Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240030 | XP_003627690.1 | 91.255 | 263 | 12 | 2 | 1 | 257 | 1 | 258 | 1.08e-148 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240030 | G7LDL9 | 91.255 | 263 | 12 | 2 | 1 | 257 | 1 | 258 | 5.16e-149 | 426 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0060260 | Msa1240030 | -0.809877 | 1.522743e-50 | -8.615850e-47 |
| Msa0655860 | Msa1240030 | 0.806061 | 9.877078e-50 | -8.615850e-47 |
| Msa0824160 | Msa1240030 | 0.813730 | 2.207648e-51 | -8.615850e-47 |
| Msa0394530 | Msa1240030 | 0.809546 | 1.793717e-50 | -8.615850e-47 |
| Msa1102850 | Msa1240030 | 0.800396 | 1.470125e-48 | -8.615850e-47 |
| Msa1196960 | Msa1240030 | 0.823016 | 1.737650e-53 | -8.615850e-47 |
| Msa0538170 | Msa1240030 | 0.863917 | 1.767740e-64 | -8.615850e-47 |
| Msa0860110 | Msa1240030 | 0.804696 | 1.908650e-49 | -8.615850e-47 |
| Msa0967580 | Msa1240030 | 0.803009 | 4.276285e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240030 | MtrunA17_Chr8g0352001 | 91.255 | 263 | 12 | 2 | 1 | 257 | 1 | 258 | 9.94e-153 | 426 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240030 | AT3G12650.1 | 62.069 | 145 | 55 | 0 | 112 | 256 | 93 | 237 | 3.74e-59 | 187 |
Find 48 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCTTGGTGATTGAAATT+TGG | 0.177303 | 8_2:+22242265 | None:intergenic |
| CTGTTGGTCCTTCAATTTCT+TGG | 0.211992 | 8_2:+22242251 | None:intergenic |
| AATTGAGGGTTATTGAATAA+TGG | 0.223491 | 8_2:+22242508 | None:intergenic |
| AAGCAGGGTTGTAGCGTTAA+TGG | 0.261705 | 8_2:-22242152 | Msa1240030:CDS |
| ATTGAGGGTTATTGAATAAT+GGG | 0.310649 | 8_2:+22242509 | None:intergenic |
| AACATAAAAGCCAAACAAAA+AGG | 0.323093 | 8_2:+22242031 | None:intergenic |
| CCATCATTTCACGTAGGTTA+AGG | 0.350242 | 8_2:-22242588 | Msa1240030:CDS |
| AGAATGATGAAGAACATCTA+TGG | 0.362660 | 8_2:-22242178 | Msa1240030:CDS |
| TGGGAAAAGGGTTCAAAGAT+TGG | 0.365597 | 8_2:+22242484 | None:intergenic |
| AGAAGATGGGTTGTGGGAAA+AGG | 0.381688 | 8_2:+22242471 | None:intergenic |
| AGCAGGGTTGTAGCGTTAAT+GGG | 0.385029 | 8_2:-22242151 | Msa1240030:CDS |
| TAGAACCTCACGTGTTTCAT+TGG | 0.389620 | 8_2:+22242204 | None:intergenic |
| AATGCATTTCTTTAAGAAGA+TGG | 0.399399 | 8_2:-22241990 | Msa1240030:CDS |
| TGCACAGAAACCTCAGTAAT+AGG | 0.404185 | 8_2:+22242076 | None:intergenic |
| TGTATGATTGGATTGTCTGC+TGG | 0.407729 | 8_2:-22241872 | Msa1240030:CDS |
| GGTCTAGTTCAGCTTGGTGT+TGG | 0.421866 | 8_2:-22242130 | Msa1240030:CDS |
| CTAGTTCAGCTTGGTGTTGG+AGG | 0.427796 | 8_2:-22242127 | Msa1240030:CDS |
| GTTCAAAGATTGGAAATTGA+GGG | 0.434354 | 8_2:+22242494 | None:intergenic |
| GAAGATGGGTTGTGGGAAAA+GGG | 0.442441 | 8_2:+22242472 | None:intergenic |
| TTCAGCTTGGTGTTGGAGGA+TGG | 0.443225 | 8_2:-22242123 | Msa1240030:CDS |
| GGTTCAAAGATTGGAAATTG+AGG | 0.450503 | 8_2:+22242493 | None:intergenic |
| TTCAATCACCAAGAAATTGA+AGG | 0.456501 | 8_2:-22242259 | Msa1240030:CDS |
| GATAAATCTCTTTCCACTGT+TGG | 0.464528 | 8_2:+22242235 | None:intergenic |
| CCTTAACCTACGTGAAATGA+TGG | 0.489382 | 8_2:+22242588 | None:intergenic |
| ATCTTCTTAAAGAAATGCAT+TGG | 0.490998 | 8_2:+22241992 | None:intergenic |
| AAAAGGAAGAAGATGGGTTG+TGG | 0.492900 | 8_2:+22242464 | None:intergenic |
| AAAGGAAGAAGATGGGTTGT+GGG | 0.503419 | 8_2:+22242465 | None:intergenic |
| AGAAGATGGAGGAACAAGGT+AGG | 0.513175 | 8_2:-22241976 | Msa1240030:CDS |
| TGATGATGATGATGGATCAT+TGG | 0.515281 | 8_2:+22242348 | None:intergenic |
| AACTTTGTGTGATGAGAAAG+TGG | 0.521491 | 8_2:+22242423 | None:intergenic |
| AGAACATCTATGGATTAAGC+AGG | 0.522495 | 8_2:-22242168 | Msa1240030:CDS |
| TTTGTTTGTTAGGGTTTGTG+GGG | 0.527906 | 8_2:-22241906 | Msa1240030:CDS |
| TTTGTTGTGGTTTCTAGATG+AGG | 0.528558 | 8_2:-22241842 | None:intergenic |
| TGATAGAGATTGAAAATGAG+AGG | 0.536123 | 8_2:+22242543 | None:intergenic |
| GATAGAGATTGAAAATGAGA+GGG | 0.552913 | 8_2:+22242544 | None:intergenic |
| AAGATCTTCACCTATTACTG+AGG | 0.576591 | 8_2:-22242086 | Msa1240030:CDS |
| AGGGTTATTGAATAATGGGT+TGG | 0.578922 | 8_2:+22242513 | None:intergenic |
| TTGCTCAATTCACAAAACCC+AGG | 0.611576 | 8_2:-22242381 | Msa1240030:CDS |
| AGAAATTGAAGGACCAACAG+TGG | 0.624497 | 8_2:-22242248 | Msa1240030:CDS |
| TCACGTGTTTCATTGGCAAG+TGG | 0.626960 | 8_2:+22242211 | None:intergenic |
| GCATTTCTTTAAGAAGATGG+AGG | 0.630980 | 8_2:-22241987 | Msa1240030:CDS |
| TTAATGGGTCTAGTTCAGCT+TGG | 0.631380 | 8_2:-22242136 | Msa1240030:CDS |
| TTTAAGAAGATGGAGGAACA+AGG | 0.631641 | 8_2:-22241980 | Msa1240030:CDS |
| GAACATCTATGGATTAAGCA+GGG | 0.659368 | 8_2:-22242167 | Msa1240030:CDS |
| ACTTTGTGTGATGAGAAAGT+GGG | 0.666657 | 8_2:+22242424 | None:intergenic |
| TAACCTACGTGAAATGATGG+CGG | 0.697668 | 8_2:+22242591 | None:intergenic |
| ACTTGCCAATGAAACACGTG+AGG | 0.719425 | 8_2:-22242209 | Msa1240030:CDS |
| TGGCCGCCATCATTTCACGT+AGG | 0.726547 | 8_2:-22242594 | Msa1240030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTGAATATTTTGTTTGTT+AGG | - | chr8_2:22242523-22242542 | Msa1240030:CDS | 20.0% |
| !!! | GTTGAATATTTTGTTTGTTA+GGG | - | chr8_2:22242524-22242543 | Msa1240030:CDS | 20.0% |
| !!! | AGTTGAATATTTTGTTTGTT+AGG | - | chr8_2:22242523-22242542 | Msa1240030:CDS | 20.0% |
| !!! | GTTGAATATTTTGTTTGTTA+GGG | - | chr8_2:22242524-22242543 | Msa1240030:CDS | 20.0% |
| ! | ATTGAGGGTTATTGAATAAT+GGG | + | chr8_2:22241933-22241952 | None:intergenic | 25.0% |
| ! | AATTGAGGGTTATTGAATAA+TGG | + | chr8_2:22241934-22241953 | None:intergenic | 25.0% |
| !!! | TTTTGTTGATTGAGAGAAAA+AGG | + | chr8_2:22241995-22242014 | None:intergenic | 25.0% |
| !! | TGAAATTTGGATTTTCACTT+GGG | + | chr8_2:22242164-22242183 | None:intergenic | 25.0% |
| !! | TTGAAATTTGGATTTTCACT+TGG | + | chr8_2:22242165-22242184 | None:intergenic | 25.0% |
| !! | ATTTCTTGGTGATTGAAATT+TGG | + | chr8_2:22242177-22242196 | None:intergenic | 25.0% |
| ! | AACATAAAAGCCAAACAAAA+AGG | + | chr8_2:22242411-22242430 | None:intergenic | 25.0% |
| ! | ATCTTCTTAAAGAAATGCAT+TGG | + | chr8_2:22242450-22242469 | None:intergenic | 25.0% |
| !! | AATGCATTTCTTTAAGAAGA+TGG | - | chr8_2:22242449-22242468 | Msa1240030:CDS | 25.0% |
| !! | GTTTCTTTTCTTTGTATGAT+TGG | - | chr8_2:22242555-22242574 | Msa1240030:CDS | 25.0% |
| ! | ATTGAGGGTTATTGAATAAT+GGG | + | chr8_2:22241933-22241952 | None:intergenic | 25.0% |
| ! | AATTGAGGGTTATTGAATAA+TGG | + | chr8_2:22241934-22241953 | None:intergenic | 25.0% |
| !!! | TTTTGTTGATTGAGAGAAAA+AGG | + | chr8_2:22241995-22242014 | None:intergenic | 25.0% |
| !! | TGAAATTTGGATTTTCACTT+GGG | + | chr8_2:22242164-22242183 | None:intergenic | 25.0% |
| !! | TTGAAATTTGGATTTTCACT+TGG | + | chr8_2:22242165-22242184 | None:intergenic | 25.0% |
| !! | ATTTCTTGGTGATTGAAATT+TGG | + | chr8_2:22242177-22242196 | None:intergenic | 25.0% |
| ! | AACATAAAAGCCAAACAAAA+AGG | + | chr8_2:22242411-22242430 | None:intergenic | 25.0% |
| ! | ATCTTCTTAAAGAAATGCAT+TGG | + | chr8_2:22242450-22242469 | None:intergenic | 25.0% |
| !! | AATGCATTTCTTTAAGAAGA+TGG | - | chr8_2:22242449-22242468 | Msa1240030:CDS | 25.0% |
| !! | GTTTCTTTTCTTTGTATGAT+TGG | - | chr8_2:22242555-22242574 | Msa1240030:CDS | 25.0% |
| ! | ATTGAAAATGAGAGGGTTTT+AGG | + | chr8_2:22241891-22241910 | None:intergenic | 30.0% |
| GATAGAGATTGAAAATGAGA+GGG | + | chr8_2:22241898-22241917 | None:intergenic | 30.0% | |
| TGATAGAGATTGAAAATGAG+AGG | + | chr8_2:22241899-22241918 | None:intergenic | 30.0% | |
| GTTCAAAGATTGGAAATTGA+GGG | + | chr8_2:22241948-22241967 | None:intergenic | 30.0% | |
| ! | GTTTTGTGAATTGAGCAAAA+TGG | + | chr8_2:22242056-22242075 | None:intergenic | 30.0% |
| !! | TCATTGGTTGATAAAAACCT+GGG | + | chr8_2:22242078-22242097 | None:intergenic | 30.0% |
| !! | ATCATTGGTTGATAAAAACC+TGG | + | chr8_2:22242079-22242098 | None:intergenic | 30.0% |
| TTCAATCACCAAGAAATTGA+AGG | - | chr8_2:22242180-22242199 | Msa1240030:CDS | 30.0% | |
| AGAATGATGAAGAACATCTA+TGG | - | chr8_2:22242261-22242280 | Msa1240030:CDS | 30.0% | |
| ! | TTTTGCGTTTCCTTTTTGTT+TGG | - | chr8_2:22242398-22242417 | Msa1240030:CDS | 30.0% |
| !! | ATTTTGTTTGTTAGGGTTTG+TGG | - | chr8_2:22242531-22242550 | Msa1240030:CDS | 30.0% |
| !! | TTTTGTTTGTTAGGGTTTGT+GGG | - | chr8_2:22242532-22242551 | Msa1240030:CDS | 30.0% |
| ! | ATTGAAAATGAGAGGGTTTT+AGG | + | chr8_2:22241891-22241910 | None:intergenic | 30.0% |
| GATAGAGATTGAAAATGAGA+GGG | + | chr8_2:22241898-22241917 | None:intergenic | 30.0% | |
| TGATAGAGATTGAAAATGAG+AGG | + | chr8_2:22241899-22241918 | None:intergenic | 30.0% | |
| GTTCAAAGATTGGAAATTGA+GGG | + | chr8_2:22241948-22241967 | None:intergenic | 30.0% | |
| ! | GTTTTGTGAATTGAGCAAAA+TGG | + | chr8_2:22242056-22242075 | None:intergenic | 30.0% |
| !! | TCATTGGTTGATAAAAACCT+GGG | + | chr8_2:22242078-22242097 | None:intergenic | 30.0% |
| !! | ATCATTGGTTGATAAAAACC+TGG | + | chr8_2:22242079-22242098 | None:intergenic | 30.0% |
| TTCAATCACCAAGAAATTGA+AGG | - | chr8_2:22242180-22242199 | Msa1240030:CDS | 30.0% | |
| AGAATGATGAAGAACATCTA+TGG | - | chr8_2:22242261-22242280 | Msa1240030:CDS | 30.0% | |
| ! | TTTTGCGTTTCCTTTTTGTT+TGG | - | chr8_2:22242398-22242417 | Msa1240030:CDS | 30.0% |
| !! | ATTTTGTTTGTTAGGGTTTG+TGG | - | chr8_2:22242531-22242550 | Msa1240030:CDS | 30.0% |
| !! | TTTTGTTTGTTAGGGTTTGT+GGG | - | chr8_2:22242532-22242551 | Msa1240030:CDS | 30.0% |
| !! | AGGGTTATTGAATAATGGGT+TGG | + | chr8_2:22241929-22241948 | None:intergenic | 35.0% |
| GGTTCAAAGATTGGAAATTG+AGG | + | chr8_2:22241949-22241968 | None:intergenic | 35.0% | |
| GAGAGAAAAAGGAAGAAGAT+GGG | + | chr8_2:22241984-22242003 | None:intergenic | 35.0% | |
| TGAGAGAAAAAGGAAGAAGA+TGG | + | chr8_2:22241985-22242004 | None:intergenic | 35.0% | |
| ACTTTGTGTGATGAGAAAGT+GGG | + | chr8_2:22242018-22242037 | None:intergenic | 35.0% | |
| AACTTTGTGTGATGAGAAAG+TGG | + | chr8_2:22242019-22242038 | None:intergenic | 35.0% | |
| !! | TGATGATGATGATGGATCAT+TGG | + | chr8_2:22242094-22242113 | None:intergenic | 35.0% |
| ! | GATGATGATGATGATGATGA+TGG | + | chr8_2:22242102-22242121 | None:intergenic | 35.0% |
| ! | TTGGATTTTCACTTGGGTAT+TGG | + | chr8_2:22242158-22242177 | None:intergenic | 35.0% |
| GATAAATCTCTTTCCACTGT+TGG | + | chr8_2:22242207-22242226 | None:intergenic | 35.0% | |
| ! | AGAACATCTATGGATTAAGC+AGG | - | chr8_2:22242271-22242290 | Msa1240030:CDS | 35.0% |
| ! | GAACATCTATGGATTAAGCA+GGG | - | chr8_2:22242272-22242291 | Msa1240030:CDS | 35.0% |
| AAGATCTTCACCTATTACTG+AGG | - | chr8_2:22242353-22242372 | Msa1240030:CDS | 35.0% | |
| ! | GCATTTCTTTAAGAAGATGG+AGG | - | chr8_2:22242452-22242471 | Msa1240030:CDS | 35.0% |
| TTTAAGAAGATGGAGGAACA+AGG | - | chr8_2:22242459-22242478 | Msa1240030:CDS | 35.0% | |
| ! | TTTGTTTGTTAGGGTTTGTG+GGG | - | chr8_2:22242533-22242552 | Msa1240030:CDS | 35.0% |
| !!! | TGCTGGTTTAGTTTTTGTTG+TGG | - | chr8_2:22242584-22242603 | Msa1240030:CDS | 35.0% |
| !! | AGGGTTATTGAATAATGGGT+TGG | + | chr8_2:22241929-22241948 | None:intergenic | 35.0% |
| GGTTCAAAGATTGGAAATTG+AGG | + | chr8_2:22241949-22241968 | None:intergenic | 35.0% | |
| GAGAGAAAAAGGAAGAAGAT+GGG | + | chr8_2:22241984-22242003 | None:intergenic | 35.0% | |
| TGAGAGAAAAAGGAAGAAGA+TGG | + | chr8_2:22241985-22242004 | None:intergenic | 35.0% | |
| ACTTTGTGTGATGAGAAAGT+GGG | + | chr8_2:22242018-22242037 | None:intergenic | 35.0% | |
| AACTTTGTGTGATGAGAAAG+TGG | + | chr8_2:22242019-22242038 | None:intergenic | 35.0% | |
| !! | TGATGATGATGATGGATCAT+TGG | + | chr8_2:22242094-22242113 | None:intergenic | 35.0% |
| ! | GATGATGATGATGATGATGA+TGG | + | chr8_2:22242102-22242121 | None:intergenic | 35.0% |
| ! | TTGGATTTTCACTTGGGTAT+TGG | + | chr8_2:22242158-22242177 | None:intergenic | 35.0% |
| GATAAATCTCTTTCCACTGT+TGG | + | chr8_2:22242207-22242226 | None:intergenic | 35.0% | |
| ! | AGAACATCTATGGATTAAGC+AGG | - | chr8_2:22242271-22242290 | Msa1240030:CDS | 35.0% |
| ! | GAACATCTATGGATTAAGCA+GGG | - | chr8_2:22242272-22242291 | Msa1240030:CDS | 35.0% |
| AAGATCTTCACCTATTACTG+AGG | - | chr8_2:22242353-22242372 | Msa1240030:CDS | 35.0% | |
| ! | GCATTTCTTTAAGAAGATGG+AGG | - | chr8_2:22242452-22242471 | Msa1240030:CDS | 35.0% |
| TTTAAGAAGATGGAGGAACA+AGG | - | chr8_2:22242459-22242478 | Msa1240030:CDS | 35.0% | |
| ! | TTTGTTTGTTAGGGTTTGTG+GGG | - | chr8_2:22242533-22242552 | Msa1240030:CDS | 35.0% |
| !!! | TGCTGGTTTAGTTTTTGTTG+TGG | - | chr8_2:22242584-22242603 | Msa1240030:CDS | 35.0% |
| TAACCTACGTGAAATGATGG+CGG | + | chr8_2:22241851-22241870 | None:intergenic | 40.0% | |
| CCTTAACCTACGTGAAATGA+TGG | + | chr8_2:22241854-22241873 | None:intergenic | 40.0% | |
| CCATCATTTCACGTAGGTTA+AGG | - | chr8_2:22241851-22241870 | Msa1240030:CDS | 40.0% | |
| !!! | AGAGGGTTTTAGGATTGAAG+AGG | + | chr8_2:22241881-22241900 | None:intergenic | 40.0% |
| TGGGAAAAGGGTTCAAAGAT+TGG | + | chr8_2:22241958-22241977 | None:intergenic | 40.0% | |
| !! | AAAGGAAGAAGATGGGTTGT+GGG | + | chr8_2:22241977-22241996 | None:intergenic | 40.0% |
| !! | AAAAGGAAGAAGATGGGTTG+TGG | + | chr8_2:22241978-22241997 | None:intergenic | 40.0% |
| TTGCTCAATTCACAAAACCC+AGG | - | chr8_2:22242058-22242077 | Msa1240030:CDS | 40.0% | |
| CTGTTGGTCCTTCAATTTCT+TGG | + | chr8_2:22242191-22242210 | None:intergenic | 40.0% | |
| AGAAATTGAAGGACCAACAG+TGG | - | chr8_2:22242191-22242210 | Msa1240030:CDS | 40.0% | |
| TAGAACCTCACGTGTTTCAT+TGG | + | chr8_2:22242238-22242257 | None:intergenic | 40.0% | |
| ! | TTAATGGGTCTAGTTCAGCT+TGG | - | chr8_2:22242303-22242322 | Msa1240030:CDS | 40.0% |
| TGCACAGAAACCTCAGTAAT+AGG | + | chr8_2:22242366-22242385 | None:intergenic | 40.0% | |
| ! | GGTTTCTGTGCAAAGCTTTT+TGG | - | chr8_2:22242374-22242393 | Msa1240030:CDS | 40.0% |
| TGTATGATTGGATTGTCTGC+TGG | - | chr8_2:22242567-22242586 | Msa1240030:CDS | 40.0% | |
| TAACCTACGTGAAATGATGG+CGG | + | chr8_2:22241851-22241870 | None:intergenic | 40.0% | |
| CCTTAACCTACGTGAAATGA+TGG | + | chr8_2:22241854-22241873 | None:intergenic | 40.0% | |
| CCATCATTTCACGTAGGTTA+AGG | - | chr8_2:22241851-22241870 | Msa1240030:CDS | 40.0% | |
| !!! | AGAGGGTTTTAGGATTGAAG+AGG | + | chr8_2:22241881-22241900 | None:intergenic | 40.0% |
| TGGGAAAAGGGTTCAAAGAT+TGG | + | chr8_2:22241958-22241977 | None:intergenic | 40.0% | |
| !! | AAAGGAAGAAGATGGGTTGT+GGG | + | chr8_2:22241977-22241996 | None:intergenic | 40.0% |
| !! | AAAAGGAAGAAGATGGGTTG+TGG | + | chr8_2:22241978-22241997 | None:intergenic | 40.0% |
| TTGCTCAATTCACAAAACCC+AGG | - | chr8_2:22242058-22242077 | Msa1240030:CDS | 40.0% | |
| CTGTTGGTCCTTCAATTTCT+TGG | + | chr8_2:22242191-22242210 | None:intergenic | 40.0% | |
| AGAAATTGAAGGACCAACAG+TGG | - | chr8_2:22242191-22242210 | Msa1240030:CDS | 40.0% | |
| TAGAACCTCACGTGTTTCAT+TGG | + | chr8_2:22242238-22242257 | None:intergenic | 40.0% | |
| ! | TTAATGGGTCTAGTTCAGCT+TGG | - | chr8_2:22242303-22242322 | Msa1240030:CDS | 40.0% |
| TGCACAGAAACCTCAGTAAT+AGG | + | chr8_2:22242366-22242385 | None:intergenic | 40.0% | |
| ! | GGTTTCTGTGCAAAGCTTTT+TGG | - | chr8_2:22242374-22242393 | Msa1240030:CDS | 40.0% |
| TGTATGATTGGATTGTCTGC+TGG | - | chr8_2:22242567-22242586 | Msa1240030:CDS | 40.0% | |
| !! | GAAGATGGGTTGTGGGAAAA+GGG | + | chr8_2:22241970-22241989 | None:intergenic | 45.0% |
| !! | AGAAGATGGGTTGTGGGAAA+AGG | + | chr8_2:22241971-22241990 | None:intergenic | 45.0% |
| TCACGTGTTTCATTGGCAAG+TGG | + | chr8_2:22242231-22242250 | None:intergenic | 45.0% | |
| ACTTGCCAATGAAACACGTG+AGG | - | chr8_2:22242230-22242249 | Msa1240030:CDS | 45.0% | |
| AAGCAGGGTTGTAGCGTTAA+TGG | - | chr8_2:22242287-22242306 | Msa1240030:CDS | 45.0% | |
| AGCAGGGTTGTAGCGTTAAT+GGG | - | chr8_2:22242288-22242307 | Msa1240030:CDS | 45.0% | |
| AGAAGATGGAGGAACAAGGT+AGG | - | chr8_2:22242463-22242482 | Msa1240030:CDS | 45.0% | |
| !! | GAAGATGGGTTGTGGGAAAA+GGG | + | chr8_2:22241970-22241989 | None:intergenic | 45.0% |
| !! | AGAAGATGGGTTGTGGGAAA+AGG | + | chr8_2:22241971-22241990 | None:intergenic | 45.0% |
| TCACGTGTTTCATTGGCAAG+TGG | + | chr8_2:22242231-22242250 | None:intergenic | 45.0% | |
| ACTTGCCAATGAAACACGTG+AGG | - | chr8_2:22242230-22242249 | Msa1240030:CDS | 45.0% | |
| AAGCAGGGTTGTAGCGTTAA+TGG | - | chr8_2:22242287-22242306 | Msa1240030:CDS | 45.0% | |
| AGCAGGGTTGTAGCGTTAAT+GGG | - | chr8_2:22242288-22242307 | Msa1240030:CDS | 45.0% | |
| AGAAGATGGAGGAACAAGGT+AGG | - | chr8_2:22242463-22242482 | Msa1240030:CDS | 45.0% | |
| !! | GGTCTAGTTCAGCTTGGTGT+TGG | - | chr8_2:22242309-22242328 | Msa1240030:CDS | 50.0% |
| !! | CTAGTTCAGCTTGGTGTTGG+AGG | - | chr8_2:22242312-22242331 | Msa1240030:CDS | 50.0% |
| !! | TTCAGCTTGGTGTTGGAGGA+TGG | - | chr8_2:22242316-22242335 | Msa1240030:CDS | 50.0% |
| !! | GGTCTAGTTCAGCTTGGTGT+TGG | - | chr8_2:22242309-22242328 | Msa1240030:CDS | 50.0% |
| !! | CTAGTTCAGCTTGGTGTTGG+AGG | - | chr8_2:22242312-22242331 | Msa1240030:CDS | 50.0% |
| !! | TTCAGCTTGGTGTTGGAGGA+TGG | - | chr8_2:22242316-22242335 | Msa1240030:CDS | 50.0% |
| TGGCCGCCATCATTTCACGT+AGG | - | chr8_2:22241845-22241864 | Msa1240030:CDS | 55.0% | |
| TGGCCGCCATCATTTCACGT+AGG | - | chr8_2:22241845-22241864 | Msa1240030:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 22241844 | 22242617 | 22241844 | ID=Msa1240030;Name=Msa1240030 |
| chr8_2 | mRNA | 22241844 | 22242617 | 22241844 | ID=Msa1240030-mRNA-1;Parent=Msa1240030;Name=Msa1240030-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|-1|0|1|-1|1|1|0|257 |
| chr8_2 | exon | 22241844 | 22242617 | 22241844 | ID=Msa1240030-mRNA-1:exon:7927;Parent=Msa1240030-mRNA-1 |
| chr8_2 | CDS | 22241844 | 22242617 | 22241844 | ID=Msa1240030-mRNA-1:cds;Parent=Msa1240030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
