:73216645-73216664 None:intergenic 25.0%
!!! TCGACAGAACATTTTTAATT+AGG - chr4_1:73216891-73216910 Msa0570840:intron 25.0%
! GGTAAATGATTGAAAAAGTA+CGG - chr4_1:73217018-73217037 Msa0570840:intron 25.0%
!!! ATTTTCATTTTTCATTCCGT+TGG + chr4_1:73217062-73217081 None:intergenic 25.0%
! GAATGAAAAATGAAAATGCA+GGG - chr4_1:73217065-73217084 Msa0570840:intron 25.0%
! ATGATTCTCAACAATATCAT+CGG + chr4_1:73217690-73217709 None:intergenic 25.0%
! GTTGAGAATCATAAAATCAT+AGG - chr4_1:73217698-73217717 Msa0570840:intron 25.0%
!! ATAACATATGTGTATTGATG+AGG - chr4_1:73217750-73217769 Msa0570840:intron 25.0%
! ATATTGCATATTATATGCAG+AGG - chr4_1:73217893-73217912 Msa0570840:intron 25.0%
! TTAGTAGTTAAAGTCATAGA+GGG + chr4_1:73218027-73218046 None:intergenic 25.0%
!! AAGTTATCTGAAGTTAATCA+AGG + chr4_1:73218099-73218118 None:intergenic 25.0%
!!! AAAAGGTATTTTTCAGTGAT+TGG - chr4_1:73218611-73218630 Msa0570840:intron 25.0%
! GCTACGTTAAACATATTTAT+TGG + chr4_1:73218682-73218701 None:intergenic 25.0%
! ATGTTTAACGTAGCATTTAA+TGG - chr4_1:73218688-73218707 Msa0570840:intron 25.0%
! CTCACAAATTAAATTTCACA+TGG + chr4_1:73218874-73218893 None:intergenic 25.0%
! ATTTAAGCATAACTTCTACT+TGG + chr4_1:73218925-73218944 None:intergenic 25.0%
! GAAGTTATGCTTAAATTTGT+TGG - chr4_1:73218929-73218948 Msa0570840:intron 25.0%
!! AAGAGGATATATTTTACTCT+TGG - chr4_1:73218966-73218985 Msa0570840:intron 25.0%
! AGACATTCATTTGTTTCAAA+TGG - chr4_1:73219088-73219107 Msa0570840:intron 25.0%
!! TTAACAATTTTCTGTGATAC+AGG - chr4_1:73219306-73219325 Msa0570840:intron 25.0%
! AACTATATATACCTGCAAAA+TGG + chr4_1:73219560-73219579 None:intergenic 25.0%
! CACACTTTCATAAAAATGTA+CGG + chr4_1:73219726-73219745 None:intergenic 25.0%
!!! TTAGTTTTGTTGTCAATGAA+CGG + chr4_1:73219762-73219781 None:intergenic 25.0%
! TGACAACAAAACTAAAAAGA+AGG - chr4_1:73219767-73219786 Msa0570840:intron 25.0%
! TCATATGTAAATGGATCAAA+AGG + chr4_1:73219895-73219914 None:intergenic 25.0%
! GTATATGAAAATGGACAAAA+AGG - chr4_1:73220024-73220043 Msa0570840:intron 25.0%
! TGTTACCTGAAATTAAGTTA+AGG - chr4_1:73220083-73220102 Msa0570840:intron 25.0%
! GTTACCTGAAATTAAGTTAA+GGG - chr4_1:73220084-73220103 Msa0570840:intron 25.0%
! AAAAAATGATGTGTTCATGT+GGG + chr4_1:73220202-73220221 None:intergenic 25.0%
! TAAAAAATGATGTGTTCATG+TGG + chr4_1:73220203-73220222 None:intergenic 25.0%
! CTCTAACAAAATGTCTAAAA+TGG - chr4_1:73220267-73220286 Msa0570840:intron 25.0%
!!! ATTCAGAGTTTTAAAATAGG+GGG + chr4_1:73220404-73220423 None:intergenic 25.0%
! TTCCGAAAAACATTAAATTG+GGG + chr4_1:73221468-73221487 None:intergenic 25.0%
!!! TTCAGATTTTTAAAATAGGG+GGG + chr4_1:73220462-73220481 None:intergenic 25.0%
! CCTGAAAAATATTAAATTGG+AGG + chr4_1:73220492-73220511 None:intergenic 25.0%
!! CCTCCAATTTAATATTTTTC+AGG - chr4_1:73220489-73220508 Msa0570840:intron 25.0%
!! TGGGTAATTTGAAATTTAGA+TGG - chr4_1:73220797-73220816 Msa0570840:intron 25.0%
!! GGGTAATTTGAAATTTAGAT+GGG - chr4_1:73220798-73220817 Msa0570840:intron 25.0%
!!! GTTTTTTTGGTTAAGTTGTT+AGG - chr4_1:73220966-73220985 Msa0570840:intron 25.0%
!!! AACTTTTAGCCTTGTATTTT+GGG - chr4_1:73220998-73221017 Msa0570840:intron 25.0%
! TAGTTATATCCCAAAATACA+AGG + chr4_1:73221010-73221029 None:intergenic 25.0%
! ACATGGAAAAACAGTATAAA+CGG + chr4_1:73221105-73221124 None:intergenic 25.0%
!!! GAACTTTTTTTCGTTTATTC+TGG - chr4_1:73221135-73221154 Msa0570840:intron 25.0%
! TTCCGAAAAACATTAAATTG+GGG - chr4_1:73221468-73221487 Msa0570840:intron 25.0%
!!! ATTCTGAGTTTTAAAATAGG+GGG - chr4_1:73221498-73221517 Msa0570840:intron 25.0%
! AATTCTGATTCAGTCAAAAT+AGG - chr4_1:73221536-73221555 Msa0570840:intron 25.0%
! ATTCTGATTCAGTCAAAATA+GGG - chr4_1:73221537-73221556 Msa0570840:intron 25.0%
!!! CCACATTACTTTTTCTTAAA+AGG + chr4_1:73221583-73221602 None:intergenic 25.0%
!!! CCTTTTAAGAAAAAGTAATG+TGG - chr4_1:73221580-73221599 Msa0570840:intron 25.0%
!!! TCAATGTGGGAAATTTTTTT+GGG + chr4_1:73221638-73221657 None:intergenic 25.0%
! AAAAAAATTTCCCACATTGA+GGG - chr4_1:73221638-73221657 Msa0570840:intron 25.0%
!! TTTTTGCTTATAATTGTGAC+CGG + chr4_1:73221743-73221762 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr4_1:73221852-73221871 Msa0570840:intron 25.0%
! TTTAATTAGATATCCTGGAT+GGG + chr4_1:73222213-73222232 None:intergenic 25.0%
! CTAATTAAACTAATCAACAC+CGG - chr4_1:73222224-73222243 Msa0570840:intron 25.0%
! TAATTAAACTAATCAACACC+GGG - chr4_1:73222225-73222244 Msa0570840:intron 25.0%
! TTATAGTCTCATTAATTTCC+CGG + chr4_1:73222246-73222265 None:intergenic 25.0%
TTGTTGGTACAGCTATAATA+CGG + chr4_1:73211145-73211164 None:intergenic 30.0%
CATATGGAATTATGGACTTA+TGG - chr4_1:73211354-73211373 Msa0570840:intron 30.0%
GTTATCACTTCTTCAATTCT+GGG + chr4_1:73211531-73211550 None:intergenic 30.0%
AGTTATCACTTCTTCAATTC+TGG + chr4_1:73211532-73211551 None:intergenic 30.0%
!!! CTTTTTTTCTTCTTCATCAG+TGG + chr4_1:73211731-73211750 None:intergenic 30.0%
CTAAAGCAATATATACTGTG+AGG + chr4_1:73212013-73212032 None:intergenic 30.0%
AGTCGAATTCTTCTAACATT+TGG + chr4_1:73212064-73212083 None:intergenic 30.0%
AAATGTTAGAAGAATTCGAC+TGG - chr4_1:73212063-73212082 Msa0570840:intron 30.0%
AAAAGTCTCTCATATCCAAA+TGG + chr4_1:73212181-73212200 None:intergenic 30.0%
TTACCCTTAGATATTTACTG+CGG - chr4_1:73212391-73212410 Msa0570840:intron 30.0%
TTACAATTAAAAAGGAACGG+AGG - chr4_1:73212538-73212557 Msa0570840:intron 30.0%
!! ATTATATGAGACGAGTTGAT+AGG - chr4_1:73212731-73212750 Msa0570840:intron 30.0%
!! TTATATGAGACGAGTTGATA+GGG - chr4_1:73212732-73212751 Msa0570840:intron 30.0%
CCTGGCCTATTTAATTAAAT+AGG + chr4_1:73212866-73212885 None:intergenic 30.0%
CCTATTTAATTAAATAGGCC+AGG - chr4_1:73212863-73212882 Msa0570840:intron 30.0%
ACATAAAAAGCTTAATAGGC+CGG + chr4_1:73212925-73212944 None:intergenic 30.0%
AACTTCAACGATGTCAATAA+TGG + chr4_1:73212960-73212979 None:intergenic 30.0%
CAGAAATATTCATGTGCTTT+AGG - chr4_1:73213073-73213092 Msa0570840:intron 30.0%
AAATAGGCCAAAATTTACGA+AGG + chr4_1:73213099-73213118 None:intergenic 30.0%
!!! AGGCCTATAATTTTTGAAGT+AGG - chr4_1:73213254-73213273 Msa0570840:intron 30.0%
TGGCCTACTTCAAAAATTAT+AGG + chr4_1:73213260-73213279 None:intergenic 30.0%
!!! TATAATTTTTGAAGTAGGCC+AGG - chr4_1:73213259-73213278 Msa0570840:intron 30.0%
! GAACTTATTGCACCAAATTT+TGG + chr4_1:73213363-73213382 None:intergenic 30.0%
! AATGTCTTCACACAATGTTT+TGG + chr4_1:73213389-73213408 None:intergenic 30.0%
AGACATTGATGAACTACATA+TGG - chr4_1:73213402-73213421 Msa0570840:intron 30.0%
CAATAATCACAATTAGCGAT+TGG + chr4_1:73213521-73213540 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr4_1:73213698-73213717 None:intergenic 30.0%
GACACATGAGTTTACTTTAA+AGG - chr4_1:73213996-73214015 Msa0570840:CDS 30.0%
! ACATGAGTTTACTTTAAAGG+AGG - chr4_1:73213999-73214018 Msa0570840:CDS 30.0%
! CATGAGTTTACTTTAAAGGA+GGG - chr4_1:73214000-73214019 Msa0570840:CDS 30.0%
! GTGAAGATGGAAAATTTTTG+AGG - chr4_1:73214030-73214049 Msa0570840:CDS 30.0%
CAATTGTGACATTTACAATG+AGG + chr4_1:73214422-73214441 None:intergenic 30.0%
CTCGTATAATATTTACAGTG+AGG - chr4_1:73214602-73214621 Msa0570840:intron 30.0%
! TGTACAGAGTATTAATTGGA+GGG + chr4_1:73215090-73215109 None:intergenic 30.0%
! GTAGTGTACAGAGTATTAAT+TGG + chr4_1:73215094-73215113 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr4_1:73215224-73215243 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr4_1:73215225-73215244 Msa0570840:intron 30.0%
ATATTCATCCAGGATTGATT+AGG - chr4_1:73215260-73215279 Msa0570840:intron 30.0%
TATTCATCCAGGATTGATTA+GGG - chr4_1:73215261-73215280 Msa0570840:intron 30.0%
AAGTAATTCTCTAGACCATA+AGG + chr4_1:73215552-73215571 None:intergenic 30.0%
!!! ATCCGGAAACTTCATTTTTT+CGG - chr4_1:73215709-73215728 Msa0570840:intron 30.0%
ATCCGAAAAAATGAAGTTTC+CGG + chr4_1:73215714-73215733 None:intergenic 30.0%
TTAGTGAGTTCATAATGTCA+TGG + chr4_1:73215798-73215817 None:intergenic 30.0%
ATCAACAGAAGTTCATTACA+TGG - chr4_1:73215820-73215839 Msa0570840:intron 30.0%
ATGATAGATATGATAGGTGA+AGG - chr4_1:73215927-73215946 Msa0570840:intron 30.0%
! GCTATTGTTTGGTAGTATAA+AGG - chr4_1:73216176-73216195 Msa0570840:intron 30.0%
TCGGATTTCATAATCTAGAA+TGG + chr4_1:73216250-73216269 None:intergenic 30.0%
TATGAAATCCGAAAACTTCA+AGG - chr4_1:73216258-73216277 Msa0570840:intron 30.0%
ATGAAATCCGAAAACTTCAA+GGG - chr4_1:73216259-73216278 Msa0570840:intron 30.0%
! AAAAATGCCCTTGAAGTTTT+CGG + chr4_1:73216269-73216288 None:intergenic 30.0%
!! TATTACTTTTCCCATCCTAT+GGG + chr4_1:73216320-73216339 None:intergenic 30.0%
!! GATCGTTCTATTCTGTTTTT+GGG + chr4_1:73216392-73216411 None:intergenic 30.0%
!!! ATGAACTCTATCCTTGTTTT+GGG + chr4_1:73216414-73216433 None:intergenic 30.0%
!! AATGAACTCTATCCTTGTTT+TGG + chr4_1:73216415-73216434 None:intergenic 30.0%
TAGTTCAGCACATATTACAT+CGG - chr4_1:73216489-73216508 Msa0570840:intron 30.0%
TTGCACATATCACACATAAT+TGG - chr4_1:73216526-73216545 Msa0570840:intron 30.0%
GACAATATCTTTGATCCTTA+AGG - chr4_1:73216627-73216646 Msa0570840:intron 30.0%
!!! TTTCAGCCATTGGTTTTTTT+CGG + chr4_1:73216835-73216854 None:intergenic 30.0%
!! AAATATCACTTTTCAGCCAT+TGG + chr4_1:73216845-73216864 None:intergenic 30.0%
GGAATGAAAAATGAAAATGC+AGG - chr4_1:73217064-73217083 Msa0570840:intron 30.0%
AGAAGTTGAATATTAAGTGG+TGG - chr4_1:73217242-73217261 Msa0570840:intron 30.0%
! GAATATTAAGTGGTGGAATA+TGG - chr4_1:73217249-73217268 Msa0570840:intron 30.0%
GTAAAAATAGATGGAGAGAA+AGG - chr4_1:73217385-73217404 Msa0570840:intron 30.0%
ATTTGTGGTAAACTATCAAG+AGG + chr4_1:73217434-73217453 None:intergenic 30.0%
! TACTATGGATTGACTATTTG+TGG + chr4_1:73217449-73217468 None:intergenic 30.0%
AAATAGTCAATCCATAGTAG+TGG - chr4_1:73217450-73217469 Msa0570840:intron 30.0%
! TAAAGATGAGTTTGTTCGAA+AGG + chr4_1:73217485-73217504 None:intergenic 30.0%
CATATTATATGCAGAGGTTT+GGG - chr4_1:73217899-73217918 Msa0570840:intron 30.0%
ATATTATATGCAGAGGTTTG+GGG - chr4_1:73217900-73217919 Msa0570840:intron 30.0%
TCAAGTAATCTAATGTACAG+GGG + chr4_1:73217947-73217966 None:intergenic 30.0%
GTCAAGTAATCTAATGTACA+GGG + chr4_1:73217948-73217967 None:intergenic 30.0%
GTTAGTAGTTAAAGTCATAG+AGG + chr4_1:73218028-73218047 None:intergenic 30.0%
AACTACTAACCATCTAACTA+TGG - chr4_1:73218038-73218057 Msa0570840:intron 30.0%
!! TGGCTTTAGTAAATAGTAAG+AGG - chr4_1:73218949-73218968 Msa0570840:intron 30.0%
! TATATTTTACTCTTGGTTGC+AGG - chr4_1:73218973-73218992 Msa0570840:intron 30.0%
TGTTACTCAAGTACTTGAAA+TGG - chr4_1:73219065-73219084 Msa0570840:intron 30.0%
GATGAATTCAAACGTATGTA+TGG - chr4_1:73219241-73219260 Msa0570840:intron 30.0%
CACAGAAAATTGTTAATGAG+TGG + chr4_1:73219302-73219321 None:intergenic 30.0%
TTCTTGATAAACTATGTGCA+AGG - chr4_1:73219343-73219362 Msa0570840:intron 30.0%
TGGATCCATAGATTGAAATA+AGG + chr4_1:73219378-73219397 None:intergenic 30.0%
CCAAGAAATCAACAATCATA+AGG + chr4_1:73219652-73219671 None:intergenic 30.0%
!! CCTTATGATTGTTGATTTCT+TGG - chr4_1:73219649-73219668 Msa0570840:intron 30.0%
! CGTACATTTTTATGAAAGTG+TGG - chr4_1:73219724-73219743 Msa0570840:intron 30.0%
!!! TAGTTTTGTTGTCAATGAAC+GGG + chr4_1:73219761-73219780 None:intergenic 30.0%
TTCTTATGCAAACATAGACA+AGG + chr4_1:73219981-73220000 None:intergenic 30.0%
TAGTCCCTTAACTTAATTTC+AGG + chr4_1:73220091-73220110 None:intergenic 30.0%
TAGCTAGACCCATATAATTT+AGG + chr4_1:73220128-73220147 None:intergenic 30.0%
ACAATTGAGTGTCTCTAATA+TGG + chr4_1:73220163-73220182 None:intergenic 30.0%
TCAATTGTGAGGTCTTAAAT+AGG - chr4_1:73220175-73220194 Msa0570840:intron 30.0%
AAAAATGATGTGTTCATGTG+GGG + chr4_1:73220201-73220220 None:intergenic 30.0%
ATTCCGATTCAGTCAAAATA+GGG + chr4_1:73220377-73220396 None:intergenic 30.0%
AATTCCGATTCAGTCAAAAT+AGG + chr4_1:73220378-73220397 None:intergenic 30.0%
!!! TTCAGAGTTTTAAAATAGGG+GGG + chr4_1:73220403-73220422 None:intergenic 30.0%
TCCGAAAAACATTAAATTGG+GGG + chr4_1:73221469-73221488 None:intergenic 30.0%
!!! TTTTTTGGTAGTGTAGGTTT+TGG + chr4_1:73220665-73220684 None:intergenic 30.0%
!!! TCAACTTTTTTTGGTAGTGT+AGG + chr4_1:73220671-73220690 None:intergenic 30.0%
!!! GTAGTGAGATCAACTTTTTT+TGG + chr4_1:73220680-73220699 None:intergenic 30.0%
! AAAAAGTTGATCTCACTACT+AGG - chr4_1:73220681-73220700 Msa0570840:intron 30.0%
! AAAAGTTGATCTCACTACTA+GGG - chr4_1:73220682-73220701 Msa0570840:intron 30.0%
CATACTTAAAAGAGTCACAA+CGG + chr4_1:73220947-73220966 None:intergenic 30.0%
!!! CAACTTTTAGCCTTGTATTT+TGG - chr4_1:73220997-73221016 Msa0570840:intron 30.0%
TCCGAAAAACATTAAATTGG+GGG - chr4_1:73221469-73221488 Msa0570840:intron 30.0%
!!! TTCTGAGTTTTAAAATAGGG+GGG - chr4_1:73221499-73221518 Msa0570840:intron 30.0%
TTCTGATTCAGTCAAAATAG+GGG - chr4_1:73221538-73221557 Msa0570840:intron 30.0%
!!! AATGTGGGAAATTTTTTTGG+GGG + chr4_1:73221636-73221655 None:intergenic 30.0%
!!! CAATGTGGGAAATTTTTTTG+GGG + chr4_1:73221637-73221656 None:intergenic 30.0%
!!! CTCAATGTGGGAAATTTTTT+TGG + chr4_1:73221639-73221658 None:intergenic 30.0%
CAAAAAAATTTCCCACATTG+AGG - chr4_1:73221637-73221656 Msa0570840:intron 30.0%
AGTATTTGTGGAGAACAATA+AGG - chr4_1:73222113-73222132 Msa0570840:intron 30.0%
TTAATTAGATATCCTGGATG+GGG + chr4_1:73222212-73222231 None:intergenic 30.0%
GTTTAATTAGATATCCTGGA+TGG + chr4_1:73222214-73222233 None:intergenic 30.0%
! TAGGTTGCGTTTTCAAAAGA+GGG + chr4_1:73210685-73210704 None:intergenic 35.0%
! AGAAGGTTATGAGATTTGGT+AGG + chr4_1:73210704-73210723 None:intergenic 35.0%
ATAACCTTCTACCCAAATCA+CGG - chr4_1:73210714-73210733 Msa0570840:three_prime_UTR 35.0%
! TTCTGGCTGAATCAAATGAT+TGG - chr4_1:73211050-73211069 Msa0570840:intron 35.0%
AAAACACTTGCCAATACGTA+CGG - chr4_1:73211199-73211218 Msa0570840:intron 35.0%
! TTTTTCTTCTTCATCAGTGG+CGG + chr4_1:73211728-73211747 None:intergenic 35.0%
GTCATTAAGCCTCATTAAAC+TGG - chr4_1:73212085-73212104 Msa0570840:intron 35.0%
ATTAAGCCTCATTAAACTGG+CGG - chr4_1:73212088-73212107 Msa0570840:intron 35.0%
AGACACCAACTTTGTTAGTT+TGG - chr4_1:73212111-73212130 Msa0570840:intron 35.0%
ACTAGCCAAACTAACAAAGT+TGG + chr4_1:73212119-73212138 None:intergenic 35.0%
GACAATTAAAAAGGAACGGA+GGG + chr4_1:73212292-73212311 None:intergenic 35.0%
TGACAATTAAAAAGGAACGG+AGG + chr4_1:73212293-73212312 None:intergenic 35.0%
TCTCCGCAGTAAATATCTAA+GGG + chr4_1:73212397-73212416 None:intergenic 35.0%
!! TATATGAGACGAGTTGATAG+GGG - chr4_1:73212733-73212752 Msa0570840:intron 35.0%
!! AGCTAAGCTTTAAATAGGCT+AGG + chr4_1:73212795-73212814 None:intergenic 35.0%
! AGCCTATTTAAAGCTTAGCT+CGG - chr4_1:73212795-73212814 Msa0570840:intron 35.0%
ACCTTGTTAATAAACGAGCT+GGG + chr4_1:73212821-73212840 None:intergenic 35.0%
TAATTAAATAGGCCAGGCTA+AGG - chr4_1:73212869-73212888 Msa0570840:intron 35.0%
!!! CTTTTTTATAAGCCTTAGCC+TGG + chr4_1:73212884-73212903 None:intergenic 35.0%
TATGAAGGCTTGAGTTTATG+AGG + chr4_1:73212986-73213005 None:intergenic 35.0%
AACTCAAGCCTTCATATGAA+TGG - chr4_1:73212990-73213009 Msa0570840:intron 35.0%
! CTTTAGGCCTTCGTAAATTT+TGG - chr4_1:73213089-73213108 Msa0570840:intron 35.0%
! ATAGGTTTACATGTGTTGCT+AGG - chr4_1:73213123-73213142 Msa0570840:intron 35.0%
! AGGCTTTTAAATAGGCTTTC+AGG - chr4_1:73213160-73213179 Msa0570840:intron 35.0%
ATGAGTCTATGACGAGTAAT+AGG - chr4_1:73213223-73213242 Msa0570840:intron 35.0%
TGATGAACTACATATGGTTG+AGG - chr4_1:73213408-73213427 Msa0570840:intron 35.0%
AACTACATATGGTTGAGGAT+AGG - chr4_1:73213413-73213432 Msa0570840:intron 35.0%
ATAGGTGAATGGACACATAT+AGG - chr4_1:73213431-73213450 Msa0570840:intron 35.0%
AGAGGACTAAAACGAAAAGT+TGG + chr4_1:73213667-73213686 None:intergenic 35.0%
TTTGAGGGACTAAAAGTTGA+AGG - chr4_1:73214046-73214065 Msa0570840:intron 35.0%
GAGGGACTAAAACAAAAAGT+TGG - chr4_1:73214078-73214097 Msa0570840:intron 35.0%
GATTCGTAAGAAAACTACGA+AGG - chr4_1:73214330-73214349 Msa0570840:intron 35.0%
CTTTGGACAACTTAACATTG+AGG - chr4_1:73214632-73214651 Msa0570840:intron 35.0%
! CAACTTAACATTGAGGTGTT+AGG - chr4_1:73214639-73214658 Msa0570840:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr4_1:73214990-73215009 None:intergenic 35.0%
! GTGTACAGAGTATTAATTGG+AGG + chr4_1:73215091-73215110 None:intergenic 35.0%
GGAGTAACTTATATTCATCC+AGG - chr4_1:73215250-73215269 Msa0570840:intron 35.0%
AAAACAACCCTAATCAATCC+TGG + chr4_1:73215271-73215290 None:intergenic 35.0%
!!! AATTACTTTTTCCACCCCAT+GGG - chr4_1:73215564-73215583 Msa0570840:intron 35.0%
AGTTTCCGGATTACAAAATC+TGG + chr4_1:73215700-73215719 None:intergenic 35.0%
!! GATCATTATTGCTTTTCTCG+AGG + chr4_1:73215862-73215881 None:intergenic 35.0%
! TTCATATCTTTTGTATCCGG+TGG + chr4_1:73215900-73215919 None:intergenic 35.0%
AATGTCATATGCAACCTACA+TGG - chr4_1:73216154-73216173 Msa0570840:intron 35.0%
!!! AACTTCAAGGGCATTTTTGA+AGG - chr4_1:73216271-73216290 Msa0570840:intron 35.0%
!! GTATTACTTTTCCCATCCTA+TGG + chr4_1:73216321-73216340 None:intergenic 35.0%
! GGATCGTTCTATTCTGTTTT+TGG + chr4_1:73216393-73216412 None:intergenic 35.0%
AATAGAACGATCCCAAAACA+AGG - chr4_1:73216400-73216419 Msa0570840:intron 35.0%
TTTACCATTAGCTACAGAGT+TGG - chr4_1:73216435-73216454 Msa0570840:intron 35.0%
!!! GACATTTTTCTAGTTGAGCT+AGG - chr4_1:73216597-73216616 Msa0570840:intron 35.0%
! GCTTTGTTAATTAGTTGAGC+TGG + chr4_1:73216719-73216738 None:intergenic 35.0%
CTACTACCGAAAAAAACCAA+TGG - chr4_1:73216826-73216845 Msa0570840:intron 35.0%
TCTAACAAGTGAAGTATGCA+CGG - chr4_1:73216997-73217016 Msa0570840:intron 35.0%
TGGAAATGAGCAAGAACATA+TGG + chr4_1:73217293-73217312 None:intergenic 35.0%
!! CTTATGCTCGACTATTTTGA+CGG - chr4_1:73217357-73217376 Msa0570840:intron 35.0%
!!! TTATGCTCGACTATTTTGAC+GGG - chr4_1:73217358-73217377 Msa0570840:intron 35.0%
ACGGGATGAGTAAAAATAGA+TGG - chr4_1:73217376-73217395 Msa0570840:intron 35.0%
GGATTGAAAAACCACTACTA+TGG + chr4_1:73217464-73217483 None:intergenic 35.0%
TATGTGAAGAAGAGAAAACG+AGG - chr4_1:73217541-73217560 Msa0570840:intron 35.0%
GCATATTATATGCAGAGGTT+TGG - chr4_1:73217898-73217917 Msa0570840:intron 35.0%
CAAGTAATCTAATGTACAGG+GGG + chr4_1:73217946-73217965 None:intergenic 35.0%
GGTCAAGTAATCTAATGTAC+AGG + chr4_1:73217949-73217968 None:intergenic 35.0%
TACTAACCATCTAACTATGG+TGG - chr4_1:73218041-73218060 Msa0570840:intron 35.0%
ACTTAACCACCATAGTTAGA+TGG + chr4_1:73218050-73218069 None:intergenic 35.0%
GTTATCTAGCTGAAAAAACG+TGG + chr4_1:73218391-73218410 None:intergenic 35.0%
CAGCAATTAATAGCGTGTTT+GGG + chr4_1:73218419-73218438 None:intergenic 35.0%
TCAGCAATTAATAGCGTGTT+TGG + chr4_1:73218420-73218439 None:intergenic 35.0%
!! AGGTATTTTTCAGTGATTGG+AGG - chr4_1:73218614-73218633 Msa0570840:intron 35.0%
!! GGTATTTTTCAGTGATTGGA+GGG - chr4_1:73218615-73218634 Msa0570840:intron 35.0%
AAAACAGCTAAGTGCAGAAT+TGG + chr4_1:73218735-73218754 None:intergenic 35.0%
!!! CTGTTTTTGTTTAGCTGTCA+GGG - chr4_1:73218748-73218767 Msa0570840:intron 35.0%
! AAGATTAGTGGTGCTAAGAA+TGG + chr4_1:73218818-73218837 None:intergenic 35.0%
TTCTTAGCACCACTAATCTT+TGG - chr4_1:73218818-73218837 Msa0570840:intron 35.0%
CCAAATATATGTCATAGGCA+TGG + chr4_1:73218897-73218916 None:intergenic 35.0%
CCATGCCTATGACATATATT+TGG - chr4_1:73218894-73218913 Msa0570840:intron 35.0%
CCACACCAAATATATGTCAT+AGG + chr4_1:73218902-73218921 None:intergenic 35.0%
! CCTATGACATATATTTGGTG+TGG - chr4_1:73218899-73218918 Msa0570840:intron 35.0%
ATGAACCTGTGATAGAGATA+TGG + chr4_1:73219116-73219135 None:intergenic 35.0%
!!! TTGATAATGTTTTCCACCGA+AGG + chr4_1:73219206-73219225 None:intergenic 35.0%
TCAAACGTATGTATGGTTTG+TGG - chr4_1:73219248-73219267 Msa0570840:intron 35.0%
TACTCAAATAGTGATGTTCG+TGG - chr4_1:73219517-73219536 Msa0570840:intron 35.0%
ATATACCTGCAAAATGGAGA+GGG + chr4_1:73219554-73219573 None:intergenic 35.0%
TATATACCTGCAAAATGGAG+AGG + chr4_1:73219555-73219574 None:intergenic 35.0%
!! ATTGTTGATTTCTTGGATGC+AGG - chr4_1:73219656-73219675 Msa0570840:intron 35.0%
GATTACTACCCTGAAAGATT+GGG - chr4_1:73219678-73219697 Msa0570840:intron 35.0%
ATTACTACCCTGAAAGATTG+GGG - chr4_1:73219679-73219698 Msa0570840:intron 35.0%
TCATAAAAATGTACGGTGCA+TGG + chr4_1:73219719-73219738 None:intergenic 35.0%
ATTAGAGACACTCAATTGTG+AGG - chr4_1:73220164-73220183 Msa0570840:intron 35.0%
! ACATTTTGTTAGAGTGTGAG+TGG + chr4_1:73220261-73220280 None:intergenic 35.0%
TTCCGATTCAGTCAAAATAG+GGG + chr4_1:73220376-73220395 None:intergenic 35.0%
CCGAAAAACATTAAATTGGG+GGG + chr4_1:73221470-73221489 None:intergenic 35.0%
! CCCCCCAATTTAATGTTTTT+CGG - chr4_1:73220428-73220447 Msa0570840:intron 35.0%
AAAAAATATCCGCAATGGGT+AGG - chr4_1:73220739-73220758 Msa0570840:intron 35.0%
AAAAATATCCGCAATGGGTA+GGG - chr4_1:73220740-73220759 Msa0570840:intron 35.0%
AATTTAGATGGGTATGAGTG+CGG - chr4_1:73220809-73220828 Msa0570840:intron 35.0%
! AATATGTATATGCGGGTTGT+GGG + chr4_1:73220858-73220877 None:intergenic 35.0%
! AAATATGTATATGCGGGTTG+TGG + chr4_1:73220859-73220878 None:intergenic 35.0%
AAAATGCACTCAAATGTGGT+GGG - chr4_1:73221437-73221456 Msa0570840:intron 35.0%
! CCCCCCAATTTAATGTTTTT+CGG + chr4_1:73220428-73220447 None:intergenic 35.0%
CCGAAAAACATTAAATTGGG+GGG - chr4_1:73221470-73221489 Msa0570840:intron 35.0%
CGAAAAACATTAAATTGGGG+GGG - chr4_1:73221471-73221490 Msa0570840:intron 35.0%
!!! TCTGAGTTTTAAAATAGGGG+GGG - chr4_1:73221500-73221519 Msa0570840:intron 35.0%
TCTGATTCAGTCAAAATAGG+GGG - chr4_1:73221539-73221558 Msa0570840:intron 35.0%
TTAAGACCCCAATACTTAAG+TGG + chr4_1:73221609-73221628 None:intergenic 35.0%
ATCCTTGCAGATAGTATTTG+TGG - chr4_1:73222101-73222120 Msa0570840:intron 35.0%
AGTTGTATTTCCAGTAACCA+TGG - chr4_1:73222375-73222394 Msa0570840:five_prime_UTR 35.0%
AAGAAGAATTCCATGGTTAC+TGG + chr4_1:73222388-73222407 None:intergenic 35.0%
GATTGCAAAGAAGAATTCCA+TGG + chr4_1:73222395-73222414 None:intergenic 35.0%
! GTAGGTTGCGTTTTCAAAAG+AGG + chr4_1:73210686-73210705 None:intergenic 40.0%
GGGTAGAAGGTTATGAGATT+TGG + chr4_1:73210708-73210727 None:intergenic 40.0%
AGTCGGAAATCAGTGAGAAT+CGG + chr4_1:73210748-73210767 None:intergenic 40.0%
CAGATCTGAATGAGAGAGAA+GGG + chr4_1:73210799-73210818 None:intergenic 40.0%
ACAGATCTGAATGAGAGAGA+AGG + chr4_1:73210800-73210819 None:intergenic 40.0%
TCATCTCTTTCACTCTCACA+AGG + chr4_1:73211471-73211490 None:intergenic 40.0%
GAGAGTGAAAGAGATGAACA+AGG - chr4_1:73211474-73211493 Msa0570840:intron 40.0%
! TCAATTCTGGGAACTTTAGC+AGG + chr4_1:73211519-73211538 None:intergenic 40.0%
CTACATCTCAACCTGTTAGT+TGG - chr4_1:73211553-73211572 Msa0570840:intron 40.0%
!!! TTTTTTTTTTGGCCCACCCT+CGG - chr4_1:73211688-73211707 Msa0570840:intron 40.0%
CTAGAAAAAATACCGAGGGT+GGG + chr4_1:73211703-73211722 None:intergenic 40.0%
GGAGCTAGAAAAAATACCGA+GGG + chr4_1:73211707-73211726 None:intergenic 40.0%
GATCAATATCGGAGACCATT+TGG - chr4_1:73212163-73212182 Msa0570840:intron 40.0%
CTCTCCGCAGTAAATATCTA+AGG + chr4_1:73212398-73212417 None:intergenic 40.0%
CTTTAAATAGGCTAGGCCAT+AGG + chr4_1:73212788-73212807 None:intergenic 40.0%
GACCTTGTTAATAAACGAGC+TGG + chr4_1:73212822-73212841 None:intergenic 40.0%
GCTCGTTTATTAACAAGGTC+AGG - chr4_1:73212822-73212841 Msa0570840:intron 40.0%
AAAAAGCCTATTAAGCCCGT+CGG - chr4_1:73212898-73212917 Msa0570840:intron 40.0%
! GCTAGGCTTTAGTGTAAACT+AGG - chr4_1:73213140-73213159 Msa0570840:intron 40.0%
AATAGGCTTTCAGGCTTCAT+CGG - chr4_1:73213169-73213188 Msa0570840:intron 40.0%
! TCGTCATAGACTCATTTTCG+AGG + chr4_1:73213218-73213237 None:intergenic 40.0%
AAAAATTATAGGCCTGAGCC+TGG + chr4_1:73213249-73213268 None:intergenic 40.0%
ATGAGTTACTCAACTCGTAG+GGG + chr4_1:73213326-73213345 None:intergenic 40.0%
CATGAGTTACTCAACTCGTA+GGG + chr4_1:73213327-73213346 None:intergenic 40.0%
ACATGAGTTACTCAACTCGT+AGG + chr4_1:73213328-73213347 None:intergenic 40.0%
GCTCCACTATGTCCAAAATT+TGG - chr4_1:73213348-73213367 Msa0570840:CDS 40.0%
! GCACCAAATTTTGGACATAG+TGG + chr4_1:73213354-73213373 None:intergenic 40.0%
TATGGTTGAGGATAGGTGAA+TGG - chr4_1:73213420-73213439 Msa0570840:intron 40.0%
!! ATTAGCGATTGGTCTTCATC+TGG + chr4_1:73213510-73213529 None:intergenic 40.0%
GCATCGTACTTTCATACATG+TGG + chr4_1:73214275-73214294 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4_1:73215229-73215248 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4_1:73215229-73215248 Msa0570840:intron 40.0%
!! TCACGGTACAAAGAGTGTTA+AGG + chr4_1:73215341-73215360 None:intergenic 40.0%
CCAGCCCAATACAACTATAA+AGG + chr4_1:73215503-73215522 None:intergenic 40.0%
CCTTTATAGTTGTATTGGGC+TGG - chr4_1:73215500-73215519 Msa0570840:intron 40.0%
TCTCTAGACCATAAGGTTTG+CGG + chr4_1:73215545-73215564 None:intergenic 40.0%
!!! GAATTACTTTTTCCACCCCA+TGG - chr4_1:73215563-73215582 Msa0570840:intron 40.0%
TATATGTCTTCTGCTGTACC+TGG + chr4_1:73216097-73216116 None:intergenic 40.0%
CAACCTACATGGCTATTGTT+TGG - chr4_1:73216165-73216184 Msa0570840:intron 40.0%
CTACCAAACAATAGCCATGT+AGG + chr4_1:73216171-73216190 None:intergenic 40.0%
AAAGCCAACTCTGTAGCTAA+TGG + chr4_1:73216442-73216461 None:intergenic 40.0%
TCACACATAATTGGACGAGT+TGG - chr4_1:73216535-73216554 Msa0570840:intron 40.0%
TAGATTGAACACCACGACTT+AGG + chr4_1:73216569-73216588 None:intergenic 40.0%
!! CAAGATTCTGGAGTCAAACA+CGG + chr4_1:73216769-73216788 None:intergenic 40.0%
CTCACACTATTGCAAGATTC+TGG + chr4_1:73216781-73216800 None:intergenic 40.0%
ACCAATTAGAGCTAAGCTCA+CGG + chr4_1:73217869-73217888 None:intergenic 40.0%
!! TGAGCTTAGCTCTAATTGGT+AGG - chr4_1:73217869-73217888 Msa0570840:intron 40.0%
TAATCTAATGTACAGGGGGT+GGG + chr4_1:73217942-73217961 None:intergenic 40.0%
TGCTGTAGTTAGTACTTGGT+AGG + chr4_1:73218228-73218247 None:intergenic 40.0%
ATGCTGCTGTAGTTAGTACT+TGG + chr4_1:73218232-73218251 None:intergenic 40.0%
ACAGAGGCTAATTCCCATTA+TGG + chr4_1:73218279-73218298 None:intergenic 40.0%
! TTTTGCCTAACGCTCCAAAT+TGG - chr4_1:73218332-73218351 Msa0570840:intron 40.0%
CAAAAGCTGAAGCTCCAATT+TGG + chr4_1:73218349-73218368 None:intergenic 40.0%
! GATTGGAGGGTGTAATACAT+TGG - chr4_1:73218628-73218647 Msa0570840:intron 40.0%
GCTAAGTGCAGAATTGGATT+TGG + chr4_1:73218729-73218748 None:intergenic 40.0%
!!! GCTGTTTTTGTTTAGCTGTC+AGG - chr4_1:73218747-73218766 Msa0570840:intron 40.0%
TTTGTTTAGCTGTCAGGGAT+TGG - chr4_1:73218753-73218772 Msa0570840:intron 40.0%
ACATGACTGCCAAAGATTAG+TGG + chr4_1:73218830-73218849 None:intergenic 40.0%
TCGTGATTTAGATGTGGAGA+AGG - chr4_1:73219033-73219052 Msa0570840:intron 40.0%
TGGTTCCATATCTCTATCAC+AGG - chr4_1:73219108-73219127 Msa0570840:intron 40.0%
! TGGTTTGTGGTAGTTAAGCT+AGG - chr4_1:73219261-73219280 Msa0570840:intron 40.0%
ACAAATTTCTCTTGTCCTGG+TGG + chr4_1:73219469-73219488 None:intergenic 40.0%
CCAACAAATTTCTCTTGTCC+TGG + chr4_1:73219472-73219491 None:intergenic 40.0%
CCAGGACAAGAGAAATTTGT+TGG - chr4_1:73219469-73219488 Msa0570840:intron 40.0%
TGTTGGTATAGCAGAACTCA+AGG - chr4_1:73219486-73219505 Msa0570840:intron 40.0%
GTTGGTATAGCAGAACTCAA+GGG - chr4_1:73219487-73219506 Msa0570840:intron 40.0%
TATAGCAGAACTCAAGGGAT+GGG - chr4_1:73219492-73219511 Msa0570840:intron 40.0%
AGTGATGTTCGTGGATACAT+TGG - chr4_1:73219526-73219545 Msa0570840:intron 40.0%
GGATTACTACCCTGAAAGAT+TGG - chr4_1:73219677-73219696 Msa0570840:intron 40.0%
ACAACTTCCCCAATCTTTCA+GGG + chr4_1:73219689-73219708 None:intergenic 40.0%
AACAACTTCCCCAATCTTTC+AGG + chr4_1:73219690-73219709 None:intergenic 40.0%
TGAGTGGATGAGTACCTATT+AGG + chr4_1:73220245-73220264 None:intergenic 40.0%
TCCGATTCAGTCAAAATAGG+GGG + chr4_1:73220375-73220394 None:intergenic 40.0%
!!! TATTTTTTGCGGGTGTCCAT+CGG + chr4_1:73220727-73220746 None:intergenic 40.0%
!!! CCATTGCGGATATTTTTTGC+GGG + chr4_1:73220737-73220756 None:intergenic 40.0%
!!! CCCATTGCGGATATTTTTTG+CGG + chr4_1:73220738-73220757 None:intergenic 40.0%
CCGCAAAAAATATCCGCAAT+GGG - chr4_1:73220735-73220754 Msa0570840:intron 40.0%
ATTTAGATGGGTATGAGTGC+GGG - chr4_1:73220810-73220829 Msa0570840:intron 40.0%
! ATATGTATATGCGGGTTGTG+GGG + chr4_1:73220857-73220876 None:intergenic 40.0%
AGCCAAAATGCACTCAAATG+TGG - chr4_1:73221433-73221452 Msa0570840:intron 40.0%
! CACCACATTTGAGTGCATTT+TGG + chr4_1:73221438-73221457 None:intergenic 40.0%
CAAAATGCACTCAAATGTGG+TGG - chr4_1:73221436-73221455 Msa0570840:intron 40.0%
AAATGCACTCAAATGTGGTG+GGG - chr4_1:73221438-73221457 Msa0570840:intron 40.0%
!!! CTGAGTTTTAAAATAGGGGG+GGG - chr4_1:73221501-73221520 Msa0570840:intron 40.0%
!!! TGAGTTTTAAAATAGGGGGG+GGG - chr4_1:73221502-73221521 Msa0570840:intron 40.0%
CTGATTCAGTCAAAATAGGG+GGG - chr4_1:73221540-73221559 Msa0570840:intron 40.0%
CTAATAGGTACCCTCAATGT+GGG + chr4_1:73221651-73221670 None:intergenic 40.0%
TATAAGACCCGGTACCTAAT+AGG + chr4_1:73221666-73221685 None:intergenic 40.0%
!! ATTAGGTACCGGGTCTTATA+TGG - chr4_1:73221666-73221685 Msa0570840:intron 40.0%
GGTCTTAACCATATAAGACC+CGG + chr4_1:73221677-73221696 None:intergenic 40.0%
!! GGATGGTCTTATACCCTTAA+AGG - chr4_1:73221707-73221726 Msa0570840:intron 40.0%
TGCTTATAATTGTGACCGGA+GGG + chr4_1:73221739-73221758 None:intergenic 40.0%
TTGCTTATAATTGTGACCGG+AGG + chr4_1:73221740-73221759 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr4_1:73221855-73221874 Msa0570840:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr4_1:73221856-73221875 Msa0570840:intron 40.0%
TCCTTAACATATACTCCCTC+CGG + chr4_1:73221874-73221893 None:intergenic 40.0%
CTCCACAAATACTATCTGCA+AGG + chr4_1:73222106-73222125 None:intergenic 40.0%
AGTCAACTCCCTGAGATATA+CGG - chr4_1:73222168-73222187 Msa0570840:intron 40.0%
TATTGCGGTACCGTACGTAT+TGG + chr4_1:73211212-73211231 None:intergenic 45.0%
! ACTTTAGCAGGTTGAGATGG+AGG + chr4_1:73211507-73211526 None:intergenic 45.0%
! GGAACTTTAGCAGGTTGAGA+TGG + chr4_1:73211510-73211529 None:intergenic 45.0%
GCTAGAAAAAATACCGAGGG+TGG + chr4_1:73211704-73211723 None:intergenic 45.0%
CGGAGCTAGAAAAAATACCG+AGG + chr4_1:73211708-73211727 None:intergenic 45.0%
!! GGCCGAGCTAAGCTTTAAAT+AGG + chr4_1:73212800-73212819 None:intergenic 45.0%
GCCCAGCTCGTTTATTAACA+AGG - chr4_1:73212817-73212836 Msa0570840:intron 45.0%
AAAAGCCTATTAAGCCCGTC+GGG - chr4_1:73212899-73212918 Msa0570840:intron 45.0%
ATAGGCTTTCAGGCTTCATC+GGG - chr4_1:73213170-73213189 Msa0570840:intron 45.0%
GCTTCATCGGGCCTTTAAAT+AGG - chr4_1:73213182-73213201 Msa0570840:intron 45.0%
!! ATAGACTCATTTTCGAGGCC+TGG + chr4_1:73213213-73213232 None:intergenic 45.0%
TCTATGACGAGTAATAGGCC+AGG - chr4_1:73213228-73213247 Msa0570840:intron 45.0%
!!! TTTTGAAGTAGGCCAGGCTT+AGG - chr4_1:73213265-73213284 Msa0570840:intron 45.0%
GGTGAATGGACACATATAGG+TGG - chr4_1:73213434-73213453 Msa0570840:intron 45.0%
TACAGTGAGGCAAAGAGCTT+TGG - chr4_1:73214615-73214634 Msa0570840:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr4_1:73215228-73215247 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr4_1:73215228-73215247 Msa0570840:intron 45.0%
!! ATAGTTGTATTGGGCTGGCA+TGG - chr4_1:73215505-73215524 Msa0570840:intron 45.0%
GGTTTGCGGGTATAGACATA+TGG + chr4_1:73215531-73215550 None:intergenic 45.0%
GTCTATACCCGCAAACCTTA+TGG - chr4_1:73215534-73215553 Msa0570840:intron 45.0%
CTCTAGACCATAAGGTTTGC+GGG + chr4_1:73215544-73215563 None:intergenic 45.0%
TAATCCGATGCCTGAAGAGA+TGG - chr4_1:73215991-73216010 Msa0570840:intron 45.0%
TATAGGTCGACCATCTCTTC+AGG + chr4_1:73216004-73216023 None:intergenic 45.0%
TCTAGTTGAGCTAGGACAAG+TGG - chr4_1:73216605-73216624 Msa0570840:intron 45.0%
CTGGAGTCAAACACGGATAA+AGG + chr4_1:73216762-73216781 None:intergenic 45.0%
TCAGCGTGAGTTAACTCAGT+AGG + chr4_1:73217316-73217335 None:intergenic 45.0%
CCAATTAGAGCTAAGCTCAC+GGG + chr4_1:73217868-73217887 None:intergenic 45.0%
GTAATCTAATGTACAGGGGG+TGG + chr4_1:73217943-73217962 None:intergenic 45.0%
GAGGCTAATTCCCATTATGG+CGG + chr4_1:73218276-73218295 None:intergenic 45.0%
TTAGCCTCTGTTTGTTTCCG+CGG - chr4_1:73218288-73218307 Msa0570840:intron 45.0%
!!! GTTTTGGAAAGGATCTACCG+CGG + chr4_1:73218308-73218327 None:intergenic 45.0%
GGTAGATCCTTTCCAAAACG+TGG - chr4_1:73218309-73218328 Msa0570840:intron 45.0%
!!! GGCAAAACCACGTTTTGGAA+AGG + chr4_1:73218319-73218338 None:intergenic 45.0%
! CGTTAGGCAAAACCACGTTT+TGG + chr4_1:73218324-73218343 None:intergenic 45.0%
! AAGCTCCAATTTGGAGCGTT+AGG + chr4_1:73218340-73218359 None:intergenic 45.0%
! AGCTTCAGCTTTTGCGCATT+GGG - chr4_1:73218355-73218374 Msa0570840:intron 45.0%
ACGAGCTCGTGATTTAGATG+TGG - chr4_1:73219027-73219046 Msa0570840:intron 45.0%
TAGCCAAATTGCAGACGACA+AGG - chr4_1:73219135-73219154 Msa0570840:intron 45.0%
CGACCTATACTCATTGCCTT+CGG - chr4_1:73219187-73219206 Msa0570840:intron 45.0%
GTATAGCAGAACTCAAGGGA+TGG - chr4_1:73219491-73219510 Msa0570840:intron 45.0%
ATAGCAGAACTCAAGGGATG+GGG - chr4_1:73219493-73219512 Msa0570840:intron 45.0%
!!! GCCCCCTATTTTGACTGAAT+CGG - chr4_1:73220371-73220390 Msa0570840:intron 45.0%
!! TTTTCAGGAGTTGGCTGATG+TGG - chr4_1:73220504-73220523 Msa0570840:intron 45.0%
GTTGATCTCACTACTAGGGA+TGG - chr4_1:73220686-73220705 Msa0570840:intron 45.0%
TCACTACTAGGGATGGCAAT+TGG - chr4_1:73220693-73220712 Msa0570840:intron 45.0%
!!! ATTTTTTGCGGGTGTCCATC+GGG + chr4_1:73220726-73220745 None:intergenic 45.0%
CCCGCAAAAAATATCCGCAA+TGG - chr4_1:73220734-73220753 Msa0570840:intron 45.0%
!! AGGGTAAAACCCCGCTTTTA+TGG - chr4_1:73220759-73220778 Msa0570840:intron 45.0%
!! GGGTAAAACCCCGCTTTTAT+GGG - chr4_1:73220760-73220779 Msa0570840:intron 45.0%
!! AAACCCCGCTTTTATGGGTA+TGG - chr4_1:73220765-73220784 Msa0570840:intron 45.0%
!! AACCCCGCTTTTATGGGTAT+GGG - chr4_1:73220766-73220785 Msa0570840:intron 45.0%
AAGCCCATACCCATAAAAGC+GGG + chr4_1:73220772-73220791 None:intergenic 45.0%
CAAGCCCATACCCATAAAAG+CGG + chr4_1:73220773-73220792 None:intergenic 45.0%
! GCTTTTATGGGTATGGGCTT+GGG - chr4_1:73220772-73220791 Msa0570840:intron 45.0%
!!! CATTTTGGCTCATGTGGCAA+TGG + chr4_1:73221423-73221442 None:intergenic 45.0%
!!! TGAGTGCATTTTGGCTCATG+TGG + chr4_1:73221429-73221448 None:intergenic 45.0%
AATGCACTCAAATGTGGTGG+GGG - chr4_1:73221439-73221458 Msa0570840:intron 45.0%
!!! GAGTTTTAAAATAGGGGGGG+GGG - chr4_1:73221503-73221522 Msa0570840:intron 45.0%
!!! AGTTTTAAAATAGGGGGGGG+GGG - chr4_1:73221504-73221523 Msa0570840:intron 45.0%
TGTGGGGTCCACTTAAGTAT+TGG - chr4_1:73221598-73221617 Msa0570840:intron 45.0%
GTGGGGTCCACTTAAGTATT+GGG - chr4_1:73221599-73221618 Msa0570840:intron 45.0%
! TGGGGTCCACTTAAGTATTG+GGG - chr4_1:73221600-73221619 Msa0570840:intron 45.0%
CCTAATAGGTACCCTCAATG+TGG + chr4_1:73221652-73221671 None:intergenic 45.0%
!! CCACATTGAGGGTACCTATT+AGG - chr4_1:73221649-73221668 Msa0570840:intron 45.0%
!! TGAGGGTACCTATTAGGTAC+CGG - chr4_1:73221655-73221674 Msa0570840:intron 45.0%
TGGTTAAGACCTCACCAATG+TGG - chr4_1:73221686-73221705 Msa0570840:intron 45.0%
TAAGACCTCACCAATGTGGA+TGG - chr4_1:73221690-73221709 Msa0570840:intron 45.0%
TAAGACCATCCACATTGGTG+AGG + chr4_1:73221698-73221717 None:intergenic 45.0%
GGGTATAAGACCATCCACAT+TGG + chr4_1:73221703-73221722 None:intergenic 45.0%
! ACCGGAGGGAGTATATGTTA+AGG - chr4_1:73221870-73221889 Msa0570840:intron 45.0%
GTTTGCCACCGTATATCTCA+GGG + chr4_1:73222179-73222198 None:intergenic 45.0%
AGTTTGCCACCGTATATCTC+AGG + chr4_1:73222180-73222199 None:intergenic 45.0%
!! AAATAAAATTTAATAGTATT+CGG - chr4_1:73213472-73213491 Msa0570840:intron 5.0%
!!! AAAAAATTCTAATTTTTTTT+TGG + chr4_1:73213822-73213841 None:intergenic 5.0%
!!! TAAAAAATTCTAAATTTTTT+TGG - chr4_1:73213914-73213933 Msa0570840:CDS 5.0%
!!! AAAAAATTCTAAATTTTTTT+GGG - chr4_1:73213915-73213934 Msa0570840:CDS 5.0%
!! AAAAAAAAAAAAAAAAAGAA+AGG + chr4_1:73215312-73215331 None:intergenic 5.0%
! GACACCGTGATTTGGGTAGA+AGG + chr4_1:73210721-73210740 None:intergenic 50.0%
! CTACCCAAATCACGGTGTCA+CGG - chr4_1:73210722-73210741 Msa0570840:three_prime_UTR 50.0%
!! TCTCACTGATTTCCGACTGC+CGG - chr4_1:73210750-73210769 Msa0570840:three_prime_UTR 50.0%
! AATGAGAGAGAAGGGAGTGC+CGG + chr4_1:73210791-73210810 None:intergenic 50.0%
CGTTACGCGATCCAACTAAC+AGG + chr4_1:73211567-73211586 None:intergenic 50.0%
GTGTCTCCGCCAGTTTAATG+AGG + chr4_1:73212097-73212116 None:intergenic 50.0%
!! ATGAGACGAGTTGATAGGGG+TGG - chr4_1:73212736-73212755 Msa0570840:intron 50.0%
!! TGAGACGAGTTGATAGGGGT+GGG - chr4_1:73212737-73212756 Msa0570840:intron 50.0%
!! GAGTTGATAGGGGTGGGAAT+AGG - chr4_1:73212743-73212762 Msa0570840:intron 50.0%
GCCTTTAAATAGGCCAGACC+AGG - chr4_1:73213192-73213211 Msa0570840:intron 50.0%
GCCTGGTCTGGCCTATTTAA+AGG + chr4_1:73213196-73213215 None:intergenic 50.0%
CAACTCGTAGGGGTGGAAAT+AGG + chr4_1:73213316-73213335 None:intergenic 50.0%
AGTTACTCAACTCGTAGGGG+TGG + chr4_1:73213323-73213342 None:intergenic 50.0%
!! AGCGATTGGTCTTCATCTGG+TGG + chr4_1:73213507-73213526 None:intergenic 50.0%
GGAGGGACCAAAAGTGAAGA+TGG - chr4_1:73214017-73214036 Msa0570840:CDS 50.0%
CAGAATTGCAGCAAAGCCAC+CGG - chr4_1:73215881-73215900 Msa0570840:intron 50.0%
TCGACCATCTCTTCAGGCAT+CGG + chr4_1:73215998-73216017 None:intergenic 50.0%
ACGCGAGAATCCCATAGGAT+GGG - chr4_1:73216307-73216326 Msa0570840:intron 50.0%
TGGAGTTCGAACCTAAGTCG+TGG - chr4_1:73216555-73216574 Msa0570840:intron 50.0%
GCGTGAGTTAACTCAGTAGG+TGG + chr4_1:73217313-73217332 None:intergenic 50.0%
!! CCCGTGAGCTTAGCTCTAAT+TGG - chr4_1:73217865-73217884 Msa0570840:intron 50.0%
! ATATGCAGAGGTTTGGGGCT+CGG - chr4_1:73217905-73217924 Msa0570840:intron 50.0%
TGACTGAGACACCGCCATAA+TGG - chr4_1:73218262-73218281 Msa0570840:intron 50.0%
GACTGAGACACCGCCATAAT+GGG - chr4_1:73218263-73218282 Msa0570840:intron 50.0%
TCTACCGCGGAAACAAACAG+AGG + chr4_1:73218295-73218314 None:intergenic 50.0%
! GAGCTTCAGCTTTTGCGCAT+TGG - chr4_1:73218354-73218373 Msa0570840:intron 50.0%
! AGGCCTTGTCGTCTGCAATT+TGG + chr4_1:73219141-73219160 None:intergenic 50.0%
ACCAATCTTGTCGCGTCCTT+GGG + chr4_1:73219167-73219186 None:intergenic 50.0%
CCACCGAAGGCAATGAGTAT+AGG + chr4_1:73219193-73219212 None:intergenic 50.0%
CCTATACTCATTGCCTTCGG+TGG - chr4_1:73219190-73219209 Msa0570840:intron 50.0%
TGATGTATCAGCATGCCACC+AGG - chr4_1:73219451-73219470 Msa0570840:intron 50.0%
! GGGTTTTACCCTACCCATTG+CGG + chr4_1:73220751-73220770 None:intergenic 50.0%
AGCCCATACCCATAAAAGCG+GGG + chr4_1:73220771-73220790 None:intergenic 50.0%
! CGCTTTTATGGGTATGGGCT+TGG - chr4_1:73220771-73220790 Msa0570840:intron 50.0%
ATGGGTATGAGTGCGGGTAA+GGG - chr4_1:73220816-73220835 Msa0570840:intron 50.0%
! CTCATGTGGCAATGGTGATG+TGG + chr4_1:73221415-73221434 None:intergenic 50.0%
! ATGCACTCAAATGTGGTGGG+GGG - chr4_1:73221440-73221459 Msa0570840:intron 50.0%
!!! GTTTTAAAATAGGGGGGGGG+GGG - chr4_1:73221505-73221524 Msa0570840:intron 50.0%
!!! TTTTAAAATAGGGGGGGGGG+GGG - chr4_1:73221506-73221525 Msa0570840:intron 50.0%
!! GAGGGTACCTATTAGGTACC+GGG - chr4_1:73221656-73221675 Msa0570840:intron 50.0%
! CGGAGGGAGTACACCTTTAA+GGG + chr4_1:73221723-73221742 None:intergenic 50.0%
! CCTTAAAGGTGTACTCCCTC+CGG - chr4_1:73221721-73221740 Msa0570840:intron 50.0%
CAACTCCCTGAGATATACGG+TGG - chr4_1:73222171-73222190 Msa0570840:intron 50.0%
ACTGCAATTAGTCCCCATCC+AGG - chr4_1:73222197-73222216 Msa0570840:intron 50.0%
!! CTCATTTTCGAGGCCTGGTC+TGG + chr4_1:73213208-73213227 None:intergenic 55.0%
ACGAGTAATAGGCCAGGCTC+AGG - chr4_1:73213234-73213253 Msa0570840:intron 55.0%
! GGCTTTGTAAGGCCTAAGCC+TGG + chr4_1:73213280-73213299 None:intergenic 55.0%
GGCTTAGGCCTTACAAAGCC+CGG - chr4_1:73213280-73213299 Msa0570840:intron 55.0%
CGTAGGGGTGGAAATAGGCT+AGG + chr4_1:73213311-73213330 None:intergenic 55.0%
CTCGAGGAGTCTCTGCTAGA+GGG + chr4_1:73215846-73215865 None:intergenic 55.0%
TCTCGAGGAGTCTCTGCTAG+AGG + chr4_1:73215847-73215866 None:intergenic 55.0%
CACGCGAGAATCCCATAGGA+TGG - chr4_1:73216306-73216325 Msa0570840:intron 55.0%
TGTACAGGGGGTGGGATGTT+CGG + chr4_1:73217934-73217953 None:intergenic 55.0%
TATGGCGGTGTCTCAGTCAG+CGG + chr4_1:73218261-73218280 None:intergenic 55.0%
GACCAATCTTGTCGCGTCCT+TGG + chr4_1:73219168-73219187 None:intergenic 55.0%
TAGGGATGGCAATTGGACCC+AGG - chr4_1:73220700-73220719 Msa0570840:intron 55.0%
TATGGGTATGGGCTTGGGTC+TGG - chr4_1:73220777-73220796 Msa0570840:intron 55.0%
ATGGGTATGGGCTTGGGTCT+GGG - chr4_1:73220778-73220797 Msa0570840:intron 55.0%
GATGGGTATGAGTGCGGGTA+AGG - chr4_1:73220815-73220834 Msa0570840:intron 55.0%
! TATATGCGGGTTGTGGGGCT+GGG + chr4_1:73220852-73220871 None:intergenic 55.0%
! TTTAAAATAGGGGGGGGGGG+GGG - chr4_1:73221507-73221526 Msa0570840:intron 55.0%
! CCGGAGGGAGTACACCTTTA+AGG + chr4_1:73221724-73221743 None:intergenic 55.0%
CGGCCGTGACACCGTGATTT+GGG + chr4_1:73210728-73210747 None:intergenic 60.0%
TCGGCCGTGACACCGTGATT+TGG + chr4_1:73210729-73210748 None:intergenic 60.0%
!! GGAGTGCCGGAGTAAGTGGT+CGG + chr4_1:73210778-73210797 None:intergenic 60.0%
!! GAAGGGAGTGCCGGAGTAAG+TGG + chr4_1:73210782-73210801 None:intergenic 60.0%
GATAGGGGTGGGAATAGGCC+AGG - chr4_1:73212748-73212767 Msa0570840:intron 60.0%
AATAGGCCAGGCCATCCGAC+AGG - chr4_1:73212760-73212779 Msa0570840:intron 60.0%
ATAGGCCAGGCCATCCGACA+GGG - chr4_1:73212761-73212780 Msa0570840:intron 60.0%
AGCTTAATAGGCCGGCCCGA+CGG + chr4_1:73212917-73212936 None:intergenic 60.0%
GGGTGGAAATAGGCTAGGCC+GGG + chr4_1:73213306-73213325 None:intergenic 60.0%
GGGGTGGAAATAGGCTAGGC+CGG + chr4_1:73213307-73213326 None:intergenic 60.0%
AGGGCGCACGAGAATCCCAT+GGG + chr4_1:73215582-73215601 None:intergenic 60.0%
TAGGGCGCACGAGAATCCCA+TGG + chr4_1:73215583-73215602 None:intergenic 60.0%
AGGGCACGCGAGAATCCCAT+AGG - chr4_1:73216302-73216321 Msa0570840:intron 60.0%
TACAGGGGGTGGGATGTTCG+GGG + chr4_1:73217932-73217951 None:intergenic 60.0%
GTACAGGGGGTGGGATGTTC+GGG + chr4_1:73217933-73217952 None:intergenic 60.0%
GCCCAAGGACGCGACAAGAT+TGG - chr4_1:73219163-73219182 Msa0570840:intron 60.0%
! TGGCGCCCTCTCCATTTTGC+AGG - chr4_1:73219546-73219565 Msa0570840:intron 60.0%
! GTATATGCGGGTTGTGGGGC+TGG + chr4_1:73220853-73220872 None:intergenic 60.0%
TTAAAATAGGGGGGGGGGGG+GGG - chr4_1:73221508-73221527 Msa0570840:intron 60.0%
!! AAGTGGTCGGTGCCGGCAGT+CGG + chr4_1:73210765-73210784 None:intergenic 65.0%
CCGGAGTAAGTGGTCGGTGC+CGG + chr4_1:73210772-73210791 None:intergenic 65.0%
!! CCGGCACCGACCACTTACTC+CGG - chr4_1:73210769-73210788 Msa0570840:three_prime_UTR 65.0%
TAGGCCAGGCCATCCGACAG+GGG - chr4_1:73212762-73212781 Msa0570840:intron 65.0%
GCTAGGCCATAGGCCCCTGT+CGG + chr4_1:73212778-73212797 None:intergenic 65.0%
GCCTATTAAGCCCGTCGGGC+CGG - chr4_1:73212903-73212922 Msa0570840:intron 65.0%
GCTTAATAGGCCGGCCCGAC+GGG + chr4_1:73212916-73212935 None:intergenic 65.0%
AGGCCTTACAAAGCCCGGCC+CGG - chr4_1:73213285-73213304 Msa0570840:intron 65.0%
GAAATAGGCTAGGCCGGGCC+GGG + chr4_1:73213301-73213320 None:intergenic 65.0%
GGAAATAGGCTAGGCCGGGC+CGG + chr4_1:73213302-73213321 None:intergenic 65.0%
CGCACGAGAATCCCATGGGG+TGG + chr4_1:73215578-73215597 None:intergenic 65.0%
GGGCGCACGAGAATCCCATG+GGG + chr4_1:73215581-73215600 None:intergenic 65.0%
GACGACAAGGCCTTCGCCCA+AGG - chr4_1:73219148-73219167 Msa0570840:intron 65.0%
CTTGTCGCGTCCTTGGGCGA+AGG + chr4_1:73219161-73219180 None:intergenic 65.0%
GCAATTGGACCCAGGCCCGA+TGG - chr4_1:73220708-73220727 Msa0570840:intron 65.0%
TAAAATAGGGGGGGGGGGGG+GGG - chr4_1:73221509-73221528 Msa0570840:intron 65.0%
TAGGCCCCTGTCGGATGGCC+TGG + chr4_1:73212769-73212788 None:intergenic 70.0%
GGCCATCCGACAGGGGCCTA+TGG - chr4_1:73212769-73212788 Msa0570840:intron 70.0%
GGCCATAGGCCCCTGTCGGA+TGG + chr4_1:73212774-73212793 None:intergenic 70.0%
! GCCGGCCCGACGGGCTTAAT+AGG + chr4_1:73212907-73212926 None:intergenic 70.0%
! AGGCCGGGCCGGGCTTTGTA+AGG + chr4_1:73213291-73213310 None:intergenic 70.0%
TGCGGGTGTCCATCGGGCCT+GGG + chr4_1:73220720-73220739 None:intergenic 70.0%
TTGCGGGTGTCCATCGGGCC+TGG + chr4_1:73220721-73220740 None:intergenic 70.0%
AAAATAGGGGGGGGGGGGGG+GGG - chr4_1:73221510-73221529 Msa0570840:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 73210658 73222418 73210658 ID=Msa0570840;Name=Msa0570840
chr4_1 mRNA 73210658 73222418 73210658 ID=Msa0570840-mRNA-1;Parent=Msa0570840;Name=Msa0570840-mRNA-1;_AED=0.35;_eAED=0.35;_QI=175|0.2|0.33|1|0.6|0.5|6|191|187
chr4_1 exon 73210658 73210965 73210658 ID=Msa0570840-mRNA-1:exon:25128;Parent=Msa0570840-mRNA-1
chr4_1 exon 73213336 73213398 73213336 ID=Msa0570840-mRNA-1:exon:25127;Parent=Msa0570840-mRNA-1
chr4_1 exon 73213509 73213614 73213509 ID=Msa0570840-mRNA-1:exon:25126;Parent=Msa0570840-mRNA-1
chr4_1 exon 73213712 73213748 73213712 ID=Msa0570840-mRNA-1:exon:25125;Parent=Msa0570840-mRNA-1
chr4_1 exon 73213823 73214055 73213823 ID=Msa0570840-mRNA-1:exon:25124;Parent=Msa0570840-mRNA-1
chr4_1 exon 73222236 73222418 73222236 ID=Msa0570840-mRNA-1:exon:25123;Parent=Msa0570840-mRNA-1
chr4_1 five_prime_UTR 73222244 73222418 73222244 ID=Msa0570840-mRNA-1:five_prime_utr;Parent=Msa0570840-mRNA-1
chr4_1 CDS 73222236 73222243 73222236 ID=Msa0570840-mRNA-1:cds;Parent=Msa0570840-mRNA-1
chr4_1 CDS 73213823 73214055 73213823 ID=Msa0570840-mRNA-1:cds;Parent=Msa0570840-mRNA-1
chr4_1 CDS 73213712 73213748 73213712 ID=Msa0570840-mRNA-1:cds;Parent=Msa0570840-mRNA-1
chr4_1 CDS 73213509 73213614 73213509 ID=Msa0570840-mRNA-1:cds;Parent=Msa0570840-mRNA-1
chr4_1 CDS 73213336 73213398 73213336 ID=Msa0570840-mRNA-1:cds;Parent=Msa0570840-mRNA-1
chr4_1 CDS 73210849 73210965 73210849 ID=Msa0570840-mRNA-1:cds;Parent=Msa0570840-mRNA-1
chr4_1 three_prime_UTR 73210658 73210848 73210658 ID=Msa0570840-mRNA-1:three_prime_utr;Parent=Msa0570840-mRNA-1
Gene Sequence

>Msa0570840

ATGGAAAGATTCTTACGAGCTCGTGATTTAGATGTGGAGAAGGCTTCAGCAATGTTACTCAAGTACTTGAAATGGAGACATTCATTTGTTTCAAATGGTTCCATATCTCTATCACAGGTTCATAGCCAAATTGCAGACGACAAGGCCTTCGCCCAAGGACGCGACAAGATTGGTCGACCTATACTCATTGCCTTCGGTGGAAAACATTATCAAAAGAAAGATGGTCTAGATGAATTCAAACGTTTTGTAGTTTATATTCTTGATAAACTATGTGCAAGCATGCCACCAGGACAAGAGAAATTTGTTGGTATAGCAGAACTCAAGGGATGGGGTTACTCAAATAGTGATGTTCGTGGATACATTGGCGCCCTCTCCATTTTGCAGGATTACTACCCTGAAAGATTGGGGAAGTTGTTTATTCTCCATGCACCGTACATTTTTATGAAAATAGTATTTGTGGAGAACAATAAGGTGAAATCAACACTTCTAGAAGACATAGATGAAAGTCAACTCCCTGAGATATACGGTGGCAAACTGCAATTAGTCCCCATCCAGGATATCTAA

Protein sequence

>Msa0570840

MERFLRARDLDVEKASAMLLKYLKWRHSFVSNGSISLSQVHSQIADDKAFAQGRDKIGRPILIAFGGKHYQKKDGLDEFKRFVVYILDKLCASMPPGQEKFVGIAELKGWGYSNSDVRGYIGALSILQDYYPERLGKLFILHAPYIFMKIVFVENNKVKSTLLEDIDESQLPEIYGGKLQLVPIQDI*