AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1427860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1427860 MtrunA17_Chr1g0196661 93.088 217 15 0 206 422 1 217 1.27e-148 422
Msa1427860 MtrunA17_Chr1g0196661 79.330 179 36 1 7 185 1 178 1.36e-101 303
Msa1427860 MtrunA17_Chr1g0196721 89.252 214 23 0 209 422 3 216 5.25e-137 392
Msa1427860 MtrunA17_Chr1g0196721 78.977 176 36 1 10 185 3 177 1.38e-97 292
Msa1427860 MtrunA17_Chr1g0196691 76.132 243 56 2 182 422 1 243 4.06e-131 379
Msa1427860 MtrunA17_Chr1g0196691 92.973 185 13 0 1 185 20 204 3.22e-123 358
Msa1427860 MtrunA17_Chr1g0196711 83.410 217 36 0 206 422 1 217 1.13e-130 377
Msa1427860 MtrunA17_Chr1g0196711 75.978 179 42 1 7 185 1 178 2.94e-94 284
Msa1427860 MtrunA17_Chr4g0029341 69.767 215 65 0 208 422 4 218 3.07e-109 322
Msa1427860 MtrunA17_Chr4g0029341 65.341 176 60 1 9 184 4 178 1.81e-78 243
Msa1427860 MtrunA17_Chr1g0212301 48.131 214 108 2 206 417 1 213 1.53e-63 205
Msa1427860 MtrunA17_Chr1g0212301 43.575 179 99 2 7 184 1 178 2.89e-44 154
Msa1427860 MtrunA17_Chr1g0196771 49.528 212 104 2 206 416 1 210 9.20e-63 203
Msa1427860 MtrunA17_Chr1g0196771 46.857 175 91 1 7 181 1 173 1.11e-47 164
Msa1427860 MtrunA17_Chr3g0132581 47.619 210 106 2 206 413 1 208 8.01e-61 198
Msa1427860 MtrunA17_Chr3g0132581 46.927 179 88 4 7 182 1 175 1.28e-45 158
Msa1427860 MtrunA17_Chr5g0417011 42.661 218 121 2 207 420 6 223 6.61e-56 185
Msa1427860 MtrunA17_Chr5g0417011 40.984 183 101 4 6 183 4 184 1.57e-41 147
Msa1427860 MtrunA17_Chr4g0008791 43.662 213 116 2 207 418 6 215 5.53e-55 182
Msa1427860 MtrunA17_Chr4g0008791 43.575 179 96 3 8 185 6 180 3.85e-41 146
Msa1427860 MtrunA17_Chr4g0008781 43.694 222 121 3 202 422 2 220 1.09e-54 182
Msa1427860 MtrunA17_Chr4g0008781 49.693 163 76 4 9 170 8 165 2.23e-44 155
Msa1427860 MtrunA17_Chr7g0240631 44.186 215 114 4 209 421 8 218 6.09e-54 180
Msa1427860 MtrunA17_Chr7g0240631 42.857 175 95 3 10 183 8 178 1.37e-40 145
Msa1427860 MtrunA17_Chr7g0240641 44.651 215 113 4 209 421 8 218 2.13e-53 179
Msa1427860 MtrunA17_Chr7g0240641 44.000 175 93 3 10 183 8 178 4.99e-42 149
Msa1427860 MtrunA17_Chr8g0379581 42.920 226 123 2 208 433 5 224 4.82e-53 177
Msa1427860 MtrunA17_Chr8g0379581 44.886 176 90 3 9 182 5 175 3.58e-40 144
Msa1427860 MtrunA17_Chr2g0312771 43.981 216 116 3 208 422 4 215 9.67e-53 177
Msa1427860 MtrunA17_Chr2g0312771 41.509 212 111 7 9 214 4 208 4.83e-41 145
Msa1427860 MtrunA17_Chr7g0240691 42.105 228 120 5 194 418 28 246 1.69e-52 177
Msa1427860 MtrunA17_Chr7g0240691 43.169 183 92 3 6 183 34 209 2.45e-41 148
Msa1427860 MtrunA17_Chr7g0240681 44.131 213 114 2 208 418 7 216 1.85e-52 176
Msa1427860 MtrunA17_Chr7g0240681 48.408 157 75 3 9 163 7 159 8.07e-42 148
Msa1427860 MtrunA17_Chr2g0312751 44.286 210 112 3 208 416 4 209 3.87e-52 175
Msa1427860 MtrunA17_Chr2g0312751 40.952 210 115 6 9 214 4 208 1.08e-39 142
Msa1427860 MtrunA17_Chr7g0240511 43.439 221 116 4 208 427 7 219 7.87e-52 174
Msa1427860 MtrunA17_Chr7g0240511 43.787 169 88 2 9 177 7 168 4.88e-38 138
Msa1427860 MtrunA17_Chr6g0483141 42.534 221 123 3 206 425 1 218 1.27e-51 174
Msa1427860 MtrunA17_Chr6g0483141 42.045 176 99 2 7 182 1 173 1.03e-41 147
Msa1427860 MtrunA17_Chr2g0312721 44.076 211 113 3 208 417 4 210 1.44e-51 174
Msa1427860 MtrunA17_Chr2g0312721 47.468 158 77 4 9 164 4 157 3.15e-41 146
Msa1427860 MtrunA17_Chr8g0379561 42.986 221 123 2 208 428 6 223 1.18e-50 171
Msa1427860 MtrunA17_Chr8g0379561 43.429 175 96 2 9 183 6 177 1.50e-38 139
Msa1427860 MtrunA17_Chr2g0312731 41.748 206 115 3 208 412 4 205 3.19e-50 170
Msa1427860 MtrunA17_Chr2g0312731 41.799 189 103 5 9 193 4 189 1.05e-38 139
Msa1427860 MtrunA17_Chr7g0240561 41.441 222 124 4 208 427 7 224 4.25e-50 170
Msa1427860 MtrunA17_Chr7g0240561 44.848 165 81 5 9 170 7 164 6.96e-37 135
Msa1427860 MtrunA17_Chr7g0240671 43.333 210 111 3 209 417 5 207 1.24e-49 169
Msa1427860 MtrunA17_Chr7g0240671 50.649 154 73 2 10 163 5 155 1.44e-40 145
Msa1427860 MtrunA17_Chr2g0312811 41.509 212 117 4 208 416 4 211 2.44e-49 168
Msa1427860 MtrunA17_Chr2g0312811 40.000 195 104 6 9 195 4 193 6.69e-37 135
Msa1427860 MtrunA17_Chr7g0240611 41.553 219 120 3 204 421 3 214 3.21e-49 167
Msa1427860 MtrunA17_Chr7g0240611 44.000 175 91 2 9 183 7 174 5.74e-41 145
Msa1427860 MtrunA17_Chr2g0312781 42.718 206 113 3 208 412 21 222 6.95e-49 167
Msa1427860 MtrunA17_Chr2g0312781 42.473 186 96 6 16 195 28 208 3.21e-38 139
Msa1427860 MtrunA17_Chr2g0312791 43.119 218 117 5 208 422 4 217 8.55e-49 166
Msa1427860 MtrunA17_Chr2g0312791 44.792 192 98 6 9 195 4 192 1.19e-43 153
Msa1427860 MtrunA17_Chr7g0240581 40.724 221 125 4 209 427 8 224 2.15e-48 165
Msa1427860 MtrunA17_Chr7g0240581 45.342 161 84 2 10 170 8 164 1.94e-37 136
Msa1427860 MtrunA17_Chr5g0415411 41.589 214 119 3 208 415 5 218 5.21e-48 164
Msa1427860 MtrunA17_Chr5g0415411 41.711 187 90 5 9 183 5 184 9.10e-39 140
Msa1427860 MtrunA17_Chr8g0363751 43.172 227 121 5 207 426 4 229 1.17e-47 164
Msa1427860 MtrunA17_Chr8g0363751 41.304 184 97 7 8 183 4 184 4.75e-36 133
Msa1427860 MtrunA17_Chr7g0240551 39.819 221 129 2 208 427 7 224 1.88e-47 163
Msa1427860 MtrunA17_Chr7g0240551 40.678 177 102 1 9 185 7 180 6.59e-36 132
Msa1427860 MtrunA17_Chr7g0240541 40.271 221 128 2 208 427 7 224 6.51e-47 161
Msa1427860 MtrunA17_Chr7g0240541 42.857 175 97 1 9 183 7 178 8.83e-37 134
Msa1427860 MtrunA17_Chr7g0240531 39.819 221 129 2 208 427 7 224 4.21e-45 157
Msa1427860 MtrunA17_Chr7g0240531 40.000 175 102 1 9 183 7 178 1.90e-33 125
Msa1427860 MtrunA17_Chr2g0312681 41.784 213 119 3 208 419 4 212 7.14e-44 153
Msa1427860 MtrunA17_Chr2g0312681 37.850 214 116 7 9 214 4 208 7.09e-35 129
Msa1427860 MtrunA17_Chr7g0240661 43.810 210 110 3 208 416 7 209 5.62e-43 151
Msa1427860 MtrunA17_Chr7g0240661 44.633 177 91 2 9 185 7 176 1.86e-34 128
Msa1427860 MtrunA17_Chr7g0240521 40.517 232 131 5 199 427 5 232 2.03e-42 150
Msa1427860 MtrunA17_Chr7g0240521 41.011 178 100 3 9 185 14 187 2.22e-33 125
Msa1427860 MtrunA17_Chr7g0240651 41.981 212 115 3 208 418 7 211 3.51e-42 149
Msa1427860 MtrunA17_Chr7g0240651 45.562 169 85 3 9 175 7 170 1.58e-34 128
Msa1427860 MtrunA17_Chr3g0107731 39.048 210 123 3 207 415 8 213 4.28e-42 149
Msa1427860 MtrunA17_Chr3g0107731 37.931 203 117 6 16 214 16 213 2.15e-34 128
Msa1427860 MtrunA17_Chr3g0107741 38.710 217 128 3 209 424 10 222 1.75e-41 147
Msa1427860 MtrunA17_Chr3g0107741 37.561 205 115 7 16 214 16 213 2.73e-35 130
Msa1427860 MtrunA17_Chr8g0357241 40.887 203 115 4 215 416 11 209 6.14e-41 145
Msa1427860 MtrunA17_Chr8g0357241 43.575 179 89 5 9 182 4 175 1.94e-33 125
Msa1427860 MtrunA17_Chr4g0069471 45.714 175 91 3 208 380 25 197 3.93e-40 143
Msa1427860 MtrunA17_Chr4g0069471 41.573 178 95 6 9 182 25 197 5.89e-33 124
Msa1427860 MtrunA17_Chr2g0312691 40.845 213 121 3 208 419 4 212 5.87e-40 143
Msa1427860 MtrunA17_Chr2g0312691 35.238 210 127 5 9 214 4 208 4.55e-33 124
Msa1427860 MtrunA17_Chr8g0357211 39.409 203 118 3 215 416 11 209 8.90e-40 142
Msa1427860 MtrunA17_Chr8g0357211 39.252 214 113 7 9 214 4 208 6.84e-34 127
Msa1427860 MtrunA17_Chr5g0433801 38.235 204 121 3 214 416 12 211 5.15e-38 138
Msa1427860 MtrunA17_Chr5g0433801 44.000 150 76 5 16 162 13 157 2.34e-29 114
Msa1427860 MtrunA17_Chr2g0312711 40.092 217 116 5 208 419 4 211 8.74e-38 137
Msa1427860 MtrunA17_Chr2g0312711 39.698 199 110 5 9 202 4 197 3.12e-34 127
Msa1427860 MtrunA17_Chr8g0391631 48.101 158 74 5 206 356 19 175 2.62e-36 132
Msa1427860 MtrunA17_Chr8g0391631 42.593 162 82 7 5 158 17 175 9.51e-33 122
Msa1427860 MtrunA17_Chr2g0313561 61.017 59 22 1 252 309 2 60 2.71e-19 82.0
Msa1427860 MtrunA17_Chr2g0313561 64.286 56 19 1 53 107 2 57 5.52e-19 81.3
Msa1427860 MtrunA17_Chr5g0415421 48.611 72 34 1 234 302 13 84 2.12e-14 69.7
Msa1427860 MtrunA17_Chr5g0415421 43.056 72 38 1 35 103 13 84 3.78e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1427860 AT3G09270.1 46.479 213 110 3 209 419 7 217 3.45e-55 184
Msa1427860 AT3G09270.1 52.229 157 68 6 10 163 7 159 8.09e-42 148
Msa1427860 AT2G29420.1 42.791 215 121 1 208 422 9 221 1.20e-53 179
Msa1427860 AT2G29420.1 40.805 174 100 2 9 182 9 179 6.47e-38 138
Msa1427860 AT2G29460.1 40.000 220 129 2 208 426 7 224 2.21e-53 179
Msa1427860 AT2G29460.1 43.030 165 91 3 6 170 4 165 3.20e-38 139
Msa1427860 AT2G29450.1 42.982 228 120 4 204 426 2 224 2.67e-53 179
Msa1427860 AT2G29450.1 45.732 164 83 3 9 170 6 165 1.21e-40 145
Msa1427860 AT2G29470.1 40.278 216 125 3 209 422 8 221 3.37e-51 173
Msa1427860 AT2G29470.1 46.012 163 82 4 10 170 8 166 4.01e-42 149
Msa1427860 AT2G29440.1 42.152 223 120 4 208 426 6 223 1.26e-50 171
Msa1427860 AT2G29440.1 44.048 168 85 5 6 170 3 164 1.99e-36 134
Msa1427860 AT2G29480.1 40.183 219 128 2 209 426 8 224 1.30e-50 172
Msa1427860 AT2G29480.1 40.964 166 93 3 6 170 4 165 5.26e-35 130
Msa1427860 AT1G10370.1 42.601 223 123 3 207 424 4 226 1.71e-50 171
Msa1427860 AT1G10370.1 42.308 182 97 4 8 183 4 183 1.76e-39 142
Msa1427860 AT2G29490.1 40.183 219 128 2 209 426 8 224 9.23e-50 169
Msa1427860 AT2G29490.1 44.578 166 87 3 6 170 4 165 4.71e-41 146
Msa1427860 AT1G59670.1 41.593 226 126 4 208 427 6 231 1.46e-49 169
Msa1427860 AT1G59670.1 44.505 182 92 6 9 183 6 185 6.54e-40 144
Msa1427860 AT1G78340.1 42.584 209 115 3 208 415 4 208 1.30e-47 163
Msa1427860 AT1G78340.1 39.252 214 117 7 9 216 4 210 6.54e-42 148
Msa1427860 AT1G78370.1 41.748 206 115 4 211 415 7 208 8.04e-47 161
Msa1427860 AT1G78370.1 44.099 161 86 4 16 175 11 168 1.08e-38 140
Msa1427860 AT1G17180.1 39.815 216 125 3 208 422 4 215 1.35e-46 161
Msa1427860 AT1G17180.1 44.118 170 87 5 9 175 4 168 8.14e-38 137
Msa1427860 AT1G59700.1 41.743 218 121 4 208 419 6 223 1.97e-46 161
Msa1427860 AT1G59700.1 44.828 174 87 6 9 175 6 177 2.17e-38 139
Msa1427860 AT1G78380.1 42.130 216 120 4 208 422 4 215 1.82e-45 158
Msa1427860 AT1G78380.1 40.415 193 104 6 9 195 4 191 3.16e-35 130
Msa1427860 AT5G62480.1 37.220 223 133 2 208 423 8 230 2.35e-45 158
Msa1427860 AT5G62480.1 40.110 182 95 5 12 183 11 188 5.65e-38 139
Msa1427860 AT1G10360.1 42.222 225 122 5 208 426 5 227 4.25e-45 157
Msa1427860 AT1G10360.1 42.529 174 90 4 9 175 5 175 8.62e-36 132
Msa1427860 AT1G78320.1 40.580 207 118 3 208 413 4 206 1.22e-44 155
Msa1427860 AT1G78320.1 40.099 202 108 7 9 204 4 198 4.08e-38 138
Msa1427860 AT1G74590.1 36.283 226 141 2 203 425 2 227 3.04e-44 155
Msa1427860 AT1G74590.1 44.203 138 75 2 6 142 4 140 1.48e-33 126
Msa1427860 AT1G17170.1 41.706 211 117 5 208 417 4 209 4.02e-44 154
Msa1427860 AT1G17170.1 41.000 200 108 7 9 204 4 197 3.01e-38 139
Msa1427860 AT1G78360.1 39.535 215 124 4 207 419 3 213 4.15e-42 149
Msa1427860 AT1G78360.1 37.089 213 122 7 8 214 3 209 1.27e-34 129
Msa1427860 AT1G69930.1 40.284 211 122 3 209 415 13 223 2.62e-41 147
Msa1427860 AT1G69930.1 40.113 177 99 4 10 181 13 187 3.33e-34 128
Msa1427860 AT1G27130.1 40.845 213 120 4 209 415 7 219 3.52e-41 147
Msa1427860 AT1G27130.1 39.779 181 104 3 10 185 7 187 9.59e-34 127
Msa1427860 AT1G17190.1 35.648 216 134 3 208 422 5 216 1.72e-40 145
Msa1427860 AT1G17190.1 38.462 195 107 7 16 204 12 199 1.90e-34 129
Msa1427860 AT3G43800.1 37.615 218 129 4 208 421 5 219 3.67e-39 141
Msa1427860 AT3G43800.1 42.073 164 87 5 9 167 5 165 1.17e-30 118
Msa1427860 AT1G53680.1 38.614 202 117 4 214 412 13 210 1.22e-38 140
Msa1427860 AT1G53680.1 44.937 158 75 6 16 167 14 165 1.78e-33 126
Msa1427860 AT1G27140.1 39.207 227 131 4 204 423 2 228 2.49e-38 140
Msa1427860 AT1G27140.1 43.094 181 94 6 10 183 7 185 3.08e-33 126
Msa1427860 AT1G69920.1 38.158 228 132 5 197 415 20 247 3.65e-38 139
Msa1427860 AT1G69920.1 38.919 185 98 6 10 184 35 214 4.59e-32 123
Msa1427860 AT5G62480.3 30.631 222 122 2 208 423 8 203 1.69e-29 115
Msa1427860 AT5G62480.3 31.285 179 88 4 12 183 11 161 1.12e-22 96.3
Msa1427860 AT5G62480.2 30.631 222 123 2 208 423 8 204 2.00e-29 115
Msa1427860 AT5G62480.2 31.285 179 89 4 12 183 11 162 1.24e-22 96.3
Msa1427860 AT1G78320.2 33.010 206 108 3 208 413 4 179 1.24e-27 109
Msa1427860 AT1G78320.2 31.841 201 99 7 9 204 4 171 6.78e-20 87.8

Find 109 sgRNAs with CRISPR-Local

Find 638 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCCCTCGATTGCATTTA+TGG 0.096900 tig0026227:+12706 Msa1427860:CDS
TGGTATACCTTTCAAATTTA+AGG 0.140225 tig0026227:-11558 None:intergenic
GGTATAGCCCTTTCACTTTA+AGG 0.144203 tig0026227:+284 Msa1427860:CDS
ACAGAGCTCAAGCAAGATTT+TGG 0.157759 tig0026227:+521 Msa1427860:CDS
ACAGAGCTCAAGCCCGATTT+TGG 0.174441 tig0026227:+11762 Msa1427860:CDS
AGAAGGCCAGAGAGAATTTA+TGG 0.204560 tig0026227:+12526 Msa1427860:CDS
AGCTATGTCTACAATGTTAA+TGG 0.243167 tig0026227:-2348 None:intergenic
ATGGTATACCCTTCAGATTT+AGG 0.246118 tig0026227:-318 None:intergenic
GCATCTTCTTGAGAAAATTA+TGG 0.268793 tig0026227:+12833 Msa1427860:CDS
GCACTCCTCTATAGCAAAAT+TGG 0.275055 tig0026227:+12492 Msa1427860:CDS
AATGATCAGAATAAGTTCTA+TGG 0.275936 tig0026227:+2317 Msa1427860:CDS
CATACTACCCTTAAAGTAAA+AGG 0.285985 tig0026227:-11533 None:intergenic
TGGTATACCCTTCAGATTTA+GGG 0.296861 tig0026227:-317 None:intergenic
AAAGTCCAGGGATAATTTAT+TGG 0.296970 tig0026227:+2262 Msa1427860:CDS
AGCTATGTCTACAATGTTAA+TGG 0.297246 tig0026227:-12613 None:intergenic
AGGTGAAACTACATGGATTT+TGG 0.302285 tig0026227:+11504 Msa1427860:CDS
TATCAAATTTATTGAGGTTC+AGG 0.304577 tig0026227:+12647 Msa1427860:CDS
GTATAGCCCTTTCACTTTAA+GGG 0.310873 tig0026227:+285 Msa1427860:CDS
TCCACCTAAACAGAGGTATT+TGG 0.321002 tig0026227:+13089 Msa1427860:three_prime_UTR
TAGCTGCTTAATGTTGTCTT+TGG 0.329612 tig0026227:+12931 Msa1427860:exon
TGTACCAAATACCTCTGTTT+AGG 0.340791 tig0026227:-13093 None:intergenic
AAATTATGGCTTATATGAAT+TGG 0.351412 tig0026227:+12847 Msa1427860:CDS
ACAAAGCATTTGTATCTTCA+TGG 0.352326 tig0026227:+12873 Msa1427860:CDS
CAACATATTTAACCCAAAAT+CGG 0.352973 tig0026227:-11775 None:intergenic
CGATGGAACGCCACAATTGC+CGG 0.355415 tig0026227:-2212 None:intergenic
TTCCATCGAAGCATAATTAA+AGG 0.356302 tig0026227:+2227 Msa1427860:CDS
GCCACCAACTTCTCTTGGTC+AGG 0.366758 tig0026227:-12771 None:intergenic
AGGTGGAGAACAAAATTATA+AGG 0.378381 tig0026227:-13073 None:intergenic
TTGAATACATTGATGAGATA+TGG 0.380718 tig0026227:+464 Msa1427860:CDS
TCGGGCTTGAGCTCTGTCAT+AGG 0.384467 tig0026227:-11756 None:intergenic
ACTGGAGTCTTCTTGTGTAT+TGG 0.392101 tig0026227:-397 None:intergenic
AATGATCATGGACTCACATA+TGG 0.394155 tig0026227:-11681 None:intergenic
TGTTGTTCATCAGATGTGAT+TGG 0.399875 tig0026227:+5837 Msa1427860:intron
AGTTATTGAGGATAAGTGTT+TGG 0.399876 tig0026227:+12560 Msa1427860:CDS
GGTTAAATATGTTGATGAAT+TGG 0.403400 tig0026227:+11784 Msa1427860:CDS
GTTGTTCATCAGATGTGATT+GGG 0.405585 tig0026227:+5838 Msa1427860:intron
CTTGCTTGAGCTCTGTCATA+TGG 0.416587 tig0026227:-514 None:intergenic
AACATATTTAACCCAAAATC+GGG 0.426033 tig0026227:-11774 None:intergenic
TAGAGGAAGATCACTTCAAT+AGG 0.428981 tig0026227:+350 Msa1427860:CDS
TTGAATACATTGATGAGATA+TGG 0.441703 tig0026227:+11705 Msa1427860:CDS
CTTTCACTTTAAGGGTGGTA+TGG 0.446418 tig0026227:+293 Msa1427860:CDS
AACATTGTAGACATAGCTCT+TGG 0.450264 tig0026227:+12618 Msa1427860:CDS
AACATTGTAGACATAGCTCT+TGG 0.450264 tig0026227:+2353 Msa1427860:CDS
CTTGAAGTTTCCGGCAATTG+TGG 0.451600 tig0026227:+2202 Msa1427860:intron
CACCTTTAATTATGCTTCGA+TGG 0.459821 tig0026227:-2229 None:intergenic
TTCAATTAGAGAATTAAGAA+AGG 0.461738 tig0026227:-12793 None:intergenic
GAAAGGCCACCAACTTCTCT+TGG 0.471563 tig0026227:-12776 None:intergenic
AGATAAAACTACATGGATCT+TGG 0.472943 tig0026227:+263 Msa1427860:CDS
ATAATCATGGACTCACATAT+AGG 0.473284 tig0026227:-439 None:intergenic
GTGAAGAGCGGGAAAAGTCC+AGG 0.476986 tig0026227:+2249 Msa1427860:CDS
AATGTATTCAACAATAATCA+TGG 0.478690 tig0026227:-452 None:intergenic
AATGTATTCAACAATGATCA+TGG 0.484642 tig0026227:-11693 None:intergenic
ATGATCAGAATAAGTTCTAT+GGG 0.489286 tig0026227:+2318 Msa1427860:CDS
GAAGGCCAGAGAGAATTTAT+GGG 0.489428 tig0026227:+12527 Msa1427860:CDS
TCTTCCTCTATACTATCATA+TGG 0.496062 tig0026227:-337 None:intergenic
TCTTCCTCTATGTTCTCATA+TGG 0.502605 tig0026227:-11578 None:intergenic
CATAATTAAAGGTGAAGAGC+GGG 0.504869 tig0026227:+2238 Msa1427860:CDS
CACCCCTGACCAAGAGAAGT+TGG 0.508213 tig0026227:+12767 Msa1427860:CDS
CAAAGCATTTGTATCTTCAT+GGG 0.509542 tig0026227:+12874 Msa1427860:CDS
TCGCTCCCATAAATTCTCTC+TGG 0.520342 tig0026227:-12532 None:intergenic
CATGCACAAGCTAATTAAGA+TGG 0.520586 tig0026227:+237 None:intergenic
TTTCCATCATGAACTAGCAC+TGG 0.520703 tig0026227:-11656 None:intergenic
TTTCCATCATGAACCAGCAC+TGG 0.520744 tig0026227:-415 None:intergenic
GGATTATATTGAAGAAGTTG+AGG 0.529265 tig0026227:-376 None:intergenic
GATATGGTCACACAACTCAT+TGG 0.531719 tig0026227:+11721 Msa1427860:CDS
ATGATCATGGACTCACATAT+GGG 0.533497 tig0026227:-11680 None:intergenic
CGGGCTTGAGCTCTGTCATA+GGG 0.535527 tig0026227:-11755 None:intergenic
GCTCTGTCATATGGATCAGC+AGG 0.539671 tig0026227:-505 None:intergenic
GCTCTGTCATAGGGATCAGC+AGG 0.544103 tig0026227:-11746 None:intergenic
CATACCACCCTTAAAGTGAA+AGG 0.544844 tig0026227:-292 None:intergenic
CCACCAACTTCTCTTGGTCA+GGG 0.547093 tig0026227:-12770 None:intergenic
TCGCTCCAATAAATTATCCC+TGG 0.548240 tig0026227:-2267 None:intergenic
TTTACAGATTTCGGCAATTG+CGG 0.548298 tig0026227:+12470 Msa1427860:intron
GGTCTTAACCGCTGTTGGCA+AGG 0.552198 tig0026227:+5861 Msa1427860:CDS
ATGGCAGAGGTGAAACTACA+TGG 0.553227 tig0026227:+11497 Msa1427860:CDS
TTGTTCATCAGATGTGATTG+GGG 0.560138 tig0026227:+5839 Msa1427860:intron
GGAGCGACTCGGAGTTGTTG+AGG 0.560264 tig0026227:+2283 Msa1427860:CDS
GTATGGACCTTAAATTTGAA+AGG 0.561421 tig0026227:+11551 Msa1427860:CDS
GGAGCGACTCAGAGTTATTG+AGG 0.563356 tig0026227:+12548 Msa1427860:CDS
ACTCCAGTGCTAGTTCATGA+TGG 0.566801 tig0026227:+11653 Msa1427860:CDS
CACCAACTTCTCTTGGTCAG+GGG 0.567960 tig0026227:-12769 None:intergenic
ACTCCAGTGCTGGTTCATGA+TGG 0.570563 tig0026227:+412 Msa1427860:CDS
TAACACAACACAAGCTAGGA+TGG 0.571188 tig0026227:+11478 Msa1427860:CDS
ACCAAATACCTCTGTTTAGG+TGG 0.571738 tig0026227:-13090 None:intergenic
ATACCACCCTTAAAGTGAAA+GGG 0.572861 tig0026227:-291 None:intergenic
CTCTCTTTCCTTGCCAACAG+CGG 0.574177 tig0026227:-5869 None:intergenic
TATACCATATGATAGTATAG+AGG 0.574275 tig0026227:+333 Msa1427860:CDS
GATAATTTATTGGAGCGACT+CGG 0.578052 tig0026227:+2272 Msa1427860:CDS
AGGATAACACAACACAAGCT+AGG 0.581614 tig0026227:+11474 Msa1427860:intron
TTAAACCATAAATGCAATCG+AGG 0.585366 tig0026227:-12711 None:intergenic
ACACAAGAAGACTCCAGTGC+TGG 0.585534 tig0026227:+402 Msa1427860:CDS
GGTATGGACCCTAAATCTGA+AGG 0.586714 tig0026227:+309 Msa1427860:CDS
GGGTTATATTGAAGAAGCAG+AGG 0.607257 tig0026227:-11617 None:intergenic
TAGCCCTTTCACTTTAAGGG+TGG 0.610464 tig0026227:+288 Msa1427860:CDS
CCCTGACCAAGAGAAGTTGG+TGG 0.614205 tig0026227:+12770 Msa1427860:CDS
GGTTAAATATGTTGATGACA+TGG 0.614212 tig0026227:+543 Msa1427860:CDS
TAAACCATAAATGCAATCGA+GGG 0.618785 tig0026227:-12710 None:intergenic
ATGGCAGAGATAAAACTACA+TGG 0.623570 tig0026227:+256 Msa1427860:CDS
AATTGGTGAAGAGCGAGAGA+AGG 0.634346 tig0026227:+12509 Msa1427860:CDS
GTATGGACCCTAAATCTGAA+GGG 0.640820 tig0026227:+310 Msa1427860:CDS
TTTGTTCTCCACCTAAACAG+AGG 0.645358 tig0026227:+13082 Msa1427860:three_prime_UTR
TGAAGAGCGGGAAAAGTCCA+GGG 0.655285 tig0026227:+2250 Msa1427860:CDS
AACACAAGCTAGGATGGCAG+AGG 0.663463 tig0026227:+11484 Msa1427860:CDS
GCATAATTAAAGGTGAAGAG+CGG 0.664372 tig0026227:+2237 Msa1427860:CDS
GCAGGAAGCAATGAGTTGTG+TGG 0.667285 tig0026227:-487 None:intergenic
TGATCAGAATAAGTTCTATG+GGG 0.669740 tig0026227:+2319 Msa1427860:CDS
GATCAGAATAAGTTCTATGG+GGG 0.670673 tig0026227:+2320 Msa1427860:CDS
TATACCATATGAGAACATAG+AGG 0.675165 tig0026227:+11574 Msa1427860:CDS
TGTTCATCAGATGTGATTGG+GGG 0.698500 tig0026227:+5840 Msa1427860:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAAAAAAATATTTTTTT+TGG + tig0026227:9278-9297 Msa1427860:intron 0.0%
!!! TTAAATTATTTTATTATTTT+CGG - tig0026227:9463-9482 None:intergenic 0.0%
!!! TTTTTTTTATAATTTTTTTT+GGG - tig0026227:11261-11280 None:intergenic 0.0%
!!! ATTTTTTTTATAATTTTTTT+TGG - tig0026227:11262-11281 None:intergenic 0.0%
!! ATTCAATAATTAAACTTAAA+AGG - tig0026227:2811-2830 None:intergenic 10.0%
!! AACAAATTGTTATATATTAA+TGG - tig0026227:3976-3995 None:intergenic 10.0%
!! CATAATATGATTTAATAAAA+TGG + tig0026227:6333-6352 Msa1427860:intron 10.0%
!! TTGTAAAAAAAAAAAATCAT+TGG + tig0026227:7217-7236 Msa1427860:intron 10.0%
!! AAAATAAAATATATAAAAGG+TGG + tig0026227:10374-10393 Msa1427860:intron 10.0%
!!! AATCTTTTTTTTTTTTTAGA+AGG + tig0026227:11055-11074 Msa1427860:intron 10.0%
!!! AGGATTTAATTTAATTTTAT+AGG + tig0026227:11948-11967 Msa1427860:intron 10.0%
!!! TTTATGGTTTAATAATTTTA+AGG + tig0026227:12722-12741 Msa1427860:CDS 10.0%
!!! CATTTTGAAACAAATTTTTT+TGG - tig0026227:961-980 None:intergenic 15.0%
!! TTAAAGAAAAAATAGTACTT+TGG - tig0026227:1065-1084 None:intergenic 15.0%
!! TTTATGTTTAAAAACTTCAT+TGG - tig0026227:1319-1338 None:intergenic 15.0%
!!! CTCAATTTAAAGTTTTAAAA+AGG - tig0026227:1377-1396 None:intergenic 15.0%
!! AAAACTTTAAATTGAGTTAA+AGG + tig0026227:1408-1427 Msa1427860:intron 15.0%
!! TCTTGAATATAGTTATAAAT+AGG - tig0026227:1452-1471 None:intergenic 15.0%
!!! GACTATAACTAATATATTTT+AGG + tig0026227:1598-1617 Msa1427860:intron 15.0%
!!! ATTTTAACGTTAATACTTAT+GGG - tig0026227:1673-1692 None:intergenic 15.0%
!!! AATTTTAACGTTAATACTTA+TGG - tig0026227:1674-1693 None:intergenic 15.0%
!! TAAGTATTAACGTTAAAATT+TGG + tig0026227:1674-1693 Msa1427860:intron 15.0%
!! GAAACAAAAAAATAAGTTAA+GGG - tig0026227:1762-1781 None:intergenic 15.0%
!! ATTCAAACTAACAATAATAT+TGG + tig0026227:2172-2191 Msa1427860:intron 15.0%
!! ATTTATGGTTAATAATTTCA+AGG + tig0026227:2456-2475 Msa1427860:intron 15.0%
!!! CAATTAAATTTGTTATTTGA+CGG - tig0026227:2942-2961 None:intergenic 15.0%
!! TAACATTAAAAATGATGTTT+AGG + tig0026227:3473-3492 Msa1427860:intron 15.0%
!! TGTATATAATATAGATTCTA+CGG - tig0026227:3655-3674 None:intergenic 15.0%
!!! AGTTTTTTATTTGGAAAAAA+AGG + tig0026227:4119-4138 Msa1427860:intron 15.0%
!!! CAACATAAAATTTTTATTTC+TGG + tig0026227:4269-4288 Msa1427860:intron 15.0%
!!! TTTCTCTCTAATTTTATTTA+TGG + tig0026227:4658-4677 Msa1427860:intron 15.0%
!! TACAAATTGTTATATAGTAA+TGG - tig0026227:4821-4840 None:intergenic 15.0%
!! TCACTTAGATAAAATAAAAT+AGG + tig0026227:4901-4920 Msa1427860:intron 15.0%
!!! AACATAGAATCTTTTATTTA+TGG + tig0026227:5039-5058 Msa1427860:intron 15.0%
!!! TTTTTTGTTTGTTTTTCAAA+TGG + tig0026227:5245-5264 Msa1427860:intron 15.0%
!!! ATTGTAATTTTGTATTAACT+TGG + tig0026227:5814-5833 Msa1427860:intron 15.0%
!!! TAATTTTCATATGTTAAGAT+TGG + tig0026227:7152-7171 Msa1427860:intron 15.0%
!!! TTTATTTTTTGACAAATATG+TGG - tig0026227:7523-7542 None:intergenic 15.0%
!! TTTAGTATTCGAAAAAATAT+TGG - tig0026227:7726-7745 None:intergenic 15.0%
!! TACATTAATTATGAATCAAT+TGG + tig0026227:7898-7917 Msa1427860:intron 15.0%
!! ACATTAATTATGAATCAATT+GGG + tig0026227:7899-7918 Msa1427860:intron 15.0%
!! TAACCTAAATCAATTTAAAT+GGG - tig0026227:9093-9112 None:intergenic 15.0%
!! ATAACCTAAATCAATTTAAA+TGG - tig0026227:9094-9113 None:intergenic 15.0%
!! AATTAACAAAGATCTTTAAA+TGG - tig0026227:10596-10615 None:intergenic 15.0%
!!! GCATTATTAATTTTTCTTTT+TGG - tig0026227:10964-10983 None:intergenic 15.0%
!! AAAAGAAAAATTAATAATGC+TGG + tig0026227:10964-10983 Msa1427860:intron 15.0%
!! AAAATTAAATTAAATCCTCA+TGG - tig0026227:11946-11965 None:intergenic 15.0%
!! ATGTAATTTATCTTTATGAA+TGG + tig0026227:12168-12187 Msa1427860:intron 15.0%
!!! ATGATCAAAAGAAATTTTAT+GGG + tig0026227:12583-12602 Msa1427860:CDS 15.0%
!!! ATCTTTTATCAAATTTATTG+AGG + tig0026227:12641-12660 Msa1427860:CDS 15.0%
!! AATGTATTCAACAATAATCA+TGG - tig0026227:455-474 None:intergenic 20.0%
!! GTAACATAGTATTAATTGAA+GGG - tig0026227:1035-1054 None:intergenic 20.0%
!! TGTAACATAGTATTAATTGA+AGG - tig0026227:1036-1055 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG - tig0026227:1099-1118 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG + tig0026227:1098-1117 Msa1427860:intron 20.0%
!!! AAAAGATACTCATTTTGAAA+CGG + tig0026227:1181-1200 Msa1427860:intron 20.0%
!! ATGTAATTTATCTCTTTGAA+TGG + tig0026227:1240-1259 Msa1427860:intron 20.0%
!!! CCAATAATTTTCAATAGTAA+GGG - tig0026227:1579-1598 None:intergenic 20.0%
!!! TCCAATAATTTTCAATAGTA+AGG - tig0026227:1580-1599 None:intergenic 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG - tig0026227:1985-2004 None:intergenic 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG - tig0026227:1984-2003 None:intergenic 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG + tig0026227:1734-1753 Msa1427860:intron 20.0%
!!! ACTATTAAAAGTTTCGTTTT+GGG + tig0026227:1735-1754 Msa1427860:intron 20.0%
!! CGAAACAAAAAAATAAGTTA+AGG - tig0026227:1763-1782 None:intergenic 20.0%
!!! CTTATTTTTTTGTTTCGTTT+TGG + tig0026227:1766-1785 Msa1427860:intron 20.0%
!! AATGAATGTATTAGAGTTAA+GGG - tig0026227:1854-1873 None:intergenic 20.0%
!!! TAGTCTCTTAACTTATTTTT+TGG - tig0026227:1933-1952 None:intergenic 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG - tig0026227:1734-1753 None:intergenic 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG + tig0026227:1984-2003 Msa1427860:intron 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG + tig0026227:1985-2004 Msa1427860:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG - tig0026227:2043-2062 None:intergenic 20.0%
!! TATAGGCTTAATTAATGATT+TGG - tig0026227:2102-2121 None:intergenic 20.0%
!! TAAGATAGAAGGTAAAATAT+AGG - tig0026227:2119-2138 None:intergenic 20.0%
!! AGTAATGTTTATAAGATAGA+AGG - tig0026227:2130-2149 None:intergenic 20.0%
!!! ATCTTTTGTGAAATTTATTG+AGG + tig0026227:2376-2395 Msa1427860:CDS 20.0%
!! TATTTGTATCTTCATATCAT+GGG + tig0026227:2676-2695 Msa1427860:intron 20.0%
!! CGTCAAATAACAAATTTAAT+TGG + tig0026227:2940-2959 Msa1427860:intron 20.0%
!!! TGTTATCTTTGAGTTATTAA+AGG - tig0026227:3458-3477 None:intergenic 20.0%
!!! ATAATCCTTTGAGAAAAAAA+GGG + tig0026227:3915-3934 Msa1427860:intron 20.0%
!! TATATTAATGGTATTATTCC+AGG - tig0026227:3964-3983 None:intergenic 20.0%
!!! CAATTTGTTCTTTGTTTAAT+TGG + tig0026227:4019-4038 Msa1427860:intron 20.0%
!! TTTGTCGTAAAAAAAAAATC+AGG + tig0026227:4211-4230 Msa1427860:intron 20.0%
!! AATTGCAAAATAACTAATGT+TGG - tig0026227:4399-4418 None:intergenic 20.0%
!! TCAAATAATCGGTATTAAAT+TGG - tig0026227:4559-4578 None:intergenic 20.0%
!! ATTCCAAGTGAAAATAATAT+AGG - tig0026227:4794-4813 None:intergenic 20.0%
!! ATCCTATTTATAGTACAATT+GGG - tig0026227:5140-5159 None:intergenic 20.0%
!! TAGTGCAAGTAATAATATAT+GGG - tig0026227:5454-5473 None:intergenic 20.0%
!! TTAGTGCAAGTAATAATATA+TGG - tig0026227:5455-5474 None:intergenic 20.0%
!! TCGATTTAATGTATACATAT+AGG + tig0026227:5482-5501 Msa1427860:intron 20.0%
!! CGATTTAATGTATACATATA+GGG + tig0026227:5483-5502 Msa1427860:intron 20.0%
!! CTTTAATGTTGTAAAAAACA+CGG + tig0026227:5593-5612 Msa1427860:intron 20.0%
!! TTTAATGTTGTAAAAAACAC+GGG + tig0026227:5594-5613 Msa1427860:intron 20.0%
!! GTGAAATTATAGATAGTTAA+TGG - tig0026227:5704-5723 None:intergenic 20.0%
!! TTAACATATATATGAAACCA+AGG - tig0026227:5982-6001 None:intergenic 20.0%
!!! TATATTATAATGCTTGCTTT+TGG - tig0026227:6115-6134 None:intergenic 20.0%
!!! AGCCTTTTTTTAATTACATT+AGG - tig0026227:6359-6378 None:intergenic 20.0%
!! AAAAAAGGCTTAATACTTTA+AGG + tig0026227:6369-6388 Msa1427860:intron 20.0%
!! TGCACATAGAATTATTTAAA+TGG - tig0026227:6413-6432 None:intergenic 20.0%
!!! AAGTGAATGTTGTATTTTAA+TGG + tig0026227:6547-6566 Msa1427860:intron 20.0%
!!! ATTCAATGTATCTTTTGTTT+TGG + tig0026227:6642-6661 Msa1427860:intron 20.0%
!!! TTCAATGTATCTTTTGTTTT+GGG + tig0026227:6643-6662 Msa1427860:intron 20.0%
!! ATTCCATTTAAATAGTAGTA+AGG + tig0026227:6684-6703 Msa1427860:intron 20.0%
!!! GATTGACTTTTAAATTTTAG+CGG + tig0026227:6905-6924 Msa1427860:intron 20.0%
!! AGACTTTGTTAAATATTTCA+TGG - tig0026227:7115-7134 None:intergenic 20.0%
!! TGAAATATTTAACAAAGTCT+AGG + tig0026227:7115-7134 Msa1427860:intron 20.0%
!! GAAATATTTAACAAAGTCTA+GGG + tig0026227:7116-7135 Msa1427860:intron 20.0%
!!! TGATCATTTACTTGATTTTA+GGG - tig0026227:7954-7973 None:intergenic 20.0%
!!! TTGATCATTTACTTGATTTT+AGG - tig0026227:7955-7974 None:intergenic 20.0%
!!! CTCTAAAAAAAACACATTTA+TGG - tig0026227:8052-8071 None:intergenic 20.0%
!! AACAAGATTACATTGAATTT+AGG + tig0026227:8162-8181 Msa1427860:intron 20.0%
!!! TTTTCCTAAATATTAGTTGA+AGG + tig0026227:8551-8570 Msa1427860:intron 20.0%
!!! AAAAAATAGTGTGATAATGT+TGG + tig0026227:8694-8713 Msa1427860:intron 20.0%
!!! TTTTTTTTTTAAGATGTGCA+AGG + tig0026227:8758-8777 Msa1427860:intron 20.0%
!!! TTTTTTTTTAAGATGTGCAA+GGG + tig0026227:8759-8778 Msa1427860:intron 20.0%
!! GTAAAATGATACATATTTGA+TGG - tig0026227:8966-8985 None:intergenic 20.0%
!!! ATATGTATCATTTTACTTCA+CGG + tig0026227:8970-8989 Msa1427860:intron 20.0%
!!! TGATTTAGGTTATTAAAGTT+AGG + tig0026227:9101-9120 Msa1427860:intron 20.0%
!! GTTATAAAAATAGTCAATGA+AGG + tig0026227:9350-9369 Msa1427860:intron 20.0%
!! AAAAATAACTTTGTTACTCT+AGG - tig0026227:9752-9771 None:intergenic 20.0%
!!! ATGATTGACTTTTTTTTTTG+TGG - tig0026227:10043-10062 None:intergenic 20.0%
!!! TATTTTTAGTTTAGTACCAT+TGG + tig0026227:10503-10522 Msa1427860:intron 20.0%
!! TTCAAACAAAAAAACAAGTA+TGG - tig0026227:10642-10661 None:intergenic 20.0%
!!! TTTAGACTTTTTAACAAGTA+TGG - tig0026227:10675-10694 None:intergenic 20.0%
!! TCATATTACTACTATCATAA+AGG + tig0026227:10793-10812 Msa1427860:intron 20.0%
!!! ATTTTTTGCATATTCAGAAT+CGG - tig0026227:10874-10893 None:intergenic 20.0%
!!! TTTTTTTTTTAGAAGGATGA+AGG + tig0026227:11062-11081 Msa1427860:intron 20.0%
!! AAGAATGAAAGTTGAATTAA+CGG - tig0026227:11984-12003 None:intergenic 20.0%
!! TGAAACATTCTTAATAGTAT+AGG - tig0026227:797-816 None:intergenic 20.0%
!! CTTAATCTTAAGTTTCAAAA+AGG - tig0026227:12291-12310 None:intergenic 20.0%
!! GAAACTTAAGATTAAGTTAA+AGG + tig0026227:12295-12314 Msa1427860:intron 20.0%
!! AAATTAAGTTAAAGGATTCA+TGG + tig0026227:12334-12353 Msa1427860:intron 20.0%
!!! GATGATCAAAAGAAATTTTA+TGG + tig0026227:12582-12601 Msa1427860:CDS 20.0%
!!! TGATCAAAAGAAATTTTATG+GGG + tig0026227:12584-12603 Msa1427860:CDS 20.0%
!! TTCAATTAGAGAATTAAGAA+AGG - tig0026227:12796-12815 None:intergenic 20.0%
!! ATTCTCTAATTGAAAAATCA+AGG + tig0026227:12802-12821 Msa1427860:CDS 20.0%
!! AAATTATGGCTTATATGAAT+TGG + tig0026227:12847-12866 Msa1427860:CDS 20.0%
!!! TTCTTTTAATGTTGAAAGTA+AGG + tig0026227:12986-13005 Msa1427860:three_prime_UTR 20.0%
! TATACCATATGATAGTATAG+AGG + tig0026227:333-352 Msa1427860:CDS 25.0%
! TTGAATACATTGATGAGATA+TGG + tig0026227:464-483 Msa1427860:CDS 25.0%
!!! ACATGTTCCACTAATTTTTT+AGG + tig0026227:639-658 Msa1427860:intron 25.0%
!! AGTTTTGCCTAAAAAATTAG+TGG - tig0026227:649-668 None:intergenic 25.0%
!! ATTTAAGTTAAATGACTTCC+GGG - tig0026227:673-692 None:intergenic 25.0%
!! GATTTAAGTTAAATGACTTC+CGG - tig0026227:674-693 None:intergenic 25.0%
! GATAGATGACTAATTTGATT+TGG - tig0026227:710-729 None:intergenic 25.0%
! ATATATCATCATGTAGACAA+TGG - tig0026227:779-798 None:intergenic 25.0%
! AAACAAACCAATAGTTGATT+AGG + tig0026227:1089-1108 Msa1427860:intron 25.0%
! ACATAGATCAAAATGAAGTT+TGG + tig0026227:1286-1305 Msa1427860:intron 25.0%
!! ATAATTTTCAATAGTAAGGG+AGG - tig0026227:1576-1595 None:intergenic 25.0%
! CCCTTACTATTGAAAATTAT+TGG + tig0026227:1576-1595 Msa1427860:intron 25.0%
!! TTTAGGCTTAATTACTCTTT+TGG + tig0026227:1615-1634 Msa1427860:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - tig0026227:2075-2094 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - tig0026227:2074-2093 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + tig0026227:1646-1665 Msa1427860:intron 25.0%
! GAAACCAAAAAGTAACTTAA+GGG - tig0026227:2016-2035 None:intergenic 25.0%
!!! TGGTCTCTTAACTTATTTTT+TGG + tig0026227:1786-1805 Msa1427860:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + tig0026227:1797-1816 Msa1427860:intron 25.0%
! CGAAACCAAAAATAAGTTAA+GGG - tig0026227:1956-1975 None:intergenic 25.0%
! ACGAAACCAAAAATAAGTTA+AGG - tig0026227:1955-1974 None:intergenic 25.0%
!!! ACTTATTTTTGGTTTCGTTT+TGG + tig0026227:1827-1846 Msa1427860:intron 25.0%
! GAATGAATGTATTAGAGTTA+AGG - tig0026227:1855-1874 None:intergenic 25.0%
! ATACATTCATTCTAACGTAA+AGG + tig0026227:1863-1882 Msa1427860:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - tig0026227:1797-1816 None:intergenic 25.0%
!!! TTGGTCTCTTAACTTATTTT+TGG - tig0026227:1785-1804 None:intergenic 25.0%
! GAAACCAAAAAGTAACTTAA+GGG + tig0026227:2016-2035 Msa1427860:intron 25.0%
!! AGTTATTTGTTGGTTACATT+TGG - tig0026227:1645-1664 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + tig0026227:2074-2093 Msa1427860:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + tig0026227:2075-2094 Msa1427860:intron 25.0%
!! TTAGTTTGAATCTAGATAGA+AGG - tig0026227:2163-2182 None:intergenic 25.0%
! AATGATCAGAATAAGTTCTA+TGG + tig0026227:2317-2336 Msa1427860:CDS 25.0%
! ATGATCAGAATAAGTTCTAT+GGG + tig0026227:2318-2337 Msa1427860:CDS 25.0%
! TTATTAACCATAAATGCAAG+CGG - tig0026227:2451-2470 None:intergenic 25.0%
! GCCTCTAATTGAAAAAATAA+TGG + tig0026227:2536-2555 Msa1427860:intron 25.0%
!!! GCCATTATTTTTTCAATTAG+AGG - tig0026227:2540-2559 None:intergenic 25.0%
! GTATTTGTATCTTCATATCA+TGG + tig0026227:2675-2694 Msa1427860:intron 25.0%
! CATAATTCCTTAACATAAGT+GGG - tig0026227:3168-3187 None:intergenic 25.0%
! ACATAATTCCTTAACATAAG+TGG - tig0026227:3169-3188 None:intergenic 25.0%
! TATGAGATCATCTATAAATC+TGG + tig0026227:3347-3366 Msa1427860:intron 25.0%
! ATGAGATCATCTATAAATCT+GGG + tig0026227:3348-3367 Msa1427860:intron 25.0%
!!! ATGGTTTTAGATTAATTCCA+TGG - tig0026227:3605-3624 None:intergenic 25.0%
! TAATATAGATTCTACGGATA+AGG - tig0026227:3649-3668 None:intergenic 25.0%
!! CAATTGCAAATGTTTTACAT+TGG + tig0026227:3673-3692 Msa1427860:intron 25.0%
!!! TGAGAAGAAGCATTTAATTT+TGG - tig0026227:3699-3718 None:intergenic 25.0%
! CTACATAAGGCAATATTATA+TGG + tig0026227:3792-3811 Msa1427860:intron 25.0%
!! GATAATCCTTTGAGAAAAAA+AGG + tig0026227:3914-3933 Msa1427860:intron 25.0%
!! TTTTTCCCTTTTTTTCTCAA+AGG - tig0026227:3923-3942 None:intergenic 25.0%
! AGATAATTCACTTTAGTCTA+TGG - tig0026227:4238-4257 None:intergenic 25.0%
!! GTTAACTTTTAATCACAAAG+AGG - tig0026227:4510-4529 None:intergenic 25.0%
! CGGTATTAAATTGGTATATA+TGG - tig0026227:4550-4569 None:intergenic 25.0%
! GGTCTTAATTGTCAAATAAT+CGG - tig0026227:4570-4589 None:intergenic 25.0%
! TAAGAATCCTTATAATCCTT+TGG + tig0026227:4747-4766 Msa1427860:intron 25.0%
!! TTTTTCTCCAAAGGATTATA+AGG - tig0026227:4757-4776 None:intergenic 25.0%
!! AATCCTTTGGAGAAAAAAAA+AGG + tig0026227:4760-4779 Msa1427860:intron 25.0%
!!! TTTCCTTTTTTTTTCTCCAA+AGG - tig0026227:4766-4785 None:intergenic 25.0%
!! ACTCCTATATTATTTTCACT+TGG + tig0026227:4788-4807 Msa1427860:intron 25.0%
! AAAATAGGTCATACTAAATC+AGG + tig0026227:4916-4935 Msa1427860:intron 25.0%
!! ACCATTTTGTCGTAAAAAAA+AGG + tig0026227:4939-4958 Msa1427860:intron 25.0%
!!! TCCTTTTTTTTACGACAAAA+TGG - tig0026227:4943-4962 None:intergenic 25.0%
! GCATTTAGGAATAATACAAA+TGG + tig0026227:4991-5010 Msa1427860:intron 25.0%
!!! CTTGTCTATTGATTTTTCTA+AGG - tig0026227:5076-5095 None:intergenic 25.0%
! TTCCCAATTGTACTATAAAT+AGG + tig0026227:5135-5154 Msa1427860:intron 25.0%
! CATCCTATTTATAGTACAAT+TGG - tig0026227:5141-5160 None:intergenic 25.0%
! TTAATGTTGTAAAAAACACG+GGG + tig0026227:5595-5614 Msa1427860:intron 25.0%
! AGTGAATTATAGTAGAGATT+TGG - tig0026227:6240-6259 None:intergenic 25.0%
! AATAATTATAGCAGAGTTGT+GGG - tig0026227:6288-6307 None:intergenic 25.0%
! AAATAATTATAGCAGAGTTG+TGG - tig0026227:6289-6308 None:intergenic 25.0%
! GGCCTAATGTAATTAAAAAA+AGG + tig0026227:6354-6373 Msa1427860:intron 25.0%
!! TCTGAATGTAAAAATGGATT+TGG + tig0026227:6433-6452 Msa1427860:intron 25.0%
!! AAACTTGAGAGAATTTTCAA+CGG - tig0026227:6466-6485 None:intergenic 25.0%
! AAGCCTTACTACTATTTAAA+TGG - tig0026227:6690-6709 None:intergenic 25.0%
! TAAATTTCCTAATGTTGATG+AGG + tig0026227:6733-6752 Msa1427860:intron 25.0%
!!! TGACTTTTTTCTTCCTATTT+TGG - tig0026227:6803-6822 None:intergenic 25.0%
! TATGTGAAATATCAAGCTAA+CGG - tig0026227:6940-6959 None:intergenic 25.0%
! CTATGGATGAATACAAATTA+TGG - tig0026227:6987-7006 None:intergenic 25.0%
! ACGTAACATATAATTGACTA+TGG - tig0026227:7004-7023 None:intergenic 25.0%
! GTTGTTTACTGGTAAAAAAA+AGG - tig0026227:7184-7203 None:intergenic 25.0%
!! TTACCAGTAAACAACTATTT+TGG + tig0026227:7189-7208 Msa1427860:intron 25.0%
! AAAAATCATTGGATCCAATT+CGG + tig0026227:7228-7247 Msa1427860:intron 25.0%
! CAAAAGGAAGTTAAACAATT+AGG - tig0026227:7674-7693 None:intergenic 25.0%
!!! CTAATTGTTTAACTTCCTTT+TGG + tig0026227:7672-7691 Msa1427860:intron 25.0%
! TTATATCAACAAACTGCATT+CGG - tig0026227:8100-8119 None:intergenic 25.0%
!!! TATCTTTAGAATTGCATGTT+TGG - tig0026227:8842-8861 None:intergenic 25.0%
! TGTATCACACTAAATTTACA+TGG + tig0026227:8922-8941 Msa1427860:intron 25.0%
! GTATCACACTAAATTTACAT+GGG + tig0026227:8923-8942 Msa1427860:intron 25.0%
!! TATGTATCATTTTACTTCAC+GGG + tig0026227:8971-8990 Msa1427860:intron 25.0%
!! GTTCCCATTTAAATTGATTT+AGG + tig0026227:9087-9106 Msa1427860:intron 25.0%
! CTAATGTGTTATACATGTAA+AGG - tig0026227:9144-9163 None:intergenic 25.0%
!! ATCTAAACATGCTTTATTCA+CGG - tig0026227:9195-9214 None:intergenic 25.0%
! TAAAAATAGTCAATGAAGGT+TGG + tig0026227:9354-9373 Msa1427860:intron 25.0%
! AAGTTATACACATATCTTTG+AGG - tig0026227:9515-9534 None:intergenic 25.0%
! TGAACAAAAGACATGAATAA+AGG + tig0026227:9706-9725 Msa1427860:intron 25.0%
! TTAGATGAGTCAATATTGAT+TGG - tig0026227:9939-9958 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG + tig0026227:9995-10014 Msa1427860:intron 25.0%
! CATAATATATACAAGGTACA+GGG + tig0026227:10002-10021 Msa1427860:intron 25.0%
!!! ATTGACTTTTTTTTTTGTGG+TGG - tig0026227:10040-10059 None:intergenic 25.0%
!! TACTGTTTTACTTATCGTTT+TGG - tig0026227:10120-10139 None:intergenic 25.0%
!!! TTGACAAGACATTTTTTGTT+TGG + tig0026227:10286-10305 Msa1427860:intron 25.0%
!! TAATCACATAAACTTTGAGA+CGG - tig0026227:10405-10424 None:intergenic 25.0%
! AGAAAAATTAATAATGCTGG+TGG + tig0026227:10967-10986 Msa1427860:intron 25.0%
! GAAAAATTAATAATGCTGGT+GGG + tig0026227:10968-10987 Msa1427860:intron 25.0%
! AAAAATTAATAATGCTGGTG+GGG + tig0026227:10969-10988 Msa1427860:intron 25.0%
! AACAAAATGAAACATTTGTG+TGG + tig0026227:10992-11011 Msa1427860:intron 25.0%
! ATGAAGGAAATCTTCTTATA+TGG + tig0026227:11078-11097 Msa1427860:intron 25.0%
! ATAAAAAATGCAACGTCATA+TGG + tig0026227:11284-11303 Msa1427860:intron 25.0%
!! GTATAGTCCTTTTACTTTAA+GGG + tig0026227:11526-11545 Msa1427860:CDS 25.0%
! TGGTATACCTTTCAAATTTA+AGG - tig0026227:11561-11580 None:intergenic 25.0%
! AATGTATTCAACAATGATCA+TGG - tig0026227:11696-11715 None:intergenic 25.0%
! TTGAATACATTGATGAGATA+TGG + tig0026227:464-483 Msa1427860:CDS 25.0%
! AACATATTTAACCCAAAATC+GGG - tig0026227:536-555 None:intergenic 25.0%
! CAACATATTTAACCCAAAAT+CGG - tig0026227:537-556 None:intergenic 25.0%
!! GGTTAAATATGTTGATGAAT+TGG + tig0026227:11784-11803 Msa1427860:CDS 25.0%
! GAATGGTTAAGTATAACTTA+TGG + tig0026227:12185-12204 Msa1427860:intron 25.0%
! TTTATGTTCAAAAACGTCAA+CGG - tig0026227:12237-12256 None:intergenic 25.0%
! AATCTATAATTTACTTTCCC+TGG + tig0026227:12375-12394 Msa1427860:intron 25.0%
! GTAATAATTATAAGACACCA+GGG - tig0026227:12395-12414 None:intergenic 25.0%
! TGATTCAGACTAACAATATT+TGG + tig0026227:12440-12459 Msa1427860:intron 25.0%
! GGATCAATATTTACAGATTT+CGG + tig0026227:12461-12480 Msa1427860:intron 25.0%
!! GATCAAAAGAAATTTTATGG+GGG + tig0026227:12585-12604 Msa1427860:CDS 25.0%
! TATCAAATTTATTGAGGTTC+AGG + tig0026227:12647-12666 Msa1427860:CDS 25.0%
AGATAAAACTACATGGATCT+TGG + tig0026227:263-282 Msa1427860:CDS 30.0%
TCTTCCTCTATACTATCATA+TGG - tig0026227:340-359 None:intergenic 30.0%
GGATTATATTGAAGAAGTTG+AGG - tig0026227:379-398 None:intergenic 30.0%
ATAATCATGGACTCACATAT+AGG - tig0026227:442-461 None:intergenic 30.0%
!! GGTTAAATATGTTGATGACA+TGG + tig0026227:543-562 Msa1427860:CDS 30.0%
GAACATGTATCATGATAGAA+AGG - tig0026227:627-646 None:intergenic 30.0%
!!! ATTTTTTAGGCAAAACTACC+CGG + tig0026227:652-671 Msa1427860:intron 30.0%
AAAGTTAAGTCACTAGTGTA+AGG - tig0026227:741-760 None:intergenic 30.0%
! TCAACTAGAGTCCAATTTTA+GGG - tig0026227:827-846 None:intergenic 30.0%
! ATCAACTAGAGTCCAATTTT+AGG - tig0026227:828-847 None:intergenic 30.0%
TGATAACAAGATCACAATCT+TGG + tig0026227:844-863 Msa1427860:intron 30.0%
!! TTCAAAATGAATGTCGCTTT+CGG + tig0026227:972-991 Msa1427860:intron 30.0%
TTAGAAGTCTTACTCTTGAT+TGG - tig0026227:1475-1494 None:intergenic 30.0%
CGAAACCAAAAAGTAACTTA+AGG - tig0026227:2015-2034 None:intergenic 30.0%
!!! GTTACTTTTTGGTTTCGTTT+TGG + tig0026227:1705-1724 Msa1427860:intron 30.0%
!! TTGGTCCCTTAACTTATTTT+TGG + tig0026227:1816-1835 Msa1427860:intron 30.0%
!!! GTTACTTTTTGGTTTCGTTT+TGG - tig0026227:1705-1724 None:intergenic 30.0%
CGAAACCAAAAAGTAACTTA+AGG + tig0026227:2015-2034 Msa1427860:intron 30.0%
TTCCATCGAAGCATAATTAA+AGG + tig0026227:2227-2246 Msa1427860:CDS 30.0%
AAAGTCCAGGGATAATTTAT+TGG + tig0026227:2262-2281 Msa1427860:CDS 30.0%
TGATCAGAATAAGTTCTATG+GGG + tig0026227:2319-2338 Msa1427860:CDS 30.0%
AGCTATGTCTACAATGTTAA+TGG - tig0026227:2351-2370 None:intergenic 30.0%
TATTAACCATAAATGCAAGC+GGG - tig0026227:2450-2469 None:intergenic 30.0%
! ATGAAAAGTTCTAATACGAC+TGG + tig0026227:2605-2624 Msa1427860:intron 30.0%
GGAAATAATGGTGTGTATTA+AGG - tig0026227:2911-2930 None:intergenic 30.0%
! TGTTATTTGACGGAAATCAA+GGG - tig0026227:2932-2951 None:intergenic 30.0%
!! TTGTTATTTGACGGAAATCA+AGG - tig0026227:2933-2952 None:intergenic 30.0%
TGAGATCATCTATAAATCTG+GGG + tig0026227:3349-3368 Msa1427860:intron 30.0%
!! CATATTAATGCAAGGTATTG+TGG - tig0026227:3421-3440 None:intergenic 30.0%
TTATTAAAGGAAGTCCCAAT+GGG - tig0026227:3445-3464 None:intergenic 30.0%
GATACCGTTTAAACATGTTT+GGG + tig0026227:3517-3536 Msa1427860:intron 30.0%
ATACCGTTTAAACATGTTTG+GGG + tig0026227:3518-3537 Msa1427860:intron 30.0%
ATTGTTCATCCTTTATAGTC+AGG + tig0026227:3554-3573 Msa1427860:intron 30.0%
TGTAATCATGATATGCCAAA+TGG - tig0026227:3748-3767 None:intergenic 30.0%
TCCTTACACTAATCTACATA+AGG + tig0026227:3779-3798 Msa1427860:intron 30.0%
AAAATAGACCCTACAAAATC+AGG + tig0026227:4183-4202 Msa1427860:intron 30.0%
AAATAGACCCTACAAAATCA+GGG + tig0026227:4184-4203 Msa1427860:intron 30.0%
AGAGTAGTAGTAGTTATTGA+TGG - tig0026227:4623-4642 None:intergenic 30.0%
TATTCCTAAATGCAAATTGC+AGG - tig0026227:4984-5003 None:intergenic 30.0%
TTATAGTACAATTGGGAACA+TGG - tig0026227:5133-5152 None:intergenic 30.0%
TTTCAAAAACAGCTCAAAGA+GGG + tig0026227:5549-5568 Msa1427860:intron 30.0%
TAATGTTGTAAAAAACACGG+GGG + tig0026227:5596-5615 Msa1427860:intron 30.0%
TCTTAAAATTGTGTGATGTG+TGG - tig0026227:5631-5650 None:intergenic 30.0%
!!! AGATTAGTGTTTTGTTTCCT+TGG + tig0026227:5962-5981 Msa1427860:intron 30.0%
TGTGCATCTGAATGTAAAAA+TGG + tig0026227:6427-6446 Msa1427860:intron 30.0%
ACTTTCTCTCTCATATTTGA+TGG - tig0026227:6507-6526 None:intergenic 30.0%
! AGACTTGAGAGAATTTTCAA+TGG + tig0026227:6588-6607 Msa1427860:intron 30.0%
!!! CTTTTTTCTTCCTATTTTGG+TGG - tig0026227:6800-6819 None:intergenic 30.0%
TTAGTTGCGAGAATTATTTG+TGG + tig0026227:6867-6886 Msa1427860:intron 30.0%
ATGTTACGTTATCAAGAATG+AGG + tig0026227:7015-7034 Msa1427860:intron 30.0%
GATCCAAAATAGTTGTTTAC+TGG - tig0026227:7195-7214 None:intergenic 30.0%
GAAAAGAAAGAAAACCGAAT+TGG - tig0026227:7245-7264 None:intergenic 30.0%
! CTTTTCATCTGTATACATAG+TGG + tig0026227:7259-7278 Msa1427860:intron 30.0%
ATTTGACAATGTGTAGTATG+TGG - tig0026227:7555-7574 None:intergenic 30.0%
ACAAAGTCAATTATGCTAGT+TGG - tig0026227:8219-8238 None:intergenic 30.0%
!!! TTTTTTTTTCCTCCACTTCT+TGG + tig0026227:8243-8262 Msa1427860:intron 30.0%
GACATATGTAAAATGGTTGA+CGG - tig0026227:8314-8333 None:intergenic 30.0%
! GCGTATTGACATATGTAAAA+TGG - tig0026227:8321-8340 None:intergenic 30.0%
TCCTAAATATTAGTTGAAGG+AGG + tig0026227:8554-8573 Msa1427860:intron 30.0%
TCCTCCTTCAACTAATATTT+AGG - tig0026227:8558-8577 None:intergenic 30.0%
TATCTTGAAATTGTGCCTAA+TGG - tig0026227:8895-8914 None:intergenic 30.0%
! ATGTATCATTTTACTTCACG+GGG + tig0026227:8972-8991 Msa1427860:intron 30.0%
! TTATACACATATCTTTGAGG+TGG - tig0026227:9512-9531 None:intergenic 30.0%
GAATTAAATTACTCCCTAAG+TGG - tig0026227:9808-9827 None:intergenic 30.0%
GCATAATATATACAAGGTAC+AGG + tig0026227:10001-10020 Msa1427860:intron 30.0%
GCACACATTAAGTTTCTATA+CGG + tig0026227:10063-10082 Msa1427860:intron 30.0%
TAAGAACTCAATTACTCCAA+TGG - tig0026227:10522-10541 None:intergenic 30.0%
AAATGAAACATTTGTGTGGA+AGG + tig0026227:10996-11015 Msa1427860:intron 30.0%
! TTGAATTTGACTAGTTGACA+AGG + tig0026227:11399-11418 Msa1427860:intron 30.0%
! GGTATAGTCCTTTTACTTTA+AGG + tig0026227:11525-11544 Msa1427860:CDS 30.0%
CATACTACCCTTAAAGTAAA+AGG - tig0026227:11536-11555 None:intergenic 30.0%
!! CTTTTACTTTAAGGGTAGTA+TGG + tig0026227:11534-11553 Msa1427860:CDS 30.0%
GTATGGACCTTAAATTTGAA+AGG + tig0026227:11551-11570 Msa1427860:CDS 30.0%
TATACCATATGAGAACATAG+AGG + tig0026227:11574-11593 Msa1427860:CDS 30.0%
ATGTATTGTGCAAGTACAAT+TGG - tig0026227:11894-11913 None:intergenic 30.0%
! ACATGTTCCACTCATTTTAT+AGG + tig0026227:11910-11929 Msa1427860:intron 30.0%
AACTTTGCCTATAAAATGAG+TGG - tig0026227:11920-11939 None:intergenic 30.0%
GGTAATAATTATAAGACACC+AGG - tig0026227:12396-12415 None:intergenic 30.0%
TGAGATGGTTAGAACATATT+AGG - tig0026227:12417-12436 None:intergenic 30.0%
AGTTATTGAGGATAAGTGTT+TGG + tig0026227:12560-12579 Msa1427860:CDS 30.0%
AGCTATGTCTACAATGTTAA+TGG - tig0026227:2351-2370 None:intergenic 30.0%
TAAACCATAAATGCAATCGA+GGG - tig0026227:12713-12732 None:intergenic 30.0%
TTAAACCATAAATGCAATCG+AGG - tig0026227:12714-12733 None:intergenic 30.0%
GCATCTTCTTGAGAAAATTA+TGG + tig0026227:12833-12852 Msa1427860:CDS 30.0%
! ACAAAGCATTTGTATCTTCA+TGG + tig0026227:12873-12892 Msa1427860:CDS 30.0%
! CAAAGCATTTGTATCTTCAT+GGG + tig0026227:12874-12893 Msa1427860:CDS 30.0%
! CTTTTACTTTATTAGACGTG+TGG - tig0026227:13013-13032 None:intergenic 30.0%
AGGTGGAGAACAAAATTATA+AGG - tig0026227:13076-13095 None:intergenic 30.0%
ATGGCAGAGATAAAACTACA+TGG + tig0026227:256-275 Msa1427860:CDS 35.0%
GTATAGCCCTTTCACTTTAA+GGG + tig0026227:285-304 Msa1427860:CDS 35.0%
ATACCACCCTTAAAGTGAAA+GGG - tig0026227:294-313 None:intergenic 35.0%
TGGTATACCCTTCAGATTTA+GGG - tig0026227:320-339 None:intergenic 35.0%
ATGGTATACCCTTCAGATTT+AGG - tig0026227:321-340 None:intergenic 35.0%
TAGAGGAAGATCACTTCAAT+AGG + tig0026227:350-369 Msa1427860:CDS 35.0%
TTCACACTCAACCCTAAAAT+TGG + tig0026227:813-832 Msa1427860:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - tig0026227:935-954 None:intergenic 35.0%
TTCCTTAATCTGTGTGCAAT+TGG + tig0026227:1155-1174 Msa1427860:intron 35.0%
!!! GATACTCATTTTGAAACGGA+TGG + tig0026227:1185-1204 Msa1427860:intron 35.0%
!!! TGTTTTTTTCCATGTCAAGC+TGG - tig0026227:1345-1364 None:intergenic 35.0%
CTTTAAGCACACCAACAAAA+AGG + tig0026227:1503-1522 Msa1427860:intron 35.0%
! TGCATATGAGACCTTTTTGT+TGG - tig0026227:1517-1536 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + tig0026227:1635-1654 Msa1427860:intron 35.0%
!!! TGGTCCCTTAAGTTACTTTT+TGG + tig0026227:1694-1713 Msa1427860:intron 35.0%
!!! TGGTCCCTTAAGTTACTTTT+TGG - tig0026227:1694-1713 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - tig0026227:1635-1654 None:intergenic 35.0%
CACCTTTAATTATGCTTCGA+TGG - tig0026227:2232-2251 None:intergenic 35.0%
GCATAATTAAAGGTGAAGAG+CGG + tig0026227:2237-2256 Msa1427860:CDS 35.0%
CATAATTAAAGGTGAAGAGC+GGG + tig0026227:2238-2257 Msa1427860:CDS 35.0%
GATAATTTATTGGAGCGACT+CGG + tig0026227:2272-2291 Msa1427860:CDS 35.0%
GATCAGAATAAGTTCTATGG+GGG + tig0026227:2320-2339 Msa1427860:CDS 35.0%
AACATTGTAGACATAGCTCT+TGG + tig0026227:2353-2372 Msa1427860:CDS 35.0%
ATTAACCATAAATGCAAGCG+GGG - tig0026227:2449-2468 None:intergenic 35.0%
!!! CTCAGAGGTATTTTCTTTGA+TGG - tig0026227:2490-2509 None:intergenic 35.0%
AGAAGTTTGTGGCTTATGTA+AGG + tig0026227:2514-2533 Msa1427860:intron 35.0%
ACGGAAATCAAGGGAAATAA+TGG - tig0026227:2923-2942 None:intergenic 35.0%
ATTCCGATTGAACAACAGTT+TGG + tig0026227:3050-3069 Msa1427860:intron 35.0%
GATCCAAACTGTTGTTCAAT+CGG - tig0026227:3056-3075 None:intergenic 35.0%
AAATGCACCCACTTATGTTA+AGG + tig0026227:3158-3177 Msa1427860:intron 35.0%
GGAATTATGTGTCATCACAT+TGG + tig0026227:3179-3198 Msa1427860:intron 35.0%
! CATCACATTGGTAGTAAGAA+TGG + tig0026227:3191-3210 Msa1427860:intron 35.0%
! TTGGTAGTAAGAATGGAGAA+TGG + tig0026227:3198-3217 Msa1427860:intron 35.0%
AATCTGCTTGACCAAGTTAT+TGG + tig0026227:3316-3335 Msa1427860:intron 35.0%
ATCTGCTTGACCAAGTTATT+GGG + tig0026227:3317-3336 Msa1427860:intron 35.0%
!! ATAAGAGTACCCCAATAACT+TGG - tig0026227:3330-3349 None:intergenic 35.0%
TTGCATTAATATGCCCCATT+GGG + tig0026227:3428-3447 Msa1427860:intron 35.0%
TATTAAAGGAAGTCCCAATG+GGG - tig0026227:3444-3463 None:intergenic 35.0%
GTTATTAAAGGAAGTCCCAA+TGG - tig0026227:3446-3465 None:intergenic 35.0%
GGATACCGTTTAAACATGTT+TGG + tig0026227:3516-3535 Msa1427860:intron 35.0%
TCACCCCAAACATGTTTAAA+CGG - tig0026227:3524-3543 None:intergenic 35.0%
GCCTTATGTAGATTAGTGTA+AGG - tig0026227:3783-3802 None:intergenic 35.0%
!!! GACTCTTTTTTCATATGTGC+AGG - tig0026227:4061-4080 None:intergenic 35.0%
AATAGACCCTACAAAATCAG+GGG + tig0026227:4185-4204 Msa1427860:intron 35.0%
! AAAATGCCCCTGATTTTGTA+GGG - tig0026227:4194-4213 None:intergenic 35.0%
! CCTGTCTCTTGATTTTTCTA+AGG - tig0026227:4306-4325 None:intergenic 35.0%
CCTTAGAAAAATCAAGAGAC+AGG + tig0026227:4303-4322 Msa1427860:intron 35.0%
TTTGTTTGACGCTATAGTCA+AGG - tig0026227:4595-4614 None:intergenic 35.0%
GACTATAGCGTCAAACAAAA+TGG + tig0026227:4596-4615 Msa1427860:intron 35.0%
GAAACCTGCAATTTGCATTT+AGG + tig0026227:4977-4996 Msa1427860:intron 35.0%
GAGACAGAAAAAAGATGTGA+TGG - tig0026227:5180-5199 None:intergenic 35.0%
TACTGAAAAAGCCCACAATT+TGG + tig0026227:5293-5312 Msa1427860:intron 35.0%
CATGGTTAACACCAAATTGT+GGG - tig0026227:5307-5326 None:intergenic 35.0%
TCATGGTTAACACCAAATTG+TGG - tig0026227:5308-5327 None:intergenic 35.0%
!! ACAATTTGGTGTTAACCATG+AGG + tig0026227:5307-5326 Msa1427860:intron 35.0%
!! CAATTTGGTGTTAACCATGA+GGG + tig0026227:5308-5327 Msa1427860:intron 35.0%
CCTATAAATCAGTGTCTTCT+TGG - tig0026227:5529-5548 None:intergenic 35.0%
!! CCAAGAAGACACTGATTTAT+AGG + tig0026227:5526-5545 Msa1427860:intron 35.0%
GTTTCAAAAACAGCTCAAAG+AGG + tig0026227:5548-5567 Msa1427860:intron 35.0%
AAGTTTGAGAGAGCTGATAA+TGG + tig0026227:5671-5690 Msa1427860:intron 35.0%
CCATCTTCAAATATATCAGC+AGG - tig0026227:5731-5750 None:intergenic 35.0%
CCTGCTGATATATTTGAAGA+TGG + tig0026227:5728-5747 Msa1427860:intron 35.0%
TTTGACCGTGACTATTTAGT+CGG + tig0026227:5752-5771 Msa1427860:intron 35.0%
ACTAACCGACTAAATAGTCA+CGG - tig0026227:5760-5779 None:intergenic 35.0%
TGTTGTTCATCAGATGTGAT+TGG + tig0026227:5837-5856 Msa1427860:intron 35.0%
GTTGTTCATCAGATGTGATT+GGG + tig0026227:5838-5857 Msa1427860:intron 35.0%
TTGTTCATCAGATGTGATTG+GGG + tig0026227:5839-5858 Msa1427860:intron 35.0%
CAATGTTCCTCATCAACATT+AGG - tig0026227:6743-6762 None:intergenic 35.0%
! TGATGAGGAACATTGATTGA+TGG + tig0026227:6748-6767 Msa1427860:intron 35.0%
CAATATCATAAGACCCTTTC+TGG - tig0026227:7042-7061 None:intergenic 35.0%
!! GTTTAACTTCCTTTTGGTGA+TGG + tig0026227:7678-7697 Msa1427860:intron 35.0%
ATACTTGAACCATCACCAAA+AGG - tig0026227:7690-7709 None:intergenic 35.0%
ATTATGCTAGTTGGATGAGA+AGG - tig0026227:8210-8229 None:intergenic 35.0%
TTAAAACTCCATCCAAGAAG+TGG - tig0026227:8258-8277 None:intergenic 35.0%
! GTGATAATGTTGGAACAACA+AGG + tig0026227:8704-8723 Msa1427860:intron 35.0%
! TGTTTGGTGGATAAATCTCT+TGG - tig0026227:8826-8845 None:intergenic 35.0%
!! CTTTAGAATTGCATGTTTGG+TGG - tig0026227:8839-8858 None:intergenic 35.0%
!! AAACTTAGCTCTGAAGTTAG+TGG + tig0026227:8868-8887 Msa1427860:intron 35.0%
CACACTAAATTTACATGGGT+TGG + tig0026227:8927-8946 Msa1427860:intron 35.0%
!! TCAATGAAGGTTGGCTTATT+TGG + tig0026227:9363-9382 Msa1427860:intron 35.0%
AAGTTGAACACACGACTTAA+CGG - tig0026227:9405-9424 None:intergenic 35.0%
CAGAGACAAAGAGGTAATTA+CGG - tig0026227:9437-9456 None:intergenic 35.0%
! TAACAAAGTTGACTCCACTT+AGG + tig0026227:9791-9810 Msa1427860:intron 35.0%
! AACAAAGTTGACTCCACTTA+GGG + tig0026227:9792-9811 Msa1427860:intron 35.0%
! GATGAGTCAATATTGATTGG+AGG - tig0026227:9936-9955 None:intergenic 35.0%
!!! ACTTTTTTTTTTGTGGTGGC+CGG - tig0026227:10036-10055 None:intergenic 35.0%
TTGTTTGGTAAACAATACCG+TGG + tig0026227:10301-10320 Msa1427860:intron 35.0%
GTGGATCACCATCTATAAAA+AGG + tig0026227:11437-11456 Msa1427860:intron 35.0%
TCACCATCTATAAAAAGGAC+TGG + tig0026227:11442-11461 Msa1427860:intron 35.0%
! ACACCAGTCCTTTTTATAGA+TGG - tig0026227:11448-11467 None:intergenic 35.0%
! ATCTATAAAAAGGACTGGTG+TGG + tig0026227:11447-11466 Msa1427860:intron 35.0%
! TCTATAAAAAGGACTGGTGT+GGG + tig0026227:11448-11467 Msa1427860:intron 35.0%
! AGGTGAAACTACATGGATTT+TGG + tig0026227:11504-11523 Msa1427860:CDS 35.0%
TCTTCCTCTATGTTCTCATA+TGG - tig0026227:11581-11600 None:intergenic 35.0%
! CTGGAGTTTTCTTGTGTATT+GGG - tig0026227:11640-11659 None:intergenic 35.0%
! ACTGGAGTTTTCTTGTGTAT+TGG - tig0026227:11641-11660 None:intergenic 35.0%
ATGATCATGGACTCACATAT+GGG - tig0026227:11683-11702 None:intergenic 35.0%
AATGATCATGGACTCACATA+TGG - tig0026227:11684-11703 None:intergenic 35.0%
CAATTGGATTATGATCACGA+TGG - tig0026227:11878-11897 None:intergenic 35.0%
!!! CATCTTTTTTCGTGTCAAGT+TGG - tig0026227:12263-12282 None:intergenic 35.0%
TAGTCTGAATCAAGATGAGA+TGG - tig0026227:12432-12451 None:intergenic 35.0%
TTTACAGATTTCGGCAATTG+CGG + tig0026227:12470-12489 Msa1427860:intron 35.0%
!! CTTCACCAATTTTGCTATAG+AGG - tig0026227:12500-12519 None:intergenic 35.0%
AACATTGTAGACATAGCTCT+TGG + tig0026227:2353-2372 Msa1427860:CDS 35.0%
TTGAAAAATCAAGGCAGTCA+AGG + tig0026227:12811-12830 Msa1427860:CDS 35.0%
TAGCTGCTTAATGTTGTCTT+TGG + tig0026227:12931-12950 Msa1427860:exon 35.0%
TGTACCAAATACCTCTGTTT+AGG - tig0026227:13096-13115 None:intergenic 35.0%
GGTATAGCCCTTTCACTTTA+AGG + tig0026227:284-303 Msa1427860:CDS 40.0%
CATACCACCCTTAAAGTGAA+AGG - tig0026227:295-314 None:intergenic 40.0%
! CTTTCACTTTAAGGGTGGTA+TGG + tig0026227:293-312 Msa1427860:CDS 40.0%
GTATGGACCCTAAATCTGAA+GGG + tig0026227:310-329 Msa1427860:CDS 40.0%
ACTGGAGTCTTCTTGTGTAT+TGG - tig0026227:400-419 None:intergenic 40.0%
! ACAGAGCTCAAGCAAGATTT+TGG + tig0026227:521-540 Msa1427860:CDS 40.0%
! CAGAGCTCAAGCAAGATTTT+GGG + tig0026227:522-541 Msa1427860:CDS 40.0%
AGCCAATTGCACACAGATTA+AGG - tig0026227:1160-1179 None:intergenic 40.0%
CATAAATGACCAGCTTGACA+TGG + tig0026227:1333-1352 Msa1427860:intron 40.0%
TCTAACGTAAAGGACCAAAG+TGG + tig0026227:1873-1892 Msa1427860:intron 40.0%
TAAAGGACCAAAGTGGTTGA+CGG + tig0026227:1880-1899 Msa1427860:intron 40.0%
GGATCAATGCTTGAAGTTTC+CGG + tig0026227:2193-2212 Msa1427860:intron 40.0%
TCGCTCCAATAAATTATCCC+TGG - tig0026227:2270-2289 None:intergenic 40.0%
TTAACCATAAATGCAAGCGG+GGG - tig0026227:2448-2467 None:intergenic 40.0%
!! GAGGTATTTTCTTTGATGGC+TGG - tig0026227:2486-2505 None:intergenic 40.0%
! TCACGACTTAGAAGTCTTGT+CGG + tig0026227:3074-3093 Msa1427860:intron 40.0%
GTAGTAAGAATGGAGAATGG+AGG + tig0026227:3201-3220 Msa1427860:intron 40.0%
GAATGGAGGTCTTACCTATT+AGG + tig0026227:3215-3234 Msa1427860:intron 40.0%
AGATTTATTGCTCCGGAGTT+TGG - tig0026227:3301-3320 None:intergenic 40.0%
GTCAAGCAGATTTATTGCTC+CGG - tig0026227:3308-3327 None:intergenic 40.0%
TCTGCTTGACCAAGTTATTG+GGG + tig0026227:3318-3337 Msa1427860:intron 40.0%
ATGAACACGAGACAAAGCAT+CGG - tig0026227:3392-3411 None:intergenic 40.0%
CAATGGGGCATATTAATGCA+AGG - tig0026227:3429-3448 None:intergenic 40.0%
CTTGCATTAATATGCCCCAT+TGG + tig0026227:3427-3446 Msa1427860:intron 40.0%
!! ATCCATTTTTGTGTCGCAGT+TGG - tig0026227:3500-3519 None:intergenic 40.0%
CCACTTGAACCTGACTATAA+AGG - tig0026227:3566-3585 None:intergenic 40.0%
CCTTTATAGTCAGGTTCAAG+TGG + tig0026227:3563-3582 Msa1427860:intron 40.0%
ACAGTTGGGTTACAAAAGGA+TGG - tig0026227:3624-3643 None:intergenic 40.0%
GGATACAGTTGGGTTACAAA+AGG - tig0026227:3628-3647 None:intergenic 40.0%
CTACGGATAAGGATACAGTT+GGG - tig0026227:3638-3657 None:intergenic 40.0%
TCTACGGATAAGGATACAGT+TGG - tig0026227:3639-3658 None:intergenic 40.0%
AAATGGCACAATTGCACATG+TGG - tig0026227:3731-3750 None:intergenic 40.0%
! ACATGTGCAATTGTGCCATT+TGG + tig0026227:3730-3749 Msa1427860:intron 40.0%
TCCAGGCGATAAAAACATAG+AGG - tig0026227:3947-3966 None:intergenic 40.0%
! CAAAATGCCCCTGATTTTGT+AGG - tig0026227:4195-4214 None:intergenic 40.0%
CACAAAGAGGACTAAAACCA+CGG - tig0026227:4497-4516 None:intergenic 40.0%
TTTGACGCTATAGTCAAGGA+TGG - tig0026227:4591-4610 None:intergenic 40.0%
TTCAGTAACATCGGAGATCA+AGG - tig0026227:5280-5299 None:intergenic 40.0%
!!! GTGGGCTTTTTCAGTAACAT+CGG - tig0026227:5289-5308 None:intergenic 40.0%
CAAAACCAACTCGAGTGATT+GGG - tig0026227:5379-5398 None:intergenic 40.0%
TGTTCATCAGATGTGATTGG+GGG + tig0026227:5840-5859 Msa1427860:intron 40.0%
! CAAGGAAAGAGAGTATGTCA+AGG + tig0026227:5879-5898 Msa1427860:intron 40.0%
! GAAAGAGAGTATGTCAAGGA+TGG + tig0026227:5883-5902 Msa1427860:intron 40.0%
TCATTGAGCTCGACAACAAT+GGG + tig0026227:5926-5945 Msa1427860:intron 40.0%
AGACTCTATGCCACCAAAAT+AGG + tig0026227:6787-6806 Msa1427860:intron 40.0%
! TTTGTGGTGTCAAGTGAATC+AGG + tig0026227:6883-6902 Msa1427860:intron 40.0%
ATCAAGAATGAGGTCCAGAA+AGG + tig0026227:7025-7044 Msa1427860:intron 40.0%
TCAAGAATGAGGTCCAGAAA+GGG + tig0026227:7026-7045 Msa1427860:intron 40.0%
!! CTATGGTACGTTTCTAGCAA+GGG + tig0026227:7292-7311 Msa1427860:intron 40.0%
!! TATGGTACGTTTCTAGCAAG+GGG + tig0026227:7293-7312 Msa1427860:intron 40.0%
! TTTTTCCTCCACTTCTTGGA+TGG + tig0026227:8247-8266 Msa1427860:intron 40.0%
CGGCGACATGTATTTAGAAA+GGG - tig0026227:8294-8313 None:intergenic 40.0%
ACGGCGACATGTATTTAGAA+AGG - tig0026227:8295-8314 None:intergenic 40.0%
! TCTGAAGTTAGTGGACCATT+AGG + tig0026227:8877-8896 Msa1427860:intron 40.0%
AGTTGAACACACGACTTAAC+GGG - tig0026227:9404-9423 None:intergenic 40.0%
CGTAATTACCTCTTTGTCTC+TGG + tig0026227:9435-9454 Msa1427860:intron 40.0%
AGCAAAATATTTCCCGTGCA+AGG + tig0026227:9628-9647 Msa1427860:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+TGG + tig0026227:9973-9992 Msa1427860:intron 40.0%
!!! TTTTTTTTTTGTGGTGGCCG+GGG - tig0026227:10034-10053 None:intergenic 40.0%
!!! CTTTTTTTTTTGTGGTGGCC+GGG - tig0026227:10035-10054 None:intergenic 40.0%
TTTGGTAAACAATACCGTGG+AGG + tig0026227:10304-10323 Msa1427860:intron 40.0%
TTGGTAAACAATACCGTGGA+GGG + tig0026227:10305-10324 Msa1427860:intron 40.0%
!!! GGTTTTAAGGGAAGGACATT+AGG - tig0026227:10331-10350 None:intergenic 40.0%
!! ATTTTAATCGTGAGACCCGT+CGG - tig0026227:10352-10371 None:intergenic 40.0%
!! TCACATAAACTTTGAGACGG+TGG - tig0026227:10402-10421 None:intergenic 40.0%
GAAACGTTGACGAAGATTGA+AGG + tig0026227:11031-11050 Msa1427860:intron 40.0%
TGATCCACCATGGAGTTATT+TGG - tig0026227:11425-11444 None:intergenic 40.0%
TTATAGATGGTGATCCACCA+TGG - tig0026227:11435-11454 None:intergenic 40.0%
AGGATAACACAACACAAGCT+AGG + tig0026227:11474-11493 Msa1427860:intron 40.0%
TAACACAACACAAGCTAGGA+TGG + tig0026227:11478-11497 Msa1427860:CDS 40.0%
GGGTTATATTGAAGAAGCAG+AGG - tig0026227:11620-11639 None:intergenic 40.0%
TTTCCATCATGAACTAGCAC+TGG - tig0026227:11659-11678 None:intergenic 40.0%
GATATGGTCACACAACTCAT+TGG + tig0026227:11721-11740 Msa1427860:CDS 40.0%
ATAGGCAAAGTTACACCATG+AGG + tig0026227:11928-11947 Msa1427860:intron 40.0%
GCACTCCTCTATAGCAAAAT+TGG + tig0026227:12492-12511 Msa1427860:CDS 40.0%
AGAAGGCCAGAGAGAATTTA+TGG + tig0026227:12526-12545 Msa1427860:CDS 40.0%
GAAGGCCAGAGAGAATTTAT+GGG + tig0026227:12527-12546 Msa1427860:CDS 40.0%
GATTCCCTCGATTGCATTTA+TGG + tig0026227:12706-12725 Msa1427860:CDS 40.0%
!!! AGGGGTGTTTTCTTTGATGA+CGG - tig0026227:12754-12773 None:intergenic 40.0%
TTTGTTCTCCACCTAAACAG+AGG + tig0026227:13082-13101 Msa1427860:three_prime_UTR 40.0%
!! TCCACCTAAACAGAGGTATT+TGG + tig0026227:13089-13108 Msa1427860:three_prime_UTR 40.0%
ACCAAATACCTCTGTTTAGG+TGG - tig0026227:13093-13112 None:intergenic 40.0%
! TAGCCCTTTCACTTTAAGGG+TGG + tig0026227:288-307 Msa1427860:CDS 45.0%
GGTATGGACCCTAAATCTGA+AGG + tig0026227:309-328 Msa1427860:CDS 45.0%
TTTCCATCATGAACCAGCAC+TGG - tig0026227:418-437 None:intergenic 45.0%
CTTGCTTGAGCTCTGTCATA+TGG - tig0026227:517-536 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - tig0026227:932-951 None:intergenic 45.0%
TGTTGGTGTGCTTAAAGCGA+AGG - tig0026227:1500-1519 None:intergenic 45.0%
GTTGACGGAGGAAGAGTTAA+GGG + tig0026227:1895-1914 Msa1427860:intron 45.0%
CTTGAAGTTTCCGGCAATTG+TGG + tig0026227:2202-2221 Msa1427860:intron 45.0%
CACAAACTTCTCTTGCTCAG+AGG - tig0026227:2505-2524 None:intergenic 45.0%
CTCTGAGCAAGAGAAGTTTG+TGG + tig0026227:2503-2522 Msa1427860:intron 45.0%
!! AGTCTTGTCGGTTCGTTCTT+CGG + tig0026227:3086-3105 Msa1427860:intron 45.0%
GTGGGTGCATTTAGCATCTT+TGG - tig0026227:3150-3169 None:intergenic 45.0%
! GCAAACTGTGTTGATCCGTA+TGG - tig0026227:3256-3275 None:intergenic 45.0%
GGATTACTTGGGTCATGAGT+TGG - tig0026227:3280-3299 None:intergenic 45.0%
GACCCAAGTAATCCAAACTC+CGG + tig0026227:3286-3305 Msa1427860:intron 45.0%
CTCCGGAGTTTGGATTACTT+GGG - tig0026227:3291-3310 None:intergenic 45.0%
GTCCAACTGCGACACAAAAA+TGG + tig0026227:3495-3514 Msa1427860:intron 45.0%
! AAACATGTTTGGGGTGAGTC+TGG + tig0026227:3527-3546 Msa1427860:intron 45.0%
GCTGAATGACTATGTCTCCA+TGG + tig0026227:3585-3604 Msa1427860:intron 45.0%
GCACAATTGCACATGTGGAT+AGG - tig0026227:3726-3745 None:intergenic 45.0%
!! GCCTCTATGTTTTTATCGCC+TGG + tig0026227:3943-3962 Msa1427860:intron 45.0%
CCACGGTATACTATTGTCTC+AGG - tig0026227:4480-4499 None:intergenic 45.0%
CCTGAGACAATAGTATACCG+TGG + tig0026227:4477-4496 Msa1427860:intron 45.0%
!! ATCGGAGATCAAGGCGTTTT+TGG - tig0026227:5271-5290 None:intergenic 45.0%
! TTCTGAGGATTCGAGAACTC+AGG - tig0026227:5354-5373 None:intergenic 45.0%
TCGAGTGATTGGGATTTCTG+AGG - tig0026227:5369-5388 None:intergenic 45.0%
GAAATCCCAATCACTCGAGT+TGG + tig0026227:5371-5390 Msa1427860:intron 45.0%
GCAAAACCAACTCGAGTGAT+TGG - tig0026227:5380-5399 None:intergenic 45.0%
!!! GTTGGTTTTGCAAGATCGTG+AGG + tig0026227:5389-5408 Msa1427860:intron 45.0%
GTCATTGAGCTCGACAACAA+TGG + tig0026227:5925-5944 Msa1427860:intron 45.0%
! AGAGTTGTGGGTTGAACGTT+GGG - tig0026227:6276-6295 None:intergenic 45.0%
!! ATAGTGGTGTCATGCTCCTA+TGG + tig0026227:7275-7294 Msa1427860:intron 45.0%
CCTTGCTAGAAACGTACCAT+AGG - tig0026227:7294-7313 None:intergenic 45.0%
!! CCTATGGTACGTTTCTAGCA+AGG + tig0026227:7291-7310 Msa1427860:intron 45.0%
AAACTCCATCCAAGAAGTGG+AGG - tig0026227:8255-8274 None:intergenic 45.0%
TTTCGGTTCCAGAGACAAAG+AGG - tig0026227:9446-9465 None:intergenic 45.0%
AATATTTCCCGTGCAAGGCA+CGG + tig0026227:9633-9652 Msa1427860:intron 45.0%
CAACGTGAGCTTAACTCAGT+TGG + tig0026227:9968-9987 Msa1427860:intron 45.0%
TGTCCTTCCCTTAAAACCGA+CGG + tig0026227:10333-10352 Msa1427860:intron 45.0%
GACAAGGCCAAATAACTCCA+TGG + tig0026227:11415-11434 Msa1427860:intron 45.0%
AAGGCCAAATAACTCCATGG+TGG + tig0026227:11418-11437 Msa1427860:intron 45.0%
! AAAAGGACTGGTGTGGGTTT+AGG + tig0026227:11454-11473 Msa1427860:intron 45.0%
ATGGCAGAGGTGAAACTACA+TGG + tig0026227:11497-11516 Msa1427860:CDS 45.0%
ACTCCAGTGCTAGTTCATGA+TGG + tig0026227:11653-11672 Msa1427860:CDS 45.0%
AATTGGTGAAGAGCGAGAGA+AGG + tig0026227:12509-12528 Msa1427860:CDS 45.0%
TCGCTCCCATAAATTCTCTC+TGG - tig0026227:12535-12554 None:intergenic 45.0%
!! GGGGTGTTTTCTTTGATGAC+GGG - tig0026227:12753-12772 None:intergenic 45.0%
!!! AAAACAAATTTTTAATATAT+GGG - tig0026227:1552-1571 None:intergenic 5.0%
!!! TAAAACAAATTTTTAATATA+TGG - tig0026227:1553-1572 None:intergenic 5.0%
!! TTAATTATTGAATTTAAAAA+AGG + tig0026227:2818-2837 Msa1427860:intron 5.0%
!!! AAAATAATTAGTTTTTTATT+TGG + tig0026227:4110-4129 Msa1427860:intron 5.0%
!!! ATTAATGTATATATTTTTTT+AGG - tig0026227:7887-7906 None:intergenic 5.0%
!!! TAAGATAAAATATTTTTTTA+TGG - tig0026227:10182-10201 None:intergenic 5.0%
!! TAGAAAATAAAATATATAAA+AGG + tig0026227:10371-10390 Msa1427860:intron 5.0%
!! ATAAAAAAAAATTAAGTTAA+AGG + tig0026227:12326-12345 Msa1427860:intron 5.0%
ACACAAGAAGACTCCAGTGC+TGG + tig0026227:402-421 Msa1427860:CDS 50.0%
!! ACTCCAGTGCTGGTTCATGA+TGG + tig0026227:412-431 Msa1427860:CDS 50.0%
GCAGGAAGCAATGAGTTGTG+TGG - tig0026227:490-509 None:intergenic 50.0%
GCTCTGTCATATGGATCAGC+AGG - tig0026227:508-527 None:intergenic 50.0%
TCTTCCTCCGTCAACCACTT+TGG - tig0026227:1890-1909 None:intergenic 50.0%
GGTTGACGGAGGAAGAGTTA+AGG + tig0026227:1894-1913 Msa1427860:intron 50.0%
TGAAGAGCGGGAAAAGTCCA+GGG + tig0026227:2250-2269 Msa1427860:CDS 50.0%
GATTCCCCCGCTTGCATTTA+TGG + tig0026227:2441-2460 Msa1427860:intron 50.0%
ACGACATACATCGTCGTTGG+TGG - tig0026227:2644-2663 None:intergenic 50.0%
GAGACGACATACATCGTCGT+TGG - tig0026227:2647-2666 None:intergenic 50.0%
TCACGAGTTAGCGGCCTAAT+AGG - tig0026227:3232-3251 None:intergenic 50.0%
CCGTATGGATCACGAGTTAG+CGG - tig0026227:3241-3260 None:intergenic 50.0%
CCGCTAACTCGTGATCCATA+CGG + tig0026227:3238-3257 Msa1427860:intron 50.0%
GCTCCGGAGTTTGGATTACT+TGG - tig0026227:3292-3311 None:intergenic 50.0%
CCACATTCTCACAACCCTCA+TGG - tig0026227:5325-5344 None:intergenic 50.0%
CCATGAGGGTTGTGAGAATG+TGG + tig0026227:5322-5341 Msa1427860:intron 50.0%
CTCTCTTTCCTTGCCAACAG+CGG - tig0026227:5872-5891 None:intergenic 50.0%
! CAGAGTTGTGGGTTGAACGT+TGG - tig0026227:6277-6296 None:intergenic 50.0%
ATATTTCCCGTGCAAGGCAC+GGG + tig0026227:9634-9653 Msa1427860:intron 50.0%
ATTGAAACCCGTGCCTTGCA+CGG - tig0026227:9644-9663 None:intergenic 50.0%
GTCCTTCCCTTAAAACCGAC+GGG + tig0026227:10334-10353 Msa1427860:intron 50.0%
!!! GTGAGACCCGTCGGTTTTAA+GGG - tig0026227:10343-10362 None:intergenic 50.0%
GTCAACGTTTCATGCGTGCA+TGG - tig0026227:11022-11041 None:intergenic 50.0%
AACACAAGCTAGGATGGCAG+AGG + tig0026227:11484-11503 Msa1427860:CDS 50.0%
! ACAGAGCTCAAGCCCGATTT+TGG + tig0026227:11762-11781 Msa1427860:CDS 50.0%
! CAGAGCTCAAGCCCGATTTT+GGG + tig0026227:11763-11782 Msa1427860:CDS 50.0%
GGAGCGACTCAGAGTTATTG+AGG + tig0026227:12548-12567 Msa1427860:CDS 50.0%
CACCAACTTCTCTTGGTCAG+GGG - tig0026227:12772-12791 None:intergenic 50.0%
CCACCAACTTCTCTTGGTCA+GGG - tig0026227:12773-12792 None:intergenic 50.0%
GAAAGGCCACCAACTTCTCT+TGG - tig0026227:12779-12798 None:intergenic 50.0%
AGGACCAAAGTGGTTGACGG+AGG + tig0026227:1883-1902 Msa1427860:intron 55.0%
CGATGGAACGCCACAATTGC+CGG - tig0026227:2215-2234 None:intergenic 55.0%
GTGAAGAGCGGGAAAAGTCC+AGG + tig0026227:2249-2268 Msa1427860:CDS 55.0%
GGATTCGAGAACTCAGGCAC+AGG - tig0026227:5348-5367 None:intergenic 55.0%
TTGGGGGTCTTAACCGCTGT+TGG + tig0026227:5856-5875 Msa1427860:CDS 55.0%
GGTCTTAACCGCTGTTGGCA+AGG + tig0026227:5861-5880 Msa1427860:CDS 55.0%
TTGAAACCCGTGCCTTGCAC+GGG - tig0026227:9643-9662 None:intergenic 55.0%
GAAGGACATTAGGCCCTCCA+CGG - tig0026227:10321-10340 None:intergenic 55.0%
!!! GACCCGTCGGTTTTAAGGGA+AGG - tig0026227:10339-10358 None:intergenic 55.0%
!!! CGTGAGACCCGTCGGTTTTA+AGG - tig0026227:10344-10363 None:intergenic 55.0%
GCTCTGTCATAGGGATCAGC+AGG - tig0026227:11749-11768 None:intergenic 55.0%
CGGGCTTGAGCTCTGTCATA+GGG - tig0026227:11758-11777 None:intergenic 55.0%
TCGGGCTTGAGCTCTGTCAT+AGG - tig0026227:11759-11778 None:intergenic 55.0%
CACCCCTGACCAAGAGAAGT+TGG + tig0026227:12767-12786 Msa1427860:CDS 55.0%
CCCTGACCAAGAGAAGTTGG+TGG + tig0026227:12770-12789 Msa1427860:CDS 55.0%
GCCACCAACTTCTCTTGGTC+AGG - tig0026227:12774-12793 None:intergenic 55.0%
! GGAGCGACTCGGAGTTGTTG+AGG + tig0026227:2283-2302 Msa1427860:CDS 60.0%
AAGGTACAGGGTTCGAGCCC+CGG + tig0026227:10014-10033 Msa1427860:intron 60.0%
Chromosome Type Strat End Strand Name
tig0026227 gene 238 13145 238 ID=Msa1427860;Name=Msa1427860
tig0026227 mRNA 238 13145 238 ID=Msa1427860-mRNA-1;Parent=Msa1427860;Name=Msa1427860-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.25|0.2|0.8|0.5|0.4|5|204|462
tig0026227 exon 238 564 238 ID=Msa1427860-mRNA-1:exon:5673;Parent=Msa1427860-mRNA-1
tig0026227 exon 2209 2434 2209 ID=Msa1427860-mRNA-1:exon:5674;Parent=Msa1427860-mRNA-1
tig0026227 exon 5850 5890 5850 ID=Msa1427860-mRNA-1:exon:5675;Parent=Msa1427860-mRNA-1
tig0026227 exon 11476 11805 11476 ID=Msa1427860-mRNA-1:exon:5676;Parent=Msa1427860-mRNA-1
tig0026227 exon 12477 13145 12477 ID=Msa1427860-mRNA-1:exon:5677;Parent=Msa1427860-mRNA-1
tig0026227 CDS 238 564 238 ID=Msa1427860-mRNA-1:cds;Parent=Msa1427860-mRNA-1
tig0026227 CDS 2209 2434 2209 ID=Msa1427860-mRNA-1:cds;Parent=Msa1427860-mRNA-1
tig0026227 CDS 5850 5890 5850 ID=Msa1427860-mRNA-1:cds;Parent=Msa1427860-mRNA-1
tig0026227 CDS 11476 11805 11476 ID=Msa1427860-mRNA-1:cds;Parent=Msa1427860-mRNA-1
tig0026227 CDS 12477 12941 12477 ID=Msa1427860-mRNA-1:cds;Parent=Msa1427860-mRNA-1
tig0026227 three_prime_UTR 12942 13145 12942 ID=Msa1427860-mRNA-1:three_prime_utr;Parent=Msa1427860-mRNA-1
Gene Sequence

>Msa1427860

ATGCACAAGCTAATTAAGATGGCAGAGATAAAACTACATGGATCTTGGTATAGCCCTTTCACTTTAAGGGTGGTATGGACCCTAAATCTGAAGGGTATACCATATGATAGTATAGAGGAAGATCACTTCAATAGGACTCCTCAACTTCTTCAATATAATCCAATACACAAGAAGACTCCAGTGCTGGTTCATGATGGAAAACCTATATGTGAGTCCATGATTATTGTTGAATACATTGATGAGATATGGCCACACAACTCATTGCTTCCTGCTGATCCATATGACAGAGCTCAAGCAAGATTTTGGGTTAAATATGTTGATGACATGTTTCCGGCAATTGTGGCGTTCCATCGAAGCATAATTAAAGGTGAAGAGCGGGAAAAGTCCAGGGATAATTTATTGGAGCGACTCGGAGTTGTTGAGGATCAGTGCTTGAATGATCAGAATAAGTTCTATGGGGGAGAAACCATTAACATTGTAGACATAGCTCTTGGATCTTTTGTGAAATTTATTGAGGTTCAAGAAGATATGTTTGAAGTGAAGATCTTCAAAAATGTGATTGGGGGTCTTAACCGCTGTTGGCAAGGAAAGAGAGATAACACAACACAAGCTAGGATGGCAGAGGTGAAACTACATGGATTTTGGTATAGTCCTTTTACTTTAAGGGTAGTATGGACCTTAAATTTGAAAGGTATACCATATGAGAACATAGAGGAAGATCGCTTCAATAAAAGTCCTCTGCTTCTTCAATATAACCCAATACACAAGAAAACTCCAGTGCTAGTTCATGATGGAAAACCCATATGTGAGTCCATGATCATTGTTGAATACATTGATGAGATATGGTCACACAACTCATTGGTTCCTGCTGATCCCTATGACAGAGCTCAAGCCCGATTTTGGGTTAAATATGTTGATGAATTGATTTCGGCAATTGCGGCACTCCTCTATAGCAAAATTGGTGAAGAGCGAGAGAAGGCCAGAGAGAATTTATGGGAGCGACTCAGAGTTATTGAGGATAAGTGTTTGGATGATCAAAAGAAATTTTATGGGGGAGACACCATTAACATTGTAGACATAGCTCTTGGATCTTTTATCAAATTTATTGAGGTTCAGGAAGATATGTTTGAAGTGAAGATCTTGCAAAGTGAGAGATTCCCTCGATTGCATTTATGGTTTAATAATTTTAAGGATGTTCCCGTCATCAAAGAAAACACCCCTGACCAAGAGAAGTTGGTGGCCTTTCTTAATTCTCTAATTGAAAAATCAAGGCAGTCAAGGCATCTTCTTGAGAAAATTATGGCTTATATGAATTGGTATACAAAGCATTTGTATCTTCATGGGTCATCTTATCATGTGCATTTCTTGATGTTACTAGTAGCTGCTTAA
Protein sequence

>Msa1427860

MHKLIKMAEIKLHGSWYSPFTLRVVWTLNLKGIPYDSIEEDHFNRTPQLLQYNPIHKKTPVLVHDGKPICESMIIVEYIDEIWPHNSLLPADPYDRAQARFWVKYVDDMFPAIVAFHRSIIKGEEREKSRDNLLERLGVVEDQCLNDQNKFYGGETINIVDIALGSFVKFIEVQEDMFEVKIFKNVIGGLNRCWQGKRDNTTQARMAEVKLHGFWYSPFTLRVVWTLNLKGIPYENIEEDRFNKSPLLLQYNPIHKKTPVLVHDGKPICESMIIVEYIDEIWSHNSLVPADPYDRAQARFWVKYVDELISAIAALLYSKIGEEREKARENLWERLRVIEDKCLDDQKKFYGGDTINIVDIALGSFIKFIEVQEDMFEVKILQSERFPRLHLWFNNFKDVPVIKENTPDQEKLVAFLNSLIEKSRQSRHLLEKIMAYMNWYTKHLYLHGSSYHVHFLMLLVAA*