Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108450 | XP_003623288.1 | 92.063 | 504 | 13 | 4 | 1 | 478 | 1 | 503 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108450 | G7KS85 | 92.063 | 504 | 13 | 4 | 1 | 478 | 1 | 503 | 0.0 | 887 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1108440 | Msa1108450 | 0.988494 | 3.082983e-174 | -8.615850e-47 |
| Msa1108450 | Msa1152220 | 0.990757 | 3.567330e-184 | -8.615850e-47 |
| Msa1108450 | Msa1170240 | 0.991916 | 2.955123e-190 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108450 | MtrunA17_Chr7g0242211 | 92.063 | 504 | 13 | 4 | 1 | 478 | 1 | 503 | 0.0 | 887 |
| Msa1108450 | MtrunA17_Chr3g0113271 | 44.881 | 586 | 202 | 17 | 5 | 475 | 32 | 611 | 5.24e-121 | 367 |
| Msa1108450 | MtrunA17_Chr5g0436961 | 43.783 | 571 | 215 | 19 | 6 | 478 | 38 | 600 | 1.26e-109 | 337 |
| Msa1108450 | MtrunA17_Chr3g0122841 | 31.590 | 478 | 243 | 17 | 1 | 459 | 30 | 442 | 7.45e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108450 | AT2G40070.1 | 45.455 | 572 | 209 | 17 | 2 | 477 | 27 | 591 | 1.11e-113 | 348 |
| Msa1108450 | AT2G40070.2 | 45.161 | 558 | 203 | 18 | 16 | 477 | 1 | 551 | 3.12e-104 | 322 |
| Msa1108450 | AT2G40070.3 | 52.083 | 336 | 141 | 10 | 161 | 477 | 140 | 474 | 1.46e-80 | 258 |
| Msa1108450 | AT3G09000.1 | 41.636 | 538 | 238 | 17 | 1 | 478 | 1 | 522 | 1.28e-78 | 255 |
| Msa1108450 | AT5G01280.1 | 37.966 | 295 | 133 | 12 | 163 | 434 | 183 | 450 | 6.41e-30 | 122 |
| Msa1108450 | AT5G01280.3 | 37.966 | 295 | 133 | 12 | 163 | 434 | 159 | 426 | 7.48e-30 | 122 |
| Msa1108450 | AT1G27850.1 | 30.361 | 471 | 216 | 19 | 1 | 443 | 30 | 416 | 1.39e-25 | 111 |
| Msa1108450 | AT5G01280.2 | 35.955 | 267 | 122 | 11 | 163 | 407 | 159 | 398 | 1.35e-20 | 94.0 |
| Msa1108450 | AT2G38160.5 | 51.899 | 79 | 26 | 1 | 345 | 423 | 149 | 215 | 1.24e-18 | 85.1 |
| Msa1108450 | AT2G38160.4 | 51.899 | 79 | 26 | 1 | 345 | 423 | 146 | 212 | 1.25e-18 | 85.1 |
| Msa1108450 | AT2G38160.2 | 51.899 | 79 | 26 | 1 | 345 | 423 | 237 | 303 | 5.88e-18 | 85.1 |
| Msa1108450 | AT2G38160.2 | 37.097 | 186 | 86 | 7 | 1 | 182 | 5 | 163 | 1.52e-16 | 80.9 |
| Msa1108450 | AT2G38160.1 | 51.899 | 79 | 26 | 1 | 345 | 423 | 237 | 303 | 5.88e-18 | 85.1 |
| Msa1108450 | AT2G38160.1 | 37.097 | 186 | 86 | 7 | 1 | 182 | 5 | 163 | 1.52e-16 | 80.9 |
| Msa1108450 | AT2G38160.3 | 51.899 | 79 | 26 | 1 | 345 | 423 | 243 | 309 | 6.90e-18 | 85.1 |
| Msa1108450 | AT2G38160.3 | 37.186 | 199 | 90 | 7 | 1 | 181 | 5 | 186 | 3.25e-16 | 80.1 |
| Msa1108450 | AT2G38160.6 | 51.899 | 79 | 26 | 1 | 345 | 423 | 243 | 309 | 6.90e-18 | 85.1 |
| Msa1108450 | AT2G38160.6 | 37.186 | 199 | 90 | 7 | 1 | 181 | 5 | 186 | 3.25e-16 | 80.1 |
| Msa1108450 | AT3G08670.1 | 33.582 | 268 | 136 | 10 | 144 | 410 | 226 | 452 | 8.40e-15 | 77.4 |
Find 130 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGTGATTTCTTCAAATT+TGG | 0.131377 | 7_3:+51354008 | None:intergenic |
| GTGACTGAAGCCGGTCTTTC+TGG | 0.168874 | 7_3:+51353987 | None:intergenic |
| TTCTTGAACCAGGTTCTATT+TGG | 0.244805 | 7_3:+51354537 | None:intergenic |
| TCTTCAACCACAGTCTTCTT+TGG | 0.262105 | 7_3:+51356186 | None:intergenic |
| TCTGCCAACAACAATTCTTA+TGG | 0.262117 | 7_3:-51353702 | Msa1108450:CDS |
| GTACCACAAACAAGCTTATA+TGG | 0.264734 | 7_3:+51352598 | None:intergenic |
| GCTGATCTTTGAGATGTCTT+AGG | 0.272627 | 7_3:+51354224 | None:intergenic |
| GGACATAAGGCGAAGCGTTC+AGG | 0.277796 | 7_3:-51353006 | Msa1108450:CDS |
| AATAACAACTCCATATCTTA+TGG | 0.299251 | 7_3:-51352840 | Msa1108450:CDS |
| GAAGAAAGCCCTGTTGTAAT+TGG | 0.303424 | 7_3:-51353789 | Msa1108450:CDS |
| GAATGATGATTGATGAATAT+TGG | 0.313653 | 7_3:+51356816 | None:intergenic |
| CATGCATCAATGTCAAGTTT+TGG | 0.314903 | 7_3:-51354494 | Msa1108450:CDS |
| TTCAAAGAAGTCTTTAGATA+TGG | 0.326090 | 7_3:-51353640 | Msa1108450:CDS |
| CGGCTTCAGTCACTAGAAAT+AGG | 0.331374 | 7_3:-51353977 | Msa1108450:CDS |
| AATTCTCTTACTGCCATTAG+TGG | 0.332131 | 7_3:+51354466 | None:intergenic |
| GGTGTTGATGATCGAATATT+AGG | 0.367903 | 7_3:+51354197 | None:intergenic |
| CTACCATTAGCACATTTACT+TGG | 0.384068 | 7_3:+51352677 | None:intergenic |
| AAGATGGTTTATTAATCATC+AGG | 0.390441 | 7_3:-51352789 | Msa1108450:three_prime_UTR |
| AATCTCACTTCCATAAGATA+TGG | 0.392247 | 7_3:+51352830 | None:intergenic |
| TCAACACCATCGAGGACATT+TGG | 0.396460 | 7_3:-51354182 | Msa1108450:CDS |
| CTCGAGGATTTCGTTGTTGA+AGG | 0.402723 | 7_3:+51354377 | None:intergenic |
| ACCGGATTCTTAGCAACAAC+AGG | 0.405466 | 7_3:+51354113 | None:intergenic |
| TATGTGAAACTTTGTCTTGT+TGG | 0.414526 | 7_3:+51356871 | None:intergenic |
| TCTTATGGAAAATCTTCAAC+TGG | 0.414898 | 7_3:-51353687 | Msa1108450:CDS |
| GGCACAAATAGCACAGATAT+TGG | 0.417669 | 7_3:-51352707 | Msa1108450:three_prime_UTR |
| ATCACATTTCAACTCATTGA+AGG | 0.424742 | 7_3:-51356675 | Msa1108450:intron |
| AAATCTTCAACTGGTAGCTC+TGG | 0.425500 | 7_3:-51353678 | Msa1108450:CDS |
| TCAACCACAGTCTTCTTTGG+TGG | 0.427459 | 7_3:+51356189 | None:intergenic |
| GCAGAAGGGTCGTTATGCTT+TGG | 0.428335 | 7_3:+51353720 | None:intergenic |
| TCAAGATCTTCAACTCCATC+TGG | 0.428365 | 7_3:-51354413 | Msa1108450:CDS |
| GGTGTTGAGGCCCTCGAAGC+GGG | 0.447411 | 7_3:+51354272 | None:intergenic |
| CCCTGTTGTTGCTAAGAATC+CGG | 0.447882 | 7_3:-51354114 | Msa1108450:intron |
| GAACTTGATTTGTCCAACTT+AGG | 0.455464 | 7_3:-51356344 | Msa1108450:intron |
| AAGAAAGCCCTGTTGTAATT+GGG | 0.456329 | 7_3:-51353788 | Msa1108450:CDS |
| TTTCTCTTATGCAGGACATA+AGG | 0.458600 | 7_3:-51353019 | Msa1108450:intron |
| CTAGCAATACTAAATCTAGA+AGG | 0.459081 | 7_3:-51353914 | Msa1108450:CDS |
| TCGAAAGGACGTGCTTCAGC+CGG | 0.461987 | 7_3:-51353876 | Msa1108450:CDS |
| ATCAGTAAAATCTAGACCTT+GGG | 0.464025 | 7_3:-51354069 | Msa1108450:CDS |
| AGAGAAGGTAATGGTGATGA+AGG | 0.465683 | 7_3:-51356459 | Msa1108450:exon |
| AGTGATTTCTTCAAATTTGG+AGG | 0.472587 | 7_3:+51354011 | None:intergenic |
| AAACTCTATGATTTCAAAGA+TGG | 0.474261 | 7_3:-51356223 | Msa1108450:CDS |
| TTCGTTGTTGAAGGTAATGT+TGG | 0.480614 | 7_3:+51354386 | None:intergenic |
| TGTGTTTCCTTGTCTAAAGT+AGG | 0.481105 | 7_3:+51354954 | None:intergenic |
| AAACCATATAAGCTTGTTTG+TGG | 0.485337 | 7_3:-51352601 | Msa1108450:three_prime_UTR |
| TGGGAACCCTCACAAATGCC+TGG | 0.487952 | 7_3:-51354050 | Msa1108450:CDS |
| GAAATCACTGCCAGAAAGAC+CGG | 0.488516 | 7_3:-51353997 | Msa1108450:CDS |
| GTTGAAGATCTTGAAGTAGC+TGG | 0.488757 | 7_3:+51354422 | None:intergenic |
| AGATATGGCAATGAGGCATA+TGG | 0.489004 | 7_3:-51353625 | Msa1108450:intron |
| CTCCCACTAGACCCGCTTCG+AGG | 0.490759 | 7_3:-51354283 | Msa1108450:CDS |
| GATCTTGAACTCGGAACTCC+AGG | 0.491055 | 7_3:+51353954 | None:intergenic |
| GGGCCTCAACACCTACTTCA+AGG | 0.493592 | 7_3:-51354262 | Msa1108450:CDS |
| CTTTGTTCCTTGAGATGAGG+AGG | 0.496371 | 7_3:-51356418 | Msa1108450:CDS |
| TAAGAATTGTTGTTGGCAGA+AGG | 0.499126 | 7_3:+51353705 | None:intergenic |
| GGCATTTGTGAGGGTTCCCA+AGG | 0.499483 | 7_3:+51354053 | None:intergenic |
| CATCAGTAAAATCTAGACCT+TGG | 0.501265 | 7_3:-51354070 | Msa1108450:CDS |
| AAATGTGATGAAATAAATGA+TGG | 0.505033 | 7_3:+51356689 | None:intergenic |
| CGAAAGGACGTGCTTCAGCC+GGG | 0.507353 | 7_3:-51353875 | Msa1108450:intron |
| TTGCTTTGTTCCTTGAGATG+AGG | 0.511091 | 7_3:-51356421 | Msa1108450:CDS |
| GTCTCCGTTTCACTCTTCAA+TGG | 0.512150 | 7_3:+51354927 | None:intergenic |
| TCTATGTACAGTGTGAGATC+AGG | 0.512316 | 7_3:-51352945 | Msa1108450:CDS |
| TGGCATTCAAATGTTTGAAA+CGG | 0.512396 | 7_3:+51356891 | None:intergenic |
| TCCCACTAGACCCGCTTCGA+GGG | 0.513001 | 7_3:-51354282 | Msa1108450:CDS |
| ATGATAAGTCTGATTATGAA+TGG | 0.516982 | 7_3:-51356146 | Msa1108450:intron |
| GTGCTAGATAGAGAAGGTAA+TGG | 0.517431 | 7_3:-51356468 | Msa1108450:exon |
| GGCCCGCGAGGTAGGTGTAG+AGG | 0.519439 | 7_3:+51354352 | None:intergenic |
| GCAGTGCTGCTTGTGGCATG+TGG | 0.519683 | 7_3:+51352882 | None:intergenic |
| TAAGAGAATTTCTTCGTCAA+GGG | 0.521003 | 7_3:-51354453 | Msa1108450:CDS |
| ATACCAAGTAAATGTGCTAA+TGG | 0.525081 | 7_3:-51352680 | Msa1108450:three_prime_UTR |
| CAGGTAGTTCATCTAAGAGC+AGG | 0.527623 | 7_3:-51352926 | Msa1108450:CDS |
| TCAACTGGTAGCTCTGGATT+CGG | 0.527784 | 7_3:-51353672 | Msa1108450:CDS |
| AGTAGAGCTCGTTTCACCGA+TGG | 0.531330 | 7_3:-51353816 | Msa1108450:CDS |
| TCTCTCTCCTCCTCATCTCA+AGG | 0.534681 | 7_3:+51356411 | None:intergenic |
| GAAGGGTCGTTATGCTTTGG+TGG | 0.538364 | 7_3:+51353723 | None:intergenic |
| GTAAGAGAATTTCTTCGTCA+AGG | 0.539407 | 7_3:-51354454 | Msa1108450:CDS |
| AGATGTCTTAGGAGCTGTCA+AGG | 0.549310 | 7_3:+51354235 | None:intergenic |
| AATCATCAGGACTCATATGA+TGG | 0.550432 | 7_3:-51352776 | Msa1108450:three_prime_UTR |
| GCTTGTGGCATGTGGCGAAT+CGG | 0.550591 | 7_3:+51352890 | None:intergenic |
| AAGAATTGTTGTTGGCAGAA+GGG | 0.552747 | 7_3:+51353706 | None:intergenic |
| ACTACATTGCTTCTTGAACC+AGG | 0.554242 | 7_3:+51354527 | None:intergenic |
| CTATTTCTAGTGACTGAAGC+CGG | 0.554548 | 7_3:+51353978 | None:intergenic |
| GATCTTGAAGTAGCTGGAGA+TGG | 0.559705 | 7_3:+51354428 | None:intergenic |
| TCAGTCACTAGAAATAGGCC+TGG | 0.563266 | 7_3:-51353972 | Msa1108450:CDS |
| GGAGCGTCATGAGTAAATCC+AGG | 0.565846 | 7_3:+51354032 | None:intergenic |
| GCTGACGAAGGTCGAGTAGG+AGG | 0.567753 | 7_3:+51354149 | None:intergenic |
| GTTAACGTGGCCCGCGAGGT+AGG | 0.568830 | 7_3:+51354344 | None:intergenic |
| GGTAATGTTGGCCTTCCAGA+TGG | 0.569687 | 7_3:+51354398 | None:intergenic |
| AGGGCTTTCTTCATCACCAT+CGG | 0.572486 | 7_3:+51353800 | None:intergenic |
| AGAGCTAGCAGTGCTGCTTG+TGG | 0.573611 | 7_3:+51352875 | None:intergenic |
| GCTGAAGCACGTCCTTTCGA+AGG | 0.575844 | 7_3:+51353879 | None:intergenic |
| GTGGGAGTTGATGATCTCAC+TGG | 0.580848 | 7_3:+51354299 | None:intergenic |
| GTCTTAGGAGCTGTCAAGGA+AGG | 0.581857 | 7_3:+51354239 | None:intergenic |
| TATGCTAGTGTTGGATAGAG+AGG | 0.583161 | 7_3:+51356747 | None:intergenic |
| AAAGTTCATAAAATGTCTCA+AGG | 0.590036 | 7_3:+51352632 | None:intergenic |
| ATGAAGAACTATGCTAGTGT+TGG | 0.590964 | 7_3:+51356738 | None:intergenic |
| AAGAGAATTTCTTCGTCAAG+GGG | 0.598036 | 7_3:-51354452 | Msa1108450:CDS |
| TTCAAGATCAGCTTCTGTTG+AGG | 0.600510 | 7_3:-51353940 | Msa1108450:CDS |
| GATAATATCCAAATAGAACC+TGG | 0.606440 | 7_3:-51354545 | Msa1108450:CDS |
| GGATAGAGAGGTGAATAACA+AGG | 0.607076 | 7_3:+51356759 | None:intergenic |
| GTCAAGGAAGGCCTTGAAGT+AGG | 0.613064 | 7_3:+51354251 | None:intergenic |
| AGTAAATCCAGGCATTTGTG+AGG | 0.616022 | 7_3:+51354043 | None:intergenic |
| CAGGACTCATATGATGGTCA+AGG | 0.616126 | 7_3:-51352770 | Msa1108450:three_prime_UTR |
| ACACTGTACATAGACGAAGC+TGG | 0.618965 | 7_3:+51352954 | None:intergenic |
| TAGAAGGTGCTAGATAGAGA+AGG | 0.622452 | 7_3:-51356474 | Msa1108450:five_prime_UTR |
| GATGCTGACGAAGGTCGAGT+AGG | 0.625399 | 7_3:+51354146 | None:intergenic |
| GATCTTCAACTCCATCTGGA+AGG | 0.627133 | 7_3:-51354409 | Msa1108450:CDS |
| TTTACTTCTTCAAAACTCTG+AGG | 0.627906 | 7_3:-51356366 | Msa1108450:CDS |
| CAGTCCAACACACCTTCGAA+AGG | 0.628165 | 7_3:-51353891 | Msa1108450:CDS |
| GTAAATCCAGGCATTTGTGA+GGG | 0.628865 | 7_3:+51354044 | None:intergenic |
| GCTGGAATGCTTGTCACGTG+TGG | 0.629743 | 7_3:+51352972 | None:intergenic |
| ACGTCCTTTCGAAGGTGTGT+TGG | 0.630372 | 7_3:+51353887 | None:intergenic |
| GATACTCCAAATGTCCTCGA+TGG | 0.633320 | 7_3:+51354176 | None:intergenic |
| AATGTGATGAAATAAATGAT+GGG | 0.635056 | 7_3:+51356690 | None:intergenic |
| GGCCCTCTACACCTACCTCG+CGG | 0.638423 | 7_3:-51354355 | Msa1108450:CDS |
| AAGAATCCGGTGCAGTCACG+TGG | 0.640150 | 7_3:-51354101 | Msa1108450:intron |
| ACAGAAGCTGATCTTGAACT+CGG | 0.650028 | 7_3:+51353945 | None:intergenic |
| AGGCCTTGAAGTAGGTGTTG+AGG | 0.654755 | 7_3:+51354259 | None:intergenic |
| GGAGTTGATGATCTCACTGG+TGG | 0.658546 | 7_3:+51354302 | None:intergenic |
| AGGTGTTGAGGCCCTCGAAG+CGG | 0.665966 | 7_3:+51354271 | None:intergenic |
| AGTTCCACCAAAGAAGACTG+TGG | 0.671508 | 7_3:-51356193 | Msa1108450:CDS |
| ATGTGATGAAATAAATGATG+GGG | 0.684317 | 7_3:+51356691 | None:intergenic |
| CCGGATTCTTAGCAACAACA+GGG | 0.684742 | 7_3:+51354114 | None:intergenic |
| AGTCTTTAGATATGGCAATG+AGG | 0.692928 | 7_3:-51353632 | Msa1108450:CDS |
| TGATGAATATTGGTTTGACA+AGG | 0.705101 | 7_3:+51356826 | None:intergenic |
| AGAAGTTAACGTGGCCCGCG+AGG | 0.710789 | 7_3:+51354340 | None:intergenic |
| TGACTTCGTAGAAGTTAACG+TGG | 0.714018 | 7_3:+51354331 | None:intergenic |
| GGTAGGTGTAGAGGGCCTCG+AGG | 0.716428 | 7_3:+51354361 | None:intergenic |
| TTCGATCATCAACACCATCG+AGG | 0.723170 | 7_3:-51354190 | Msa1108450:CDS |
| GAAGCGTTCAGGGTAATATG+CGG | 0.727762 | 7_3:-51352995 | Msa1108450:CDS |
| TGAATAACAAGGTAGCTGAG+TGG | 0.742956 | 7_3:+51356770 | None:intergenic |
| CTTCAACAACGAAATCCTCG+AGG | 0.762249 | 7_3:-51354376 | Msa1108450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAATATATATTGATC+TGG | - | chr7_3:51354177-51354196 | Msa1108450:CDS | 10.0% |
| !! | GATAAATAATTGATGTTAAA+TGG | - | chr7_3:51353979-51353998 | Msa1108450:CDS | 15.0% |
| !! | AATATTTATGGCATTATATA+TGG | - | chr7_3:51354245-51354264 | Msa1108450:CDS | 15.0% |
| !! | AATTAAGATTCAGTTAATAA+GGG | - | chr7_3:51354734-51354753 | Msa1108450:intron | 15.0% |
| !! | AATGTGATGAAATAAATGAT+GGG | + | chr7_3:51352770-51352789 | None:intergenic | 20.0% |
| !! | AAATGTGATGAAATAAATGA+TGG | + | chr7_3:51352771-51352790 | None:intergenic | 20.0% |
| !! | AAAATTGTGACTTTAGTAAT+TGG | - | chr7_3:51352900-51352919 | Msa1108450:CDS | 20.0% |
| !! | TGTTATAGTTAATGATGTTA+TGG | - | chr7_3:51353176-51353195 | Msa1108450:intron | 20.0% |
| !! | TATAGATCTTGTAAATCAAT+TGG | - | chr7_3:51353374-51353393 | Msa1108450:intron | 20.0% |
| !! | TGAAAACAGAAAATCAAAAT+AGG | + | chr7_3:51353451-51353470 | None:intergenic | 20.0% |
| !! | AAGTGAAAACAAAAGTAAAA+AGG | - | chr7_3:51353647-51353666 | Msa1108450:CDS | 20.0% |
| !! | AGTGAAAACAAAAGTAAAAA+GGG | - | chr7_3:51353648-51353667 | Msa1108450:CDS | 20.0% |
| !! | TTTCTATGTATAATTTGATG+TGG | - | chr7_3:51353719-51353738 | Msa1108450:CDS | 20.0% |
| !!! | TTTTCAGCTATTTCAAATTT+GGG | + | chr7_3:51353868-51353887 | None:intergenic | 20.0% |
| !!! | CAAAGTTGATTATGAATTTA+TGG | - | chr7_3:51354045-51354064 | Msa1108450:CDS | 20.0% |
| !! | AGAAACAAGTTCAATATTTA+TGG | - | chr7_3:51354233-51354252 | Msa1108450:CDS | 20.0% |
| !! | CATTTATGTATTATGCAATT+TGG | + | chr7_3:51354325-51354344 | None:intergenic | 20.0% |
| !! | GAATTAAGATTCAGTTAATA+AGG | - | chr7_3:51354733-51354752 | Msa1108450:intron | 20.0% |
| !! | ATAAAAGAAATGAATGTAGA+AGG | + | chr7_3:51354810-51354829 | None:intergenic | 20.0% |
| !! | TTAACGAGTATAATCTATTT+AGG | - | chr7_3:51355918-51355937 | Msa1108450:intron | 20.0% |
| !! | TAACGAGTATAATCTATTTA+GGG | - | chr7_3:51355919-51355938 | Msa1108450:intron | 20.0% |
| !!! | TTTTTTCATATGCTTAAACT+TGG | - | chr7_3:51355953-51355972 | Msa1108450:intron | 20.0% |
| !!! | AGAAAATGATTTTTAGAAGA+TGG | - | chr7_3:51356652-51356671 | Msa1108450:intron | 20.0% |
| !!! | TTTGCTATTTTATTTGTATG+TGG | - | chr7_3:51356726-51356745 | Msa1108450:five_prime_UTR | 20.0% |
| ! | GAATGATGATTGATGAATAT+TGG | + | chr7_3:51352644-51352663 | None:intergenic | 25.0% |
| !! | GTTTTTGTTCGATAATTTTG+AGG | + | chr7_3:51352666-51352685 | None:intergenic | 25.0% |
| ! | ATGTGATGAAATAAATGATG+GGG | + | chr7_3:51352769-51352788 | None:intergenic | 25.0% |
| !!! | GTTCTTTGTTTTTGCTTAAA+GGG | - | chr7_3:51352922-51352941 | Msa1108450:CDS | 25.0% |
| !!! | TTTGTTTTGTTGATCATAGA+AGG | - | chr7_3:51352967-51352986 | Msa1108450:CDS | 25.0% |
| ! | AAACAAAAAGTTACCTAAGT+TGG | + | chr7_3:51353129-51353148 | None:intergenic | 25.0% |
| !! | AATCATAGAGTTTTCATGAT+TGG | + | chr7_3:51353227-51353246 | None:intergenic | 25.0% |
| ! | AAACTCTATGATTTCAAAGA+TGG | - | chr7_3:51353234-51353253 | Msa1108450:intron | 25.0% |
| ! | ATGATAAGTCTGATTATGAA+TGG | - | chr7_3:51353311-51353330 | Msa1108450:intron | 25.0% |
| !! | CTGATTATGAATGGTAATTT+TGG | - | chr7_3:51353320-51353339 | Msa1108450:intron | 25.0% |
| ! | CAATAAATAGAAGAATGTGT+TGG | + | chr7_3:51353503-51353522 | None:intergenic | 25.0% |
| ! | AAATTTCCACTAAATCATGA+AGG | - | chr7_3:51353534-51353553 | Msa1108450:intron | 25.0% |
| ! | AGAAATTCTTATTGTCTAGT+TGG | - | chr7_3:51353743-51353762 | Msa1108450:CDS | 25.0% |
| !!! | CTTTTCAGCTATTTCAAATT+TGG | + | chr7_3:51353869-51353888 | None:intergenic | 25.0% |
| !!! | GTTTTGATAATGACAATTTG+AGG | - | chr7_3:51353898-51353917 | Msa1108450:CDS | 25.0% |
| !!! | TTGGTTATTTTTAGCATGAA+AGG | + | chr7_3:51354306-51354325 | None:intergenic | 25.0% |
| !! | TTTTCCATAAGAATTGTTGT+TGG | + | chr7_3:51355762-51355781 | None:intergenic | 25.0% |
| ! | TTCAAAGAAGTCTTTAGATA+TGG | - | chr7_3:51355817-51355836 | Msa1108450:intron | 25.0% |
| !!! | AGTTATTTCTATGCTCTATA+TGG | - | chr7_3:51356012-51356031 | Msa1108450:intron | 25.0% |
| ! | TAGTAATTTAGAGAACAAGT+AGG | + | chr7_3:51356068-51356087 | None:intergenic | 25.0% |
| ! | TCTCTAAATTACTAGAATGA+TGG | - | chr7_3:51356074-51356093 | Msa1108450:intron | 25.0% |
| ! | GAGTAAAAGATAGAATAGAA+AGG | - | chr7_3:51356126-51356145 | Msa1108450:intron | 25.0% |
| !!! | GTAACTTGTTTACTATGAAA+AGG | + | chr7_3:51356405-51356424 | None:intergenic | 25.0% |
| ! | AATAACAACTCCATATCTTA+TGG | - | chr7_3:51356617-51356636 | Msa1108450:intron | 25.0% |
| ! | AAGATGGTTTATTAATCATC+AGG | - | chr7_3:51356668-51356687 | Msa1108450:intron | 25.0% |
| ! | AAAGTTCATAAAATGTCTCA+AGG | + | chr7_3:51356828-51356847 | None:intergenic | 25.0% |
| !!! | CATTTTATGAACTTTGTTGT+AGG | - | chr7_3:51356833-51356852 | Msa1108450:five_prime_UTR | 25.0% |
| TGGCATTCAAATGTTTGAAA+CGG | + | chr7_3:51352569-51352588 | None:intergenic | 30.0% | |
| TATGTGAAACTTTGTCTTGT+TGG | + | chr7_3:51352589-51352608 | None:intergenic | 30.0% | |
| !! | TGATGAATATTGGTTTGACA+AGG | + | chr7_3:51352634-51352653 | None:intergenic | 30.0% |
| ATCACATTTCAACTCATTGA+AGG | - | chr7_3:51352782-51352801 | Msa1108450:three_prime_UTR | 30.0% | |
| TGAAGCAAGATTGTTCAAAA+GGG | + | chr7_3:51352841-51352860 | None:intergenic | 30.0% | |
| ATGAAGCAAGATTGTTCAAA+AGG | + | chr7_3:51352842-51352861 | None:intergenic | 30.0% | |
| ! | TTTTGAACAATCTTGCTTCA+TGG | - | chr7_3:51352841-51352860 | Msa1108450:CDS | 30.0% |
| !!! | GGTTCTTTGTTTTTGCTTAA+AGG | - | chr7_3:51352921-51352940 | Msa1108450:CDS | 30.0% |
| !!! | CAGAGTTTTGAAGAAGTAAA+AGG | + | chr7_3:51353091-51353110 | None:intergenic | 30.0% |
| TTTACTTCTTCAAAACTCTG+AGG | - | chr7_3:51353091-51353110 | Msa1108450:intron | 30.0% | |
| TGAAATTTATGGGACCTATA+AGG | - | chr7_3:51353564-51353583 | Msa1108450:intron | 30.0% | |
| ACATACTCTCTAATCCTTAT+AGG | + | chr7_3:51353581-51353600 | None:intergenic | 30.0% | |
| ! | ACATTGTGTTTTCACAAACT+AGG | + | chr7_3:51353610-51353629 | None:intergenic | 30.0% |
| AACGTCATTCAAATTGCAAA+AGG | - | chr7_3:51353790-51353809 | Msa1108450:CDS | 30.0% | |
| GTTTGATTGTTGTATTTGTG+CGG | - | chr7_3:51353841-51353860 | Msa1108450:intron | 30.0% | |
| TAATGAATGAAGACAAGATC+AGG | + | chr7_3:51353954-51353973 | None:intergenic | 30.0% | |
| ! | TTGTCTAAAGTAGGAAAAAG+CGG | + | chr7_3:51354497-51354516 | None:intergenic | 30.0% |
| CTCATATTACATGTCTCTTA+AGG | - | chr7_3:51354614-51354633 | Msa1108450:intron | 30.0% | |
| !!! | AATGTAGAAGGTTTTGAGTA+AGG | + | chr7_3:51354798-51354817 | None:intergenic | 30.0% |
| GATAATATCCAAATAGAACC+TGG | - | chr7_3:51354912-51354931 | Msa1108450:intron | 30.0% | |
| TAAGAGAATTTCTTCGTCAA+GGG | - | chr7_3:51355004-51355023 | Msa1108450:intron | 30.0% | |
| ATCAGTAAAATCTAGACCTT+GGG | - | chr7_3:51355388-51355407 | Msa1108450:intron | 30.0% | |
| AGTGATTTCTTCAAATTTGG+AGG | + | chr7_3:51355449-51355468 | None:intergenic | 30.0% | |
| CTAGCAATACTAAATCTAGA+AGG | - | chr7_3:51355543-51355562 | Msa1108450:intron | 30.0% | |
| ATGATTATTGTGAGTAAACC+CGG | + | chr7_3:51355603-51355622 | None:intergenic | 30.0% | |
| ! | TTTTTGTCCCAATTACAACA+GGG | + | chr7_3:51355679-51355698 | None:intergenic | 30.0% |
| ! | ATTTTTGTCCCAATTACAAC+AGG | + | chr7_3:51355680-51355699 | None:intergenic | 30.0% |
| TGTTGTAATTGGGACAAAAA+TGG | - | chr7_3:51355679-51355698 | Msa1108450:intron | 30.0% | |
| TCTTATGGAAAATCTTCAAC+TGG | - | chr7_3:51355770-51355789 | Msa1108450:intron | 30.0% | |
| TACAAAATCAGTAGTGTTGT+AGG | + | chr7_3:51355891-51355910 | None:intergenic | 30.0% | |
| GTATACTTCCTTGAAGTAAA+AGG | - | chr7_3:51355975-51355994 | Msa1108450:intron | 30.0% | |
| ! | GTTATTTGCCTTTTACTTCA+AGG | + | chr7_3:51355986-51356005 | None:intergenic | 30.0% |
| TATGGTAATAACAGAGGAAA+TGG | - | chr7_3:51356030-51356049 | Msa1108450:intron | 30.0% | |
| AATCTCACTTCCATAAGATA+TGG | + | chr7_3:51356630-51356649 | None:intergenic | 30.0% | |
| !! | GCTATTTTATTTGTATGTGG+TGG | - | chr7_3:51356729-51356748 | Msa1108450:five_prime_UTR | 30.0% |
| ATACCAAGTAAATGTGCTAA+TGG | - | chr7_3:51356777-51356796 | Msa1108450:five_prime_UTR | 30.0% | |
| ! | AAACCATATAAGCTTGTTTG+TGG | - | chr7_3:51356856-51356875 | Msa1108450:five_prime_UTR | 30.0% |
| ATGAAGAACTATGCTAGTGT+TGG | + | chr7_3:51352722-51352741 | None:intergenic | 35.0% | |
| !! | GAACTTGATTTGTCCAACTT+AGG | - | chr7_3:51353113-51353132 | Msa1108450:intron | 35.0% |
| AGGTCCCATAAATTTCATGT+GGG | + | chr7_3:51353561-51353580 | None:intergenic | 35.0% | |
| TAGGTCCCATAAATTTCATG+TGG | + | chr7_3:51353562-51353581 | None:intergenic | 35.0% | |
| AGACAAGATCAGGAACATAA+AGG | + | chr7_3:51353944-51353963 | None:intergenic | 35.0% | |
| ! | GACAAGAGTTTTCTGTTATC+AGG | - | chr7_3:51354450-51354469 | Msa1108450:CDS | 35.0% |
| !! | GCTTTTTCCTACTTTAGACA+AGG | - | chr7_3:51354496-51354515 | Msa1108450:CDS | 35.0% |
| ! | TGTGTTTCCTTGTCTAAAGT+AGG | + | chr7_3:51354506-51354525 | None:intergenic | 35.0% |
| AATGCCATTGAAGAGTGAAA+CGG | - | chr7_3:51354526-51354545 | Msa1108450:CDS | 35.0% | |
| !! | TCCAACTGCTTTAAAGCTAA+GGG | - | chr7_3:51354565-51354584 | Msa1108450:intron | 35.0% |
| AGACATGTAATATGAGACAG+AGG | + | chr7_3:51354610-51354629 | None:intergenic | 35.0% | |
| TCACCTAACTGCTATTGATA+GGG | + | chr7_3:51354715-51354734 | None:intergenic | 35.0% | |
| TTCACCTAACTGCTATTGAT+AGG | + | chr7_3:51354716-51354735 | None:intergenic | 35.0% | |
| GTAAGGTAGAAGAATCAAAG+AGG | + | chr7_3:51354781-51354800 | None:intergenic | 35.0% | |
| ATAAACCTTTCTTGTGTTGC+AGG | - | chr7_3:51354887-51354906 | Msa1108450:intron | 35.0% | |
| TTCTTGAACCAGGTTCTATT+TGG | + | chr7_3:51354923-51354942 | None:intergenic | 35.0% | |
| ! | CATGCATCAATGTCAAGTTT+TGG | - | chr7_3:51354963-51354982 | Msa1108450:CDS | 35.0% |
| !!! | AGTTTTGGTTCTTCCACTAA+TGG | - | chr7_3:51354978-51354997 | Msa1108450:CDS | 35.0% |
| AATTCTCTTACTGCCATTAG+TGG | + | chr7_3:51354994-51355013 | None:intergenic | 35.0% | |
| GTAAGAGAATTTCTTCGTCA+AGG | - | chr7_3:51355003-51355022 | Msa1108450:intron | 35.0% | |
| AAGAGAATTTCTTCGTCAAG+GGG | - | chr7_3:51355005-51355024 | Msa1108450:intron | 35.0% | |
| TTCGTTGTTGAAGGTAATGT+TGG | + | chr7_3:51355074-51355093 | None:intergenic | 35.0% | |
| !! | GGTGTTGATGATCGAATATT+AGG | + | chr7_3:51355263-51355282 | None:intergenic | 35.0% |
| ! | CAAGGTCTAGATTTTACTGA+TGG | + | chr7_3:51355389-51355408 | None:intergenic | 35.0% |
| CATCAGTAAAATCTAGACCT+TGG | - | chr7_3:51355387-51355406 | Msa1108450:intron | 35.0% | |
| GGCAGTGATTTCTTCAAATT+TGG | + | chr7_3:51355452-51355471 | None:intergenic | 35.0% | |
| AAGAAAGCCCTGTTGTAATT+GGG | - | chr7_3:51355669-51355688 | Msa1108450:intron | 35.0% | |
| ! | AAGAATTGTTGTTGGCAGAA+GGG | + | chr7_3:51355754-51355773 | None:intergenic | 35.0% |
| ! | TAAGAATTGTTGTTGGCAGA+AGG | + | chr7_3:51355755-51355774 | None:intergenic | 35.0% |
| TCTGCCAACAACAATTCTTA+TGG | - | chr7_3:51355755-51355774 | Msa1108450:intron | 35.0% | |
| AGTCTTTAGATATGGCAATG+AGG | - | chr7_3:51355825-51355844 | Msa1108450:intron | 35.0% | |
| GCTCTATATGGTAATAACAG+AGG | - | chr7_3:51356024-51356043 | Msa1108450:intron | 35.0% | |
| !! | GTTGATGATTTCTCTTATGC+AGG | - | chr7_3:51356430-51356449 | Msa1108450:CDS | 35.0% |
| TTTCTCTTATGCAGGACATA+AGG | - | chr7_3:51356438-51356457 | Msa1108450:CDS | 35.0% | |
| AATCATCAGGACTCATATGA+TGG | - | chr7_3:51356681-51356700 | Msa1108450:five_prime_UTR | 35.0% | |
| CTACCATTAGCACATTTACT+TGG | + | chr7_3:51356783-51356802 | None:intergenic | 35.0% | |
| GTACCACAAACAAGCTTATA+TGG | + | chr7_3:51356862-51356881 | None:intergenic | 35.0% | |
| TGAATAACAAGGTAGCTGAG+TGG | + | chr7_3:51352690-51352709 | None:intergenic | 40.0% | |
| GGATAGAGAGGTGAATAACA+AGG | + | chr7_3:51352701-51352720 | None:intergenic | 40.0% | |
| ! | TATGCTAGTGTTGGATAGAG+AGG | + | chr7_3:51352713-51352732 | None:intergenic | 40.0% |
| !! | TAGAAGGTGCTAGATAGAGA+AGG | - | chr7_3:51352983-51353002 | Msa1108450:CDS | 40.0% |
| GTGCTAGATAGAGAAGGTAA+TGG | - | chr7_3:51352989-51353008 | Msa1108450:CDS | 40.0% | |
| ! | AGAGAAGGTAATGGTGATGA+AGG | - | chr7_3:51352998-51353017 | Msa1108450:CDS | 40.0% |
| ! | TTGCTTTGTTCCTTGAGATG+AGG | - | chr7_3:51353036-51353055 | Msa1108450:intron | 40.0% |
| TCTTCAACCACAGTCTTCTT+TGG | + | chr7_3:51353274-51353293 | None:intergenic | 40.0% | |
| AAGGCCCCACATGAAATTTA+TGG | - | chr7_3:51353553-51353572 | Msa1108450:intron | 40.0% | |
| AGGCCCCACATGAAATTTAT+GGG | - | chr7_3:51353554-51353573 | Msa1108450:intron | 40.0% | |
| GGTCCCATAAATTTCATGTG+GGG | + | chr7_3:51353560-51353579 | None:intergenic | 40.0% | |
| ! | CCAAAGCTTAAGAGCATGTT+TGG | + | chr7_3:51353689-51353708 | None:intergenic | 40.0% |
| CCAAACATGCTCTTAAGCTT+TGG | - | chr7_3:51353686-51353705 | Msa1108450:CDS | 40.0% | |
| !! | TGCTCTTAAGCTTTGGAATG+TGG | - | chr7_3:51353693-51353712 | Msa1108450:CDS | 40.0% |
| AAGATCAGGAACATAAAGGC+TGG | + | chr7_3:51353940-51353959 | None:intergenic | 40.0% | |
| GATTAAGTGCAAACTTTCCG+CGG | - | chr7_3:51354203-51354222 | Msa1108450:CDS | 40.0% | |
| GAAAACTCTTGTCAGTGTGA+AGG | + | chr7_3:51354443-51354462 | None:intergenic | 40.0% | |
| !! | GTCCAACTGCTTTAAAGCTA+AGG | - | chr7_3:51354564-51354583 | Msa1108450:intron | 40.0% |
| !! | ACCCTTAGCTTTAAAGCAGT+TGG | + | chr7_3:51354569-51354588 | None:intergenic | 40.0% |
| TCTTAAGGTTACACACACAG+AGG | - | chr7_3:51354629-51354648 | Msa1108450:intron | 40.0% | |
| TACCCCTATCAATAGCAGTT+AGG | - | chr7_3:51354709-51354728 | Msa1108450:intron | 40.0% | |
| CACCTAACTGCTATTGATAG+GGG | + | chr7_3:51354714-51354733 | None:intergenic | 40.0% | |
| ATCTACCTGCAACACAAGAA+AGG | + | chr7_3:51354895-51354914 | None:intergenic | 40.0% | |
| ACTACATTGCTTCTTGAACC+AGG | + | chr7_3:51354933-51354952 | None:intergenic | 40.0% | |
| GTTGAAGATCTTGAAGTAGC+TGG | + | chr7_3:51355038-51355057 | None:intergenic | 40.0% | |
| TCAAGATCTTCAACTCCATC+TGG | - | chr7_3:51355044-51355063 | Msa1108450:intron | 40.0% | |
| TGACTTCGTAGAAGTTAACG+TGG | + | chr7_3:51355129-51355148 | None:intergenic | 40.0% | |
| !! | GCTGATCTTTGAGATGTCTT+AGG | + | chr7_3:51355236-51355255 | None:intergenic | 40.0% |
| GTAAATCCAGGCATTTGTGA+GGG | + | chr7_3:51355416-51355435 | None:intergenic | 40.0% | |
| AGTAAATCCAGGCATTTGTG+AGG | + | chr7_3:51355417-51355436 | None:intergenic | 40.0% | |
| !! | CTATTTCTAGTGACTGAAGC+CGG | + | chr7_3:51355482-51355501 | None:intergenic | 40.0% |
| ACAGAAGCTGATCTTGAACT+CGG | + | chr7_3:51355515-51355534 | None:intergenic | 40.0% | |
| TTCAAGATCAGCTTCTGTTG+AGG | - | chr7_3:51355517-51355536 | Msa1108450:intron | 40.0% | |
| GAAGAAAGCCCTGTTGTAAT+TGG | - | chr7_3:51355668-51355687 | Msa1108450:intron | 40.0% | |
| AAATCTTCAACTGGTAGCTC+TGG | - | chr7_3:51355779-51355798 | Msa1108450:intron | 40.0% | |
| AGATATGGCAATGAGGCATA+TGG | - | chr7_3:51355832-51355851 | Msa1108450:intron | 40.0% | |
| TTAGAGAACAAGTAGGAGCA+TGG | + | chr7_3:51356061-51356080 | None:intergenic | 40.0% | |
| TCTATGTACAGTGTGAGATC+AGG | - | chr7_3:51356512-51356531 | Msa1108450:intron | 40.0% | |
| GGCACAAATAGCACAGATAT+TGG | - | chr7_3:51356750-51356769 | Msa1108450:five_prime_UTR | 40.0% | |
| CTTTGTTCCTTGAGATGAGG+AGG | - | chr7_3:51353039-51353058 | Msa1108450:intron | 45.0% | |
| AGTTCCACCAAAGAAGACTG+TGG | - | chr7_3:51353264-51353283 | Msa1108450:intron | 45.0% | |
| TCAACCACAGTCTTCTTTGG+TGG | + | chr7_3:51353271-51353290 | None:intergenic | 45.0% | |
| AGGAACATAAAGGCTGGATG+TGG | + | chr7_3:51353934-51353953 | None:intergenic | 45.0% | |
| !! | ACTTGTTTCTGATTCCTCCG+CGG | + | chr7_3:51354223-51354242 | None:intergenic | 45.0% |
| GTAGGAAAAAGCGGTGTATC+AGG | + | chr7_3:51354488-51354507 | None:intergenic | 45.0% | |
| GTCTCCGTTTCACTCTTCAA+TGG | + | chr7_3:51354533-51354552 | None:intergenic | 45.0% | |
| GATCTTGAAGTAGCTGGAGA+TGG | + | chr7_3:51355032-51355051 | None:intergenic | 45.0% | |
| GATCTTCAACTCCATCTGGA+AGG | - | chr7_3:51355048-51355067 | Msa1108450:intron | 45.0% | |
| CTCGAGGATTTCGTTGTTGA+AGG | + | chr7_3:51355083-51355102 | None:intergenic | 45.0% | |
| CTTCAACAACGAAATCCTCG+AGG | - | chr7_3:51355081-51355100 | Msa1108450:intron | 45.0% | |
| AGATGTCTTAGGAGCTGTCA+AGG | + | chr7_3:51355225-51355244 | None:intergenic | 45.0% | |
| TTCGATCATCAACACCATCG+AGG | - | chr7_3:51355267-51355286 | Msa1108450:intron | 45.0% | |
| TCAACACCATCGAGGACATT+TGG | - | chr7_3:51355275-51355294 | Msa1108450:intron | 45.0% | |
| GATACTCCAAATGTCCTCGA+TGG | + | chr7_3:51355284-51355303 | None:intergenic | 45.0% | |
| CCGGATTCTTAGCAACAACA+GGG | + | chr7_3:51355346-51355365 | None:intergenic | 45.0% | |
| CCCTGTTGTTGCTAAGAATC+CGG | - | chr7_3:51355343-51355362 | Msa1108450:intron | 45.0% | |
| ACCGGATTCTTAGCAACAAC+AGG | + | chr7_3:51355347-51355366 | None:intergenic | 45.0% | |
| GAAATCACTGCCAGAAAGAC+CGG | - | chr7_3:51355460-51355479 | Msa1108450:intron | 45.0% | |
| CGGCTTCAGTCACTAGAAAT+AGG | - | chr7_3:51355480-51355499 | Msa1108450:intron | 45.0% | |
| TCAGTCACTAGAAATAGGCC+TGG | - | chr7_3:51355485-51355504 | Msa1108450:intron | 45.0% | |
| AGGGCTTTCTTCATCACCAT+CGG | + | chr7_3:51355660-51355679 | None:intergenic | 45.0% | |
| !! | TCAACTGGTAGCTCTGGATT+CGG | - | chr7_3:51355785-51355804 | Msa1108450:intron | 45.0% |
| ! | GAAGCGTTCAGGGTAATATG+CGG | - | chr7_3:51356462-51356481 | Msa1108450:exon | 45.0% |
| ACACTGTACATAGACGAAGC+TGG | + | chr7_3:51356506-51356525 | None:intergenic | 45.0% | |
| CAGGTAGTTCATCTAAGAGC+AGG | - | chr7_3:51356531-51356550 | Msa1108450:intron | 45.0% | |
| CAGGACTCATATGATGGTCA+AGG | - | chr7_3:51356687-51356706 | Msa1108450:five_prime_UTR | 45.0% | |
| !! | ATCAATATATATTAATATTA+AGG | + | chr7_3:51354176-51354195 | None:intergenic | 5.0% |
| TCTCTCTCCTCCTCATCTCA+AGG | + | chr7_3:51353049-51353068 | None:intergenic | 50.0% | |
| GTGGGGCCTTCATGATTTAG+TGG | + | chr7_3:51353543-51353562 | None:intergenic | 50.0% | |
| ! | GGTGCTGAGTGCTTTGTCAA+AGG | - | chr7_3:51354066-51354085 | Msa1108450:CDS | 50.0% |
| TAAGTGCAAACTTTCCGCGG+AGG | - | chr7_3:51354206-51354225 | Msa1108450:CDS | 50.0% | |
| GGAAAAAGCGGTGTATCAGG+TGG | + | chr7_3:51354485-51354504 | None:intergenic | 50.0% | |
| !! | GGTAATGTTGGCCTTCCAGA+TGG | + | chr7_3:51355062-51355081 | None:intergenic | 50.0% |
| !! | GGAGTTGATGATCTCACTGG+TGG | + | chr7_3:51355158-51355177 | None:intergenic | 50.0% |
| !! | GTGGGAGTTGATGATCTCAC+TGG | + | chr7_3:51355161-51355180 | None:intergenic | 50.0% |
| ! | AGGCCTTGAAGTAGGTGTTG+AGG | + | chr7_3:51355201-51355220 | None:intergenic | 50.0% |
| GTCAAGGAAGGCCTTGAAGT+AGG | + | chr7_3:51355209-51355228 | None:intergenic | 50.0% | |
| GTCTTAGGAGCTGTCAAGGA+AGG | + | chr7_3:51355221-51355240 | None:intergenic | 50.0% | |
| ! | CGTGCTTTTGATGCTGACGA+AGG | + | chr7_3:51355323-51355342 | None:intergenic | 50.0% |
| ! | GGAGCGTCATGAGTAAATCC+AGG | + | chr7_3:51355428-51355447 | None:intergenic | 50.0% |
| GATCTTGAACTCGGAACTCC+AGG | + | chr7_3:51355506-51355525 | None:intergenic | 50.0% | |
| CAGTCCAACACACCTTCGAA+AGG | - | chr7_3:51355566-51355585 | Msa1108450:intron | 50.0% | |
| ! | ACGTCCTTTCGAAGGTGTGT+TGG | + | chr7_3:51355573-51355592 | None:intergenic | 50.0% |
| AGTAGAGCTCGTTTCACCGA+TGG | - | chr7_3:51355641-51355660 | Msa1108450:intron | 50.0% | |
| GAAGGGTCGTTATGCTTTGG+TGG | + | chr7_3:51355737-51355756 | None:intergenic | 50.0% | |
| GCAGAAGGGTCGTTATGCTT+TGG | + | chr7_3:51355740-51355759 | None:intergenic | 50.0% | |
| ! | GACATAAGGCGAAGCGTTCA+GGG | - | chr7_3:51356452-51356471 | Msa1108450:CDS | 50.0% |
| GGGCCTCAACACCTACTTCA+AGG | - | chr7_3:51355195-51355214 | Msa1108450:intron | 55.0% | |
| GATGCTGACGAAGGTCGAGT+AGG | + | chr7_3:51355314-51355333 | None:intergenic | 55.0% | |
| AAGAATCCGGTGCAGTCACG+TGG | - | chr7_3:51355356-51355375 | Msa1108450:intron | 55.0% | |
| GGCATTTGTGAGGGTTCCCA+AGG | + | chr7_3:51355407-51355426 | None:intergenic | 55.0% | |
| TGGGAACCCTCACAAATGCC+TGG | - | chr7_3:51355407-51355426 | Msa1108450:intron | 55.0% | |
| GTGACTGAAGCCGGTCTTTC+TGG | + | chr7_3:51355473-51355492 | None:intergenic | 55.0% | |
| GCTGAAGCACGTCCTTTCGA+AGG | + | chr7_3:51355581-51355600 | None:intergenic | 55.0% | |
| TCGAAAGGACGTGCTTCAGC+CGG | - | chr7_3:51355581-51355600 | Msa1108450:intron | 55.0% | |
| ! | GGACATAAGGCGAAGCGTTC+AGG | - | chr7_3:51356451-51356470 | Msa1108450:CDS | 55.0% |
| GCTGGAATGCTTGTCACGTG+TGG | + | chr7_3:51356488-51356507 | None:intergenic | 55.0% | |
| GCTTGTGGCATGTGGCGAAT+CGG | + | chr7_3:51356570-51356589 | None:intergenic | 55.0% | |
| !! | AGAGCTAGCAGTGCTGCTTG+TGG | + | chr7_3:51356585-51356604 | None:intergenic | 55.0% |
| AGAAGTTAACGTGGCCCGCG+AGG | + | chr7_3:51355120-51355139 | None:intergenic | 60.0% | |
| TCCCACTAGACCCGCTTCGA+GGG | - | chr7_3:51355175-51355194 | Msa1108450:intron | 60.0% | |
| !! | AGGTGTTGAGGCCCTCGAAG+CGG | + | chr7_3:51355189-51355208 | None:intergenic | 60.0% |
| GCTGACGAAGGTCGAGTAGG+AGG | + | chr7_3:51355311-51355330 | None:intergenic | 60.0% | |
| GAGATGCCACGTGACTGCAC+CGG | + | chr7_3:51355365-51355384 | None:intergenic | 60.0% | |
| CGAAAGGACGTGCTTCAGCC+GGG | - | chr7_3:51355582-51355601 | Msa1108450:intron | 60.0% | |
| !! | GCAGTGCTGCTTGTGGCATG+TGG | + | chr7_3:51356578-51356597 | None:intergenic | 60.0% |
| GGTAGGTGTAGAGGGCCTCG+AGG | + | chr7_3:51355099-51355118 | None:intergenic | 65.0% | |
| GGCCCTCTACACCTACCTCG+CGG | - | chr7_3:51355102-51355121 | Msa1108450:intron | 65.0% | |
| GCCCTCTACACCTACCTCGC+GGG | - | chr7_3:51355103-51355122 | Msa1108450:intron | 65.0% | |
| GCCCGCGAGGTAGGTGTAGA+GGG | + | chr7_3:51355107-51355126 | None:intergenic | 65.0% | |
| GTTAACGTGGCCCGCGAGGT+AGG | + | chr7_3:51355116-51355135 | None:intergenic | 65.0% | |
| CTCCCACTAGACCCGCTTCG+AGG | - | chr7_3:51355174-51355193 | Msa1108450:intron | 65.0% | |
| GCCCTCGAAGCGGGTCTAGT+GGG | + | chr7_3:51355179-51355198 | None:intergenic | 65.0% | |
| ! | GGTGTTGAGGCCCTCGAAGC+GGG | + | chr7_3:51355188-51355207 | None:intergenic | 65.0% |
| GGCCCGCGAGGTAGGTGTAG+AGG | + | chr7_3:51355108-51355127 | None:intergenic | 70.0% | |
| GGCCCTCGAAGCGGGTCTAG+TGG | + | chr7_3:51355180-51355199 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 51352532 | 51356947 | 51352532 | ID=Msa1108450;Name=Msa1108450 |
| chr7_3 | mRNA | 51352532 | 51356947 | 51352532 | ID=Msa1108450-mRNA-1;Parent=Msa1108450;Name=Msa1108450-mRNA-1;_AED=0.27;_eAED=0.27;_QI=294|0.57|0.5|1|0.42|0.25|8|280|478 |
| chr7_3 | exon | 51352532 | 51353027 | 51352532 | ID=Msa1108450-mRNA-1:exon:10542;Parent=Msa1108450-mRNA-1 |
| chr7_3 | exon | 51353626 | 51353854 | 51353626 | ID=Msa1108450-mRNA-1:exon:10541;Parent=Msa1108450-mRNA-1 |
| chr7_3 | exon | 51353876 | 51354108 | 51353876 | ID=Msa1108450-mRNA-1:exon:10540;Parent=Msa1108450-mRNA-1 |
| chr7_3 | exon | 51354115 | 51354566 | 51354115 | ID=Msa1108450-mRNA-1:exon:10539;Parent=Msa1108450-mRNA-1 |
| chr7_3 | exon | 51354940 | 51355007 | 51354940 | ID=Msa1108450-mRNA-1:exon:10538;Parent=Msa1108450-mRNA-1 |
| chr7_3 | exon | 51356147 | 51356258 | 51356147 | ID=Msa1108450-mRNA-1:exon:10537;Parent=Msa1108450-mRNA-1 |
| chr7_3 | exon | 51356345 | 51356493 | 51356345 | ID=Msa1108450-mRNA-1:exon:10536;Parent=Msa1108450-mRNA-1 |
| chr7_3 | exon | 51356676 | 51356947 | 51356676 | ID=Msa1108450-mRNA-1:exon:10535;Parent=Msa1108450-mRNA-1 |
| chr7_3 | five_prime_UTR | 51356676 | 51356947 | 51356676 | ID=Msa1108450-mRNA-1:five_prime_utr;Parent=Msa1108450-mRNA-1 |
| chr7_3 | five_prime_UTR | 51356472 | 51356493 | 51356472 | ID=Msa1108450-mRNA-1:five_prime_utr;Parent=Msa1108450-mRNA-1 |
| chr7_3 | CDS | 51356345 | 51356471 | 51356345 | ID=Msa1108450-mRNA-1:cds;Parent=Msa1108450-mRNA-1 |
| chr7_3 | CDS | 51356147 | 51356258 | 51356147 | ID=Msa1108450-mRNA-1:cds;Parent=Msa1108450-mRNA-1 |
| chr7_3 | CDS | 51354940 | 51355007 | 51354940 | ID=Msa1108450-mRNA-1:cds;Parent=Msa1108450-mRNA-1 |
| chr7_3 | CDS | 51354115 | 51354566 | 51354115 | ID=Msa1108450-mRNA-1:cds;Parent=Msa1108450-mRNA-1 |
| chr7_3 | CDS | 51353876 | 51354108 | 51353876 | ID=Msa1108450-mRNA-1:cds;Parent=Msa1108450-mRNA-1 |
| chr7_3 | CDS | 51353626 | 51353854 | 51353626 | ID=Msa1108450-mRNA-1:cds;Parent=Msa1108450-mRNA-1 |
| chr7_3 | CDS | 51352812 | 51353027 | 51352812 | ID=Msa1108450-mRNA-1:cds;Parent=Msa1108450-mRNA-1 |
| chr7_3 | three_prime_UTR | 51352532 | 51352811 | 51352532 | ID=Msa1108450-mRNA-1:three_prime_utr;Parent=Msa1108450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
